Degradation of 3-O-methylgallate in Sphingomonas paucimobilis SYK-6 by pathways involving protocatechuate 4,5-dioxygenase
Abstract Sphingomonas paucimobilis SYK-6 converts vanillate and syringate to protocatechuate and 3-O-methylgallate (3MGA), respectively. 3MGA is metabolized via multiple pathways involving 3MGA 3,4-dioxygenase, protocatechuate 4,5-dioxygenase (LigAB), and gallate dioxygenase whereas protocatechuate...
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Published in | FEMS microbiology letters Vol. 274; no. 2; pp. 323 - 328 |
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Main Authors | , , , |
Format | Journal Article |
Language | English |
Published |
Oxford, UK
Blackwell Publishing Ltd
01.09.2007
Blackwell Oxford University Press |
Subjects | |
Online Access | Get full text |
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Abstract | Abstract
Sphingomonas paucimobilis SYK-6 converts vanillate and syringate to protocatechuate and 3-O-methylgallate (3MGA), respectively. 3MGA is metabolized via multiple pathways involving 3MGA 3,4-dioxygenase, protocatechuate 4,5-dioxygenase (LigAB), and gallate dioxygenase whereas protocatechuate is degraded via the protocatechuate 4,5-cleavage pathway. Here the secondary role of LigAB in syringate metabolism is investigated. The reaction product of 3MGA catalyzed by His-tagged LigAB was identified as 4-carboxy-2-hydroxy-6-methoxy-6-oxohexa-2,4-dienoate (CHMOD) and 2-pyrone-4,6-dicarboxylate (PDC), indicating that 3MGA is transformed to CHMOD and PDC by both reactions catalyzed by DesZ and LigAB. Mutant analysis revealed that the 3MGA catabolic pathways involving LigAB are functional in SYK-6. |
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AbstractList | Sphingomonas paucimobilis SYK-6 converts vanillate and syringate to protocatechuate and 3-O-methylgallate (3MGA), respectively. 3MGA is metabolized via multiple pathways involving 3MGA 3,4-dioxygenase, protocatechuate 4,5-dioxygenase (LigAB), and gallate dioxygenase whereas protocatechuate is degraded via the protocatechuate 4,5-cleavage pathway. Here the secondary role of LigAB in syringate metabolism is investigated. The reaction product of 3MGA catalyzed by His-tagged LigAB was identified as 4-carboxy-2-hydroxy-6-methoxy-6-oxohexa-2,4-dienoate (CHMOD) and 2-pyrone-4,6-dicarboxylate (PDC), indicating that 3MGA is transformed to CHMOD and PDC by both reactions catalyzed by DesZ and LigAB. Mutant analysis revealed that the 3MGA catabolic pathways involving LigAB are functional in SYK-6. Abstract Sphingomonas paucimobilis SYK-6 converts vanillate and syringate to protocatechuate and 3-O-methylgallate (3MGA), respectively. 3MGA is metabolized via multiple pathways involving 3MGA 3,4-dioxygenase, protocatechuate 4,5-dioxygenase (LigAB), and gallate dioxygenase whereas protocatechuate is degraded via the protocatechuate 4,5-cleavage pathway. Here the secondary role of LigAB in syringate metabolism is investigated. The reaction product of 3MGA catalyzed by His-tagged LigAB was identified as 4-carboxy-2-hydroxy-6-methoxy-6-oxohexa-2,4-dienoate (CHMOD) and 2-pyrone-4,6-dicarboxylate (PDC), indicating that 3MGA is transformed to CHMOD and PDC by both reactions catalyzed by DesZ and LigAB. Mutant analysis revealed that the 3MGA catabolic pathways involving LigAB are functional in SYK-6. |
Author | Fukuda, Masao Masai, Eiji Kasai, Daisuke Katayama, Yoshihiro |
Author_xml | – sequence: 1 givenname: Daisuke surname: Kasai fullname: Kasai, Daisuke organization: Department of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan – sequence: 2 givenname: Eiji surname: Masai fullname: Masai, Eiji email: emasai@vos.nagaokaut.ac.jp organization: Department of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan – sequence: 3 givenname: Yoshihiro surname: Katayama fullname: Katayama, Yoshihiro organization: Graduate School of Bio-Applications and Systems Engineering, Tokyo University of Agriculture and Technology, Koganei, Japan – sequence: 4 givenname: Masao surname: Fukuda fullname: Fukuda, Masao organization: Department of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan |
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Cites_doi | 10.1128/JB.187.6.2030-2037.2005 10.1128/JB.182.24.6950-6957.2000 10.1128/JB.186.15.4951-4959.2004 10.1128/jb.152.3.1154-1162.1982 10.1128/JB.186.9.2757-2765.2004 10.1016/0378-1119(85)90120-9 10.1007/978-1-4419-9088-4_13 10.1128/JB.185.6.1768-1775.2003 10.1271/bbb.60437 10.1128/JB.185.1.41-50.2003 10.1128/JB.181.1.55-62.1999 10.1128/JB.187.15.5067-5074.2005 10.1128/AEM.71.9.5014-5021.2005 10.1016/0003-2697(76)90527-3 10.1128/JB.182.23.6651-6658.2000 |
