Mediator-Regulated Transcription through the +1 Nucleosome
Many genes are regulated at the level of a Pol II that is recruited to a nucleosome-free region upstream of the +1 nucleosome. How the Mediator coactivator complex, which functions at multiple steps, affects transcription through the promoter proximal region, including this nucleosome, remains large...
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Published in | Molecular cell Vol. 48; no. 6; pp. 837 - 848 |
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Main Authors | , , , |
Format | Journal Article |
Language | English |
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28.12.2012
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Abstract | Many genes are regulated at the level of a Pol II that is recruited to a nucleosome-free region upstream of the +1 nucleosome. How the Mediator coactivator complex, which functions at multiple steps, affects transcription through the promoter proximal region, including this nucleosome, remains largely unaddressed. We have established a fully defined in vitro assay system to delineate mechanisms for Pol II transit across the +1 nucleosome. Our results reveal cooperative functions of multiple cofactors, particularly of Mediator and elongation factor SII, in transcribing into this nucleosome. This is achieved, in part, through an unusual activity of SII that alters the intrinsic catalytic properties of promoter-proximal Pol II and, in concert with the Mediator, leads to enhancement in transcription of nucleosomal DNA. Our data provide additional mechanistic bases for Mediator function after recruitment of Pol II and, potentially, for regulation of genes controlled via nucleosome-mediated promoter-proximal pausing.
► Development of an in vitro system to analyze transcription through a +1 nucleosome ► There is functional interplay between Mediator and chromatin cofactors ► SII induces reiterative oligomeric RNA synthesis by promoter-bound Pol II ► Mediator translates this activity of SII into processive transcription |
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AbstractList | Many genes are regulated at the level of a Pol II that is recruited to a nucleosome-free region upstream of the +1 nucleosome. How the Mediator coactivator complex, which functions at multiple steps, affects transcription through the promoter proximal region, including this nucleosome, remains largely unaddressed. We have established a fully defined in vitro assay system to delineate mechanisms for Pol II transit across the +1 nucleosome. Our results reveal cooperative functions of multiple cofactors, particularly of Mediator and elongation factor SII, in transcribing into this nucleosome. This is achieved, in part, through an unusual activity of SII that alters the intrinsic catalytic properties of promoter-proximal Pol II and, in concert with the Mediator, leads to enhancement in transcription of nucleosomal DNA. Our data provide additional mechanistic bases for Mediator function after recruitment of Pol II and, potentially, for regulation of genes controlled via nucleosome-mediated promoter-proximal pausing. Many genes are regulated at the level of a Pol II that is recruited to a nucleosome-free region upstream of the +1 nucleosome. How the Mediator coactivator complex, which functions at multiple steps, affects transcription through the promoter proximal region, including this nucleosome, remains largely unaddressed. We have established a fully defined in vitro assay system to delineate mechanisms for Pol II transit across the +1 nucleosome. Our results reveal cooperative functions of multiple cofactors, particularly of Mediator and elongation factor SII, in transcribing into this nucleosome. This is achieved, in part, through an unusual activity of SII that alters the intrinsic catalytic properties of promoter-proximal Pol II and, in concert with the Mediator, leads to enhancement in transcription of nucleosomal DNA. Our data provide additional mechanistic bases for Mediator function after recruitment of Pol II and, potentially, for regulation of genes controlled via nucleosome-mediated promoter-proximal pausing. Many genes are regulated at the level of a Pol II that is recruited to a nucleosome-free region upstream of the +1 nucleosome. How the Mediator coactivator complex, which functions at multiple steps, affects transcription through the promoter proximal region, including this nucleosome, remains largely unaddressed. We have established a fully defined in vitro assay system to delineate mechanisms for Pol II transit across the +1 nucleosome. Our results reveal cooperative functions of multiple cofactors, particularly of Mediator and elongation factor SII, in transcribing into this nucleosome. This is achieved, in part, through an unusual activity of SII that alters the intrinsic catalytic properties of promoter-proximal Pol II and, in concert with the Mediator, leads to enhancement in transcription of nucleosomal DNA. Our data provide additional mechanistic bases for Mediator function after recruitment of Pol II and, potentially, for regulation of genes controlled via nucleosome-mediated promoter-proximal pausing. ► Development of an in vitro system to analyze transcription through a +1 nucleosome ► There is functional interplay between Mediator and chromatin cofactors ► SII induces reiterative oligomeric RNA synthesis by promoter-bound Pol II ► Mediator translates this activity of SII into processive transcription |
Author | Ascano, Janice M. Nock, Adam Malik, Sohail Barrero, Maria J. |
AuthorAffiliation | 2 Centre de Medicina Regenerativa, c/ Dr Aiguader, 88 E-08003 Barcelona, Spain 1 Laboratory of Biochemistry and Molecular Biology, Rockefeller University, 1230 York Ave, New York, NY, 10065, USA |
AuthorAffiliation_xml | – name: 2 Centre de Medicina Regenerativa, c/ Dr Aiguader, 88 E-08003 Barcelona, Spain – name: 1 Laboratory of Biochemistry and Molecular Biology, Rockefeller University, 1230 York Ave, New York, NY, 10065, USA |
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Snippet | Many genes are regulated at the level of a Pol II that is recruited to a nucleosome-free region upstream of the +1 nucleosome. How the Mediator coactivator... Many genes are regulated at the level of a Pol II that is recruited to a nucleosome-free region upstream of the +1 nucleosome. How the Mediator coactivator... |
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SubjectTerms | Base Sequence Cell-Free System Chromosomal Proteins, Non-Histone - chemistry cofactors DNA DNA - chemistry DNA-Binding Proteins - chemistry genes High Mobility Group Proteins - chemistry Histones - chemistry in vitro studies Mediator Complex - chemistry nucleosomes Nucleosomes - chemistry p300-CBP Transcription Factors - chemistry Promoter Regions, Genetic RNA Polymerase II - chemistry transcription (genetics) Transcription Factors - chemistry Transcription Factors, General - chemistry Transcription Initiation Site Transcription, Genetic Transcriptional Elongation Factors - chemistry |
Title | Mediator-Regulated Transcription through the +1 Nucleosome |
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