Teleost skin microbiome: An intimate interplay between the environment and the host immunity

The mucosal microbiome plays a role in regulating host health. The research conducted in humans and mice has governed and detailed the information on microbiome-host immunity interactions. Teleost fish, different from humans and mice, lives in and relies on the aquatic environment and is subjected t...

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Published inFish & Shellfish Immunology Vol. 139; p. 108869
Main Authors Wang, Liang-Chun, Chen, Li-Hsuan, Chiu, Yu-Che, Liou, Chung-Yi, Chen, Han-Chung, Lu, Chia-Yun, Chen, Jian-Lin
Format Journal Article
LanguageEnglish
Published England Elsevier Ltd 01.08.2023
Elsevier BV
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Abstract The mucosal microbiome plays a role in regulating host health. The research conducted in humans and mice has governed and detailed the information on microbiome-host immunity interactions. Teleost fish, different from humans and mice, lives in and relies on the aquatic environment and is subjected to environmental variation. The growth of teleost mucosal microbiome studies, the majority in the gastrointestinal tract, has emphasized the essential role of the teleost microbiome in growth and health. However, research in the teleost external surface microbiome, as the skin microbiome, has just started. In this review, we examine the general findings in the colonization of the skin microbiome, how the skin microbiome is subjected to environmental change and the reciprocal regulation with the host immune system, and the current challenges that potential study models can address. The information collected from teleost skin microbiome-host immunity research would help future teleost culturing from the potential parasitic infestation and bacterial infection as foreseeing growing threats.
AbstractList The mucosal microbiome plays a role in regulating host health. The research conducted in humans and mice has governed and detailed the information on microbiome-host immunity interactions. Teleost fish, different from humans and mice, lives in and relies on the aquatic environment and is subjected to environmental variation. The growth of teleost mucosal microbiome studies, the majority in the gastrointestinal tract, has emphasized the essential role of the teleost microbiome in growth and health. However, research in the teleost external surface microbiome, as the skin microbiome, has just started. In this review, we examine the general findings in the colonization of the skin microbiome, how the skin microbiome is subjected to environmental change and the reciprocal regulation with the host immune system, and the current challenges that potential study models can address. The information collected from teleost skin microbiome-host immunity research would help future teleost culturing from the potential parasitic infestation and bacterial infection as foreseeing growing threats.
The mucosal microbiome plays a role in regulating host health. The research conducted in humans and mice has governed and detailed the information on microbiome-host immunity interactions. Teleost fish, different from humans and mice, lives in and relies on the aquatic environment and is subjected to environmental variation. The growth of teleost mucosal microbiome studies, the majority in the gastrointestinal tract, has emphasized the essential role of the teleost microbiome in growth and health. However, research in the teleost external surface microbiome, as the skin microbiome, has just started. In this review, we examine the general findings in the colonization of the skin microbiome, how the skin microbiome is subjected to environmental change and the reciprocal regulation with the host immune system, and the current challenges that potential study models can address. The information collected from teleost skin microbiome-host immunity research would help future teleost culturing from the potential parasitic infestation and bacterial infection as foreseeing growing threats.The mucosal microbiome plays a role in regulating host health. The research conducted in humans and mice has governed and detailed the information on microbiome-host immunity interactions. Teleost fish, different from humans and mice, lives in and relies on the aquatic environment and is subjected to environmental variation. The growth of teleost mucosal microbiome studies, the majority in the gastrointestinal tract, has emphasized the essential role of the teleost microbiome in growth and health. However, research in the teleost external surface microbiome, as the skin microbiome, has just started. In this review, we examine the general findings in the colonization of the skin microbiome, how the skin microbiome is subjected to environmental change and the reciprocal regulation with the host immune system, and the current challenges that potential study models can address. The information collected from teleost skin microbiome-host immunity research would help future teleost culturing from the potential parasitic infestation and bacterial infection as foreseeing growing threats.