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Keywords | syringate catabolism 3 methylgallate protocatechuate 4,5-dioxygenase Purification Enzyme Escherichia coli Reaction product Site directed mutagenesis Sphingomonas Gene expression Sphingomonas paucimobilis 3-0-methylgallate Protocatechuate 4,5-dioxygenase Bacteria Catabolism Oxidoreductases Enterobacteriaceae |
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References | 1994; 145 2004; 186 2005; 187 1986; 189 1987; 169 1976; 72 1999; 181 2000; 182 1988; 233 2007; 71 2004 2005; 71 1985; 33 1995; 165 1998; 64 1982; 152 1990; 172 2003; 185 10.1111/j.1574-6968.2007.00855.x-BIB19 10.1111/j.1574-6968.2007.00855.x-BIB1 10.1111/j.1574-6968.2007.00855.x-BIB3 10.1111/j.1574-6968.2007.00855.x-BIB2 10.1111/j.1574-6968.2007.00855.x-BIB5 10.1111/j.1574-6968.2007.00855.x-BIB4 10.1111/j.1574-6968.2007.00855.x-BIB7 10.1111/j.1574-6968.2007.00855.x-BIB6 10.1111/j.1574-6968.2007.00855.x-BIB9 10.1111/j.1574-6968.2007.00855.x-BIB8 10.1111/j.1574-6968.2007.00855.x-BIB20 10.1111/j.1574-6968.2007.00855.x-BIB10 Vaillancourt (10.1111/j.1574-6968.2007.00855.x-BIB21) 2004 10.1111/j.1574-6968.2007.00855.x-BIB11 10.1111/j.1574-6968.2007.00855.x-BIB22 10.1111/j.1574-6968.2007.00855.x-BIB12 10.1111/j.1574-6968.2007.00855.x-BIB13 10.1111/j.1574-6968.2007.00855.x-BIB14 10.1111/j.1574-6968.2007.00855.x-BIB15 10.1111/j.1574-6968.2007.00855.x-BIB16 10.1111/j.1574-6968.2007.00855.x-BIB17 10.1111/j.1574-6968.2007.00855.x-BIB18 |
References_xml | – volume: 165 start-page: 141 year: 1995 end-page: 142 article-title: New plasmids carrying antibiotic‐resistance cassettes publication-title: Gene – volume: 182 start-page: 6950 year: 2000 end-page: 6957 article-title: The 4‐oxalomesaconate hydratase gene, involved in the protocatechuate 4,5‐cleavage pathway, is essential to vanillate and syringate degradation in SYK‐6 publication-title: J Bacteriol – volume: 71 start-page: 1 year: 2007 end-page: 15 article-title: Genetic and biochemical investigations on bacterial catabolic pathway for lignin‐derived aromatic compounds publication-title: Biosci Biotechnol Biochem – volume: 33 start-page: 103 year: 1985 end-page: 119 article-title: Improved M13 phage cloning vectors and host strains publication-title: nucleotide sequences of the M13mp18 and pUC19 vectors – volume: 189 start-page: 113 year: 1986 end-page: 130 article-title: Use of bacteriophage T7 RNA polymerase to direct selective high‐level expression of cloned genes publication-title: J Mol Biol – volume: 185 start-page: 41 year: 2003 end-page: 50 article-title: Characterization of the 4‐carboxy‐4‐hydroxy‐2‐oxoadipate aldolase gene and operon structure of the protocatechuate 4,5‐cleavage pathway genes in SYK‐6 publication-title: J Bacteriol – volume: 186 start-page: 4951 year: 2004 end-page: 4959 article-title: Characterization of the 3‐ ‐methylgallate dioxygenase gene and evidence of multiple 3‐ ‐methylgallate catabolic pathways in SYK‐6 publication-title: J Bacteriol – volume: 187 start-page: 5067 year: 2005 end-page: 5074 article-title: Characterization of the gallate dioxygenase gene publication-title: three distinct ring cleavage dioxygenases are involved in syringate degradation by Sphingomonas paucimobilis SYK-6 – volume: 169 start-page: 3833 year: 1987 end-page: 3835 article-title: Degradation of substituted mandelic acids by fission reactions publication-title: J Bacteriol – year: 2004 – volume: 187 start-page: 2030 year: 2005 end-page: 2037 article-title: A tetrahydrofolate‐dependent ‐demethylase, LigM, is crucial for catabolism of vanillate and syringate in SYK‐6 publication-title: J Bacteriol – volume: 186 start-page: 2757 year: 2004 end-page: 2765 article-title: A novel tetrahydrofolate‐dependent ‐demethylase gene is essential for growth of SYK‐6 with syringate publication-title: J Bacteriol – volume: 182 start-page: 6651 year: 2000 end-page: 6658 article-title: Genetic and biochemical characterization of 4‐carboxy‐2‐hydroxymuconate‐6‐semialdehyde dehydrogenase and its role in the protocatechuate 4,5‐cleavage pathway in SYK‐6 publication-title: J Bacteriol – volume: 185 start-page: 1768 year: 2003 end-page: 1775 article-title: Roles of the enantioselective glutathione ‐transferases in cleavage of β‐aryl ether publication-title: J Bacteriol – volume: 172 start-page: 2704 year: 1990 end-page: 2709 article-title: Molecular cloning of the protocatechuate 