Parallelism, deep homology, and evo-devo
SUMMARY Parallelism has been the subject of a number of recent studies that have resulted in reassessment of the term and the process. Parallelism has been aligned with homology leaving convergence as the only case of homoplasy, regarded as a transition between homologous and convergent characters,...
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Published in | Evolution & development Vol. 14; no. 1; pp. 29 - 33 |
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Format | Journal Article |
Language | English |
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United States
Blackwell Publishing Ltd
01.01.2012
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Abstract | SUMMARY
Parallelism has been the subject of a number of recent studies that have resulted in reassessment of the term and the process. Parallelism has been aligned with homology leaving convergence as the only case of homoplasy, regarded as a transition between homologous and convergent characters, and defined as the independent evolution of genetic traits. Another study advocates abolishing the term parallelism and treating all cases of the independent evolution of characters as convergence. With the sophistication of modern genomics and genetic analysis, parallelism of characters of the phenotype is being discovered to reflect parallel genetic evolution. Approaching parallelism from developmental and genetic perspectives enables us to tease out the degree to which the reuse of pathways represent deep homology and is a major task for evolutionary developmental biology in the coming decades. |
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AbstractList | Parallelism has been the subject of a number of recent studies that have resulted in reassessment of the term and the process. Parallelism has been aligned with homology leaving convergence as the only case of homoplasy, regarded as a transition between homologous and convergent characters, and defined as the independent evolution of genetic traits. Another study advocates abolishing the term parallelism and treating all cases of the independent evolution of characters as convergence. With the sophistication of modern genomics and genetic analysis, parallelism of characters of the phenotype is being discovered to reflect parallel genetic evolution. Approaching parallelism from developmental and genetic perspectives enables us to tease out the degree to which the reuse of pathways represent deep homology and is a major task for evolutionary developmental biology in the coming decades.Parallelism has been the subject of a number of recent studies that have resulted in reassessment of the term and the process. Parallelism has been aligned with homology leaving convergence as the only case of homoplasy, regarded as a transition between homologous and convergent characters, and defined as the independent evolution of genetic traits. Another study advocates abolishing the term parallelism and treating all cases of the independent evolution of characters as convergence. With the sophistication of modern genomics and genetic analysis, parallelism of characters of the phenotype is being discovered to reflect parallel genetic evolution. Approaching parallelism from developmental and genetic perspectives enables us to tease out the degree to which the reuse of pathways represent deep homology and is a major task for evolutionary developmental biology in the coming decades. Parallelism has been the subject of a number of recent studies that have resulted in reassessment of the term and the process. Parallelism has been aligned with homology leaving convergence as the only case of homoplasy, regarded as a transition between homologous and convergent characters, and defined as the independent evolution of genetic traits. Another study advocates abolishing the term parallelism and treating all cases of the independent evolution of characters as convergence. With the sophistication of modern genomics and genetic analysis, parallelism of characters of the phenotype is being discovered to reflect parallel genetic evolution. Approaching parallelism from developmental and genetic perspectives enables us to tease out the degree to which the reuse of pathways represent deep homology and is a major task for evolutionary developmental biology in the coming