Dipterocarpoidae genomics reveal their demography and adaptations to Asian rainforests

Dipterocarpoideae species form the emergent layer of Asian rainforests. They are the indicator species for Asian rainforest distribution, but they are severely threatened. Here, to understand their adaptation and population decline, we assemble high-quality genomes of seven Dipterocarpoideae species...

Full description

Saved in:
Bibliographic Details
Published inNature communications Vol. 15; no. 1; pp. 1683 - 16
Main Authors Wang, Rong, Liu, Chao-Nan, Segar, Simon T., Jiang, Yu-Ting, Zhang, Kai-Jian, Jiang, Kai, Wang, Gang, Cai, Jing, Chen, Lu-Fan, Chen, Shan, Cheng, Jing, Compton, Stephen G., Deng, Jun-Yin, Ding, Yuan-Yuan, Du, Fang K., Hu, Xiao-Di, Hu, Xing-Hua, Kang, Ling, Li, Dong-Hai, Lu, Ling, Li, Yuan-Yuan, Tang, Liang, Tong, Xin, Wang, Zheng-Shi, Xu, Wei-Wei, Yang, Yang, Zang, Run-Guo, Zu, Zhuo-Xin, Zhang, Yuan-Ye, Chen, Xiao-Yong
Format Journal Article
LanguageEnglish
Published London Nature Publishing Group UK 23.02.2024
Nature Publishing Group
Nature Portfolio
Subjects
38/23
45
49/31
631/158/672
631/181/2474
631/181/457/649/2157
Adaptation
Anthropogenic factors
Autotetraploid
Demography
Endangered & extinct species
Endangered plants
Endangered species
Genomes
Geographical distribution
Glacial periods
Human influences
Humanities and Social Sciences
Indicator species
multidisciplinary
Population decline
Population number
Rainforests
Science
Science (multidisciplinary)
Threatened species
Online AccessGet full text

Cover

Abstract Dipterocarpoideae species form the emergent layer of Asian rainforests. They are the indicator species for Asian rainforest distribution, but they are severely threatened. Here, to understand their adaptation and population decline, we assemble high-quality genomes of seven Dipterocarpoideae species including two autotetraploid species. We estimate the divergence time between Dipterocarpoideae and Malvaceae and within Dipterocarpoideae to be 108.2 (97.8‒118.2) and 88.4 (77.7‒102.9) million years ago, and we identify a whole genome duplication event preceding dipterocarp lineage diversification. We find several genes that showed a signature of selection, likely associated with the adaptation to Asian rainforests. By resequencing of two endangered species, we detect an expansion of effective population size after the last glacial period and a recent sharp decline coinciding with the history of local human activities. Our findings contribute to understanding the diversification and adaptation of dipterocarps and highlight anthropogenic disturbances as a major factor in their endangered status. Dipterocarp trees are iconic but severely threatened species in Asian rainforests. This study assembles high-quality genomes of seven dipterocarp species to reveal the molecular basis of key adaptations and identifies a recent sharp population decline coinciding with local human activity.
AbstractList Dipterocarpoideae species form the emergent layer of Asian rainforests. They are the indicator species for Asian rainforest distribution, but they are severely threatened. Here, to understand their adaptation and population decline, we assemble high-quality genomes of seven Dipterocarpoideae species including two autotetraploid species. We estimate the divergence time between Dipterocarpoideae and Malvaceae and within Dipterocarpoideae to be 108.2 (97.8‒118.2) and 88.4 (77.7‒102.9) million years ago, and we identify a whole genome duplication event preceding dipterocarp lineage diversification. We find several genes that showed a signature of selection, likely associated with the adaptation to Asian rainforests. By resequencing of two endangered species, we detect an expansion of effective population size after the last glacial period and a recent sharp decline coinciding with the history of local human activities. Our findings contribute to understanding the diversification and adaptation of dipterocarps and highlight anthropogenic disturbances as a major factor in their endangered status.Dipterocarpoideae species form the emergent layer of Asian rainforests. They are the indicator species for Asian rainforest distribution, but they are severely threatened. Here, to understand their adaptation and population decline, we assemble high-quality genomes of seven Dipterocarpoideae species including two autotetraploid species. We estimate the divergence time between Dipterocarpoideae and Malvaceae and within Dipterocarpoideae to be 108.2 (97.8‒118.2) and 88.4 (77.7‒102.9) million years ago, and we identify a whole genome duplication event preceding dipterocarp lineage diversification. We find several genes that showed a signature of selection, likely associated with the adaptation to Asian rainforests. By resequencing of two endangered species, we detect an expansion of effective population size after the last glacial period and a recent sharp decline coinciding with the history of local human activities. Our findings contribute to understanding the diversification and adaptation of dipterocarps and highlight anthropogenic disturbances as a major factor in their endangered status.
Abstract Dipterocarpoideae species form the emergent layer of Asian rainforests. They are the indicator species for Asian rainforest distribution, but they are severely threatened. Here, to understand their adaptation and population decline, we assemble high-quality genomes of seven Dipterocarpoideae species including two autotetraploid species. We estimate the divergence time between Dipterocarpoideae and Malvaceae and within Dipterocarpoideae to be 108.2 (97.8‒118.2) and 88.4 (77.7‒102.9) million years ago, and we identify a whole genome duplication event preceding dipterocarp lineage diversification. We find several genes that showed a signature of selection, likely associated with the adaptation to Asian rainforests. By resequencing of two endangered species, we detect an expansion of effective population size after the last glacial period and a recent sharp decline coinciding with the history of local human activities. Our findings contribute to understanding the diversification and adaptation of dipterocarps and highlight anthropogenic disturbances as a major factor in their endangered status.
Dipterocarpoideae species form the emergent layer of Asian rainforests. They are the indicator species for Asian rainforest distribution, but they are severely threatened. Here, to understand their adaptation and population decline, we assemble high-quality genomes of seven Dipterocarpoideae species including two autotetraploid species. We estimate the divergence time between Dipterocarpoideae and Malvaceae and within Dipterocarpoideae to be 108.2 (97.8‒118.2) and 88.4 (77.7‒102.9) million years ago, and we identify a whole genome duplication event preceding dipterocarp lineage diversification. We find several genes that showed a signature of selection, likely associated with the adaptation to Asian rainforests. By resequencing of two endangered species, we detect an expansion of effective population size after the last glacial period and a recent sharp decline coinciding with the history of local human activities. Our findings contribute to understanding the diversification and adaptation of dipterocarps and highlight anthropogenic disturbances as a major factor in their endangered status.
Dipterocarpoideae species form the emergent layer of Asian rainforests. They are the indicator species for Asian rainforest distribution, but they are severely threatened. Here, to understand their adaptation and population decline, we assemble high-quality genomes of seven Dipterocarpoideae species including two autotetraploid species. We estimate the divergence time between Dipterocarpoideae and Malvaceae and within Dipterocarpoideae to be 108.2 (97.8‒118.2) and 88.4 (77.7‒102.9) million years ago, and we identify a whole genome duplication event preceding dipterocarp lineage diversification. We find several genes that showed a signature of selection, likely associated with the adaptation to Asian rainforests. By resequencing of two endangered species, we detect an expansion of effective population size after the last glacial period and a recent sharp decline coinciding with the history of local human activities. Our findings contribute to understanding the diversification and adaptation of dipterocarps and highlight anthropogenic disturbances as a major factor in their endangered status. Dipterocarp trees are iconic but severely threatened species in Asian rainforests. This study assembles high-quality genomes of seven dipterocarp species to reveal the molecular basis of key adaptations and identifies a recent sharp population decline coinciding with local human activity.
Dipterocarpoideae species form the emergent layer of Asian rainforests. They are the indicator species for Asian rainforest distribution, but they are severely threatened. Here, to understand their adaptation and population decline, we assemble high-quality genomes of seven Dipterocarpoideae species including two autotetraploid species. We estimate the divergence time between Dipterocarpoideae and Malvaceae and within Dipterocarpoideae to be 108.2 (97.8‒118.2) and 88.4 (77.7‒102.9) million years ago, and we identify a whole genome duplication event preceding dipterocarp lineage diversification. We find several genes that showed a signature of selection, likely associated with the adaptation to Asian rainforests. By resequencing of two endangered species, we detect an expansion of effective population size after the last glacial period and a recent sharp decline coinciding with the history of local human activities. Our findings contribute to understanding the diversification and adaptation of dipterocarps and highlight anthropogenic disturbances as a major factor in their endangered status.Dipterocarp trees are iconic but severely threatened species in Asian rainforests. This study assembles high-quality genomes of seven dipterocarp species to reveal the molecular basis of key adaptations and identifies a recent sharp population decline coinciding with local human activity.
ArticleNumber 1683
Author Zhang, Kai-Jian
Compton, Stephen G.
Hu, Xing-Hua
Chen, Lu-Fan
Li, Dong-Hai
Wang, Gang
Cheng, Jing
Chen, Shan
Jiang, Kai
Tang, Liang
Segar, Simon T.
Wang, Zheng-Shi
Cai, Jing
Hu, Xiao-Di
Li, Yuan-Yuan
Zu, Zhuo-Xin
Jiang, Yu-Ting
Wang, Rong
Kang, Ling
Zang, Run-Guo
Zhang, Yuan-Ye
Liu, Chao-Nan
Yang, Yang
Chen, Xiao-Yong
Deng, Jun-Yin
Xu, Wei-Wei
Ding, Yuan-Yuan
Tong, Xin
Du, Fang K.
Lu, Ling
Author_xml – sequence: 1
  givenname: Rong
  orcidid: 0000-0003-4652-2149
  surname: Wang
  fullname: Wang, Rong
  email: rwang@des.ecnu.edu.cn
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University
– sequence: 2
  givenname: Chao-Nan
  surname: Liu
  fullname: Liu, Chao-Nan
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University
– sequence: 3
  givenname: Simon T.
  surname: Segar
  fullname: Segar, Simon T.
  organization: Agriculture & Environment Department, Harper Adams University
– sequence: 4
  givenname: Yu-Ting
  surname: Jiang
  fullname: Jiang, Yu-Ting
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University
– sequence: 5
  givenname: Kai-Jian
  surname: Zhang
  fullname: Zhang, Kai-Jian
  organization: Novogene Bioinformatics Institute
– sequence: 6
  givenname: Kai
  orcidid: 0000-0001-9795-9290
  surname: Jiang
  fullname: Jiang, Kai
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University, Shanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Botanical Garden
– sequence: 7
  givenname: Gang
  orcidid: 0000-0003-1834-9561
  surname: Wang
  fullname: Wang, Gang
  organization: CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences
– sequence: 8
  givenname: Jing
  orcidid: 0000-0002-2496-4731
  surname: Cai
  fullname: Cai, Jing
  organization: School of Ecology and Environment, Northwestern Polytechnical University
– sequence: 9
  givenname: Lu-Fan
  surname: Chen
  fullname: Chen, Lu-Fan
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University
– sequence: 10
  givenname: Shan
  surname: Chen
  fullname: Chen, Shan
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University
– sequence: 11
  givenname: Jing
  surname: Cheng
  fullname: Cheng, Jing
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University
– sequence: 12
  givenname: Stephen G.
  orcidid: 0000-0002-1247-8058
  surname: Compton
  fullname: Compton, Stephen G.
  organization: School of Biology, University of Leeds
– sequence: 13
  givenname: Jun-Yin
  surname: Deng
  fullname: Deng, Jun-Yin
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University
– sequence: 14
  givenname: Yuan-Yuan
  surname: Ding
  fullname: Ding, Yuan-Yuan
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University
– sequence: 15
  givenname: Fang K.
  surname: Du
  fullname: Du, Fang K.
