PiSCES: Pi(scine) stream community estimation system
The Piscine Stream Community Estimation System (PiSCES) provides users with a hypothesized fish community for any stream reach in the conterminous United States using information obtained from Nature Serve, the US Geological Survey (USGS), StreamCat, and the Peterson Field Guide to Freshwater Fishes...
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Published in | Environmental modelling & software : with environment data news Vol. 127; p. 104703 |
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Main Authors | , , , , , , , , |
Format | Journal Article |
Language | English |
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England
Elsevier Ltd
01.05.2020
Elsevier Science Ltd |
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Abstract | The Piscine Stream Community Estimation System (PiSCES) provides users with a hypothesized fish community for any stream reach in the conterminous United States using information obtained from Nature Serve, the US Geological Survey (USGS), StreamCat, and the Peterson Field Guide to Freshwater Fishes of North America for over 1000 native and non-native freshwater fish species. PiSCES can filter HUC8-based fish assemblages based on species-specific occurrence models; create a community abundance/biomass distribution by relating relative abundance to mean body weight of each species; and allow users to query its database to see ancillary characteristics of each species (e.g., habitat preferences and maximum size). Future efforts will aim to improve the accuracy of the species distribution database and refine/augment increase the occurrence models. The PiSCES tool is accessible at the EPA's Quantitative Environmental Domain (QED) website at https://qed.epacdx.net/pisces/
•Browser-based service used to display fish distributional information for continental US.•Database includes characteristics for 1018 species.•Estimation of a fish community for any stream segment in the continental US based on probabilistic occurrence models.•Community biomass/numbers spectrum estimation based on size-based thinning coefficients.•Potential use for decision-making and exploratory research. |
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AbstractList | The Piscine Stream Community Estimation System (PiSCES) provides users with a hypothesized fish community for any stream reach in the conterminous United States using information obtained from Nature Serve, the US Geological Survey (USGS), StreamCat, and the Peterson Field Guide to Freshwater Fishes of North America for over 1000 native and non-native freshwater fish species. PiSCES can filter HUC8-based fish assemblages based on species-specific occurrence models; create a community abundance/biomass distribution by relating relative abundance to mean body weight of each species; and allow users to query its database to see ancillary characteristics of each species (e.g., habitat preferences and maximum size). Future efforts will aim to improve the accuracy of the species distribution database and refine/augment increase the occurrence models. The PiSCES tool is accessible at the EPA's Quantitative Environmental Domain (QED) website at https://qed.epacdx.net/pisces/. The Piscine Stream Community Estimation System (PiSCES) provides users with a hypothesized fish community for any stream reach in the conterminous United States using information obtained from Nature Serve, the US Geological Survey (USGS), StreamCat, and the Peterson Field Guide to Freshwater Fishes of North America for over 1000 native and non-native freshwater fish species. PiSCES can filter HUC8-based fish assemblages based on species-specific occurrence models; create a community abundance/biomass distribution by relating relative abundance to mean body weight of each species; and allow users to query its database to see ancillary characteristics of each species (e.g., habitat preferences and maximum size). Future efforts will aim to improve the accuracy of the species distribution database and refine/augment increase the occurrence models. The PiSCES tool is accessible at the EPA's Quantitative Environmental Domain (QED) website at https://qed.epacdx.net/pisces/ •Browser-based service used to display fish distributional information for continental US.•Database includes characteristics for 1018 species.•Estimation of a fish community for any stream segment in the continental US based on probabilistic occurrence models.•Community biomass/numbers spectrum estimation based on size-based thinning coefficients.•Potential use for decision-making and exploratory research. The Piscine Stream Community Estimation System (PiSCES) provides users with a hypothesized fish community for any stream reach in the conterminous United States using information obtained from Nature Serve, the US Geological Survey (USGS), StreamCat, and the Peterson Field Guide to Freshwater Fishes of North America for over 1000 native and non-native freshwater fish species. PiSCES can filter HUC8-based fish assemblages based on species-specific occurrence models; create a community abundance/biomass distribution by relating relative abundance to mean body weight of each species; and allow users to query its database to see ancillary characteristics of each species (e.g., habitat preferences and maximum size). Future efforts will aim to improve the accuracy of the species distribution database and refine/augment increase the occurrence models. The PiSCES tool is accessible at the EPA’s Quantitative Environmental Domain (QED) website at https://qed.epacdx.net/pisces/ |
ArticleNumber | 104703 |
Author | Johnston, John M. Prieto, Lourdes Barber, Craig Smith, Deron Ignatius, Amber Galvin, Mike Wolfe, Kurt Cyterski, Mike Parmar, Rajbir |
AuthorAffiliation | a United States Environmental Protection Agency, National Exposure Research Laboratory, Athens, GA, USA c ORISE Research Associate, Oak Ridge Institute for Science and Education, Oak Ridge, TN, USA b Student Services Contractor, United States Environmental Protection Agency, National Exposure Research Laboratory, Athens, GA, USA |
AuthorAffiliation_xml | – name: a United States Environmental Protection Agency, National Exposure Research Laboratory, Athens, GA, USA – name: b Student Services Contractor, United States Environmental Protection Agency, National Exposure Research Laboratory, Athens, GA, USA – name: c ORISE Research Associate, Oak Ridge Institute for Science and Education, Oak Ridge, TN, USA |
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Keywords | Community structure Community size spectra Fish distributions |
Language | English |
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SubjectTerms | Abundance Body weight Community size spectra Community structure Fish Fish distributions Freshwater fish Geographical distribution Geological surveys Habitat preferences Indigenous species Introduced species Relative abundance Websites |
Title | PiSCES: Pi(scine) stream community estimation system |
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