Comprehensive panicle phenotyping reveals that qSrn7/FZP influences higher-order branching
Rice grain number directly affects crop yield. Identifying alleles that improve panicle architecture would greatly aid the development of high-yield varieties. Here, we show that the quantitative trait locus qSrn7 contains rice FRIZZY PANICLE (FZP), a previously reported gene encoding an ERF transcr...
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Published in | Scientific reports Vol. 8; no. 1; pp. 12511 - 9 |
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Main Authors | , , , , , , , , , |
Format | Journal Article |
Language | English |
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Nature Publishing Group
21.08.2018
Nature Publishing Group UK Nature Portfolio |
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Abstract | Rice grain number directly affects crop yield. Identifying alleles that improve panicle architecture would greatly aid the development of high-yield varieties. Here, we show that the quantitative trait locus qSrn7 contains rice FRIZZY PANICLE (FZP), a previously reported gene encoding an ERF transcription factor that promotes floral transition. Reduced expression of FZP in the reproductive stage increases the extent of higher order branching of the panicle, resulting in increased grain number. Genotype analysis of this gene in cultivars from the publicly available National Institute of Agrobiological Sciences (NIAS) Core Collection demonstrated that the extent of higher order branching, especially in the upper panicle, was increased in those cultivars carrying the FZP allele associated with qSrn7. Furthermore, chromosome segment substitution lines resulting from a cross between Koshihikari and Kasalath, the latter of which carries qSrn7/FZP, also showed that upper panicle higher order branching and grain yield were increased by qSrn7/FZP. Our findings indicate that qSrn7/FZP influences panicle branching pattern and is thus useful in the breeding of high-yield rice varieties. |
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AbstractList | Abstract Rice grain number directly affects crop yield. Identifying alleles that improve panicle architecture would greatly aid the development of high-yield varieties. Here, we show that the quantitative trait locus qSrn7 contains rice FRIZZY PANICLE (FZP), a previously reported gene encoding an ERF transcription factor that promotes floral transition. Reduced expression of FZP in the reproductive stage increases the extent of higher order branching of the panicle, resulting in increased grain number. Genotype analysis of this gene in cultivars from the publicly available National Institute of Agrobiological Sciences (NIAS) Core Collection demonstrated that the extent of higher order branching, especially in the upper panicle, was increased in those cultivars carrying the FZP allele associated with qSrn7. Furthermore, chromosome segment substitution lines resulting from a cross between Koshihikari and Kasalath, the latter of which carries qSrn7/FZP, also showed that upper panicle higher order branching and grain yield were increased by qSrn7/FZP. Our findings indicate that qSrn7/FZP influences panicle branching pattern and is thus useful in the breeding of high-yield rice varieties. Abstract Rice grain number directly affects crop yield. Identifying alleles that improve panicle architecture would greatly aid the development of high-yield varieties. Here, we show that the quantitative trait locus qSrn7 contains rice FRIZZY PANICLE ( FZP ), a previously reported gene encoding an ERF transcription factor that promotes floral transition. Reduced expression of FZP in the reproductive stage increases the extent of higher order branching of the panicle, resulting in increased grain number. Genotype analysis of this gene in cultivars from the publicly available National Institute of Agrobiological Sciences (NIAS) Core Collection demonstrated that the extent of higher order branching, especially in the upper panicle, was increased in those cultivars carrying the FZP allele associated with qSrn7 . Furthermore, chromosome segment substitution lines resulting from a cross between Koshihikari and Kasalath, the latter of which carries qSrn7/FZP , also showed that upper panicle higher order branching and grain yield were increased by qSrn7/FZP . Our findings indicate that qSrn7/FZP influences panicle branching pattern and is thus useful in the breeding of high-yield rice varieties. Rice grain number directly affects crop yield. Identifying alleles that improve panicle architecture would greatly aid the development of high-yield varieties. Here, we show that the quantitative trait locus qSrn7 contains rice FRIZZY PANICLE (FZP), a previously reported gene encoding an ERF transcription factor that promotes floral transition. Reduced expression of FZP in the reproductive stage increases the extent of higher order branching of the panicle, resulting in increased grain number. Genotype analysis of this gene in cultivars from the publicly available National Institute of Agrobiological Sciences (NIAS) Core Collection demonstrated that the extent of