  organization: School of Ecology and Nature Conservation, Beijing Forestry University
– sequence: 16
  givenname: Xiao-Di
  surname: Hu
  fullname: Hu, Xiao-Di
  organization: Novogene Bioinformatics Institute
– sequence: 17
  givenname: Xing-Hua
  surname: Hu
  fullname: Hu, Xing-Hua
  organization: Guangxi Institute of Botany, Guangxi Zhuang Autonomous Region and the Chinese Academy of Sciences
– sequence: 18
  givenname: Ling
  surname: Kang
  fullname: Kang, Ling
  organization: Novogene Bioinformatics Institute
– sequence: 19
  givenname: Dong-Hai
  surname: Li
  fullname: Li, Dong-Hai
  organization: College of Ecology and Environment, Hainan University
– sequence: 20
  givenname: Ling
  surname: Lu
  fullname: Lu, Ling
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University
– sequence: 21
  givenname: Yuan-Yuan
  surname: Li
  fullname: Li, Yuan-Yuan
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University
– sequence: 22
  givenname: Liang
  surname: Tang
  fullname: Tang, Liang
  organization: Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants, Hainan University
– sequence: 23
  givenname: Xin
  surname: Tong
  fullname: Tong, Xin
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University, Shanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Botanical Garden
– sequence: 24
  givenname: Zheng-Shi
  surname: Wang
  fullname: Wang, Zheng-Shi
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University
– sequence: 25
  givenname: Wei-Wei
  surname: Xu
  fullname: Xu, Wei-Wei
  organization: Novogene Bioinformatics Institute
– sequence: 26
  givenname: Yang
  surname: Yang
  fullname: Yang, Yang
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University
– sequence: 27
  givenname: Run-Guo
  surname: Zang
  fullname: Zang, Run-Guo
  organization: Ecology and Nature Conservation Institute, Chinese Academy of Forestry
– sequence: 28
  givenname: Zhuo-Xin
  surname: Zu
  fullname: Zu, Zhuo-Xin
  organization: Novogene Bioinformatics Institute
– sequence: 29
  givenname: Yuan-Ye
  orcidid: 0000-0002-8636-2242
  surname: Zhang
  fullname: Zhang, Yuan-Ye
  email: zhangyuanye@xmu.edu.cn
  organization: Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, College of the Environment and Ecology, Xiamen University
– sequence: 30
  givenname: Xiao-Yong
  orcidid: 0000-0002-4795-8940
  surname: Chen
  fullname: Chen, Xiao-Yong
  email: xychen@des.ecnu.edu.cn
  organization: Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University, Shanghai Engineering Research Center of Sustainable Plant Innovation, Shanghai Institute of Pollution Control and Ecological Security, Institute of Eco-Chongming
BackLink https://www.ncbi.nlm.nih.gov/pubmed/38395938$$D View this record in MEDLINE/PubMed
BookMark eNp9kctuFDEQRS0URELID7BALbFh0-Bqv5dReEWKxAbYWjW2e-JRj93YPUj5e5x0CCiLeGOrdO6tKt-X5CjlFAh5DfQ9UKY_VA5cqp4OvOdCM9mLZ-RkoBx6UAM7-u99TM5q3dF2mAHN-QtyzDQzwjB9Qn5-jPMSSnZY5hw9hm4bUt5HV7sSfgecuuU6xNL5sM_bgvP1TYfJd-hxXnCJOdVuyd15jZi6gjGNuYS61Ffk-YhTDWf39yn58fnT94uv_dW3L5cX51e941osvQQJHoEJNXKD3LMRNkC984qhkUop9NRRJR2iAhW8UUDRjFxig0zYsFNyufr6jDs7l7jHcmMzRntXyGVrsSzRTcFKGEY9GE2FAI4bpSUTqFpTJ4zx2jevd6vXXPKvQ9vC7mN1YZowhXyodjBsoCCkZA19-wjd5UNJbdNbCuggpYJGvbmnDpt98A_j_f39Bgwr4EqutYTxAQFqb1O2a8q2pWzvUraiifQjkYtrFEsLYHpaylZpbX3SNpR_Yz-h-gP7Zbpl
CitedBy_id crossref_primary_10_1007_s11430_024_1440_3
crossref_primary_10_1016_j_plantsci_2024_112139
crossref_primary_10_1016_j_jgg_2024_03_012
crossref_primary_10_1016_j_gecco_2024_e03354
crossref_primary_10_3389_fpls_2024_1382824
crossref_primary_10_1360_SSTe_2024_0130
Cites_doi 10.1146/annurev-ecolsys-112414-054314
10.1093/molbev/msm088
10.1093/nar/gkh340
10.1093/plcell/koaa015
10.1016/j.molp.2021.08.001
10.1038/s41588-021-00971-3
10.1186/s12859-018-2485-7
10.1016/j.jplph.2018.01.009
10.1093/bioinformatics/btp324
10.1093/bioinformatics/bti1018
10.1016/j.ygeno.2006.05.008
10.1093/nar/gkg509
10.1093/bioinformatics/btr330
10.1126/science.1255274
10.1093/bioinformatics/btp120
10.1126/science.abk2177
10.1093/bioinformatics/bti797
10.1046/j.1365-294x.2000.01081.x
10.1038/nature09670
10.3389/fpls.2020.599764
10.1093/bioinformatics/bty560
10.1016/j.ajhg.2010.11.011
10.1093/nar/gkr1293
10.1073/pnas.0809865106
10.1016/j.tree.2013.04.005
10.1093/nar/gkq603
10.1038/nature10231
10.1073/pnas.95.11.5857
10.1073/pnas.1403053111
10.1371/journal.pone.0112963
10.1016/j.xplc.2022.100464
10.1093/nar/gki442
10.1111/j.1095-8312.2004.00337.x
10.1101/gr.1224503
10.1038/nature06148
10.1016/j.pbi.2012.05.004
10.1093/nar/27.2.573
10.1093/bioinformatics/btp352
10.1016/j.biocon.2020.108791
10.1093/bioinformatics/btz305
10.1101/gr.10.4.511
10.1508/cytologia.85.141
10.1093/nar/gkt1223
10.1186/1471-2105-5-59
10.1093/bioinformatics/btr011
10.1038/nbt.2727
10.1126/sciadv.aax0121
10.1126/science.1246752
10.1080/17550874.2016.1267274
10.1093/bioinformatics/btm071
10.5194/bg-11-247-2014
10.1101/gr.10.4.547
10.3389/fpls.2019.01719
10.1086/519795
10.1111/j.1095-8339.1986.tb01824.x
10.1146/annurev.genet.34.1.401
10.1038/s41559-019-0824-3
10.1016/j.palaeo.2006.01.017
10.1073/pnas.1508543112
10.1038/s41559-019-0807-4
10.1093/aob/mcs167
10.1371/journal.pone.0046688
10.1111/j.1469-8137.2009.03142.x
10.1093/nar/gkm286
10.1101/gr.073585.107
10.1016/j.ymeth.2012.05.001
10.1186/gb-2008-9-1-r7
10.1093/nar/25.5.955
10.1093/bioinformatics/btp157
10.1038/nbt.1621
10.1186/s12864-016-3197-x
10.1038/s42003-021-02682-1
10.1126/sciadv.aax8574
10.1186/1471-2105-12-102
10.1038/ng.3748
10.1073/pnas.1005507107
10.1038/nmeth.2474
10.1126/science.aag2773
10.1093/nar/gkr367
10.1101/gr.107524.110
10.1093/nar/gkg770
10.1038/s41588-018-0237-2
10.1093/bioinformatics/bth315
10.1006/jmbi.2000.5197
10.1186/1471-2105-7-62
10.1111/jse.12728
10.1038/ng.889
10.3732/ajb.0900346
10.1101/gr.094052.109
10.1007/978-1-59745-515-2_5
10.1038/s41477-019-0421-0
10.1038/s41592-020-01056-5
10.1159/000084979
10.1038/s41559-021-01469-1
10.1093/plphys/kiab245
10.1093/bioinformatics/btv351
10.1146/annurev-arplant-050213-040012
10.1038/nbt.3238
10.1073/pnas.1820663116
10.1111/eva.12569
10.1006/jmbi.1997.0951
10.1038/35002501
10.1093/bioinformatics/btl097
10.1111/pbi.13735
10.1038/s41588-022-01237-2
10.1038/s41467-018-07913-4
10.1128/MCB.01543-07
10.1073/pnas.1401526111
10.7554/eLife.38827
10.1093/nar/28.1.27
10.1093/acprof:oso/9780199639656.001.0001
10.1080/00275514.2017.1414544
ContentType Journal Article
Copyright The Author(s) 2024
2024. The Author(s).
The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
Copyright_xml – notice: The Author(s) 2024
– notice: 2024. The Author(s).
– notice: The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
DBID C6C
AAYXX
CITATION
NPM
3V.
7QL
7QP
7QR
7SN
7SS
7ST
7T5
7T7
7TM
7TO
7X7
7XB
88E
8AO
8FD
8FE
8FG
8FH
8FI
8FJ
8FK
ABUWG
AEUYN
AFKRA
ARAPS
AZQEC
BBNVY
BENPR
BGLVJ
BHPHI
C1K
CCPQU
DWQXO
FR3
FYUFA
GHDGH
GNUQQ
H94
HCIFZ
K9.
LK8
M0S
M1P
M7P
P5Z
P62
P64
PHGZM
PHGZT
PIMPY
PJZUB
PKEHL
PPXIY
PQEST
PQGLB
PQQKQ
PQUKI
RC3
SOI
7X8
DOA
DOI 10.1038/s41467-024-45836-5
DatabaseName Springer Nature OA Free Journals
CrossRef
PubMed
ProQuest Central (Corporate)
Bacteriology Abstracts (Microbiology B)
Calcium & Calcified Tissue Abstracts
Chemoreception Abstracts
Ecology Abstracts
Entomology Abstracts (Full archive)
Environment Abstracts
Immunology Abstracts
Industrial and Applied Microbiology Abstracts (Microbiology A)
Nucleic Acids Abstracts
Oncogenes and Growth Factors Abstracts
Health & Medical Collection
ProQuest Central (purchase pre-March 2016)
Medical Database (Alumni Edition)
ProQuest Pharma Collection
Technology Research Database
ProQuest SciTech Collection
ProQuest Technology Collection
ProQuest Natural Science Collection
Hospital Premium Collection
Hospital Premium Collection (Alumni Edition)
ProQuest Central (Alumni) (purchase pre-March 2016)
ProQuest Central (Alumni)
ProQuest One Sustainability
ProQuest Central UK/Ireland
Advanced Technologies & Aerospace Collection
ProQuest Central Essentials
Biological Science Collection (ProQuest)
ProQuest Central
Technology Collection
Natural Science Collection
Environmental Sciences and Pollution Management
ProQuest One Community College
ProQuest Central
Engineering Research Database
Health Research Premium Collection
Health Research Premium Collection (Alumni)
ProQuest Central Student
AIDS and Cancer Research Abstracts
ProQuest SciTech Premium Collection
ProQuest Health & Medical Complete (Alumni)
Biological Sciences
ProQuest Health & Medical Collection
Medical Database
Biological Science Database
Advanced Technologies & Aerospace Database
ProQuest Advanced Technologies & Aerospace Collection
Biotechnology and BioEngineering Abstracts
ProQuest Central Premium
ProQuest One Academic (New)
Publicly Available Content Database
ProQuest Health & Medical Research Collection
ProQuest One Academic Middle East (New)
ProQuest One Health & Nursing
ProQuest One Academic Eastern Edition (DO NOT USE)
ProQuest One Applied & Life Sciences
ProQuest One Academic
ProQuest One Academic UKI Edition
Genetics Abstracts
Environment Abstracts
MEDLINE - Academic
DOAJ Directory of Open Access Journals
DatabaseTitle CrossRef
PubMed
Publicly Available Content Database
ProQuest Central Student
Oncogenes and Growth Factors Abstracts
ProQuest Advanced Technologies & Aerospace Collection
ProQuest Central Essentials
Nucleic Acids Abstracts
SciTech Premium Collection
Environmental Sciences and Pollution Management
ProQuest One Applied & Life Sciences
ProQuest One Sustainability
Health Research Premium Collection
Natural Science Collection
Health & Medical Research Collection
Biological Science Collection
Chemoreception Abstracts
Industrial and Applied Microbiology Abstracts (Microbiology A)
ProQuest Central (New)
ProQuest Medical Library (Alumni)
Advanced Technologies & Aerospace Collection
ProQuest Biological Science Collection
ProQuest One Academic Eastern Edition
ProQuest Hospital Collection
ProQuest Technology Collection
Health Research Premium Collection (Alumni)
Biological Science Database
Ecology Abstracts
ProQuest Hospital Collection (Alumni)
Biotechnology and BioEngineering Abstracts
Entomology Abstracts
ProQuest Health & Medical Complete
ProQuest One Academic UKI Edition
Engineering Research Database
ProQuest One Academic
Calcium & Calcified Tissue Abstracts
ProQuest One Academic (New)
Technology Collection
Technology Research Database
ProQuest One Academic Middle East (New)
ProQuest Health & Medical Complete (Alumni)
ProQuest Central (Alumni Edition)
ProQuest One Community College
ProQuest One Health & Nursing
ProQuest Natural Science Collection
ProQuest Pharma Collection
ProQuest Central
ProQuest Health & Medical Research Collection
Genetics Abstracts
Health and Medicine Complete (Alumni Edition)
ProQuest Central Korea
Bacteriology Abstracts (Microbiology B)
AIDS and Cancer Research Abstracts
ProQuest SciTech Collection
Advanced Technologies & Aerospace Database
ProQuest Medical Library
Immunology Abstracts
Environment Abstracts
ProQuest Central (Alumni)
MEDLINE - Academic
DatabaseTitleList MEDLINE - Academic

PubMed

Publicly Available Content Database
CrossRef
Database_xml – sequence: 1
  dbid: C6C
  name: Springer Nature OA Free Journals
  url: http://www.springeropen.com/
  sourceTypes: Publisher
– sequence: 2
  dbid: DOA
  name: DOAJ Directory of Open Access Journals
  url: https://www.doaj.org/
  sourceTypes: Open Website
– sequence: 3
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 4
  dbid: 8FG
  name: ProQuest Technology Collection
  url: https://search.proquest.com/technologycollection1
  sourceTypes: Aggregation Database
DeliveryMethod fulltext_linktorsrc
Discipline Biology
EISSN 2041-1723
EndPage 16
ExternalDocumentID oai_doaj_org_article_612f829805514ab78635a7a4dc599d8d
38395938
10_1038_s41467_024_45836_5
Genre Journal Article
GrantInformation_xml – fundername: National Natural Science Foundation of China (National Science Foundation of China)
  grantid: 32261123001
  funderid: https://doi.org/10.13039/501100001809
– fundername: National Natural Science Foundation of China (National Science Foundation of China)
  grantid: 32261123001
GroupedDBID ---
0R~
39C
3V.
