Novel pathogenic genomic variants leading to autosomal dominant and recessive Robinow syndrome

Robinow syndrome (RS) is a genetically heterogeneous disorder characterized by skeletal dysplasia and a distinctive facial appearance. Previous studies have revealed locus heterogeneity with rare variants in DVL1, DVL3, FZD2, NXN, ROR2, and WNT5A underlying the etiology of RS. The aforementioned “Ro...

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Published inAmerican journal of medical genetics. Part A Vol. 185; no. 12; pp. 3593 - 3600
Main Authors Zhang, Chaofan, Mazzeu, Juliana F., Eisfeldt, Jesper, Grochowski, Christopher M., White, Janson, Akdemir, Zeynep C., Jhangiani, Shalini N., Muzny, Donna M., Gibbs, Richard A., Lindstrand, Anna, Lupski, James R., Sutton, V. Reid, Carvalho, Claudia M. B.
Format Journal Article
LanguageEnglish
Published Hoboken, USA John Wiley & Sons, Inc 01.12.2021
Wiley Subscription Services, Inc
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ISSN1552-4825
1552-4833
1552-4833
DOI10.1002/ajmg.a.61908

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Abstract Robinow syndrome (RS) is a genetically heterogeneous disorder characterized by skeletal dysplasia and a distinctive facial appearance. Previous studies have revealed locus heterogeneity with rare variants in DVL1, DVL3, FZD2, NXN, ROR2, and WNT5A underlying the etiology of RS. The aforementioned “Robinow‐associated genes” and their gene products all play a role in the WNT/planar cell polarity signaling pathway. We performed gene‐targeted Sanger sequencing, exome sequencing, genome sequencing, and array comparative genomic hybridization on four subjects with a clinical diagnosis of RS who had not had prior DNA testing. Individuals in our cohort were found to carry pathogenic or likely pathogenic variants in three RS related genes: DVL1, ROR2, and NXN. One subject was found to have a nonsense variant (c.817C > T [p.Gln273*]) in NXN in trans with an ~1 Mb telomeric deletion on chromosome 17p containing NXN, which supports our contention that biallelic NXN variant alleles are responsible for a novel autosomal recessive RS locus. These findings provide increased understanding of the role of WNT signaling in skeletal development and maintenance. These data further support the hypothesis that dysregulation of the noncanonical WNT pathway in humans gives rise to RS.
AbstractList Robinow syndrome (RS) is a genetically heterogeneous disorder characterized by skeletal dysplasia and a distinctive facial appearance. Previous studies have revealed locus heterogeneity with rare variants in DVL1, DVL3, FZD2, NXN, ROR2, and WNT5A underlying the etiology of RS. The aforementioned “Robinow‐associated genes” and their gene products all play a role in the WNT/planar cell polarity signaling pathway. We performed gene‐targeted Sanger sequencing, exome sequencing, genome sequencing, and array comparative genomic hybridization on four subjects with a clinical diagnosis of RS who had not had prior DNA testing. Individuals in our cohort were found to carry pathogenic or likely pathogenic variants in three RS related genes: DVL1, ROR2, and NXN. One subject was found to have a nonsense variant (c.817C > T [p.Gln273*]) in NXN in trans with an ~1 Mb telomeric deletion on chromosome 17p containing NXN, which supports our contention that biallelic NXN variant alleles are responsible for a novel autosomal recessive RS locus. These findings provide increased understanding of the role of WNT signaling in skeletal development and maintenance. These data further support the hypothesis that dysregulation of the noncanonical WNT pathway in humans gives rise to RS.
