Degradation of 3-O-methylgallate in Sphingomonas paucimobilis SYK-6 by pathways involving protocatechuate 4,5-dioxygenase

Abstract Sphingomonas paucimobilis SYK-6 converts vanillate and syringate to protocatechuate and 3-O-methylgallate (3MGA), respectively. 3MGA is metabolized via multiple pathways involving 3MGA 3,4-dioxygenase, protocatechuate 4,5-dioxygenase (LigAB), and gallate dioxygenase whereas protocatechuate...

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Published inFEMS microbiology letters Vol. 274; no. 2; pp. 323 - 328
Main Authors Kasai, Daisuke, Masai, Eiji, Katayama, Yoshihiro, Fukuda, Masao
Format Journal Article
LanguageEnglish
Published Oxford, UK Blackwell Publishing Ltd 01.09.2007
Blackwell
Oxford University Press
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Abstract Abstract Sphingomonas paucimobilis SYK-6 converts vanillate and syringate to protocatechuate and 3-O-methylgallate (3MGA), respectively. 3MGA is metabolized via multiple pathways involving 3MGA 3,4-dioxygenase, protocatechuate 4,5-dioxygenase (LigAB), and gallate dioxygenase whereas protocatechuate is degraded via the protocatechuate 4,5-cleavage pathway. Here the secondary role of LigAB in syringate metabolism is investigated. The reaction product of 3MGA catalyzed by His-tagged LigAB was identified as 4-carboxy-2-hydroxy-6-methoxy-6-oxohexa-2,4-dienoate (CHMOD) and 2-pyrone-4,6-dicarboxylate (PDC), indicating that 3MGA is transformed to CHMOD and PDC by both reactions catalyzed by DesZ and LigAB. Mutant analysis revealed that the 3MGA catabolic pathways involving LigAB are functional in SYK-6.
AbstractList Sphingomonas paucimobilis SYK-6 converts vanillate and syringate to protocatechuate and 3-O-methylgallate (3MGA), respectively. 3MGA is metabolized via multiple pathways involving 3MGA 3,4-dioxygenase, protocatechuate 4,5-dioxygenase (LigAB), and gallate dioxygenase whereas protocatechuate is degraded via the protocatechuate 4,5-cleavage pathway. Here the secondary role of LigAB in syringate metabolism is investigated. The reaction product of 3MGA catalyzed by His-tagged LigAB was identified as 4-carboxy-2-hydroxy-6-methoxy-6-oxohexa-2,4-dienoate (CHMOD) and 2-pyrone-4,6-dicarboxylate (PDC), indicating that 3MGA is transformed to CHMOD and PDC by both reactions catalyzed by DesZ and LigAB. Mutant analysis revealed that the 3MGA catabolic pathways involving LigAB are functional in SYK-6.
Abstract Sphingomonas paucimobilis SYK-6 converts vanillate and syringate to protocatechuate and 3-O-methylgallate (3MGA), respectively. 3MGA is metabolized via multiple pathways involving 3MGA 3,4-dioxygenase, protocatechuate 4,5-dioxygenase (LigAB), and gallate dioxygenase whereas protocatechuate is degraded via the protocatechuate 4,5-cleavage pathway. Here the secondary role of LigAB in syringate metabolism is investigated. The reaction product of 3MGA catalyzed by His-tagged LigAB was identified as 4-carboxy-2-hydroxy-6-methoxy-6-oxohexa-2,4-dienoate (CHMOD) and 2-pyrone-4,6-dicarboxylate (PDC), indicating that 3MGA is transformed to CHMOD and PDC by both reactions catalyzed by DesZ and LigAB. Mutant analysis revealed that the 3MGA catabolic pathways involving LigAB are functional in SYK-6.