53G
5VS
70F
7X7
88E
8AO
8FE
8FG
8FH
8FI
8FJ
AAHBH
AAJSJ
ABUWG
ACGFO
ACGFS
ACIWK
ACMJI
ACPRK
ACSMW
ADBBV
ADFRT
ADMLS
ADRAZ
AENEX
AEUYN
AFKRA
AFRAH
AHMBA
AJTQC
ALIPV
ALMA_UNASSIGNED_HOLDINGS
AMTXH
AOIJS
ARAPS
ASPBG
AVWKF
AZFZN
BBNVY
BCNDV
BENPR
BGLVJ
BHPHI
BPHCQ
BVXVI
C6C
CCPQU
DIK
EBLON
EBS
EE.
EMOBN
F5P
FEDTE
FYUFA
GROUPED_DOAJ
HCIFZ
HMCUK
HVGLF
HYE
HZ~
KQ8
LGEZI
LK8
LOTEE
M1P
M48
M7P
M~E
NADUK
NAO
NXXTH
O9-
OK1
P2P
P62
PIMPY
PQQKQ
PROAC
PSQYO
RNS
RNT
RNTTT
RPM
SNYQT
SV3
TSG
UKHRP
AASML
AAYXX
CITATION
PHGZM
PHGZT
NPM
PJZUB
PPXIY
PQGLB
7QL
7QP
7QR
7SN
7SS
7ST
7T5
7T7
7TM
7TO
7XB
8FD
8FK
AARCD
AZQEC
C1K
DWQXO
FR3
GNUQQ
H94
K9.
P64
PKEHL
PQEST
PQUKI
RC3
SOI
7X8
PUEGO
ID FETCH-LOGICAL-c485t-6161da1357f49a4d3f1b10dcd73a96777ad0c076caa717ed9710a9f46a0dc9eb3
IEDL.DBID DOA
ISSN 2041-1723
IngestDate Wed Aug 27 01:26:58 EDT 2025
Fri Jul 11 08:26:33 EDT 2025
Wed Aug 13 09:13:27 EDT 2025
Mon Jul 21 06:06:09 EDT 2025
Tue Jul 01 02:11:00 EDT 2025
Thu Apr 24 22:53:03 EDT 2025
Fri Feb 21 02:37:29 EST 2025
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 1
Language English
License 2024. The Author(s).
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c485t-6161da1357f49a4d3f1b10dcd73a96777ad0c076caa717ed9710a9f46a0dc9eb3
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 14
content type line 23
ORCID 0000-0002-2496-4731
0000-0003-4652-2149
0000-0003-1834-9561
0000-0002-1247-8058
0000-0002-4795-8940
0000-0001-9795-9290
0000-0002-8636-2242
OpenAccessLink https://doaj.org/article/612f829805514ab78635a7a4dc599d8d
PMID 38395938
PQID 2931026671
PQPubID 546298
PageCount 16
ParticipantIDs doaj_primary_oai_doaj_org_article_612f829805514ab78635a7a4dc599d8d
proquest_miscellaneous_2932015663
proquest_journals_2931026671
pubmed_primary_38395938
crossref_primary_10_1038_s41467_024_45836_5
crossref_citationtrail_10_1038_s41467_024_45836_5
springer_journals_10_1038_s41467_024_45836_5
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate 2024-02-23
PublicationDateYYYYMMDD 2024-02-23
PublicationDate_xml – month: 02
  year: 2024
  text: 2024-02-23
  day: 23
PublicationDecade 2020
PublicationPlace London
PublicationPlace_xml – name: London
– name: England
PublicationTitle Nature communications
PublicationTitleAbbrev Nat Commun
PublicationTitleAlternate Nat Commun
PublicationYear 2024
Publisher Nature Publishing Group UK
Nature Publishing Group
Nature Portfolio
Publisher_xml – name: Nature Publishing Group UK
– name: Nature Publishing Group
– name: Nature Portfolio
References Eddy (CR106) 2009; 23
Quevillon (CR88) 2005; 33
Stibig, Achard, Carboni, Rasi, Miettinen (CR19) 2014; 11
Bush, Fairbanks (CR20) 2003; 108
Myers, Mittermeier, Mittermeier, Da Fonseca, Kent (CR10) 2000; 403
Hoffmann, Sgrò (CR3) 2011; 470
Monnahan (CR114) 2019; 3
CR30
Tian (CR13) 2022; 3
Parisod, Holderegger, Brochmann (CR47) 2010; 186
Hung (CR51) 2014; 111
Li, Durbin (CR64) 2009; 25
Majoros, Pertea, Salzberg (CR82) 2004; 20
Finn, Clements, Eddy (CR89) 2011; 39
Song, Shen-Tu, Dong (CR50) 2020; 11
Parra, Bradnam, Korf (CR67) 2007; 23
(CR37) 1960; 2
Konuma, Tsumura, Lee, Lee, Okuda (CR54) 2000; 9
Maria, Gangavarapu, Johnson, Prakash, Prakash (CR28) 2007; 27
Vega, García-Barrera, Perrilliat, Coutiño, Mariño-Pérez (CR26) 2006; 23
Wilcove, Giam, Edwards, Fisher, Koh (CR11) 2013; 28
Roach, Schmidt, Borneman (CR62) 2018; 19
Wang (CR29) 2018; 222
Wang, Zhang, Zhang, Zhu, Yu (CR99) 2010; 8
Kozlov, Darriba, Flouri, Morel, Stamatakis (CR97) 2019; 35
Remm, Storm, Sonnhammer (CR113) 2001; 314
Cheng, Concepcion, Feng, Zhang, Li (CR61) 2021; 18
Tarailo-Graovac, Ns (CR73) 2009; 4
Van de Peer, Ashman, Soltis, Soltis (CR43) 2021; 33
Yang, Lee, Goddard, Visscher (CR121) 2011; 88
Liu (CR34) 2021; 14
Yang (CR9) 2018; 9
Terhorst, Kamm, Song (CR36) 2017; 49
Marcais, Kingsford (CR56) 2011; 27
Tong (CR5) 2021; 60
Ng, Henikoff (CR117) 2003; 31
Purcell (CR118) 2007; 81
Bell, Soltis, Soltis (CR25) 2010; 97
Korf (CR84) 2004; 5
Haas (CR87) 2008; 9
Ng (CR44) 2016; 9
Price, Jones, Pevzner (CR72) 2005; 21
Haas (CR77) 2003; 31
Finn (CR91) 2014; 42
Edgar (CR96) 2004; 32
Zhang (CR65) 2018; 50
Shi, Liu (CR18) 2021; 187
Cui, Tsuda, Parker (CR33) 2015; 66
Wang (CR69) 2012; 40
Raes (CR12) 2014; 111
Li (CR40) 2019; 5
Hansen (CR55) 2020; 6
Danecek (CR115) 2011; 27
Hu (CR52) 2022; 54
Zhang, Xiao, Wang (CR112) 2001; 21
Liu, Li, Wang, Chen (CR39) 2020; 251
Bansal (CR17) 2022; 375
Vilella (CR120) 2009; 19
Brochmann (CR42) 2004; 82
Mulder, Apweiler (CR90) 2007; 396
Ng (CR15) 2021; 4
Li (CR103) 2016; 17
Walker (CR60) 2014; 9
Kaur, Jong, Sands, Soepadmo (CR45) 1986; 92
Burton (CR66) 2013; 31
Li, Durbin (CR35) 2011; 475
Svenning, Eiserhardt, Normand, Ordonez, Sandel (CR4) 2015; 46
Li, Stoeckert, Roos (CR95) 2003; 13
Choi, Sims, Murphy, Miller, Chan (CR116) 2012; 7
Denoeud (CR93) 2014; 345
Schultz, Milpetz, Bork, Ponting (CR104) 1998; 95
Otto, Whitton (CR53) 2000; 34
Wurster (CR21) 2010; 107
Lowe, Eddy (CR75) 1997; 25
Stanke, Schöffmann, Morgenstern, Waack (CR80) 2006; 7
Kanehisa, Goto (CR92) 2000; 28
Burge, Karlin (CR81) 1997; 268
Yang (CR98) 2007; 24
McKenna (CR110) 2010; 20
Yu, Zheng, Wang, Wang, Su (CR85) 2006; 88
Oginuma, Lum, Tobe (CR46) 2020; 85
Jaillon (CR100) 2007; 449
Pimm (CR2) 2014; 344
Birney, Durbin (CR86) 2000; 10
Siepielski (CR8) 2017; 355
Simão, Waterhouse, Ioannidis, Kriventseva, Zdobnov (CR68) 2015; 31
Wang, Li, Hakonarson (CR111) 2010; 38
Razgour (CR7) 2019; 116
Fu (CR41) 2018; 7
Chin (CR59) 2013; 10
Dassanayake (CR48) 2011; 43
Tang (CR101) 2011; 12
Jurka (CR70) 2005; 110
Trapnell (CR79) 2010; 28
CR16
Alexander, Novembre, Lange (CR119) 2009; 19
Cannon, Morley, Bush (CR23) 2009; 106
Parra, Blanco, Guigó (CR83) 2000; 10
Hu (CR107) 2020; 41
Belton (CR63) 2012; 58
Marques (CR6) 2019; 3
Beck, Heard, Mbengue, Robatzek (CR32) 2012; 15
Nawrocki, Kolbe, Eddy (CR76) 2009; 25
Li (CR109) 2009; 25
Chen, Zhou, Chen, Gu (CR108) 2018; 34
Anhuf (CR22) 2006; 239
Dainese (CR1) 2019; 5
Flanagan, Forester, Latch, Aitken, Hoban (CR38) 2018; 11
Trapnell, Pachter, Salzberg (CR78) 2009; 25
Xu, Wang (CR71) 2007; 35
Wang (CR94) 2022; 54
Wang (CR14) 2022; 20
CR24
Su, Lin, Lai (CR31) 2020; 10
Berlin (CR58) 2015; 33
McDonnell, Jiang, Keating, Berger (CR105) 2006; 22
Benson (CR74) 1999; 27
De Bie, Cristianini, Demuth, Hahn (CR102) 2006; 22
Vallerga, Mansilla, Federico, Bertolin, Gottifredi (CR27) 2015; 112
Wang (CR49) 2021; 5
Kron, Husband (CR57) 2012; 110
45836_CR30
MJ Wang (45836_CR94) 2022; 54
Z Xu (45836_CR71) 2007; 35
P Kron (45836_CR57) 2012; 110
C Parisod (45836_CR47) 2010; 186
RC Edgar (45836_CR96) 2004; 32
SR Eddy (45836_CR106) 2009; 23
RD Finn (45836_CR89) 2011; 39
D Anhuf (45836_CR22) 2006; 239
K Wang (45836_CR111) 2010; 38
CS Chin (45836_CR59) 2013; 10
TM Lowe (45836_CR75) 1997; 25
SJ Wang (45836_CR29) 2018; 222
45836_CR24
Guangdong Museum. (45836_CR37) 1960; 2
O Jaillon (45836_CR100) 2007; 449
JM Belton (45836_CR63) 2012; 58
P Danecek (45836_CR115) 2011; 27
M Kanehisa (45836_CR92) 2000; 28
SP Otto (45836_CR53) 2000; 34
I Korf (45836_CR84) 2004; 5
S Purcell (45836_CR118) 2007; 81
N Myers (45836_CR10) 2000; 403
ABG Bush (45836_CR20) 2003; 108
R Wang (45836_CR49) 2021; 5
HY Cheng (45836_CR61) 2021; 18
FJ Vega (45836_CR26) 2006; 23
HT Cui (45836_CR33) 2015; 66
M Beck (45836_CR32) 2012; 15
C Brochmann (45836_CR42) 2004; 82
AM Siepielski (45836_CR8) 2017; 355
M Tarailo-Graovac (45836_CR73) 2009; 4
X Tong (45836_CR5) 2021; 60
EP Nawrocki (45836_CR76) 2009; 25
JC Svenning (45836_CR4) 2015; 46
C Trapnell (45836_CR78) 2009; 25
RD Finn (45836_CR91) 2014; 42
BJ Haas (45836_CR87) 2008; 9
E Birney (45836_CR86) 2000; 10
BJ Haas (45836_CR77) 2003; 31
G Parra (45836_CR67) 2007; 23
H Li (45836_CR35) 2011; 475
H Li (45836_CR109) 2009; 25
SL Pimm (45836_CR2) 2014; 344
FA Simão (45836_CR68) 2015; 31
AA Hoffmann (45836_CR3) 2011; 470
L Li (45836_CR95) 2003; 13
C Trapnell (45836_CR79) 2010; 28
CH Ng (45836_CR44) 2016; 9
HT Li (45836_CR40) 2019; 5
Y Choi (45836_CR116) 2012; 7
SP Flanagan (45836_CR38) 2018; 11
MC Hansen (45836_CR55) 2020; 6
J Yang (45836_CR121) 2011; 88
SF Chen (45836_CR108) 2018; 34
PH Su (45836_CR31) 2020; 10
Y Liu (45836_CR34) 2021; 14
MJ Roach (45836_CR62) 2018; 19
AM Kozlov (45836_CR97) 2019; 35
JN Burton (45836_CR66) 2013; 31
N Mulder (45836_CR90) 2007; 396
MB Vallerga (45836_CR27) 2015; 112
Y Van de Peer (45836_CR43) 2021; 33
BJ Walker (45836_CR60) 2014; 9
JS Zhang (45836_CR65) 2018; 50
J Jurka (45836_CR70) 2005; 110
L Zhang (45836_CR112) 2001; 21
G Parra (45836_CR83) 2000; 10
AJ Vilella (45836_CR120) 2009; 19
E Quevillon (45836_CR88) 2005; 33
ZZ Tian (45836_CR13) 2022; 3
K Oginuma (45836_CR46) 2020; 85
KKS Ng (45836_CR15) 2021; 4