decades. SUMMARY Parallelism has been the subject of a number of recent studies that have resulted in reassessment of the term and the process. Parallelism has been aligned with homology leaving convergence as the only case of homoplasy, regarded as a transition between homologous and convergent characters, and defined as the independent evolution of genetic traits. Another study advocates abolishing the term parallelism and treating all cases of the independent evolution of characters as convergence. With the sophistication of modern genomics and genetic analysis, parallelism of characters of the phenotype is being discovered to reflect parallel genetic evolution. Approaching parallelism from developmental and genetic perspectives enables us to tease out the degree to which the reuse of pathways represent deep homology and is a major task for evolutionary developmental biology in the coming decades. SUMMARY Parallelism has been the subject of a number of recent studies that have resulted in reassessment of the term and the process. Parallelism has been aligned with homology leaving convergence as the only case of homoplasy, regarded as a transition between homologous and convergent characters, and defined as the independent evolution of genetic traits. Another study advocates abolishing the term parallelism and treating all cases of the independent evolution of characters as convergence. With the sophistication of modern genomics and genetic analysis, parallelism of characters of the phenotype is being discovered to reflect parallel genetic evolution. Approaching parallelism from developmental and genetic perspectives enables us to tease out the degree to which the reuse of pathways represent deep homology and is a major task for evolutionary developmental biology in the coming decades. [PUBLICATION ABSTRACT] |
Author | Hall, Brian K. |
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References | Hall, B. K. 2007a. Homoplasy and homology: dichotomy or Continuum? J. Hum. Evol. 52: 473-479. Cole, A. G. 2011. A review of diversity in the evolution and development of cartilage; the search for the origin of the chondrocyte. Eur. Cells Mater. 21: 122-129. Franz-Odendaal, T. A., and Hall, B. K. 2006. Modularity and sense organs in the blind cavefish, Astyanax mexicanus. Evol. Dev. 8: 94-100. Hall, B. K. 1999. Evolutionary Developmental Biology. 2nd Ed. Kluwer Academic Publishers, the Netherlands. Hall, B. K. 2003. Descent with modification: the unity underlying homology and homoplasy as seen through an analysis of development and evolution. Biol. Rev. Camb. Philos. Soc. 78: 409-433. Goode, J.,(ed.) 2007. Tinkering: The Microevolution of Development. Novartis Foundation Symposium No. 284. John Wiley and Sons, Chichester, England. Darwin, C. 1871. The Descent of Man, and Selection in Relation to Sex. Murray, London. Huang, J. K., Dorey, K., Ishibashi, S., and Amaya, E. 2007. BDNF promotes target innervation of Xenopus mandibular trigeminal axons in vivo. BMC Dev. Biol. 7: 59 (doi: 10.1186/1471-213X-7-59). Scotland, R. W. 2010. Deep homology: a view from systematics. BioEssays 32: 438-449. Cole, A. G., and Hall, B. K. 2009. Cartilage differentiation in cephalopod molluscs. Zoology 112: 2-15. Cole, A. G., and Hall, B. K. 2004a. Cartilage is a metazoan tissue; integrating data from non-vertebrate sources. Acta Zool. 85: 69-80. Gould, S. J. 2002. The Structure of Evolutionary Theory. The Belknap Press of Harvard University Press, Cambridge, MA. Lankester, E. R. 1870. On the use of the term homology in modern zoology, and the distinction between homogenetic and homoplastic agreements. Ann. Mag. Nat. Hist., 6 (Ser. 4): 34-43. Darwin, C. 1859. On the Origin of Species by Means of Natural Selection or the Preservation of Favoured Races in the Struggle for Life. Murray, London. Owen, R. 1843. Lectures on Comparative Anatomy and Physiology of the Invertebrate Animals, Delivered at the Royal College of Surgeons in 1843. Longmans, Brown, Green and Longmans, London. Jacob, F. 1977. Evolution and tinkering. Science 196: 1161-1166. Hoekstra, H. E., and Coyne, J. A. 2007. The locus of evolution: evo devo and the genetics of adaptation. Evolution 61: 995-1016 Abouheif, E. 2008. Parallelism as the pattern and process of mesoevolution. Evol. Dev. 10: 3-5. Hoekstra, H. E., Hirschmann, R. J., Bundey, R. A., Insel, P. A., and