Author Fukuda, Masao
Masai, Eiji
Kasai, Daisuke
Katayama, Yoshihiro
Author_xml – sequence: 1
  givenname: Daisuke
  surname: Kasai
  fullname: Kasai, Daisuke
  organization: Department of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan
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  givenname: Eiji
  surname: Masai
  fullname: Masai, Eiji
  email: emasai@vos.nagaokaut.ac.jp
  organization: Department of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan
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  surname: Katayama
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  surname: Fukuda
  fullname: Fukuda, Masao
  organization: Department of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan
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Cites_doi 10.1128/JB.187.6.2030-2037.2005
10.1128/JB.182.24.6950-6957.2000
10.1128/JB.186.15.4951-4959.2004
10.1128/jb.152.3.1154-1162.1982
10.1128/JB.186.9.2757-2765.2004
10.1016/0378-1119(85)90120-9
10.1007/978-1-4419-9088-4_13
10.1128/JB.185.6.1768-1775.2003
10.1271/bbb.60437
10.1128/JB.185.1.41-50.2003
10.1128/JB.181.1.55-62.1999
10.1128/JB.187.15.5067-5074.2005
10.1128/AEM.71.9.5014-5021.2005
10.1016/0003-2697(76)90527-3
10.1128/JB.182.23.6651-6658.2000
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Issue 2
Keywords syringate catabolism
3
methylgallate
protocatechuate 4,5-dioxygenase
Purification
Enzyme
Escherichia coli
Reaction product
Site directed mutagenesis
Sphingomonas
Gene expression
Sphingomonas paucimobilis
3-0-methylgallate
Protocatechuate 4,5-dioxygenase
Bacteria
Catabolism
Oxidoreductases
Enterobacteriaceae
Language English
License CC BY 4.0
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MergedId FETCHMERGED-LOGICAL-c4995-bdcc233b3068c95bd19c4b3b8167c10c52821971991d64adb7da3cd4dc1c982b3
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Blackwell
Oxford University Press
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References 1994; 145
2004; 186
2005; 187
1986; 189
1987; 169
1976; 72
1999; 181
2000; 182
1988; 233
2007; 71
2004
2005; 71
1985; 33
1995; 165
1998; 64
1982; 152
1990; 172
2003; 185
10.1111/j.1574-6968.2007.00855.x-BIB19
10.1111/j.1574-6968.2007.00855.x-BIB1
10.1111/j.1574-6968.2007.00855.x-BIB3
10.1111/j.1574-6968.2007.00855.x-BIB2
10.1111/j.1574-6968.2007.00855.x-BIB5
10.1111/j.1574-6968.2007.00855.x-BIB4
10.1111/j.1574-6968.2007.00855.x-BIB7
10.1111/j.1574-6968.2007.00855.x-BIB6
10.1111/j.1574-6968.2007.00855.x-BIB9
10.1111/j.1574-6968.2007.00855.x-BIB8
10.1111/j.1574-6968.2007.00855.x-BIB20
10.1111/j.1574-6968.2007.00855.x-BIB10
Vaillancourt (10.1111/j.1574-6968.2007.00855.x-BIB21) 2004
10.1111/j.1574-6968.2007.00855.x-BIB11
10.1111/j.1574-6968.2007.00855.x-BIB22
10.1111/j.1574-6968.2007.00855.x-BIB12
10.1111/j.1574-6968.2007.00855.x-BIB13
10.1111/j.1574-6968.2007.00855.x-BIB14
10.1111/j.1574-6968.2007.00855.x-BIB15
10.1111/j.1574-6968.2007.00855.x-BIB16
10.1111/j.1574-6968.2007.00855.x-BIB17
10.1111/j.1574-6968.2007.00855.x-BIB18
References_xml – volume: 165
  start-page: 141
  year: 1995
  end-page: 142
  article-title: New plasmids carrying antibiotic‐resistance cassettes
  publication-title: Gene
– volume: 182
  start-page: 6950
  year: 2000
  end-page: 6957
  article-title: The 4‐oxalomesaconate hydratase gene, involved in the protocatechuate 4,5‐cleavage pathway, is essential to vanillate and syringate degradation in SYK‐6
  publication-title: J Bacteriol
– volume: 71
  start-page: 1
  year: 2007
  end-page: 15
  article-title: Genetic and biochemical investigations on bacterial catabolic pathway for lignin‐derived aromatic compounds
  publication-title: Biosci Biotechnol Biochem