G Hu (45836_CR52) 2022; 54
DH Alexander (45836_CR119) 2009; 19
A Marques (45836_CR6) 2019; 3
DP Wang (45836_CR99) 2010; 8
PC Li (45836_CR103) 2016; 17
PC Ng (45836_CR117) 2003; 31
CD Bell (45836_CR25) 2010; 97
AL Price (45836_CR72) 2005; 21
DS Wilcove (45836_CR11) 2013; 28
K Berlin (45836_CR58) 2015; 33
G Benson (45836_CR74) 1999; 27
HJ Stibig (45836_CR19) 2014; 11
SRS Maria (45836_CR28) 2007; 27
A Konuma (45836_CR54) 2000; 9
A McKenna (45836_CR110) 2010; 20
T De Bie (45836_CR102) 2006; 22
C Shi (45836_CR18) 2021; 187
CM Hung (45836_CR51) 2014; 111
45836_CR16
X Hu (45836_CR107) 2020; 41
H Li (45836_CR64) 2009; 25
M Bansal (45836_CR17) 2022; 375
HB Tang (45836_CR101) 2011; 12
CH Cannon (45836_CR23) 2009; 106
Q Fu (45836_CR41) 2018; 7
N Raes (45836_CR12) 2014; 111
YZ Yang (45836_CR9) 2018; 9
J Terhorst (45836_CR36) 2017; 49
AV McDonnell (45836_CR105) 2006; 22
CN Liu (45836_CR39) 2020; 251
SB Wang (45836_CR14) 2022; 20
YB Song (45836_CR50) 2020; 11
J Schultz (45836_CR104) 1998; 95
M Dainese (45836_CR1) 2019; 5
P Monnahan (45836_CR114) 2019; 3
CM Wurster (45836_CR21) 2010; 107
WH Majoros (45836_CR82) 2004; 20
M Remm (45836_CR113) 2001; 314
O Razgour (45836_CR7) 2019; 116
XJ Yu (45836_CR85) 2006; 88
YP Wang (45836_CR69) 2012; 40
M Stanke (45836_CR80) 2006; 7
G Marcais (45836_CR56) 2011; 27
M Dassanayake (45836_CR48) 2011; 43
F Denoeud (45836_CR93) 2014; 345
A Kaur (45836_CR45) 1986; 92
C Burge (45836_CR81) 1997; 268
ZH Yang (45836_CR98) 2007; 24
References_xml – volume: 46
  start-page: 551
  year: 2015
  end-page: 572
  ident: CR4
  article-title: The influence of paleoclimate on present-day patterns in biodiversity and ecosystems
  publication-title: Annu. Rev. Ecol. Evol. Syst.
  doi: 10.1146/annurev-ecolsys-112414-054314
– volume: 24
  start-page: 1586
  year: 2007
  end-page: 1591
  ident: CR98
  article-title: PAML 4: phylogenetic analysis by maximum likelihood
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msm088
– volume: 32
  start-page: 1792
  year: 2004
  end-page: 1797
  ident: CR96
  article-title: MUSCLE: multiple sequence alignment with high accuracy and high throughput
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkh340
– volume: 33
  start-page: 11
  year: 2021
  end-page: 26
  ident: CR43
  article-title: Polyploidy: an evolutionary and ecological force in stressful times
  publication-title: Plant Cell
  doi: 10.1093/plcell/koaa015
– ident: CR16
– volume: 14
  start-page: 2015
  year: 2021
  end-page: 2031
  ident: CR34
  article-title: An angiosperm atlas reveals that gene reduction is associated with ecological specialization and signal transduction component deletion
  publication-title: Mol. Plant
  doi: 10.1016/j.molp.2021.08.001
– volume: 54
  start-page: 73
  year: 2022
  end-page: 83
  ident: CR52
  article-title: Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivars
  publication-title: Nat. Genet.
  doi: 10.1038/s41588-021-00971-3
– volume: 19
  year: 2018
  ident: CR62
  article-title: Purge Haplotigs: allelic contig reassignment for third-gen diploid genome assemblies
  publication-title: BMC Bioinforma.
  doi: 10.1186/s12859-018-2485-7
– volume: 222
  start-page: 103
  year: 2018
  end-page: 112
  ident: CR29
  article-title: Overexpression of a tomato carotenoid ε-hydroxylase gene ( ) improved the drought tolerance of transgenic tobacco
  publication-title: J. Plant Physiol.
  doi: 10.1016/j.jplph.2018.01.009
– volume: 25
  start-page: 1754
  year: 2009
  end-page: 1760
  ident: CR64
  article-title: Fast and accurate short read alignment with Burrows-Wheeler transform
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp324
– volume: 21
  start-page: i351
  year: 2005
  end-page: i358
  ident: CR72
  article-title: De novo identification of repeat families in large genomes
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bti1018
– volume: 88
  start-page: 745
  year: 2006
  end-page: 751
  ident: CR85
  article-title: Detecting lineage-specific adaptive evolution of brain-expressed genes in human using rhesus macaque as outgroup
  publication-title: Genomics
  doi: 10.1016/j.ygeno.2006.05.008
– volume: 31
  start-page: 3812
  year: 2003
  end-page: 3814
  ident: CR117
  article-title: SIFT: predicting amino acid changes that affect protein function
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkg509
– volume: 27
  start-page: 2156
  year: 2011
  end-page: 2158
  ident: CR115
  article-title: The variant call format and VCFtools
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btr330
– volume: 345
  start-page: 1181
  year: 2014
  end-page: 1184
  ident: CR93
  article-title: The coffee genome provides insight into the convergent evolution of caffeine biosynthesis
  publication-title: Science
  doi: 10.1126/science.1255274
– volume: 25
  start-page: 1105
  year: 2009
  end-page: 1111
  ident: CR78
  article-title: TopHat: discovering splice junctions with RNA-Seq
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp120
– volume: 375
  start-page: 455
  year: 2022
  end-page: 460
  ident: CR17
  article-title: Southeast Asian Dipterocarp origin and diversification driven by Africa-India floristic interchange
  publication-title: Science
  doi: 10.1126/science.abk2177
– volume: 22
  start-page: 356
  year: 2006
  end-page: 358
  ident: CR105
  article-title: Paircoil2: improved prediction of coiled coils from sequence
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bti797
– volume: 9
  start-page: 1843
  year: 2000
  end-page: 1852
  ident: CR54
  article-title: Estimation of gene flow in the tropical-rainforest tree (Dipterocarpaceae), inferred from paternity analysis
  publication-title: Mol. Ecol.
  doi: 10.1046/j.1365-294x.2000.01081.x
– volume: 470
  start-page: 479
  year: 2011
  end-page: 485
  ident: CR3
  article-title: Climate change and evolutionary adaptation
  publication-title: Nature
  doi: 10.1038/nature09670
– volume: 11
  year: 2020
  ident: CR50
  article-title: Intraspecific variation of samara dispersal traits in the endangered tropical tree (Dipterocarpaceae)
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2020.599764
– volume: 34
  start-page: i884
  year: 2018
  end-page: i890
  ident: CR108
  article-title: Fastp: an ultra-fast all-in-one FASTQ preprocessor
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bty560
– volume: 88
  start-page: 76
  year: 2011
  end-page: 82
  ident: CR121
  article-title: GCTA: a tool for genome-wide complex trait analysis
  publication-title: Am. J. Hum. Genet.
  doi: 10.1016/j.ajhg.2010.11.011
– volume: 40
  start-page: e49
  year: 2012
  ident: CR69
  article-title: : a toolkit for detection and evolutionary analysis of gene synteny and collinearity
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkr1293
– volume: 106
  start-page: 11188
  year: 2009
  end-page: 11193
  ident: CR23
  article-title: The current refugial rainforests of Sundaland are unrepresentative of their biogeographic past and highly vulnerable to disturbance
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.0809865106
– volume: 28
  start-page: 531
  year: 2013
  end-page: 540
  ident: CR11
  article-title: Navjot’s nightmare revisited: logging, agriculture, and biodiversity in Southeast Asia
  publication-title: Trends Ecol. Evol.
  doi: 10.1016/j.tree.2013.04.005
– volume: 38
  start-page: e164
  year: 2010
  ident: CR111
  article-title: ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkq603
– volume: 475
  start-page: 493
  year: 2011
  end-page: 496
  ident: CR35
  article-title: Inference of human population history from individual whole-genome sequences
  publication-title: Nature
  doi: 10.1038/nature10231
– volume: 95
  start-page: 5857
  year: 1998
  end-page: 5864
  ident: CR104
  article-title: SMART, a simple modular architecture research tool: identification of signaling domains
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.95.11.5857
– volume: 111
  start-page: 16790
  year: 2014
  end-page: 16795
  ident: CR12
  article-title: Historical distribution of Sundaland’s Dipterocarp rainforests at Quaternary glacial maxima
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1403053111
– volume: 9
  start-page: e112963
  year: 2014
  ident: CR60
  article-title: Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement
  publication-title: PLoS One
  doi: 10.1371/journal.pone.0112963
– volume: 3
  start-page: 100464
  year: 2022
  ident: CR13
  article-title: Thirteen Dipterocarpoideae genomes provide insights into their evolution and borneol biosynthesis
  publication-title: Plant Commun.