Crossland, J. P. 2006. A single amino acid mutation contributes to adaptive beach mouse color pattern. Science 313: 101-104 Hall, B. K. 2005. Bones and Cartilage: Developmental and Evolutionary Skeletal Biology. Elsevier Academic Press, London, pp. 787. Jeffrey, W. R. 2007. Chordate ancestry of the neural crest: new insights. Semin. Cell Dev. Biol. 18: 481-491. Brakefield, P. 2006. Evo-devo and constraints on selection. Trends Ecol. Evol. 21: 363-368. Shubin, N., Tabin, C., and Carroll, S.B. 2009. Deep homology and the origins of evolutionary novelty. Nature 388: 639-648. Satoh, N. 2009. An advanced filter-feeder hypothesis for urochordate evolution. Zool. Sci. 26: 97-111. Cole, A. G., and Hall, B. K. 2004b. The nature and significance of invertebrate cartilages revisited: distribution and histology of cartilage and cartilage-like tissues within the Metazoa. Zoology 107: 261-274. Scotland, R. W. 2011. What is parallelism? Evol. Dev. 13: 214-227. Kemp, T. S. 2005. The Origin and Evolution of Mammals. Oxford University Press, Oxford and New York. Wake, D. B., Wake, M. H., and Specht, C. D. 2011. Homoplasy: from detecting pattern to determining process and mechanism of evolution. Science 331:1032-1035. Kemp, T. S. 2007. The origin of higher taxa: macroevolutionary processes, and the case of the mammals. Acta Zool. 88: 3-22. Pottin, K., Hyacinthe, C., and Rétaux, R. 2010. Conservation, development, and function of a cement gland-like structure in the fish Astyanax mexicanus. Proc. Natl. Acad. Sci. USA 107: 17256-17261. (doi: 10.1073/pnas.1005035107). Owen, R. 1848. On the Archetype and Homologies of the Vertebrate Skeleton. Jon van Voorst, London. Arendt, J., and Reznick, D. 2007. Convergence and parallelism reconsidered: what have we learned about the genetics of adaptation? Cell 23: 26-32. Hall, B. K. 2009. The Neural Crest and Neural Crest Cells in Vertebrate Development and Evolution. Springer, New York, pp. xxii +400. Hall, B. K. 2010. Evolution; Principles and Processes. Jones and Bartlett, Publishers, Sudbury, MA. 2004b; 107 2007; 18 2007; 104 2010; 32 2010; 107 2010 2004a; 85 2009 2006; 8 2009; 112 2007 2007a; 52 2008; 10 2005 2011; 13 1871 2002 2006; 313 1859 2009; 26 2011; 331 1999 2003; 78 2006; 21 2007b 1870; 4 1843 2011; 21 2007; 7 2009; 388 2007; 61 2007; 88 2007; 23 1848 1977; 196 e_1_2_6_32_1 e_1_2_6_31_1 e_1_2_6_30_1 Goode J. (e_1_2_6_12_1) 2007 e_1_2_6_19_1 Lieberman D. (e_1_2_6_29_1) 2007 Shubin N. (e_1_2_6_38_1) 2009; 388 e_1_2_6_13_1 e_1_2_6_36_1 e_1_2_6_14_1 e_1_2_6_35_1 e_1_2_6_11_1 e_1_2_6_34_1 Hall B. K. (e_1_2_6_16_1) 2005 e_1_2_6_33_1 Arendt J. (e_1_2_6_3_1) 2007; 23 Cole A. G. (e_1_2_6_5_1) 2011; 21 e_1_2_6_17_1 e_1_2_6_18_1 e_1_2_6_39_1 e_1_2_6_15_1 Lankester E. R. (e_1_2_6_28_1) 1870; 4 e_1_2_6_37_1 Brakefield P. (e_1_2_6_4_1) 2006; 21 e_1_2_6_21_1 e_1_2_6_40_1 Darwin C. (e_1_2_6_10_1) 1871 e_1_2_6_9_1 e_1_2_6_8_1 Hall B. K. (e_1_2_6_20_1) 2010 e_1_2_6_7_1 e_1_2_6_6_1 e_1_2_6_25_1 e_1_2_6_24_1 e_1_2_6_23_1 e_1_2_6_2_1 e_1_2_6_22_1 e_1_2_6_27_1 e_1_2_6_26_1 |
References_xml | – reference: Gould, S. J. 2002. The Structure of Evolutionary Theory. The Belknap Press of Harvard University Press, Cambridge, MA. – reference: Pottin, K., Hyacinthe, C., and Rétaux, R. 2010. Conservation, development, and function of a cement gland-like structure in the fish Astyanax mexicanus. Proc. Natl. Acad. Sci. USA 107: 17256-17261. (doi: 10.1073/pnas.1005035107). – reference: Hall, B. K. 2007a. Homoplasy and homology: dichotomy or Continuum? J. Hum. Evol. 52: 473-479. – reference: Cole, A. G., and Hall, B. K. 2004b. The nature and significance of invertebrate cartilages revisited: distribution and histology of cartilage and cartilage-like tissues within the Metazoa. Zoology 107: 261-274. – reference: Brakefield, P. 2006. Evo-devo and constraints on selection. Trends Ecol. Evol. 21: 363-368. – reference: Abouheif, E. 2008. Parallelism as the pattern and process of mesoevolution. Evol. Dev. 10: 3-5. – reference: Hoekstra, H. E., Hirschmann, R. J., Bundey, R. A., Insel, P. A., and Crossland, J. P. 2006. A single amino acid mutation contributes to adaptive beach mouse color pattern. Science 313: 101-104 – reference: Jeffrey, W. R. 2007. Chordate ancestry of the neural crest: new insights. Semin. Cell Dev. Biol. 18: 481-491. – reference: Hall, B. K. 2003. Descent with modification: the unity underlying homology and