Robinow syndrome (RS) is a genetically heterogeneous disorder characterized by skeletal dysplasia and a distinctive facial appearance. Previous studies have revealed locus heterogeneity with rare variants in DVL1, DVL3, FZD2, NXN, ROR2, and WNT5A underlying the etiology of RS. The aforementioned "Robinow-associated genes" and their gene products all play a role in the WNT/planar cell polarity signaling pathway. We performed gene-targeted Sanger sequencing, exome sequencing, genome sequencing, and array comparative genomic hybridization on four subjects with a clinical diagnosis of RS who had not had prior DNA testing. Individuals in our cohort were found to carry pathogenic or likely pathogenic variants in three RS related genes: DVL1, ROR2, and NXN. One subject was found to have a nonsense variant (c.817C > T [p.Gln273*]) in NXN in trans with an ~1 Mb telomeric deletion on chromosome 17p containing NXN, which supports our contention that biallelic NXN variant alleles are responsible for a novel autosomal recessive RS locus. These findings provide increased understanding of the role of WNT signaling in skeletal development and maintenance. These data further support the hypothesis that dysregulation of the noncanonical WNT pathway in humans gives rise to RS.Robinow syndrome (RS) is a genetically heterogeneous disorder characterized by skeletal dysplasia and a distinctive facial appearance. Previous studies have revealed locus heterogeneity with rare variants in DVL1, DVL3, FZD2, NXN, ROR2, and WNT5A underlying the etiology of RS. The aforementioned "Robinow-associated genes" and their gene products all play a role in the WNT/planar cell polarity signaling pathway. We performed gene-targeted Sanger sequencing, exome sequencing, genome sequencing, and array comparative genomic hybridization on four subjects with a clinical diagnosis of RS who had not had prior DNA testing. Individuals in our cohort were found to carry pathogenic or likely pathogenic variants in three RS related genes: DVL1, ROR2, and NXN. One subject was found to have a nonsense variant (c.817C > T [p.Gln273*]) in NXN in trans with an ~1 Mb telomeric deletion on chromosome 17p containing NXN, which supports our contention that biallelic NXN variant alleles are responsible for a novel autosomal recessive RS locus. These findings provide increased understanding of the role of WNT signaling in skeletal development and maintenance. These data further support the hypothesis that dysregulation of the noncanonical WNT pathway in humans gives rise to RS.
Robinow syndrome (RS) is a genetically heterogeneous disorder characterized by skeletal dysplasia and a distinctive facial appearance. Previous studies have revealed locus heterogeneity with rare variants in DVL1 , DVL3 , FZD2 , NXN , ROR2 , and WNT5A underlying the etiology of RS. The aforementioned “Robinow‐associated genes” and their gene products all play a role in the WNT/planar cell polarity signaling pathway. We performed gene‐targeted Sanger sequencing, exome sequencing, genome sequencing, and array comparative genomic hybridization on four subjects with a clinical diagnosis of RS who had not had prior DNA testing. Individuals in our cohort were found to carry pathogenic or likely pathogenic variants in three RS related genes: DVL1 , ROR2 , and NXN . One subject was found to have a nonsense variant (c.817C > T [p.Gln273*]) in NXN in trans with an ~1 Mb telomeric deletion on chromosome 17p containing NXN , which supports our contention that biallelic NXN variant alleles are responsible for a novel autosomal recessive RS locus. These findings provide increased understanding of the role of WNT signaling in skeletal development and maintenance. These data further support the hypothesis that dysregulation of the noncanonical WNT pathway in humans gives rise to RS.
Robinow syndrome (RS) is a genetically heterogeneous disorder characterized by skeletal dysplasia and a distinctive facial appearance. Previous studies have revealed locus heterogeneity with rare variants in DVL1 , DVL3 , FZD2 , NXN , ROR2 , and WNT5A underlying the etiology of RS. The aforementioned ‘Robinow associated genes’ and their gene products all play a role in the WNT/planar cell polarity (PCP) signaling pathway. We performed gene-targeted Sanger sequencing, exome sequencing (ES), genome sequencing (GS) and array comparative genomic hybridization (aCGH) on four subjects with a clinical diagnosis of RS who had not had prior DNA testing. Individuals in our cohort were found to carry pathogenic or likely pathogenic variants in three RS related genes: DVL1, ROR2 and NXN . One subject was found to have a nonsense variant (c.817C>T [p.Gln273*]) in NXN in trans with an ∼1 Mb telomeric deletion on chromosome 17p containing NXN , which supports our contention that biallelic NXN variant alleles are responsible for a novel autosomal recessive RS locus. These findings provide increased understanding of the role of WNT signaling in skeletal development and maintenance. These data further support the hypothesis that dysregulation of the noncanonical WNT pathway in humans gives rise to RS.
Robinow syndrome (RS) is a genetically heterogeneous disorder characterized by skeletal dysplasia and a distinctive facial appearance. Previous studies have revealed locus heterogeneity with rare variants in DVL1, DVL3, FZD2, NXN, ROR2, and WNT5A underlying the etiology of RS. The aforementioned “Robinow‐associated genes” and their gene products all play a role in the WNT/planar cell polarity signaling pathway. We performed gene‐targeted Sanger sequencing, exome sequencing, genome sequencing, and array comparative genomic hybridization on four subjects with a clinical diagnosis of RS who had not had prior DNA testing. Individuals in our cohort were found to carry pathogenic or likely pathogenic variants in three RS related genes: DVL1, ROR2, and NXN. One subject was found to have a nonsense variant (c.817C > T [p.Gln273*]) in NXN in trans with an ~1 Mb telomeric deletion on chromosome 17p containing NXN, which supports our contention that biallelic NXN variant alleles are responsible for a novel autosomal recessive RS locus. These findings provide increased understanding of the role of WNT signaling in skeletal development and maintenance. These data further support the hypothesis that dysregulation of the noncanonical WNT pathway in humans gives rise to RS.