  doi: 10.1016/j.xplc.2022.100464
– volume: 33
  start-page: w116
  year: 2005
  end-page: w120
  ident: CR88
  article-title: InterProScan: protein domains identifier
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gki442
– volume: 82
  start-page: 521
  year: 2004
  end-page: 536
  ident: CR42
  article-title: Polyploidy in arctic plants
  publication-title: Biol. J. Linn. Soc.
  doi: 10.1111/j.1095-8312.2004.00337.x
– volume: 13
  start-page: 2178
  year: 2003
  end-page: 2189
  ident: CR95
  article-title: OrthoMCL: identification of ortholog groups for eukaryotic genomes
  publication-title: Genome Res.
  doi: 10.1101/gr.1224503
– ident: CR30
– volume: 449
  start-page: 463
  year: 2007
  end-page: 467
  ident: CR100
  article-title: The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
  publication-title: Nature
  doi: 10.1038/nature06148
– volume: 15
  start-page: 367
  year: 2012
  end-page: 374
  ident: CR32
  article-title: The INs and OUTs of pattern recognition receptors at the cell surface
  publication-title: Curr. Opin. Plant Biol.
  doi: 10.1016/j.pbi.2012.05.004
– volume: 27
  start-page: 573
  year: 1999
  end-page: 580
  ident: CR74
  article-title: Tandem repeats finder: a program to analyze DNA sequences
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/27.2.573
– volume: 4
  start-page: 4.10.11
  year: 2009
  end-page: 4.10.14
  ident: CR73
  article-title: Using RepeatMasker to identify repetitive elements in genomic sequences
  publication-title: Curr. Protoc. Bioinforma.
– volume: 25
  start-page: 2078
  year: 2009
  end-page: 2079
  ident: CR109
  article-title: The sequence alignment/map format and SAMtools
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp352
– volume: 251
  year: 2020
  ident: CR39
  article-title: Genetic factors are less considered than demographic characters in delisting species
  publication-title: Biol. Conserv.
  doi: 10.1016/j.biocon.2020.108791
– volume: 35
  start-page: 4453
  year: 2019
  end-page: 4455
  ident: CR97
  article-title: RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btz305
– volume: 10
  start-page: 511
  year: 2000
  end-page: 515
  ident: CR83
  article-title: GeneID in
  publication-title: Genome Res.
  doi: 10.1101/gr.10.4.511
– volume: 85
  start-page: 141
  year: 2020
  end-page: 149
  ident: CR46
  article-title: Karyomorphology and Its Evolution in Dipterocarpaceae (Malvales)
  publication-title: Cytologia
  doi: 10.1508/cytologia.85.141
– volume: 21
  start-page: 277
  year: 2001
  end-page: 280
  ident: CR112
  article-title: Ex situ conservation of
  publication-title: Guihaia
– volume: 42
  start-page: d222
  year: 2014
  end-page: d230
  ident: CR91
  article-title: Pfam: the protein families database
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkt1223
– volume: 5
  year: 2004
  ident: CR84
  article-title: Gene finding in novel genomes
  publication-title: BMC Bioinforma.
  doi: 10.1186/1471-2105-5-59
– volume: 2
  start-page: 121
  year: 1960
  end-page: 131
  ident: CR37
  article-title: The primitive cultural relics on Hainan Island
  publication-title: Acta Archaeological Sin.
– volume: 27
  start-page: 764
  year: 2011
  end-page: 770
  ident: CR56
  article-title: A fast, lock-free approach for efficient parallel counting of occurrences of -mers
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btr011
– volume: 23
  start-page: 323
  year: 2006
  end-page: 333
  ident: CR26
  article-title: El Espinal, a new plattenkalk facies locality from the Lower Cretaceous Sierra Madre Formation, Chiapas, southeastern Mexico
  publication-title: Rev. Mexicana de. Cienc. Geol.ógicas
– volume: 31
  start-page: 1119
  year: 2013
  end-page: 1125
  ident: CR66
  article-title: Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.2727
– volume: 5
  start-page: eaax0121
  year: 2019
  ident: CR1
  article-title: A global synthesis reveals biodiversity-mediated benefits for crop production
  publication-title: Sci. Adv.
  doi: 10.1126/sciadv.aax0121
– volume: 344
  start-page: 1246752
  year: 2014
  ident: CR2
  article-title: The biodiversity of species and their rates of extinction, distribution, and protection
  publication-title: Science
  doi: 10.1126/science.1246752
– volume: 9
  start-page: 437
  year: 2016
  end-page: 446
  ident: CR44
  article-title: Genome size variation and evolution in Dipterocarpaceae
  publication-title: Plant Ecol. Diversity
  doi: 10.1080/17550874.2016.1267274
– volume: 23
  start-page: 1061
  year: 2007
  end-page: 1067
  ident: CR67
  article-title: CEGMA: a pipeline to accurately annotate core genes in eukaryotic genornes
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btm071
– volume: 11
  start-page: 247
  year: 2014
  end-page: 258
  ident: CR19
  article-title: Change in tropical forest cover of Southeast Asia from 1990 to 2010
  publication-title: Biogeosciences
  doi: 10.5194/bg-11-247-2014
– volume: 10
  start-page: 547
  year: 2000
  end-page: 548
  ident: CR86
  article-title: Using GeneWise in the annotation experiment
  publication-title: Genome Res.
  doi: 10.1101/gr.10.4.547
– volume: 10
  start-page: 1719
  year: 2020
  ident: CR31
  article-title: Two Arabidopsis chloroplast GrpE homologues exhibit distinct biological activities and can form homo-and hetero-oligomers
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2019.01719
– volume: 81
  start-page: 559
  year: 2007
  end-page: 575
  ident: CR118
  article-title: PLINK: a tool set for whole-genome association and population-based linkage analyses
  publication-title: Am. J. Hum. Genet.
  doi: 10.1086/519795
– ident: CR24
– volume: 92
  start-page: 75
  year: 1986
  end-page: 88
  ident: CR45
  article-title: Cytoembryology of some Malaysian dipterocarps, with some evidence of apomixis
  publication-title: Botanical J. Linn. Soc.
  doi: 10.1111/j.1095-8339.1986.tb01824.x
– volume: 41
  start-page: 1939
  year: 2020
  end-page: 1945
  ident: CR107
  article-title: Population structure and dynamics of , a plant endemic to Ganshiling, Hainan island
  publication-title: Chin. J. Tropical Crops
– volume: 34
  start-page: 401
  year: 2000
  end-page: 437
  ident: CR53
  article-title: Polyploid incidence and evolution
  publication-title: Annu. Rev. Genet.
  doi: 10.1146/annurev.genet.34.1.401
– volume: 3
  start-page: 628
  year: 2019
  end-page: 637
  ident: CR6
  article-title: Increasing impacts of land use on biodiversity and carbon sequestration driven by population and economic growth
  publication-title: Nat. Ecol. Evol.
  doi: 10.1038/s41559-019-0824-3
– volume: 239
  start-page: 510
  year: 2006
  end-page: 527
  ident: CR22
  article-title: Paleo-environmental change in Amazonian and African rainforest during the LGM
  publication-title: Palaeogeogr. Palaeoclimatol. Palaeoecol.
  doi: 10.1016/j.palaeo.2006.01.017
– volume: 112
  start-page: e6624
  year: 2015
  end-page: e6633
  ident: CR27
  article-title: Rad51 recombinase prevents Mre11 nuclease-dependent degradation and excessive PrimPol-mediated elongation of nascent DNA after UV irradiation
  publication-title: Proc. Natl Acad. Sci.
  doi: 10.1073/pnas.1508543112
– volume: 3
  start-page: 457
  year: 2019
  end-page: 468
  ident: CR114
  article-title: Pervasive population genomic consequences of genome duplication in
  publication-title: Nat. Ecol. Evol.
  doi: 10.1038/s41559-019-0807-4
– volume: 110
  start-page: 1067
  year: 2012
  end-page: 1078
  ident: CR57
  article-title: Using flow cytometry to estimate pollen DNA content: improved methodology and applications
  publication-title: Ann. Bot.
  doi: 10.1093/aob/mcs167
– volume: 7
  start-page: e46688
  year: 2012
  ident: CR116
  article-title: Predicting the functional effect of amino acid substitutions and indels
  publication-title: PloS ONE
  doi: 10.1371/journal.pone.0046688
– volume: 186
  start-page: 5
  year: 2010
  end-page: 17
  ident: CR47
  article-title: Evolutionary consequences of autopolyploidy
  publication-title: N. Phytologist
  doi: 10.1111/j.1469-8137.2009.03142.x
– volume: 35
  start-page: w265
  year: 2007
  end-page: w268
  ident: CR71
  article-title: LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkm286
– volume: 19
  start-page: 327
  year: 2009
  end-page: 335
  ident: CR120
  article-title: EnsemblCompara GeneTrees: complete, duplication-aware phylogenetic trees in vertebrates
  publication-title: Genome Res.
  doi: 10.1101/gr.073585.107
– volume: 58
  start-page: 268
  year: 2012
  end-page: 276
  ident: CR63
  article-title: Hi-C: a comprehensive technique to capture the conformation of genomes
  publication-title: Methods
  doi: 10.1016/j.ymeth.2012.05.001
– volume: 9
  year: 2008
  ident: CR87
  article-title: Automated eukaryotic gene structure annotation using EVidenceModeler and the program to assemble spliced alignments
  publication-title: Genome Biol.
  doi: 10.1186/gb-2008-9-1-r7
– volume: 25
  start-page: 955
  year: 1997
  end-page: 964
  ident: CR75
  article-title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/25.5.955
– volume: 25
  start-page: 1335
  year: 2009
  end-page: 1337
  ident: CR76
  article-title: Infernal 1.0: inference of RNA alignments
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp157
– volume: 28
  start-page: 511
  year: 2010
  end-page: 515
  ident: CR79
  article-title: Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.1621
– volume: 17
  year: 2016
  ident: CR103
  article-title: RGAugury: a pipeline for genome-wide prediction of resistance gene analogs (RGAs) in plants
  publication-title: BMC Genomics
  doi: 10.1186/s12864-016-3197-x
– volume: 4
  start-page: 1166
  year: 2021
  ident: CR15
  article-title: The genome of (Dipterocarpaceae) highlights the ecological relevance of drought in aseasonal tropical rainforests
  publication-title: Commun. Biol.
  doi: 10.1038/s42003-021-02682-1
– volume: 6
  start-page: eaax8574
  year: 2020
  ident: CR55
  article-title: The fate of tropical forest fragments
  publication-title: Sci. Adv.
  doi: 10.1126/sciadv.aax8574
– volume: 12
  year: 2011
  ident: CR101
  article-title: Screening synteny blocks in pairwise genome comparisons through integer programming
  publication-title: BMC Bioinforma.
  doi: 10.1186/1471-2105-12-102
– volume: 49
  start-page: 303
  year: 2017
  end-page: 309
  ident: CR36
  article-title: Robust and scalable inference of population history froth hundreds of unphased whole genomes
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3748
– volume: 107
  start-page: 15508
  year: 2010
  end-page: 15511
  ident: CR21
  article-title: Forest contraction in north equatorial Southeast Asia during the Last Glacial Period
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1005507107
– volume: 10
  start-page: 563
  year: 2013
  end-page: 569
  ident: CR59
  article-title: Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
  publication-title: Nat. Methods
  doi: 10.1038/nmeth.2474
– volume: 355
  start-page: 959
  year: 2017
  end-page: 962
  ident: CR8
  article-title: Precipitation drives global variation in natural selection
  publication-title: Science
  doi: 10.1126/science.aag2773
– volume: 39
  start-page: w29
  year: 2011
  end-page: w37
  ident: CR89
  article-title: HMMER web server: interactive sequence similarity searching
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkr367
– volume: 20
  start-page: 1297
  year: 2010
  end-page: 1303
  ident: CR110
  article-title: The genome analysis toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data
  publication-title: Genome Res.
  doi: 10.1101/gr.107524.110
– volume: 31
  start-page: 5654
  year: 2003
  end-page: 5666
  ident: CR77
  article-title: Improving the genome annotation using maximal transcript alignment assemblies
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkg770
– volume: 50
  start-page: 1565
  year: 2018
  end-page: 1573
  ident: CR65
  article-title: Allele-defined genome of the autopolyploid sugarcane L
  publication-title: Nat. Genet.
  doi: 10.1038/s41588-018-0237-2
– volume: 20
  start-page: 2878
  year: 2004
  end-page: 2879
  ident: CR82
  article-title: TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bth315
– volume: 314
  start-page: 1041
  year: 2001
  end-page: 1052
  ident: CR113
  article-title: Automatic clustering of orthologs and in-paralogs from pairwise species comparisons
  publication-title: J. Mol. Biol.
  doi: 10.1006/jmbi.2000.5197
– volume: 108
  start-page: 4446
  year: 2003
  ident: CR20
  article-title: Exposing the Sunda shelf: tropical responses to eustatic sea level change
  publication-title: J. Geophys. Res.