homoplasy as seen through an analysis of development and evolution. Biol. Rev. Camb. Philos. Soc. 78: 409-433. – reference: Kemp, T. S. 2007. The origin of higher taxa: macroevolutionary processes, and the case of the mammals. Acta Zool. 88: 3-22. – reference: Scotland, R. W. 2011. What is parallelism? Evol. Dev. 13: 214-227. – reference: Hall, B. K. 2005. Bones and Cartilage: Developmental and Evolutionary Skeletal Biology. Elsevier Academic Press, London, pp. 787. – reference: Wake, D. B., Wake, M. H., and Specht, C. D. 2011. Homoplasy: from detecting pattern to determining process and mechanism of evolution. Science 331:1032-1035. – reference: Cole, A. G., and Hall, B. K. 2009. Cartilage differentiation in cephalopod molluscs. Zoology 112: 2-15. – reference: Owen, R. 1843. Lectures on Comparative Anatomy and Physiology of the Invertebrate Animals, Delivered at the Royal College of Surgeons in 1843. Longmans, Brown, Green and Longmans, London. – reference: Kemp, T. S. 2005. The Origin and Evolution of Mammals. Oxford University Press, Oxford and New York. – reference: Jacob, F. 1977. Evolution and tinkering. Science 196: 1161-1166. – reference: Cole, A. G., and Hall, B. K. 2004a. Cartilage is a metazoan tissue; integrating data from non-vertebrate sources. Acta Zool. 85: 69-80. – reference: Hall, B. K. 2010. Evolution; Principles and Processes. Jones and Bartlett, Publishers, Sudbury, MA. – reference: Goode, J.,(ed.) 2007. Tinkering: The Microevolution of Development. Novartis Foundation Symposium No. 284. John Wiley and Sons, Chichester, England. – reference: Owen, R. 1848. On the Archetype and Homologies of the Vertebrate Skeleton. Jon van Voorst, London. – reference: Satoh, N. 2009. An advanced filter-feeder hypothesis for urochordate evolution. Zool. Sci. 26: 97-111. – reference: Huang, J. K., Dorey, K., Ishibashi, S., and Amaya, E. 2007. BDNF promotes target innervation of Xenopus mandibular trigeminal axons in vivo. BMC Dev. Biol. 7: 59 (doi: 10.1186/1471-213X-7-59). – reference: Lankester, E. R. 1870. On the use of the term homology in modern zoology, and the distinction between homogenetic and homoplastic agreements. Ann. Mag. Nat. Hist., 6 (Ser. 4): 34-43. – reference: Hall, B. K. 1999. Evolutionary Developmental Biology. 2nd Ed. Kluwer Academic Publishers, the Netherlands. – reference: Franz-Odendaal, T. A., and Hall, B. K. 2006. Modularity and sense organs in the blind cavefish, Astyanax mexicanus. Evol. Dev. 8: 94-100. – reference: Darwin, C. 1871. The Descent of Man, and Selection in Relation to Sex. Murray, London. – reference: Shubin, N., Tabin, C., and Carroll, S.B. 2009. Deep homology and the origins of evolutionary novelty. Nature 388: 639-648. – reference: Cole, A. G. 2011. A review of diversity in the evolution and development of cartilage; the search for the origin of the chondrocyte. Eur. Cells Mater. 21: 122-129. – reference: Arendt, J., and Reznick, D. 2007. Convergence and parallelism reconsidered: what have we learned about the genetics of adaptation? Cell 23: 26-32. – reference: Hoekstra, H. E., and Coyne, J. A. 2007. The locus of evolution: evo devo and the genetics of adaptation. Evolution 61: 995-1016 – reference: Hall, B. K. 2009. The Neural Crest and Neural Crest Cells in Vertebrate Development and Evolution. Springer, New York, pp. xxii +400. – reference: Darwin, C. 1859. On the Origin of Species by Means of Natural Selection or the Preservation of Favoured Races in the Struggle for Life. Murray, London. – reference: Scotland, R. W. 2010. 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Parallelism has been the subject of a number of recent studies that have resulted in reassessment of the term and the process. Parallelism has been... Parallelism has been the subject of a number of recent studies that have resulted in reassessment of the term and the process. Parallelism has been aligned... SUMMARY Parallelism has been the subject of a number of recent studies that have resulted in reassessment of the term and the process. Parallelism has been... |
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SubjectTerms | Animals Biological Evolution Developmental Biology Embryonic Development Evolution & development Genotype Genotype & phenotype Phenotype Sequence Homology |
Title | Parallelism, deep homology, and evo-devo |
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