ArticleNumber 108869
Author Wang, Liang-Chun
Liou, Chung-Yi
Chen, Li-Hsuan
Chiu, Yu-Che
Chen, Han-Chung
Lu, Chia-Yun
Chen, Jian-Lin
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  orcidid: 0000-0002-4977-4256
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  fullname: Wang, Liang-Chun
  email: marknjoy@g-mail.nsysu.edu.tw
  organization: Marine and Pathogenic Microbiology Laboratory, Department of Marine Biotechnology and Resources, College of Marine Science, National Sun Yat-sen University, Kaohsiung City, Taiwan
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  givenname: Chia-Yun
  surname: Lu
  fullname: Lu, Chia-Yun
  organization: Marine and Pathogenic Microbiology Laboratory, Department of Marine Biotechnology and Resources, College of Marine Science, National Sun Yat-sen University, Kaohsiung City, Taiwan
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  givenname: Jian-Lin
  surname: Chen
  fullname: Chen, Jian-Lin
  organization: Marine and Pathogenic Microbiology Laboratory, Department of Marine Biotechnology and Resources, College of Marine Science, National Sun Yat-sen University, Kaohsiung City, Taiwan
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Cites_doi 10.1006/fsim.1996.0011
10.1016/j.cbd.2009.02.001
10.1016/j.chom.2021.12.008
10.1128/AEM.00789-20
10.3389/fimmu.2021.654758
10.4194/1303-2712-v21_5_03
10.1016/j.resmic.2006.10.005
10.1038/nrmicro1978
10.2147/IDR.S129055
10.1016/j.cbpc.2015.10.004
10.1073/pnas.0400706101
10.1016/j.cell.2022.08.003
10.1016/j.cell.2006.08.043
10.1111/j.1600-0625.2009.01059.x
10.1016/j.fsi.2018.02.006
10.1038/s41598-021-98583-8
10.1038/srep32032
10.1007/s002489900158
10.3389/fmicb.2017.02043
10.1073/pnas.1702511114
10.7717/peerj.8705
10.1152/physrev.1997.77.3.591
10.1371/journal.pone.0084772
10.1128/mSphere.00401-20
10.1126/science.1223490
10.4236/aim.2014.47040
10.1111/anu.13096
10.1177/0023677216678825
10.1006/fsim.1998.0192
10.1007/s00248-021-01795-8
10.1016/j.ecoenv.2021.112310
10.1053/j.gastro.2011.03.042
10.1016/j.dci.2012.11.009
10.4161/19490976.2014.972228
10.1016/j.fsi.2022.02.011
10.1111/j.0906-6713.2004.003556.x
10.1242/jeb.095430
10.3389/fimmu.2018.02972
10.1016/j.cbpc.2020.108840
10.1016/j.fsi.2013.09.032
10.1039/C5MB00890E
10.1186/s42523-020-00046-4
10.1038/mi.2010.12
10.1007/s00284-021-02440-w
10.1111/fwb.13437
10.1016/j.aquaculture.2019.734898
10.1038/ismej.2017.28
10.3389/fimmu.2021.633621
10.1111/mec.13177
10.3389/fmicb.2014.00207
10.1111/1574-6941.12136
10.1038/s41598-021-87167-1
10.3390/ijms22157804
10.3389/fmicb.2017.02664
10.1016/j.aquatox.2014.05.019
10.1111/j.1574-695X.2007.00343.x
10.1186/s40168-020-0789-0
10.1111/j.1462-2920.2008.01794.x
10.1186/s40168-020-00875-0
10.1016/j.aqrep.2022.101204
10.1016/j.vaccine.2010.06.040
10.1007/s00248-006-9037-9
10.1016/0959-8030(91)90019-G
10.1038/srep19707
10.1016/j.vetmic.2013.12.012
10.1016/j.aquaculture.2008.03.020
10.1016/j.tim.2007.12.008
10.1111/jam.15071
10.1038/s41598-019-55314-4
10.1038/srep41753
10.1111/1758-2229.12774
10.1080/08997659.2013.781553
10.1126/science.1261359
10.1186/s40168-021-01160-4
10.3390/microorganisms9050964
10.1128/msphere.00194-22
10.1038/msb4100039
10.1186/s40168-018-0530-4
10.1038/s41422-020-0332-7
10.1016/j.vetmic.2013.01.024