– volume: 7
  year: 2006
  ident: CR80
  article-title: Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources
  publication-title: BMC Bioinforma.
  doi: 10.1186/1471-2105-7-62
– volume: 60
  start-page: 1158
  year: 2021
  end-page: 1171
  ident: CR5
  article-title: Back to the brink: phylogeography and demographic history of the endangered
  publication-title: J. Syst. Evol.
  doi: 10.1111/jse.12728
– volume: 43
  start-page: 913
  year: 2011
  end-page: 918
  ident: CR48
  article-title: The genome of the extremophile crucifer
  publication-title: Nat. Genet.
  doi: 10.1038/ng.889
– volume: 97
  start-page: 1296
  year: 2010
  end-page: 1303
  ident: CR25
  article-title: The age and diversification of the angiosperms re-revisited
  publication-title: Am. J. Bot.
  doi: 10.3732/ajb.0900346
– volume: 19
  start-page: 1655
  year: 2009
  end-page: 1664
  ident: CR119
  article-title: Fast model-based estimation of ancestry in unrelated individuals
  publication-title: Genome Res.
  doi: 10.1101/gr.094052.109
– volume: 396
  start-page: 59
  year: 2007
  end-page: 70
  ident: CR90
  article-title: InterPro and InterProScan: tools for protein sequence classification and comparison
  publication-title: Methods Mol. Biol.
  doi: 10.1007/978-1-59745-515-2_5
– volume: 5
  start-page: 461
  year: 2019
  end-page: 470
  ident: CR40
  article-title: Origin of angiosperms and the puzzle of the Jurassic gap
  publication-title: Nat. Plants
  doi: 10.1038/s41477-019-0421-0
– volume: 18
  start-page: 170
  year: 2021
  end-page: 175
  ident: CR61
  article-title: Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm
  publication-title: Nat. Methods
  doi: 10.1038/s41592-020-01056-5
– volume: 110
  start-page: 462
  year: 2005
  end-page: 467
  ident: CR70
  article-title: Repbase update, a database of eukaryotic repetitive elements
  publication-title: Cytogenetic Genome Res.
  doi: 10.1159/000084979
– volume: 5
  start-page: 974
  year: 2021
  end-page: 986
  ident: CR49
  article-title: Molecular mechanisms of mutualistic and antagonistic interactions in a plant-pollinator association
  publication-title: Nat. Ecol. Evol.
  doi: 10.1038/s41559-021-01469-1
– volume: 187
  start-page: 1096
  year: 2021
  end-page: 1103
  ident: CR18
  article-title: How plants protect themselves from ultraviolet-B radiation stress
  publication-title: Plant Physiol.
  doi: 10.1093/plphys/kiab245
– volume: 31
  start-page: 3210
  year: 2015
  end-page: 3212
  ident: CR68
  article-title: BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btv351
– volume: 66
  start-page: 487
  year: 2015
  end-page: 511
  ident: CR33
  article-title: Effector-triggered immunity: from pathogen perception to robust defense
  publication-title: Annu. Rev. Plant Biol.
  doi: 10.1146/annurev-arplant-050213-040012
– volume: 33
  start-page: 623
  year: 2015
  end-page: 630
  ident: CR58
  article-title: Assembling large genomes with single-molecule sequencing and locality-sensitive hashing
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.3238
– volume: 116
  start-page: 10418
  year: 2019
  end-page: 10423
  ident: CR7
  article-title: Considering adaptive genetic variation in climate change vulnerability assessment reduces species range loss projections
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1820663116
– volume: 23
  start-page: 205
  year: 2009
  end-page: 211
  ident: CR106
  article-title: A new generation of homology search tools based on probabilistic inference
  publication-title: Genome Inform.
– volume: 11
  start-page: 1035
  year: 2018
  end-page: 1052
  ident: CR38
  article-title: Guidelines for planning genomic assessment and monitoring of locally adaptive variation to inform species conservation
  publication-title: Evolut. Appl.
  doi: 10.1111/eva.12569
– volume: 268
  start-page: 78
  year: 1997
  end-page: 94
  ident: CR81
  article-title: Prediction of complete gene structures in human genomic DNA
  publication-title: J. Mol. Biol.
  doi: 10.1006/jmbi.1997.0951
– volume: 403
  start-page: 853
  year: 2000
  end-page: 858
  ident: CR10
  article-title: Biodiversity hotspots for conservation priorities
  publication-title: Nature
  doi: 10.1038/35002501
– volume: 22
  start-page: 1269
  year: 2006
  end-page: 1271
  ident: CR102
  article-title: CAFE: a computational tool for the study of gene family evolution
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btl097
– volume: 20
  start-page: 538
  year: 2022
  end-page: 553
  ident: CR14
  article-title: The chromosome-scale genomes of and (Dipterocarpaceae) provide insights into fragrant oleoresin biosynthesis and hardwood formation
  publication-title: Plant Biotechnol. J.
  doi: 10.1111/pbi.13735
– volume: 54
  start-page: 1959
  year: 2022
  end-page: 1971
  ident: CR94
  article-title: Genomic innovation and regulatory rewiring during evolution of the cotton genus
  publication-title: Nat. Genet.
  doi: 10.1038/s41588-022-01237-2
– volume: 9
  year: 2018
  ident: CR9
  article-title: Genomic effects of population collapse in a critically endangered ironwood tree
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-018-07913-4
– volume: 27
  start-page: 8409
  year: 2007
  end-page: 8418
  ident: CR28
  article-title: Requirement of Nse1, a subunit of the Smc5-Smc6 complex, for Rad52-dependent postreplication repair of UV-Damaged DNA in
  publication-title: Mol. Cell. Biol.
  doi: 10.1128/MCB.01543-07
– volume: 8
  start-page: 77
  year: 2010
  end-page: 80
  ident: CR99
  article-title: KaKs_Calculator 2.0: a toolkit incorporating gamma-series methods and sliding window strategies.
  publication-title: Bioinformatics
– volume: 111
  start-page: 10636
  year: 2014
  end-page: 10641
  ident: CR51
  article-title: Drastic population fluctuations explain the rapid extinction of the passenger pigeon
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1401526111
– volume: 7
  year: 2018
  ident: CR41
  article-title: An unexpected noncarpellate epigynous flower from the Jurassic of China
  publication-title: Elife
  doi: 10.7554/eLife.38827
– volume: 28
  start-page: 27
  year: 2000
  end-page: 30
  ident: CR92
  article-title: KEGG: Kyoto encyclopedia of genes and genomes
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/28.1.27
– volume: 20
  start-page: 1297
  year: 2010
  ident: 45836_CR110
  publication-title: Genome Res.
  doi: 10.1101/gr.107524.110
– ident: 45836_CR16
  doi: 10.1093/acprof:oso/9780199639656.001.0001
– volume: 5
  start-page: 974
  year: 2021
  ident: 45836_CR49
  publication-title: Nat. Ecol. Evol.
  doi: 10.1038/s41559-021-01469-1
– volume: 31
  start-page: 3812
  year: 2003
  ident: 45836_CR117
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkg509
– volume: 35
  start-page: 4453
  year: 2019
  ident: 45836_CR97
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btz305
– volume: 27
  start-page: 764
  year: 2011
  ident: 45836_CR56
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btr011
– volume: 9
  start-page: e112963
  year: 2014
  ident: 45836_CR60
  publication-title: PLoS One
  doi: 10.1371/journal.pone.0112963
– volume: 13
  start-page: 2178
  year: 2003
  ident: 45836_CR95
  publication-title: Genome Res.
  doi: 10.1101/gr.1224503
– volume: 4
  start-page: 4.10.11
  year: 2009
  ident: 45836_CR73
  publication-title: Curr. Protoc. Bioinforma.
– volume: 81
  start-page: 559
  year: 2007
  ident: 45836_CR118
  publication-title: Am. J. Hum. Genet.
  doi: 10.1086/519795
– volume: 31
  start-page: 1119
  year: 2013
  ident: 45836_CR66
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.2727
– volume: 31
  start-page: 3210
  year: 2015
  ident: 45836_CR68
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btv351
– volume: 25
  start-page: 2078
  year: 2009
  ident: 45836_CR109
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp352
– volume: 82
  start-page: 521
  year: 2004
  ident: 45836_CR42
  publication-title: Biol. J. Linn. Soc.
  doi: 10.1111/j.1095-8312.2004.00337.x
– volume: 14
  start-page: 2015
  year: 2021
  ident: 45836_CR34
  publication-title: Mol. Plant
  doi: 10.1016/j.molp.2021.08.001
– volume: 49
  start-page: 303
  year: 2017
  ident: 45836_CR36
  publication-title: Nat. Genet.
  doi: 10.1038/ng.3748
– volume: 17
  year: 2016
  ident: 45836_CR103
  publication-title: BMC Genomics
  doi: 10.1186/s12864-016-3197-x
– volume: 3
  start-page: 457
  year: 2019
  ident: 45836_CR114
  publication-title: Nat. Ecol. Evol.
  doi: 10.1038/s41559-019-0807-4
– volume: 470
  start-page: 479
  year: 2011
  ident: 45836_CR3
  publication-title: Nature
  doi: 10.1038/nature09670
– volume: 21
  start-page: i351
  year: 2005
  ident: 45836_CR72
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bti1018
– volume: 54
  start-page: 1959
  year: 2022
  ident: 45836_CR94
  publication-title: Nat. Genet.
  doi: 10.1038/s41588-022-01237-2
– volume: 403
  start-page: 853
  year: 2000
  ident: 45836_CR10
  publication-title: Nature
  doi: 10.1038/35002501
– volume: 108
  start-page: 4446
  year: 2003
  ident: 45836_CR20
  publication-title: J. Geophys. Res.
