Approximate Subject Specific Pseudo MRI from an Available MRI Dataset for MEG Source Imaging
Computation of headmodel and sourcemodel from the subject's MRI scan is an essential step for source localization of magnetoencephalography (MEG) (or EEG) sensor signals. In the absence of a real MRI scan, pseudo MRI (i.e., associated headmodel and sourcemodel) is often approximated from an ava...
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Published in | Frontiers in neuroinformatics Vol. 11; p. 50 |
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Main Authors | , , , , |
Format | Journal Article |
Language | English |
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08.08.2017
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ISSN | 1662-5196 1662-5196 |
DOI | 10.3389/fninf.2017.00050 |
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Abstract | Computation of headmodel and sourcemodel from the subject's MRI scan is an essential step for source localization of magnetoencephalography (MEG) (or EEG) sensor signals. In the absence of a real MRI scan, pseudo MRI (i.e., associated headmodel and sourcemodel) is often approximated from an available standard MRI template or pool of MRI scans considering the subject's digitized head surface. In the present study, we approximated two types of pseudo MRI (i.e., associated headmodel and sourcemodel) using an available pool of MRI scans with the focus on MEG source imaging. The first was the first rank pseudo MRI; that is, the MRI scan in the dataset having the lowest objective registration error (ORE) after being registered (rigid body transformation with isotropic scaling) to the subject's digitized head surface. The second was the averaged rank pseudo MRI that is generated by averaging of headmodels and sourcemodels from multiple MRI scans respectively, after being registered to the subject's digitized head surface. Subject level analysis showed that the mean upper bound of source location error for the approximated sourcemodel in reference to the real one was 10 ± 3 mm for the averaged rank pseudo MRI, which was significantly lower than the first rank pseudo MRI approach. Functional group source response in the brain to visual stimulation in the form of event-related power (ERP) at the time latency of peak amplitude showed noticeably identical source distribution for first rank pseudo MRI, averaged rank pseudo MRI, and real MRI. The source localization error for functional peak response was significantly lower for averaged rank pseudo MRI compared to first rank pseudo MRI. We conclude that it is feasible to use approximated pseudo MRI, particularly the averaged rank pseudo MRI, as a substitute for real MRI without losing the generality of the functional group source response. |
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AbstractList | Computation of headmodel and sourcemodel from the subject’s MRI scan is an essential step for source localization of MEG (or EEG) sensor signals. In the absence of a real MRI scan, pseudo MRI (i.e., associated headmodel and sourcemodel) is often approximated from an available standard MRI template or pool of MRI scans considering the subject’s digitized head surface. In the present study, we approximated two types of pseudo MRI (i.e., associated headmodel and sourcemodel) using an available pool of MRI scans with the focus on MEG source imaging. The first was the first rank pseudo MRI; that is, the MRI scan in the dataset having the lowest objective registration error after being registered (rigid body transformation with isotropic scaling) to the subject’s digitized head surface. The second was the averaged rank pseudo MRI that is generated by averaging of headmodels and sourcemodels from multiple MRI scans respectively, after being registered to the subject’s digitized head surface. Subject level analysis showed that the mean upper bound of source location error for the approximated sourcemodel in reference to the real one was 10 mm ± 3 mm for the averaged rank pseudo MRI, which was significantly lower than the first rank pseudo MRI approach. Functional group source response in the brain to visual stimulation in the form of event-related power at the time latency of peak amplitude showed noticeably identical source distribution for first rank pseudo MRI, averaged rank pseudo MRI, and real MRI. The source localization error for functional peak response was significantly lower for averaged rank