Changes in the Bacterioplankton Community Structure from Southern Gulf of Mexico During a Simulated Crude Oil Spill at Mesocosm Scale
The southern Gulf of Mexico (sGoM) is highly susceptible to receiving environmental impacts due to the recent increase in oil-related activities. In this study, we assessed the changes in the bacterioplankton community structure caused by a simulated oil spill at mesocosms scale. The 16S rRNA gene s...
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Published in | Microorganisms (Basel) Vol. 7; no. 10; p. 441 |
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Main Authors | , , , , , , , , |
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Language | English |
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Abstract | The southern Gulf of Mexico (sGoM) is highly susceptible to receiving environmental impacts due to the recent increase in oil-related activities. In this study, we assessed the changes in the bacterioplankton community structure caused by a simulated oil spill at mesocosms scale. The 16S rRNA gene sequencing analysis indicated that the initial bacterial community was mainly represented by Gamma-proteobacteria, Alpha-proteobacteria, Flavobacteriia, and Cyanobacteria. The hydrocarbon degradation activity, measured as the number of culturable hydrocarbonoclastic bacteria (CHB) and by the copy number of the alkB gene, was relatively low at the beginning of the experiment. However, after four days, the hydrocarbonoclastic activity reached its maximum values and was accompanied by increases in the relative abundance of the well-known hydrocarbonoclastic Alteromonas. At the end of the experiment, the diversity was restored to similar values as those observed in the initial time, although the community structure and composition were clearly different, where Marivita, Pseudohongiella, and Oleibacter were detected to have differential abundances on days eight–14. These changes were related with total nitrogen (p value = 0.030 and r2 = 0.22) and polycyclic aromatic hydrocarbons (p value = 0.048 and r2 = 0.25), according to PERMANOVA. The results of this study contribute to the understanding of the potential response of the bacterioplankton from sGoM to crude oil spills. |
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AbstractList | The southern Gulf of Mexico (sGoM) is highly susceptible to receiving environmental impacts due to the recent increase in oil-related activities. In this study, we assessed the changes in the bacterioplankton community structure caused by a simulated oil spill at mesocosms scale. The 16S rRNA gene sequencing analysis indicated that the initial bacterial community was mainly represented by Gamma-proteobacteria, Alpha-proteobacteria, Flavobacteriia, and Cyanobacteria. The hydrocarbon degradation activity, measured as the number of culturable hydrocarbonoclastic bacteria (CHB) and by the copy number of the alkB gene, was relatively low at the beginning of the experiment. However, after four days, the hydrocarbonoclastic activity reached its maximum values and was accompanied by increases in the relative abundance of the well-known hydrocarbonoclastic Alteromonas. At the end of the experiment, the diversity was restored to similar values as those observed in the initial time, although the community structure and composition were clearly different, where Marivita, Pseudohongiella, and Oleibacter were detected to have differential abundances on days eight–14. These changes were related with total nitrogen (p value = 0.030 and r2 = 0.22) and polycyclic aromatic hydrocarbons (p value = 0.048 and r2 = 0.25), according to PERMANOVA. The results of this study contribute to the understanding of the potential response of the bacterioplankton from sGoM to crude oil spills. The southern Gulf of Mexico (sGoM) is highly susceptible to receiving environmental impacts due to the recent increase in oil-related activities. In this study, we assessed the changes in the bacterioplankton community structure caused by a simulated oil spill at mesocosms scale. The 16S rRNA gene sequencing analysis indicated that the initial bacterial community was mainly represented by Gamma-proteobacteria, Alpha-proteobacteria, Flavobacteriia, and Cyanobacteria. The hydrocarbon degradation activity, measured as the number of culturable hydrocarbonoclastic bacteria (CHB) and by the copy number of the alkB gene, was relatively low at the beginning of the experiment. However, after four days, the hydrocarbonoclastic activity reached its maximum values and was accompanied by increases in the relative abundance of the well-known hydrocarbonoclastic Alteromonas . At the end of the experiment, the diversity was restored to similar values as those observed in the initial time, although the community structure and composition were clearly different, where Marivita , Pseudohongiella , and Oleibacter were detected to have differential abundances on days eight–14. These changes were related with total nitrogen ( p value = 0.030 and r 2 = 0.22) and polycyclic aromatic hydrocarbons ( p