Data on the draft genome sequence of Caryocar brasiliense Camb. (Caryocaraceae): An important genetic resource from Brazilian savannas

Caryocar brasiliense (Caryocaraceae) is a Neotropical tree species widely distributed in Brazilian savannas. This species is very popular in central Brazil mainly due to the use of its fruits in the local cuisine and their anti-inflammatory proprieties, and indeed it is one of the candidates, among...

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Published inData in brief Vol. 26; p. 104543
Main Authors Nunes, Rhewter, Gonçalves, Ariany Rosa, Pires de Campos Telles, Mariana
Format Journal Article
LanguageEnglish
Published Elsevier Inc 01.10.2019
Elsevier
Subjects
Cerrado
Genetics, Genomics and Molecular Biology
Genome assembly
Genome evolution
Native plants
SSR markers
Native plants
Genome assembly
Cerrado
Genome evolution
SSR markers
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Abstract Caryocar brasiliense (Caryocaraceae) is a Neotropical tree species widely distributed in Brazilian savannas. This species is very popular in central Brazil mainly due to the use of its fruits in the local cuisine and their anti-inflammatory proprieties, and indeed it is one of the candidates, among Brazilian native plants, for fast track incorporation into cropping systems. Considering the importance of Caryocar brasiliense, little is known about its genetics and genomics, and determination of a reference genome sequence could improve the understanding of its evolution, as well as the development of tools for domestication. Here, we provide the first draft genome of C. brasiliense, the raw sequencing data and some multiplex sets of high quality microsatellite primers. Data on the genome project can be obtained from the BioProject at NCBI (https://www.ncbi.nlm.nih.gov/bioproject/?term=caryocar).
AbstractList Caryocar brasiliense (Caryocaraceae) is a Neotropical tree species widely distributed in Brazilian savannas. This species is very popular in central Brazil mainly due to the use of its fruits in the local cuisine and their anti-inflammatory proprieties, and indeed it is one of the candidates, among Brazilian native plants, for fast track incorporation into cropping systems. Considering the importance of Caryocar brasiliense , little is known about its genetics and genomics, and determination of a reference genome sequence could improve the understanding of its evolution, as well as the development of tools for domestication. Here, we provide the first draft genome of C. brasiliense , the raw sequencing data and some multiplex sets of high quality microsatellite primers. Data on the genome project can be obtained from the BioProject at NCBI (https://www.ncbi.nlm.nih.gov/bioproject/?term=caryocar).
Caryocar brasiliense (Caryocaraceae) is a Neotropical tree species widely distributed in Brazilian savannas. This species is very popular in central Brazil mainly due to the use of its fruits in the local cuisine and their anti-inflammatory proprieties, and indeed it is one of the candidates, among Brazilian native plants, for fast track incorporation into cropping systems. Considering the importance of Caryocar brasiliense, little is known about its genetics and genomics, and determination of a reference genome sequence could improve the understanding of its evolution, as well as the development of tools for domestication. Here, we provide the first draft genome of C. brasiliense, the raw sequencing data and some multiplex sets of high quality microsatellite primers. Data on the genome project can be obtained from the BioProject at NCBI (https://www.ncbi.nlm.nih.gov/bioproject/?term=caryocar). Keywords: Cerrado, Genome assembly, Genome evolution, Native plants, SSR markers
Caryocar brasiliense (Caryocaraceae) is a Neotropical tree species widely distributed in Brazilian savannas. This species is very popular in central Brazil mainly due to the use of its fruits in the local cuisine and their anti-inflammatory proprieties, and indeed it is one of the candidates, among Brazilian native plants, for fast track incorporation into cropping systems. Considering the importance of Caryocar brasiliense, little is known about its genetics and genomics, and determination of a reference genome sequence could improve the understanding of its evolution, as well as the development of tools for domestication. Here, we provide the first draft genome of C. brasiliense, the raw sequencing data and some multiplex sets of high quality microsatellite primers. Data on the genome project can be obtained from the BioProject at NCBI (https://www.ncbi.nlm.nih.gov/bioproject/?term=caryocar).
ArticleNumber 104543
Author Nunes, Rhewter
Gonçalves, Ariany Rosa
Pires de Campos Telles, Mariana
AuthorAffiliation b Escola de Ciências Agrárias e Biológicas, PUC-GO, Goiânia, Brazil
a Laboratório de Genética & Biodiversidade, Instituto de Ciências Biológicas - UFG, Goiânia, 74690-900, Brazil
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10.1093/bioinformatics/btp670
10.1093/bioinformatics/btt310
10.1101/gr.170720.113
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Keywords Native plants
Genome assembly
Cerrado
Genome evolution
SSR markers
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Snippet Caryocar brasiliense (Caryocaraceae) is a Neotropical tree species widely distributed in Brazilian savannas. This species is very popular in central Brazil...
Caryocar brasiliense (Caryocaraceae) is a Neotropical tree species widely distributed in Brazilian savannas. This species is very popular in central Brazil...
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SubjectTerms Cerrado
Genetics, Genomics and Molecular Biology
Genome assembly
Genome evolution
Native plants
SSR markers
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Title Data on the draft genome sequence of Caryocar brasiliense Camb. (Caryocaraceae): An important genetic resource from Brazilian savannas
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