pseudo MRI compared to first rank pseudo MRI. We conclude that it is feasible to use approximated pseudo MRI, particularly the averaged rank pseudo MRI, as a substitute for real MRI without losing the generality of the functional group source response. Computation of headmodel and sourcemodel from the subject's MRI scan is an essential step for source localization of magnetoencephalography (MEG) (or EEG) sensor signals. In the absence of a real MRI scan, pseudo MRI (i.e., associated headmodel and sourcemodel) is often approximated from an available standard MRI template or pool of MRI scans considering the subject's digitized head surface. In the present study, we approximated two types of pseudo MRI (i.e., associated headmodel and sourcemodel) using an available pool of MRI scans with the focus on MEG source imaging. The first was the first rank pseudo MRI; that is, the MRI scan in the dataset having the lowest objective registration error (ORE) after being registered (rigid body transformation with isotropic scaling) to the subject's digitized head surface. The second was the averaged rank pseudo MRI that is generated by averaging of headmodels and sourcemodels from multiple MRI scans respectively, after being registered to the subject's digitized head surface. Subject level analysis showed that the mean upper bound of source location error for the approximated sourcemodel in reference to the real one was 10 ± 3 mm for the averaged rank pseudo MRI, which was significantly lower than the first rank pseudo MRI approach. Functional group source response in the brain to visual stimulation in the form of event-related power (ERP) at the time latency of peak amplitude showed noticeably identical source distribution for first rank pseudo MRI, averaged rank pseudo MRI, and real MRI. The source localization error for functional peak response was significantly lower for averaged rank pseudo MRI compared to first rank pseudo MRI. We conclude that it is feasible to use approximated pseudo MRI, particularly the averaged rank pseudo MRI, as a substitute for real MRI without losing the generality of the functional group source response.Computation of headmodel and sourcemodel from the subject's MRI scan is an essential step for source localization of magnetoencephalography (MEG) (or EEG) sensor signals. In the absence of a real MRI scan, pseudo MRI (i.e., associated headmodel and sourcemodel) is often approximated from an available standard MRI template or pool of MRI scans considering the subject's digitized head surface. In the present study, we approximated two types of pseudo MRI (i.e., associated headmodel and sourcemodel) using an available pool of MRI scans with the focus on MEG source imaging. The first was the first rank pseudo MRI; that is, the MRI scan in the dataset having the lowest objective registration error (ORE) after being registered (rigid body transformation with isotropic scaling) to the subject's digitized head surface. The second was the averaged rank pseudo MRI that is generated by averaging of headmodels and sourcemodels from multiple MRI scans respectively, after being registered to the subject's digitized head surface. Subject level analysis showed that the mean upper bound of source location error for the approximated sourcemodel in reference to the real one was 10 ± 3 mm for the averaged rank pseudo MRI, which was significantly lower than the first rank pseudo MRI approach. Functional group source response in the brain to visual stimulation in the form of event-related power (ERP) at the time latency of peak amplitude showed noticeably identical source distribution for first rank pseudo MRI, averaged rank pseudo MRI, and real MRI. The source localization error for functional peak response was significantly lower for averaged rank pseudo MRI compared to first rank pseudo MRI. We conclude that it is feasible to use approximated pseudo MRI, particularly the averaged rank pseudo MRI, as a substitute for real MRI without losing the generality of the functional group source response. Computation of headmodel and sourcemodel from the subject's MRI scan is an essential step for source localization of magnetoencephalography (MEG) (or EEG) sensor signals. In the absence of a real MRI scan, pseudo MRI (i.e., associated headmodel and sourcemodel) is often approximated from an available standard MRI template or pool of MRI scans considering the subject's digitized head surface. In the present