value = 0.048 and r 2 = 0.25), according to PERMANOVA. The results of this study contribute to the understanding of the potential response of the bacterioplankton from sGoM to crude oil spills. The southern Gulf of Mexico (sGoM) is highly susceptible to receiving environmental impacts due to the recent increase in oil-related activities. In this study, we assessed the changes in the bacterioplankton community structure caused by a simulated oil spill at mesocosms scale. The 16S rRNA gene sequencing analysis indicated that the initial bacterial community was mainly represented by Gamma-proteobacteria, Alpha-proteobacteria, Flavobacteriia, and Cyanobacteria. The hydrocarbon degradation activity, measured as the number of culturable hydrocarbonoclastic bacteria (CHB) and by the copy number of the alkB gene, was relatively low at the beginning of the experiment. However, after four days, the hydrocarbonoclastic activity reached its maximum values and was accompanied by increases in the relative abundance of the well-known hydrocarbonoclastic Alteromonas. At the end of the experiment, the diversity was restored to similar values as those observed in the initial time, although the community structure and composition were clearly different, where Marivita, Pseudohongiella, and Oleibacter were detected to have differential abundances on days eight−14. These changes were related with total nitrogen (p value = 0.030 and r2 = 0.22) and polycyclic aromatic hydrocarbons (p value = 0.048 and r2 = 0.25), according to PERMANOVA. The results of this study contribute to the understanding of the potential response of the bacterioplankton from sGoM to crude oil spills. |
Author | García-Maldonado, José Q. Uribe-Flores, María Magdalena Putzeys, Sébastien Cerqueda-García, Daniel García-Cruz, Norberto Ulises Pech, Daniel Herrera-Silveira, Jorge Valencia-Agami, Sonia S. Aguirre-Macedo, M. Leopoldina |
AuthorAffiliation | 2 Consorcio de Investigación del Golfo de México (CIGoM)—Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Mérida, Yucatán 97310, Mexico; dacegabiol@ciencias.unam.mx (D.C.-G.); sebastien.putzeys@cinvestav.mx (S.P.); norbertoulisesg@gmail.com (N.U.G.-C.) 1 Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Mérida, Yucatán 97310, Mexico; sonia.valencia@cinvestav.mx (S.S.V.-A.); maria.uribe@cinvestav.mx (M.M.U.-F.); jorge.herrera@cinvestav.mx (J.H.-S.) 3 Laboratorio de Biodiversidad Marina y Cambio Climático, El Colegio de la Frontera Sur, Lerma Campeche, Campeche 24500, Mexico; dpech@ecosur.mx 4 CONACYT – Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Mérida, Yucatán 97310, Mexico |
AuthorAffiliation_xml | – name: 1 Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Mérida, Yucatán 97310, Mexico; sonia.valencia@cinvestav.mx (S.S.V.-A.); maria.uribe@cinvestav.mx (M.M.U.-F.); jorge.herrera@cinvestav.mx (J.H.-S.) – name: 2 Consorcio de Investigación del Golfo de México (CIGoM)—Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Mérida, Yucatán 97310, Mexico; dacegabiol@ciencias.unam.mx (D.C.-G.); sebastien.putzeys@cinvestav.mx (S.P.); norbertoulisesg@gmail.com (N.U.G.-C.) – name: 3 Laboratorio de Biodiversidad Marina y Cambio Climático, El Colegio de la Frontera Sur, Lerma Campeche, Campeche 24500, Mexico; dpech@ecosur.mx – name: 4 CONACYT – Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Mérida, Yucatán 97310, Mexico |
Author_xml | – sequence: 1 givenname: Sonia S. surname: Valencia-Agami fullname: Valencia-Agami, Sonia S. – sequence: 2 givenname: Daniel orcidid: 0000-0003-1544-5662 surname: Cerqueda-García fullname: Cerqueda-García, Daniel – sequence: 3 givenname: Sébastien orcidid: 0000-0003-2947-2629 surname: Putzeys fullname: Putzeys, Sébastien – sequence: 4 givenname: María Magdalena surname: Uribe-Flores fullname: Uribe-Flores, María Magdalena – sequence: 5 givenname: Norberto Ulises orcidid: 0000-0002-8342-8103 surname: García-Cruz fullname: García-Cruz, Norberto Ulises – sequence: 6 givenname: Daniel surname: Pech fullname: Pech, Daniel – sequence: 7 givenname: Jorge surname: Herrera-Silveira fullname: Herrera-Silveira, Jorge – sequence: 8 givenname: M. Leopoldina orcidid: 0000-0002-3910-8305 surname: Aguirre-Macedo fullname: Aguirre-Macedo, M. Leopoldina – sequence: 9 givenname: José Q. surname: García-Maldonado fullname: García-Maldonado, José Q. |
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SubjectTerms | 16s rrna Abundance AlkB gene Bacterioplankton Biodegradation Carbon Chromatography Community structure Copy number Crude oil Cyanobacteria Environmental impact Experiments Gene sequencing Hydrocarbon-degrading bacteria Hydrocarbons light crude oil mesocosm experiment Mesocosms Microorganisms Molecular weight Nutrients Oil spills Polycyclic aromatic hydrocarbons Relative abundance rRNA 16S Salinity Seawater Sequence analysis southern gulf of mexico |
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Title | Changes in the Bacterioplankton Community Structure from Southern Gulf of Mexico During a Simulated Crude Oil Spill at Mesocosm Scale |
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