– volume: 33
  start-page: 103
  year: 1985
  end-page: 119
  article-title: Improved M13 phage cloning vectors and host strains
  publication-title: nucleotide sequences of the M13mp18 and pUC19 vectors
– volume: 189
  start-page: 113
  year: 1986
  end-page: 130
  article-title: Use of bacteriophage T7 RNA polymerase to direct selective high‐level expression of cloned genes
  publication-title: J Mol Biol
– volume: 185
  start-page: 41
  year: 2003
  end-page: 50
  article-title: Characterization of the 4‐carboxy‐4‐hydroxy‐2‐oxoadipate aldolase gene and operon structure of the protocatechuate 4,5‐cleavage pathway genes in SYK‐6
  publication-title: J Bacteriol
– volume: 186
  start-page: 4951
  year: 2004
  end-page: 4959
  article-title: Characterization of the 3‐ ‐methylgallate dioxygenase gene and evidence of multiple 3‐ ‐methylgallate catabolic pathways in SYK‐6
  publication-title: J Bacteriol
– volume: 187
  start-page: 5067
  year: 2005
  end-page: 5074
  article-title: Characterization of the gallate dioxygenase gene
  publication-title: three distinct ring cleavage dioxygenases are involved in syringate degradation by Sphingomonas paucimobilis SYK-6
– volume: 169
  start-page: 3833
  year: 1987
  end-page: 3835
  article-title: Degradation of substituted mandelic acids by fission reactions
  publication-title: J Bacteriol
– year: 2004
– volume: 187
  start-page: 2030
  year: 2005
  end-page: 2037
  article-title: A tetrahydrofolate‐dependent ‐demethylase, LigM, is crucial for catabolism of vanillate and syringate in SYK‐6
  publication-title: J Bacteriol
– volume: 186
  start-page: 2757
  year: 2004
  end-page: 2765
  article-title: A novel tetrahydrofolate‐dependent ‐demethylase gene is essential for growth of SYK‐6 with syringate
  publication-title: J Bacteriol
– volume: 182
  start-page: 6651
  year: 2000
  end-page: 6658
  article-title: Genetic and biochemical characterization of 4‐carboxy‐2‐hydroxymuconate‐6‐semialdehyde dehydrogenase and its role in the protocatechuate 4,5‐cleavage pathway in SYK‐6
  publication-title: J Bacteriol
– volume: 185
  start-page: 1768
  year: 2003
  end-page: 1775
  article-title: Roles of the enantioselective glutathione ‐transferases in cleavage of β‐aryl ether
  publication-title: J Bacteriol
– volume: 172
  start-page: 2704
  year: 1990
  end-page: 2709
  article-title: Molecular cloning of the protocatechuate 4,5‐dioxygenase genes of
  publication-title: J Bacteriol
– volume: 64
  start-page: 2520
  year: 1998
  end-page: 2527
  article-title: Cloning of a SYK‐6 gene encoding a novel oxygenase that cleaves lignin‐related biphenyl and characterization of the enzyme
  publication-title: Appl Environ Microbiol
– volume: 152
  start-page: 1154
  year: 1982
  end-page: 1162
  article-title: 2‐pyrone‐4,6‐dicarboxylic acid, a catabolite of gallic acids in species
  publication-title: J Bacteriol
– volume: 233
  start-page: 129
  year: 1988
  end-page: 133
  article-title: The metabolism of biphenyl structures in lignin by the soil bacterium ( SYK‐6)
  publication-title: FEBS Lett
– volume: 72
  start-page: 248
  year: 1976
  end-page: 254
  article-title: A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein‐dye binding
  publication-title: Anal Biochem
– volume: 71
  start-page: 5014
  year: 2005
  end-page: 5021
  article-title: A second 5‐carboxyvanillate decarboxylase gene, , is important for lignin‐related biphenyl catabolism in SYK‐6
  publication-title: Appl Environ Microbiol
– volume: 145
  start-page: 69
  year: 1994
  end-page: 73
  article-title: Small mobilizable multi‐purpose cloning vectors derived from the plasmids pK18 and pK19