10.3390/microorganisms8091267
10.1016/j.fsi.2019.12.046
10.3389/fimmu.2017.00559
10.1016/j.cbpb.2008.01.011
10.1371/journal.ppat.1009302
10.1016/j.vetmic.2011.09.002
10.1007/s10695-012-9613-5
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References Pérez, Balcázar, Ruiz-Zarzuela, Halaihel, Vendrell, de Blas (bib42) 2010; 3
Boutin, Bernatchez, Audet, Derôme (bib43) 2012; 155
Leonard, Carlson, Bishoff, Sendelbach, Yung, Ramzanali (bib16) 2014; 4
Minghetti, Schnell, Chadwick, Hogstrand, Bury (bib87) 2014; 154
Subramanian, Ross, MacKinnon (bib67) 2008; 150
Guivier, Pech, Chappaz, Gilles (bib14) 2020; 65
Easy, Ross (bib61) 2009; 4
Cheesman, Guillemin (bib84) 2007; 158
Llewellyn, Boutin, Hoseinifar, Derome (bib5) 2014; 5
Minniti, Hagen, Porcellato, Jørgensen, Pope, Vaaje-Kolstad (bib13) 2017; 8
Soto, Kidd, Mendez, Marancik, Revan, Hiltchie (bib73) 2013; 164
Espelid, Løkken, Steiro, Bøgwald (bib59) 1996; 6
Cheng, Ho, Aranda-Díaz, Jain, Yu, Meng (bib91) 2022; 185
Park, Kim (bib11) 2021; 78
Firmino, Fernández-Alacid, Vallejos-Vidal, Salomón, Sanahuja, Tort (bib78) 2021; 12
Sylvain, Cheaib, Llewellyn, Gabriel Correia, Barros Fagundes, Luis Val (bib24) 2016; 6
Kashinskaya, Simonov, Andree, Vlasenko, Polenogova, Kiriukhin (bib32) 2021; 131
Carlson, Hyde, Petrosino, Manage, Primm (bib38) 2015; 178
Brugman, Schneeberger, Witte, Klein, van den Bogert, Boekhorst (bib71) 2014; 5
Burns, Miller, Agarwal, Rolig, Milligan-Myhre, Seredick (bib72) 2017; 114
Kuebutornye, Wang, Lu, Abarike, Sakyi, Li (bib76) 2020; 97
Lokesh, Kiron (bib22) 2016; 6
Carlso, Leonard, Hyde, Petrosino, Primm (bib37) 2017; 10
Chiarello, Villéger, Bouvier, Bettarel, Bouvier (bib17) 2015; 91
Cámara-Ruiz, Cerezo, Guardiola, García-Beltrán, Balebona, Moriñigo (bib34) 2021; 9
Dierckens, Rekecki, Laureau, Sorgeloos, Boon, Van den Broeck (bib80) 2009; 11
Takeuchi, Fujiwara-Nagata, Katayama, Suetake (bib47) 2021; 11
(bib4) 2020
Gomez, Sunyer, Salinas (bib52) 2013; 35
Musharrafieh, Tacchi, Trujeque, LaPatra, Salinas (bib48) 2014; 169
Vatsos (bib45) 2017; 51
Boutin, Bernatchez, Audet, Derôme (bib20) 2013; 8
Bonga (bib60) 1997; 77
Kitano, Oda (bib7) 2006; 2
Noraini, Sabri, Siti-Zahrah (bib75) 2013; 25
Snoussi, Noumi, Cheriaa, Usai, Sechi, Zanetti (bib57) 2008; 31
Kelly, Salinas (bib63) 2017; 8
Horlick, Booth, Tetu (bib18) 2020; 8
Legrand, Catalano, Wos-Oxley, Wynne, Weyrich, Oxley (bib39) 2020; 2
Li, Wang, Su, Luo, Terhune, Beck (bib55) 2013; 39
Tapia-Paniagua, Ceballos-Francisco, Balebona, Esteban, Moriñigo (bib64) 2018; 75
David, Robin, Birkbeck (bib8) 2003; 56
Hooper, Littman, Macpherson (bib41) 2012; 336
Stagaman, Burns, Guillemin, Bohannan (bib70) 2017; 11
Chiarello, Auguet, Bettarel, Bouvier, Claverie, Graham (bib19) 2018; 6
Kelly, Takizawa, Sunyer, Salinas (bib69) 2017; 7
Chiarello, Paz-Vinas, Veyssière, Santoul, Loot, Ferriol (bib15) 2019; 11
Wen, Lee, Wang, Cheng, Huang (bib88) 2008; 278
Barton, Iwama (bib30) 1991; 1
Nigam, Kumari, Mittal, Mittal (bib54) 2012; 38
Siao, Lin, Chen, Wang (bib86) 2021; 11
Bury, Schnell, Hogstrand (bib89) 2014; 217
Hu, Huang, Liu, Sun, Tang, Chen (bib27) 2021; 218
Rosado, Pérez-Losada, Severino, Xavier (bib36) 2022; 83
Rakers, Gebert, Uppalapati, Meyer, Maderson, Sell (bib62) 2010; 19
