Mechanism Across Scales: A Holistic Modeling Framework Integrating Laboratory and Field Studies for Microbial Ecology

• Published in: Frontiers in microbiology Vol. 12; p. 642422
• Main Authors: Lui, Lauren M, Majumder, Erica L-W, Smith, Heidi J, Carlson, Hans K, von Netzer, Frederick, Fields, Matthew W, Stahl, David A, Zhou, Jizhong, Hazen, Terry C, Baliga, Nitin S, Adams, Paul D, Arkin, Adam P
• Format: Journal Article
• Language: English
• Published: Switzerland Frontiers Media SA 24.03.2021; Frontiers Media S.A
• Subjects: metabolic model; Microbiology; reactive transport modeling; species interaction network; subsurface microbial ecology; systems biology; systems biology; reactive transport modeling; species interaction network; subsurface microbial ecology; metabolic model

Over the last century, leaps in technology for imaging, sampling, detection, high-throughput sequencing, and -omics analyses have revolutionized microbial ecology to enable rapid acquisition of extensive datasets for microbial communities across the ever-increasing temporal and spatial scales. The p...