  publication-title: selection of defined deletions in the chromosome of Corynebacterium glutamicum
– volume: 181
  start-page: 55
  year: 1999
  end-page: 62
  article-title: Genetic and biochemical characterization of a 2‐pyrone‐4,6‐dicarboxylic acid hydrolase involved in the protocatechuate 4,5‐cleavage pathway of SYK‐6
  publication-title: J Bacteriol
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB1
  doi: 10.1128/JB.187.6.2030-2037.2005
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB3
  doi: 10.1128/JB.182.24.6950-6957.2000
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB14
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB15
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB5
  doi: 10.1128/JB.186.15.4951-4959.2004
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB8
  doi: 10.1128/jb.152.3.1154-1162.1982
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB12
  doi: 10.1128/JB.186.9.2757-2765.2004
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB22
  doi: 10.1016/0378-1119(85)90120-9
– volume-title: Ring-Cleavage Dioxygenases
  year: 2004
  ident: 10.1111/j.1574-6968.2007.00855.x-BIB21
  doi: 10.1007/978-1-4419-9088-4_13
  contributor:
    fullname: Vaillancourt
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB19
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB20
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB9
  doi: 10.1128/JB.185.6.1768-1775.2003
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB10
  doi: 10.1271/bbb.60437
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB17
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB4
  doi: 10.1128/JB.185.1.41-50.2003
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB7
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB13
  doi: 10.1128/JB.181.1.55-62.1999
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB18
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB6
  doi: 10.1128/JB.187.15.5067-5074.2005
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB16
  doi: 10.1128/AEM.71.9.5014-5021.2005
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB2
  doi: 10.1016/0003-2697(76)90527-3
– ident: 10.1111/j.1574-6968.2007.00855.x-BIB11
  doi: 10.1128/JB.182.23.6651-6658.2000
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Snippet Abstract Sphingomonas paucimobilis SYK-6 converts vanillate and syringate to protocatechuate and 3-O-methylgallate (3MGA), respectively. 3MGA is metabolized...
Sphingomonas paucimobilis SYK‐6 converts vanillate and syringate to protocatechuate and 3‐O‐methylgallate (3MGA), respectively. 3MGA is metabolized via...
Sphingomonas paucimobilis SYK-6 converts vanillate and syringate to protocatechuate and 3-O-methylgallate (3MGA), respectively. 3MGA is metabolized via...
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StartPage 323
SubjectTerms 3‐O‐methylgallate
Bacteriology
Biodegradation, Environmental
Biological and medical sciences
Chemical reactions
Dioxygenases - metabolism
Fundamental and applied biological sciences. Psychology
Gallic Acid - analogs & derivatives
Gallic Acid - metabolism
Gene Expression Regulation, Bacterial
Metabolic Networks and Pathways
Metabolism. Enzymes
Microbiology
Oxidoreductases, O-Demethylating - metabolism
Protocatechuate 4,5-dioxygenase
Reaction products
Sphingomonas
Sphingomonas - enzymology
Sphingomonas - genetics
Sphingomonas - metabolism
Sphingomonas paucimobilis
Syk protein
Syringate
syringate catabolism
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Title Degradation of 3-O-methylgallate in Sphingomonas paucimobilis SYK-6 by pathways involving protocatechuate 4,5-dioxygenase
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