– volume: 35
  start-page: w265
  year: 2007
  ident: 45836_CR71
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkm286
– volume: 20
  start-page: 538
  year: 2022
  ident: 45836_CR14
  publication-title: Plant Biotechnol. J.
  doi: 10.1111/pbi.13735
– volume: 10
  start-page: 547
  year: 2000
  ident: 45836_CR86
  publication-title: Genome Res.
  doi: 10.1101/gr.10.4.547
– volume: 7
  year: 2018
  ident: 45836_CR41
  publication-title: Elife
  doi: 10.7554/eLife.38827
– volume: 6
  start-page: eaax8574
  year: 2020
  ident: 45836_CR55
  publication-title: Sci. Adv.
  doi: 10.1126/sciadv.aax8574
– volume: 110
  start-page: 1067
  year: 2012
  ident: 45836_CR57
  publication-title: Ann. Bot.
  doi: 10.1093/aob/mcs167
– volume: 18
  start-page: 170
  year: 2021
  ident: 45836_CR61
  publication-title: Nat. Methods
  doi: 10.1038/s41592-020-01056-5
– volume: 7
  year: 2006
  ident: 45836_CR80
  publication-title: BMC Bioinforma.
  doi: 10.1186/1471-2105-7-62
– volume: 449
  start-page: 463
  year: 2007
  ident: 45836_CR100
  publication-title: Nature
  doi: 10.1038/nature06148
– volume: 187
  start-page: 1096
  year: 2021
  ident: 45836_CR18
  publication-title: Plant Physiol.
  doi: 10.1093/plphys/kiab245
– volume: 111
  start-page: 10636
  year: 2014
  ident: 45836_CR51
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1401526111
– volume: 25
  start-page: 955
  year: 1997
  ident: 45836_CR75
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/25.5.955
– volume: 3
  start-page: 100464
  year: 2022
  ident: 45836_CR13
  publication-title: Plant Commun.
  doi: 10.1016/j.xplc.2022.100464
– volume: 50
  start-page: 1565
  year: 2018
  ident: 45836_CR65
  publication-title: Nat. Genet.
  doi: 10.1038/s41588-018-0237-2
– volume: 8
  start-page: 77
  year: 2010
  ident: 45836_CR99
  publication-title: Bioinformatics
– volume: 111
  start-page: 16790
  year: 2014
  ident: 45836_CR12
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1403053111
– volume: 28
  start-page: 27
  year: 2000
  ident: 45836_CR92
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/28.1.27
– volume: 28
  start-page: 531
  year: 2013
  ident: 45836_CR11
  publication-title: Trends Ecol. Evol.
  doi: 10.1016/j.tree.2013.04.005
– volume: 27
  start-page: 2156
  year: 2011
  ident: 45836_CR115
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btr330
– volume: 19
  year: 2018
  ident: 45836_CR62
  publication-title: BMC Bioinforma.
  doi: 10.1186/s12859-018-2485-7
– volume: 9
  year: 2008
  ident: 45836_CR87
  publication-title: Genome Biol.
  doi: 10.1186/gb-2008-9-1-r7
– volume: 375
  start-page: 455
  year: 2022
  ident: 45836_CR17
  publication-title: Science
  doi: 10.1126/science.abk2177
– volume: 345
  start-page: 1181
  year: 2014
  ident: 45836_CR93
  publication-title: Science
  doi: 10.1126/science.1255274
– volume: 25
  start-page: 1335
  year: 2009
  ident: 45836_CR76
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp157
– volume: 46
  start-page: 551
  year: 2015
  ident: 45836_CR4
  publication-title: Annu. Rev. Ecol. Evol. Syst.
  doi: 10.1146/annurev-ecolsys-112414-054314
– volume: 34
  start-page: i884
  year: 2018
  ident: 45836_CR108
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bty560
– volume: 10
  start-page: 563
  year: 2013
  ident: 45836_CR59
  publication-title: Nat. Methods
  doi: 10.1038/nmeth.2474
– volume: 92
  start-page: 75
  year: 1986
  ident: 45836_CR45
  publication-title: Botanical J. Linn. Soc.
  doi: 10.1111/j.1095-8339.1986.tb01824.x
– volume: 314
  start-page: 1041
  year: 2001
  ident: 45836_CR113
  publication-title: J. Mol. Biol.
  doi: 10.1006/jmbi.2000.5197
– volume: 10
  start-page: 511
  year: 2000
  ident: 45836_CR83
  publication-title: Genome Res.
  doi: 10.1101/gr.10.4.511
– volume: 110
  start-page: 462
  year: 2005
  ident: 45836_CR70
  publication-title: Cytogenetic Genome Res.
  doi: 10.1159/000084979
– volume: 2
  start-page: 121
  year: 1960
  ident: 45836_CR37
  publication-title: Acta Archaeological Sin.
– volume: 25
  start-page: 1754
  year: 2009
  ident: 45836_CR64
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp324
– volume: 268
  start-page: 78
  year: 1997
  ident: 45836_CR81
  publication-title: J. Mol. Biol.
  doi: 10.1006/jmbi.1997.0951
– volume: 40
  start-page: e49
  year: 2012
  ident: 45836_CR69
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkr1293
– volume: 116
  start-page: 10418
  year: 2019
  ident: 45836_CR7
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1820663116
– volume: 9
  year: 2018
  ident: 45836_CR9
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-018-07913-4
– volume: 32
  start-page: 1792
  year: 2004
  ident: 45836_CR96
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkh340
– volume: 33
  start-page: 623
  year: 2015
  ident: 45836_CR58
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.3238
– volume: 34
  start-page: 401
  year: 2000
  ident: 45836_CR53
  publication-title: Annu. Rev. Genet.
  doi: 10.1146/annurev.genet.34.1.401
– volume: 19
  start-page: 327
  year: 2009
  ident: 45836_CR120
  publication-title: Genome Res.
  doi: 10.1101/gr.073585.107
– volume: 107
  start-page: 15508
  year: 2010
  ident: 45836_CR21
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1005507107
– ident: 45836_CR30
  doi: 10.1080/00275514.2017.1414544
– volume: 85
  start-page: 141
  year: 2020
  ident: 45836_CR46
  publication-title: Cytologia
  doi: 10.1508/cytologia.85.141
– volume: 25
  start-page: 1105
  year: 2009
  ident: 45836_CR78
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp120
– volume: 106
  start-page: 11188
  year: 2009
  ident: 45836_CR23
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.0809865106
– volume: 22
  start-page: 356
  year: 2006
  ident: 45836_CR105
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bti797
– volume: 11
  year: 2020
  ident: 45836_CR50
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2020.599764
– volume: 396
  start-page: 59
  year: 2007
  ident: 45836_CR90
  publication-title: Methods Mol. Biol.
  doi: 10.1007/978-1-59745-515-2_5
– volume: 31
  start-page: 5654
  year: 2003
  ident: 45836_CR77
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkg770
– volume: 11
  start-page: 247
  year: 2014
  ident: 45836_CR19
  publication-title: Biogeosciences
  doi: 10.5194/bg-11-247-2014
– volume: 41
  start-page: 1939
  year: 2020
  ident: 45836_CR107
  publication-title: Chin. J. Tropical Crops
– volume: 12
  year: 2011
  ident: 45836_CR101
  publication-title: BMC Bioinforma.
  doi: 10.1186/1471-2105-12-102
– volume: 10
  start-page: 1719
  year: 2020
  ident: 45836_CR31
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2019.01719
– volume: 11
  start-page: 1035
  year: 2018
  ident: 45836_CR38
  publication-title: Evolut. Appl.
  doi: 10.1111/eva.12569
– volume: 27
  start-page: 573
  year: 1999
  ident: 45836_CR74
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/27.2.573
– volume: 5
  start-page: 461
  year: 2019
  ident: 45836_CR40
  publication-title: Nat. Plants
  doi: 10.1038/s41477-019-0421-0
– volume: 42
  start-page: d222
  year: 2014
  ident: 45836_CR91
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkt1223
– volume: 21
  start-page: 277
  year: 2001
  ident: 45836_CR112
  publication-title: Guihaia
– volume: 475
  start-page: 493
  year: 2011
  ident: 45836_CR35
  publication-title: Nature
  doi: 10.1038/nature10231
– volume: 23
  start-page: 205
  year: 2009
  ident: 45836_CR106
  publication-title: Genome Inform.
– volume: 38
  start-page: e164
  year: 2010
  ident: 45836_CR111
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkq603
– volume: 239
  start-page: 510
  year: 2006
  ident: 45836_CR22
  publication-title: Palaeogeogr. Palaeoclimatol. Palaeoecol.
  doi: 10.1016/j.palaeo.2006.01.017
– volume: 112
  start-page: e6624
  year: 2015
  ident: 45836_CR27
  publication-title: Proc. Natl Acad. Sci.
  doi: 10.1073/pnas.1508543112
– volume: 4
  start-page: 1166
  year: 2021
  ident: 45836_CR15
  publication-title: Commun. Biol.
  doi: 10.1038/s42003-021-02682-1
– volume: 66
  start-page: 487
  year: 2015
  ident: 45836_CR33
  publication-title: Annu. Rev. Plant Biol.
  doi: 10.1146/annurev-arplant-050213-040012
– volume: 39
  start-page: w29
  year: 2011
  ident: 45836_CR89
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gkr367
– volume: 3
  start-page: 628
  year: 2019
  ident: 45836_CR6
  publication-title: Nat. Ecol. Evol.
  doi: 10.1038/s41559-019-0824-3
– volume: 22
  start-page: 1269
  year: 2006
  ident: 45836_CR102
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btl097
– volume: 7
  start-page: e46688
  year: 2012
  ident: 45836_CR116
  publication-title: PloS ONE
  doi: 10.1371/journal.pone.0046688
– volume: 54
  start-page: 73
  year: 2022
  ident: 45836_CR52
  publication-title: Nat. Genet.
  doi: 10.1038/s41588-021-00971-3
– volume: 24
  start-page: 1586
  year: 2007
  ident: 45836_CR98
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msm088
– volume: 344
  start-page: 1246752
  year: 2014
  ident: 45836_CR2
  publication-title: Science
  doi: 10.1126/science.1246752
– volume: 95
  start-page: 5857
  year: 1998
  ident: 45836_CR104
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.95.11.5857
– volume: 5
  year: 2004
  ident: 45836_CR84
  publication-title: BMC Bioinforma.
  doi: 10.1186/1471-2105-5-59
– volume: 88
  start-page: 745
  year: 2006
  ident: 45836_CR85
  publication-title: Genomics
  doi: 10.1016/j.ygeno.2006.05.008
– volume: 23
  start-page: 1061
  year: 2007
  ident: 45836_CR67
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btm071
– volume: 88
  start-page: 76
  year: 2011
  ident: 45836_CR121
  publication-title: Am. J. Hum. Genet.
  doi: 10.1016/j.ajhg.2010.11.011
– volume: 43
  start-page: 913
  year: 2011
  ident: 45836_CR48
  publication-title: Nat. Genet.
  doi: 10.1038/ng.889
– volume: 9
  start-page: 1843
  year: 2000
  ident: 45836_CR54
  publication-title: Mol. Ecol.
  doi: 10.1046/j.1365-294x.2000.01081.x
– volume: 9
  start-page: 437
  year: 2016
  ident: 45836_CR44
  publication-title: Plant Ecol. Diversity
  doi: 10.1080/17550874.2016.1267274
– volume: 97
  start-page: 1296
  year: 2010
  ident: 45836_CR25
  publication-title: Am. J. Bot.
  doi: 10.3732/ajb.0900346
– volume: 33
  start-page: w116
  year: 2005
  ident: 45836_CR88
  publication-title: Nucleic Acids Res.
  doi: 10.1093/nar/gki442
– volume: 355
  start-page: 959
  year: 2017
  ident: 45836_CR8
  publication-title: Science
  doi: 10.1126/science.aag2773
– volume: 251
  year: 2020
  ident: 45836_CR39
  publication-title: Biol. Conserv.
  doi: 10.1016/j.biocon.2020.108791
– volume: 5
  start-page: eaax0121
  year: 2019
  ident: 45836_CR1
  publication-title: Sci. Adv.
  doi: 10.1126/sciadv.aax0121
– volume: 60
  start-page: 1158
  year: 2021
  ident: 45836_CR5
  publication-title: J. Syst. Evol.
  doi: 10.1111/jse.12728
– volume: 27
  start-page: 8409
  year: 2007
  ident: 45836_CR28
  publication-title: Mol. Cell. Biol.
  doi: 10.1128/MCB.01543-07
– volume: 186
  start-page: 5
  year: 2010
  ident: 45836_CR47
  publication-title: N. Phytologist
  doi: 10.1111/j.1469-8137.2009.03142.x
– volume: 222
  start-page: 103
  year: 2018
  ident: 45836_CR29
  publication-title: J. Plant Physiol.
  doi: 10.1016/j.jplph.2018.01.009
– volume: 15
  start-page: 367
  year: 2012
  ident: 45836_CR32
  publication-title: Curr. Opin. Plant Biol.
  doi: 10.1016/j.pbi.2012.05.004
– volume: 23
  start-page: 323
  year: 2006
  ident: 45836_CR26
  publication-title: Rev. Mexicana de. Cienc. Geol.ógicas
– ident: 45836_CR24
– volume: 28
  start-page: 511
  year: 2010
  ident: 45836_CR79
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.1621
– volume: 19
  start-page: 1655
  year: 2009
  ident: 45836_CR119
  publication-title: Genome Res.
  doi: 10.1101/gr.094052.109
– volume: 58
  start-page: 268
  year: 2012
  ident: 45836_CR63
  publication-title: Methods
  doi: 10.1016/j.ymeth.2012.05.001
– volume: 33
  start-page: 11
  year: 2021
  ident: 45836_CR43
  publication-title: Plant Cell
  doi: 10.1093/plcell/koaa015
– volume: 20
  start-page: 2878
  year: 2004
  ident: 45836_CR82
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bth315
SSID ssj0000391844
Score 2.4776983
Snippet Dipterocarpoideae species form the emergent layer of Asian rainforests. They are the indicator species for Asian rainforest distribution, but they are severely...