higher order branching, especially in the upper panicle, was increased in those cultivars carrying the FZP allele associated with qSrn7. Furthermore, chromosome segment substitution lines resulting from a cross between Koshihikari and Kasalath, the latter of which carries qSrn7/FZP, also showed that upper panicle higher order branching and grain yield were increased by qSrn7/FZP. Our findings indicate that qSrn7/FZP influences panicle branching pattern and is thus useful in the breeding of high-yield rice varieties. Rice grain number directly affects crop yield. Identifying alleles that improve panicle architecture would greatly aid the development of high-yield varieties. Here, we show that the quantitative trait locus qSrn7 contains rice FRIZZY PANICLE ( FZP ), a previously reported gene encoding an ERF transcription factor that promotes floral transition. Reduced expression of FZP in the reproductive stage increases the extent of higher order branching of the panicle, resulting in increased grain number. Genotype analysis of this gene in cultivars from the publicly available National Institute of Agrobiological Sciences (NIAS) Core Collection demonstrated that the extent of higher order branching, especially in the upper panicle, was increased in those cultivars carrying the FZP allele associated with qSrn7 . Furthermore, chromosome segment substitution lines resulting from a cross between Koshihikari and Kasalath, the latter of which carries qSrn7/FZP , also showed that upper panicle higher order branching and grain yield were increased by qSrn7/FZP . Our findings indicate that qSrn7/FZP influences panicle branching pattern and is thus useful in the breeding of high-yield rice varieties. |
ArticleNumber | 12511 |
Author | Ota, Sadayuki Kunishima, Takeshi Kyozuka, Junko Ishihara, Ryota Takeda, Yasumi Kitano, Hidemi Agata, Ayumi Ikeda, Mayuko Fujishiro, Yasuko Hobo, Tokunori |
Author_xml | – sequence: 1 givenname: Yasuko surname: Fujishiro fullname: Fujishiro, Yasuko organization: Graduate School of Bioagricultural Sciences, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan – sequence: 2 givenname: Ayumi surname: Agata fullname: Agata, Ayumi organization: Graduate School of Bioagricultural Sciences, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan – sequence: 3 givenname: Sadayuki surname: Ota fullname: Ota, Sadayuki organization: Graduate School of Bioagricultural Sciences, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan – sequence: 4 givenname: Ryota surname: Ishihara fullname: Ishihara, Ryota organization: Graduate School of Bioagricultural Sciences, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan – sequence: 5 givenname: Yasumi surname: Takeda fullname: Takeda, Yasumi organization: Graduate School of Bioagricultural Sciences, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan – sequence: 6 givenname: Takeshi surname: Kunishima fullname: Kunishima, Takeshi organization: Graduate School of Bioagricultural Sciences, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan – sequence: 7 givenname: Mayuko surname: Ikeda fullname: Ikeda, Mayuko organization: Bioscience and Biotechnology Center, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan – sequence: 8 givenname: Junko surname: Kyozuka fullname: Kyozuka, Junko organization: Graduate School of Life Sciences, Tohoku University, Katahira, Aoba, Sendai, Miyagi, 980-8577, Japan – sequence: 9 givenname: Tokunori surname: Hobo fullname: Hobo, Tokunori email: hobo@agr.nagoya-u.ac.jp organization: Bioscience and Biotechnology Center, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan. hobo@agr.nagoya-u.ac.jp – sequence: 10 givenname: Hidemi surname: Kitano fullname: Kitano, Hidemi email: hdkitano@nuagr1.agr.nagoya-u.ac.jp organization: Bioscience and Biotechnology Center, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan. hdkitano@nuagr1.agr.nagoya-u.ac.jp |
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Snippet | Rice grain number directly affects crop yield. Identifying alleles that improve panicle architecture would greatly aid the development of high-yield varieties.... Abstract Rice grain number directly affects crop yield. Identifying alleles that improve panicle architecture would greatly aid the development of high-yield... Abstract Rice grain number directly affects crop yield. Identifying alleles that improve panicle architecture would greatly aid the development of high-yield... |
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StartPage | 12511 |
SubjectTerms | Agricultural production Alleles Chromosomes Cultivars Genes Genotype & phenotype Genotypes Grain Phenotyping Plant breeding Quantitative trait loci Rice Transcription factors |
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Title | Comprehensive panicle phenotyping reveals that qSrn7/FZP influences higher-order branching |
URI | https://www.ncbi.nlm.nih.gov/pubmed/30131566 https://www.proquest.com/docview/2091208184/abstract/ https://search.proquest.com/docview/2091815930 https://pubmed.ncbi.nlm.nih.gov/PMC6104091 https://doaj.org/article/b1e194e6a82747328ef9e7e6bf1695ac |
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