study, we approximated two types of pseudo MRI (i.e., associated headmodel and sourcemodel) using an available pool of MRI scans with the focus on MEG source imaging. The first was the first rank pseudo MRI; that is, the MRI scan in the dataset having the lowest objective registration error (ORE) after being registered (rigid body transformation with isotropic scaling) to the subject's digitized head surface. The second was the averaged rank pseudo MRI that is generated by averaging of headmodels and sourcemodels from multiple MRI scans respectively, after being registered to the subject's digitized head surface. Subject level analysis showed that the mean upper bound of source location error for the approximated sourcemodel in reference to the real one was 10 ± 3 mm for the averaged rank pseudo MRI, which was significantly lower than the first rank pseudo MRI approach. Functional group source response in the brain to visual stimulation in the form of event-related power (ERP) at the time latency of peak amplitude showed noticeably identical source distribution for first rank pseudo MRI, averaged rank pseudo MRI, and real MRI. The source localization error for functional peak response was significantly lower for averaged rank pseudo MRI compared to first rank pseudo MRI. We conclude that it is feasible to use approximated pseudo MRI, particularly the averaged rank pseudo MRI, as a substitute for real MRI without losing the generality of the functional group source response. |
Author | Kim, Min-Young Gohel, Bakul Kim, Kiwoong Kwon, Hyukchan Lim, Sanghyun |
AuthorAffiliation | Center for Biosignals, Korea Research Institute of Standards and Science Daejeon, South Korea |
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BackLink | https://www.ncbi.nlm.nih.gov/pubmed/28848418$$D View this record in MEDLINE/PubMed |
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CitedBy_id | crossref_primary_10_1016_j_cognition_2020_104247 crossref_primary_10_1093_cercor_bhad054 crossref_primary_10_1038_s41598_023_30223_9 crossref_primary_10_1002_ima_22786 crossref_primary_10_1038_s41598_024_56878_6 crossref_primary_10_1016_j_dcn_2022_101181 crossref_primary_10_3390_brainsci10020095 crossref_primary_10_1016_j_nicl_2020_102275 crossref_primary_10_1002_hbm_70148 crossref_primary_10_1111_ner_13408 crossref_primary_10_1016_j_cub_2024_04_034 crossref_primary_10_1093_braincomms_fcab296 crossref_primary_10_1186_s13229_020_00357_y crossref_primary_10_1016_j_neuroscience_2018_10_040 crossref_primary_10_1093_cercor_bhae369 crossref_primary_10_1016_j_neuroimage_2022_119061 |
Cites_doi | 10.1109/10.966602 10.1002/hbm.10133 10.1016/S0167-8655(03)00157-0 10.1016/j.neuroimage.2013.05.041 10.1002/hbm.20171 10.1016/j.neuroimage.2013.05.056 10.1016/j.neuroimage.2009.03.036 10.1016/j.neuroimage.2012.06.065 10.1016/j.neuroimage.2006.03.018 10.3109/10929080500066922 10.1155/2011/156869 10.1016/j.neuroimage.2010.05.075 10.1155/2011/879716 10.1155/2009/656092 10.1117/1.JBO.20.1.016009 10.1016/j.neuroimage.2012.10.001 10.1006/nimg.2000.0621 10.1016/j.jneumeth.2009.09.005 10.1109/IM.2001.924423 10.1016/S1388-2457(02)00030-5 10.1002/hbm.20465 10.1006/cviu.1999.0815 |
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Keywords | headmodel sourcemodel MEG source imaging ICP registration MRI pseudo MRI |
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Snippet | Computation of headmodel and sourcemodel from the subject's MRI scan is an essential step for source localization of magnetoencephalography (MEG) (or EEG)... Computation of headmodel and sourcemodel from the subject’s MRI scan is an essential step for source localization of MEG (or EEG) sensor signals. In the... |
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SubjectTerms | Datasets Digitization EEG Electrodes Functional magnetic resonance imaging headmodel ICP registration Latency Localization MEG source imaging MRI Neuroimaging Neuroscience pseudo MRI Registration Researchers Sensors sourcemodel Studies Visual stimuli |
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Title | Approximate Subject Specific Pseudo MRI from an Available MRI Dataset for MEG Source Imaging |
URI | https://www.ncbi.nlm.nih.gov/pubmed/28848418 https://www.proquest.com/docview/2294106403 https://www.proquest.com/docview/1933600192 https://pubmed.ncbi.nlm.nih.gov/PMC5550724 https://doaj.org/article/e7a989acc4594706b9968f215a220128 |
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