4,5‐dioxygenase genes of publication-title: J Bacteriol – volume: 64 start-page: 2520 year: 1998 end-page: 2527 article-title: Cloning of a SYK‐6 gene encoding a novel oxygenase that cleaves lignin‐related biphenyl and characterization of the enzyme publication-title: Appl Environ Microbiol – volume: 152 start-page: 1154 year: 1982 end-page: 1162 article-title: 2‐pyrone‐4,6‐dicarboxylic acid, a catabolite of gallic acids in species publication-title: J Bacteriol – volume: 233 start-page: 129 year: 1988 end-page: 133 article-title: The metabolism of biphenyl structures in lignin by the soil bacterium ( SYK‐6) publication-title: FEBS Lett – volume: 72 start-page: 248 year: 1976 end-page: 254 article-title: A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein‐dye binding publication-title: Anal Biochem – volume: 71 start-page: 5014 year: 2005 end-page: 5021 article-title: A second 5‐carboxyvanillate decarboxylase gene, , is important for lignin‐related biphenyl catabolism in SYK‐6 publication-title: Appl Environ Microbiol – volume: 145 start-page: 69 year: 1994 end-page: 73 article-title: Small mobilizable multi‐purpose cloning vectors derived from the plasmids pK18 and pK19 publication-title: selection of defined deletions in the chromosome of Corynebacterium glutamicum – volume: 181 start-page: 55 year: 1999 end-page: 62 article-title: Genetic and biochemical characterization of a 2‐pyrone‐4,6‐dicarboxylic acid hydrolase involved in the protocatechuate 4,5‐cleavage pathway of SYK‐6 publication-title: J Bacteriol – ident: 10.1111/j.1574-6968.2007.00855.x-BIB1 doi: 10.1128/JB.187.6.2030-2037.2005 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB3 doi: 10.1128/JB.182.24.6950-6957.2000 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB14 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB15 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB5 doi: 10.1128/JB.186.15.4951-4959.2004 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB8 doi: 10.1128/jb.152.3.1154-1162.1982 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB12 doi: 10.1128/JB.186.9.2757-2765.2004 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB22 doi: 10.1016/0378-1119(85)90120-9 – volume-title: Ring-Cleavage Dioxygenases year: 2004 ident: 10.1111/j.1574-6968.2007.00855.x-BIB21 doi: 10.1007/978-1-4419-9088-4_13 contributor: fullname: Vaillancourt – ident: 10.1111/j.1574-6968.2007.00855.x-BIB19 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB20 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB9 doi: 10.1128/JB.185.6.1768-1775.2003 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB10 doi: 10.1271/bbb.60437 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB17 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB4 doi: 10.1128/JB.185.1.41-50.2003 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB7 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB13 doi: 10.1128/JB.181.1.55-62.1999 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB18 – ident: 10.1111/j.1574-6968.2007.00855.x-BIB6 doi: 10.1128/JB.187.15.5067-5074.2005 – ident: 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Snippet | Abstract
Sphingomonas paucimobilis SYK-6 converts vanillate and syringate to protocatechuate and 3-O-methylgallate (3MGA), respectively. 3MGA is metabolized... Sphingomonas paucimobilis SYK‐6 converts vanillate and syringate to protocatechuate and 3‐O‐methylgallate (3MGA), respectively. 3MGA is metabolized via... Sphingomonas paucimobilis SYK-6 converts vanillate and syringate to protocatechuate and 3-O-methylgallate (3MGA), respectively. 3MGA is metabolized via... |
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SubjectTerms | 3‐O‐methylgallate Bacteriology Biodegradation, Environmental Biological and medical sciences Chemical reactions Dioxygenases - metabolism Fundamental and applied biological sciences. Psychology Gallic Acid - analogs & derivatives Gallic Acid - metabolism Gene Expression Regulation, Bacterial Metabolic Networks and Pathways Metabolism. Enzymes Microbiology Oxidoreductases, O-Demethylating - metabolism Protocatechuate 4,5-dioxygenase Reaction products Sphingomonas Sphingomonas - enzymology Sphingomonas - genetics Sphingomonas - metabolism Sphingomonas paucimobilis Syk protein Syringate syringate catabolism |
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Title | Degradation of 3-O-methylgallate in Sphingomonas paucimobilis SYK-6 by pathways involving protocatechuate 4,5-dioxygenase |
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