Abstract Dipterocarpoideae species form the emergent layer of Asian rainforests. They are the indicator species for Asian rainforest distribution, but they are...
SourceID doaj
proquest
pubmed
crossref
springer
SourceType Open Website
Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 1683
SubjectTerms 38/23
45
49/31
631/158/672
631/181/2474
631/181/457/649/2157
Adaptation
Anthropogenic factors
Autotetraploid
Demography
Endangered & extinct species
Endangered plants
Endangered species
Genomes
Geographical distribution
Glacial periods
Human influences
Humanities and Social Sciences
Indicator species
multidisciplinary
Population decline
Population number
Rainforests
Science
Science (multidisciplinary)
Threatened species
SummonAdditionalLinks – databaseName: Health & Medical Collection
  dbid: 7X7
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1Lb9QwELagCIkL4tkGCjISN4iah2M7J1QeVcWBE0V7syYeB1WiyXazPfDvmXG8qRC018SOnPGM5xuP_Y0QbyuPwRamy7XumpxLXOWEkyFHbzx0BrCaD8h-06dn6uuqWaUNtykdq9ytiXGhxtHzHvkRuSXyhVqb8sP6MueqUZxdTSU07op7TF3GR7rMyix7LMx-bpVKd2WK2h5NKq4M5JhyThjqvPnLH0Xa_v9hzX_ypNH9nDwSDxNulMfzRD8Wd8LwRNyfK0n-fip-fCbbD-SMYLMezxGCZPLVi3M_SeZoop4xIyAxXCSOagkDSkBYz7n4SW5Hecw3KiUXjSAoSwObnomzky_fP53mqWRC7pVtthQI6hKhrBvTqxYU1n3ZlQV6NDW02hgSfuELoz0AxXEBWwIY0PZKAzVqKbB-LvaGcQgHQvYQKgp3ytAAqFCFTtW-M4RgUKFGDZkod4JzPvGJc1mLXy7mtWvrZmE7EraLwnZNJt4tfdYzm8atrT_yfCwtmQk7Phg3P10yLEcIrbdVawuGfqRdlhAUGPp137QtWszE4W42XTLPyV0rUybeLK_JsDhbAkMYr2Kbiu-Z6zoT-7MWLCOhsJ4JnW0m3u_U4vrjN__Qi9vH8lI8qFgz-cJ8fSj2tpur8Iogz7Z7HfX6D20H_Jk
  priority: 102
  providerName: ProQuest
– databaseName: Scholars Portal Journals: Open Access
  dbid: M48
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV1Lb9QwEB6VVkhcEG15BFrkStwgkIfjxwFVhbaqKtETi3qzJraDKrXJstlK9N8zdpJFFQsnrsk4sufh-UaTmQF4U1jnVSbrVIi6SsOIq5RwMqbOSou1RFcMP8heiLMZP7-sLjdgGnc0MrBfG9qFeVKzxfX7nz_uDsngPw4l4-pDz6O5k7dJQxZQpNUD2CLPJIOhfhnhfryZS00BDR9rZ9YvveefYhv_ddjzj7xpdEenT-DxiCPZ0SD4bdjw7Q48HCZL3u3Ct2O6Czw5J1zMuyuHnoVmrDdXtmehZxOtjBkC5vzN2LOaYesYOpwPufmeLTt2FCosWRgiQdCWNtY_hdnpydfPZ-k4QiG1XFVLCgxF7jAvK9lwjdyVTV7nmbNOlqiFlCSMzGZSWESK67zTBDhQN1wgEWkKtJ_BZtu1_gWwBn1B4U_uK0TuC1_z0taSEI3jTjiBCeQT44wd-4uHMRfXJua5S2UGZhtitonMNlUCb1dr5kN3jX9SfwryWFGGztjxQbf4bkZDM4TYGlVolQUoSNqmCFGhpKPbSmunXAJ7kzTNpG2GMA8BLSFknsDB6jUZWsieYOu720hThLpzUSbwfNCC1U4ozA8NnlUC7ya1-P3xvx_o5f840Ct4VAT9DWX25R5sLhe3fp-A0rJ-HbX_Fyo7DHM
  priority: 102
  providerName: Scholars Portal
– databaseName: Springer Nature OA Free Journals
  dbid: C6C
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV3Nb9UwDLfGJiQuE4yPFQYKEjeo6EeapMftwTRx2GlDu0VukqJJrH16fTvsv8dOPxBiTOLaOlXq2M3PdfwzwIfC-WAy3aRKNVXKLa5SwsmYeqcdNhp9MR6QPVdnl_LbVXW1A8VcCxMP7UdKy_iZnk-HfR5kdGnaUVLO9Km0egR7TN3OVr1Sq-W_CjOeGymn-pisNPcM_WMPilT99-HLv3Kjccs5fQr7E1YUx-PsnsFO6A7g8dg98u45fP9C_h5oA8LNur_2GAQTrt5cu0EwLxONjFkA4cPNxEstsPMCPa7H_Psgtr045ipKwY0iCL7SxIYXcHn69WJ1lk5tElInTbWl4E_lHvOy0q2sUfqyzZs8887rEmulNSk8c5lWDpFit-BrAhVYt1IhCdUUTL-E3a7vwiGIFkNBIU4eKkQZitDI0jWaUIuXXnmFCeSz4qybOMS5lcVPG3PZpbGjsi0p20Zl2yqBj8uY9cig8aD0Ca_HIsns1_FCv_lhJ2uwhMpaU9QmY7hHFmUINaGmV3dVXXvjEziaV9NOLjlYwjUEppTSeQLvl9vkTJwhwS70t1Gm4NpyVSbwarSCZSYUyjOJs0ng02wWvx_-7xd6_X_ib-BJwZbKRfPlEexuN7fhLcGebfMu2vkvFKX6eQ
  priority: 102
  providerName: Springer Nature
Title Dipterocarpoidae genomics reveal their demography and adaptations to Asian rainforests
URI https://link.springer.com/article/10.1038/s41467-024-45836-5
https://www.ncbi.nlm.nih.gov/pubmed/38395938
https://www.proquest.com/docview/2931026671
https://www.proquest.com/docview/2932015663
https://doaj.org/article/612f829805514ab78635a7a4dc599d8d
Volume 15
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV1Lb9QwEB5BERIXxJuUsjISN4iaxI4fx-3SpVqJCgFFe7MmtiNVotlVsz3w7zt2sksRrwuXRHLsyB6PPd9o7G8AXlfOB12oJpeyqfOY4ionnIy5d8pho9BXwwHZU3lyJhbLenkj1Vc8EzbQAw-COyQL3OrK6CKadmqtyUKiQuFdbYzXPu6-ZPNuOFNpD-aGXBcx3pIpuD7sRdoTyCTlMVQo8_onS5QI-3-HMn-JkCbDM38A90fEyKZDTx_CrdA9grtDDsnvj-HrO1r1gcwQXq5X5x4Di7SrF-euZ5GdiVqmWADz4WJkp2bYeYYe10MUvmebFZvGu5QsposgEEsd65_A2fz4y-wkH5Ml5E7oekMuoCw9lrxWrTAkHt6WTVl45xVHI5UisReuUNIhkgcXvCFogaYVEqmSIZf6Kex1qy48B9ZiqMjRKUONKEIVGsFdowi7eOGll5hBuRWcdSOTeExo8c2miDbXdhC2JWHbJGxbZ_Bm12Y98Gj8tfZRnI9dzciBnQpIM-yoGfZfmpHBwXY27bgwe0vohiCVlKrM4NXuMy2pGCfBLqyuUp0q3jCXPINngxbsekIOfaRy1hm83arFj5__eUD7_2NAL-BeFfU3XqjnB7C3ubwKLwkSbZoJ3FZLRU89fz-BO9Pp4vOC3kfHpx8_UelMziZpfdDzg9DXqnsK9Q
linkProvider Directory of Open Access Journals
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV3Nb9UwDLfGEIIL4nMUBgQJTlCtbdIkPSA0GNMbGztt6N2Cm6RoEmsfr29C-6f4G3H6NSFgt13bJEocx_45jm2Al5l1XieqjKUs8ziUuIoJJ2PsrLJYKnRZ_0D2UM6Oxad5Pl-DX2MsTHhWOcrETlC7xoY78i1SS6QLpVTpu8WPOFSNCt7VsYRGzxb7_vwnmWzt270d2t9XWbb78ejDLB6qCsRW6HxFtpJMHaY8V5UoUDhepWWaOOsUx0IqRfNLLFn3FpFMHe8K0sFYVEIiNSrI9qRxr8F1UrxJOFFqrqY7nZBtXQsxxOYkXG-1opNEpAjj4KCUcf6H_uvKBPwL2_7ll-3U3e4duD3gVLbdM9ZdWPP1PbjRV648vw9fdkjWeFJ-uFw0Jw49C8leT09sy0JOKOrZeSCY86dDTmyGtWPocNH7_lu2ath2iOBkoUgFQWeaWPsAjq-EmA9hvW5q_whYhT4j8yr1OaLwmS8Ft6UixOSEk05iBOlIOGOH_OWhjMZ30_nRuTY9sQ0R23TENnkEr6c-iz57x6Wt34f9mFqGzNvdh2b5zQwH2RAirHRW6CRATeJmTYgNFS3d5kXhtItgc9xNM4iD1lwwbwQvpt90kIN3BmvfnHVtshDXLnkEGz0XTDPhBGPzgusI3oxscTH4_xf0-PK5PIebs6PPB-Zg73D_CdzKApeGYH2-Ceur5Zl_SnBrVT7reJzB16s-VL8Bnzs5_Q
linkToPdf http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Lb9QwEB6VIhAXxLOkFDASnCDaJHbs5IBQYVm1FFUcKNqbmdgOqkST7WYr1L_Gr2PsJFshoLdeE8eyx_P4JuOZAXiRGeuKRFWxlFUe-xZXMeFkjK1RBiuFNusvyB7KvSPxcZ7PN-DXmAvjr1WOOjEoatsa_498QmaJbKGUKp3Uw7WIz9PZ28Vp7DtI-Ujr2E6jZ5EDd_6T3Lfuzf6Uzvplls0-fHm_Fw8dBmIjinxFfpNMLaY8V7UoUVhep1WaWGMVx1IqRWtNDHn6BpHcHmdLssdY1kIiDSrJD6V5r8F1xfPUy5iaq_X_HV95vRBiyNNJeDHpRNBKZBRjH6yUcf6HLQwtA_6Fc_-K0QbTN7sDtwfMynZ7JrsLG665Bzf6Lpbn9-HrlPSOI0OIy0V7bNExX_j15Nh0zNeHoi9DNIJZdzLUx2bYWIYWF_09gI6tWrbrszmZb1hBMJoW1j2Aoysh5kPYbNrGPQJWo8vI1Updjihc5irBTaUIPVlhpZUYQToSTpuhlrlvqfFDh5g6L3RPbE3E1oHYOo_g1fqbRV_J49LR7_x5rEf6KtzhQbv8rgeh1oQO6yIri8TDTuLsgtAbKtq6ycvSFjaCnfE09aAaOn3ByBE8X78mofaRGmxcexbGZD7HXfIItnouWK-EE6TNS15E8Hpki4vJ_7-h7cvX8gxukjjpT_uHB4_hVuaZ1Oft8x3YXC3P3BNCXqvqaWBxBt-uWqZ-A1HQPjM
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Dipterocarpoidae+genomics+reveal+their+demography+and+adaptations+to+Asian+rainforests&rft.jtitle=Nature+communications&rft.au=Rong+Wang&rft.au=Chao-Nan+Liu&rft.au=Simon+T.+Segar&rft.au=Yu-Ting+Jiang&rft.date=2024-02-23&rft.pub=Nature+Portfolio&rft.eissn=2041-1723&rft.volume=15&rft.issue=1&rft.spage=1&rft.epage=16&rft_id=info:doi/10.1038%2Fs41467-024-45836-5&rft.externalDBID=DOA&rft.externalDocID=oai_doaj_org_article_612f829805514ab78635a7a4dc599d8d
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=2041-1723&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=2041-1723&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=2041-1723&client=summon