Author Zhang, Chaofan
Grochowski, Christopher M.
Gibbs, Richard A.
Muzny, Donna M.
White, Janson
Akdemir, Zeynep C.
Lindstrand, Anna
Mazzeu, Juliana F.
Eisfeldt, Jesper
Jhangiani, Shalini N.
Lupski, James R.
Sutton, V. Reid
Carvalho, Claudia M. B.
AuthorAffiliation 7 Science for Life Laboratory, Karolinska Institutet, Stockholm, Sweden
9 Texas Children’s Hospital, Houston, TX
3 Robinow Syndrome Foundation, Anoka, MN
6 Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden
2 University of Brasilia, Brasilia, Brazil
11 Pacific Northwest Research Institute (PNRI), Seattle, WA
4 Department of Clinical Genetics, Karolinska University Hospital, Stockholm, Sweden
8 Human Genome Sequencing Center, BCM, Houston, TX
10 Department of Pediatrics, BCM, Houston, TX
1 Department of Molecular and Human Genetics, BCM, Houston, TX
5 Department of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden
AuthorAffiliation_xml – name: 1 Department of Molecular and Human Genetics, BCM, Houston, TX
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Issue 12
Keywords clinical diagnosis
missense
deletion
structural variant
skeletal dysplasia
Language English
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Eunice Kennedy Shriver National Institute of Child Health and Human Development, Grant/Award Number: R03HD092569; National Human Genome Research Institute, Grant/Award Number: UM1HG006542; National Institute of Neurological Disorders and Stroke, Grant/Award Number: R35 NS105078; Swedish Research Council, Grant/Award Number: 2017‐02936
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content type line 14
content type line 23
Author Contributions
C.Z., J.R.L. and C.M.B.C.: designed the study and take responsibility for the integrity of the data and accuracy of the data analysis. C.Z., J.F.M., C.M.G., J.W., V.R.S. and C.M.B.C.: collected the data. J.E. and A.L.: performed genome sequencing and structural variant analysis. Z.C.A., S.N.J., D.M.M., and R.A.G.: performed exome sequencing and variant annotation. C.Z.: analyzed data and wrote the initial manuscript draft. J.R.L., V.R.S. and C.M.B.C.: provided critical input into the writing of the manuscript. All the authors: were involved in reviewing and revising the final submitted manuscript.
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Snippet Robinow syndrome (RS) is a genetically heterogeneous disorder characterized by skeletal dysplasia and a distinctive facial appearance. Previous studies have...
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pubmed
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wiley
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StartPage 3593
SubjectTerms Bone dysplasia
Chromosome 17
Chromosome deletion
Chromosomes, Human, Pair 17 - genetics
clinical diagnosis
Comparative Genomic Hybridization
Craniofacial Abnormalities - genetics
Craniofacial Abnormalities - physiopathology
deletion
Dishevelled protein
Dishevelled Proteins - genetics
Dwarfism - genetics
Dwarfism - physiopathology
Dysplasia
Etiology
Female
Genes
Genes, Dominant - genetics
Genes, Recessive - genetics
Genetic Heterogeneity
Genetic Predisposition to Disease
Genomic Structural Variation - genetics
Genomics
Humans
Hybridization
Limb Deformities, Congenital - genetics
Limb Deformities, Congenital - physiopathology
Male
missense
Oxidoreductases - genetics
Polarity
Receptor Tyrosine Kinase-like Orphan Receptors - genetics
Signal transduction
skeletal dysplasia
Skeleton
structural variant
Urogenital Abnormalities - genetics
Urogenital Abnormalities - physiopathology
Whole Exome Sequencing
Whole Genome Sequencing
Wnt protein
Wnt Signaling Pathway - genetics
Title Novel pathogenic genomic variants leading to autosomal dominant and recessive Robinow syndrome
URI https://onlinelibrary.wiley.com/doi/abs/10.1002%2Fajmg.a.61908
https://www.ncbi.nlm.nih.gov/pubmed/33048444
https://www.proquest.com/docview/2597693290
https://www.proquest.com/docview/2450672603
https://pubmed.ncbi.nlm.nih.gov/PMC8445516
http://kipublications.ki.se/Default.aspx?queryparsed=id:144910487
Volume 185
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