Larsen, Tao, Bullard, Arias (bib21) 2013; 85
Kanther, Sun, Mühlbauer, Mackey, Flynn, Bagnat (bib85) 2011; 141
Zhang, Ding, Yu, Kong, Yin, Huang (bib31) 2018; 9
Yun, Shin, Bang, Lee, Cho, Baek (bib51) 2021; 22
Ellis (bib53) 1999; 9
Hansen, Olafsen (bib9) 1999; 38
Cámara-Ruiz, García-Beltrán, Cerezo, Balebona, Moriñigo, Esteban (bib29) 2022; 122
Schmidt, Smith, Melvin, Amaral-Zettler (bib23) 2015; 24
Sridhar, Manikandan, Palaniyappan, Sekar, Ramasamy (bib56) 2021; 21
Ley, Lozupone, Hamady, Knight, Gordon (bib1) 2008; 6
Brinchmann (bib68) 2016; 12
Legrand, Catalano, Wos-Oxley, Stephens, Landos, Bansemer (bib65) 2018; 8
Stecher, Hardt (bib49) 2008; 16
Rawls, Samuel, Gordon (bib81) 2004; 101
Sunagawa, Coelho, Chaffron, Kultima, Labadie, Salazar (bib3) 2015; 348
Baumgärtner, James, Ellison (bib79) 2022; 25
Zheng, Liwinski, Elinav (bib50) 2020; 30
Chen, Lin, Siao, Wang (bib35) 2022; 7
Gómez, Balcázar (bib6) 2008; 52
Soto, Wiles, Elzer, Macaluso, Hawke (bib74) 2011; 29
Romero, Navarrete (bib10) 2006; 51
Zhang, Xu, Shoemaker, Beck (bib46) 2020; 519
Pérez-Pascual, Vendrell-Fernández, Audrain, Bernal-Bayard, Patiño-Navarrete, Petit (bib82) 2021; 17
Meng, Ding, Wu, Wu, Cheng, Zhai (bib33) 2021; 12
Aranda-Díaz, Ng, Thomsen, Real-Ramírez, Dahan, Dittmar (bib90) 2022; 30
Legrand, Wynne, Weyrich, Oxley (bib66) 2020; 8
Sylvain, Holland, Bouslama, Audet-Gilbert, Lavoie, Val (bib12) 2020; 86
Berg, Rybakova, Fischer, Cernava, Vergès, Charles (bib2) 2020; 8
Rawls, Mahowald, Ley, Gordon (bib83) 2006; 127
Rosado, Xavier, Severino, Tavares, Cable, Pérez-Losada (bib44) 2019; 9
Minich, Petrus, Michael, Michael, Knight, Allen (bib26) 2020; 5
Dixon, Bainbridge, Darveau (bib58) 2004; 35
Mohammadi, Adorian, Rafiee (bib77) 2020; 26
Yang, Song, Lim (bib40) 2020; 237
Ellison, Wilcockson, Cable (bib25) 2021; 9
Cheaib, Seghouani, Ijaz, Derome (bib28) 2020; 8
David (10.1016/j.fsi.2023.108869_bib8) 2003; 56
Chiarello (10.1016/j.fsi.2023.108869_bib19) 2018; 6
Nigam (10.1016/j.fsi.2023.108869_bib54) 2012; 38
Li (10.1016/j.fsi.2023.108869_bib55) 2013; 39
Brugman (10.1016/j.fsi.2023.108869_bib71) 2014; 5
Mohammadi (10.1016/j.fsi.2023.108869_bib77) 2020; 26
Barton (10.1016/j.fsi.2023.108869_bib30) 1991; 1
Lokesh (10.1016/j.fsi.2023.108869_bib22) 2016; 6
Takeuchi (10.1016/j.fsi.2023.108869_bib47) 2021; 11
Kitano (10.1016/j.fsi.2023.108869_bib7) 2006; 2
Chiarello (10.1016/j.fsi.2023.108869_bib15) 2019; 11
Tapia-Paniagua (10.1016/j.fsi.2023.108869_bib64) 2018; 75
Kuebutornye (10.1016/j.fsi.2023.108869_bib76) 2020; 97
Minghetti (10.1016/j.fsi.2023.108869_bib87) 2014; 154
Guivier (10.1016/j.fsi.2023.108869_bib14) 2020; 65
Hansen (10.1016/j.fsi.2023.108869_bib9) 1999; 38
Snoussi (10.1016/j.fsi.2023.108869_bib57) 2008; 31
Dixon (10.1016/j.fsi.2023.108869_bib58) 2004; 35
Yang (10.1016/j.fsi.2023.108869_bib40) 2020; 237
Gomez (10.1016/j.fsi.2023.108869_bib52) 2013; 35
Brinchmann (10.1016/j.fsi.2023.108869_bib68) 2016; 12
Ley (10.1016/j.fsi.2023.108869_bib1) 2008; 6
Kashinskaya (10.1016/j.fsi.2023.108869_bib32) 2021; 131
Noraini (10.1016/j.fsi.2023.108869_bib75) 2013; 25
Llewellyn (10.1016/j.fsi.2023.108869_bib5) 2014; 5
Horlick (10.1016/j.fsi.2023.108869_bib18) 2020; 8
Boutin (10.1016/j.fsi.2023.108869_bib20) 2013; 8
Cheng (10.1016/j.fsi.2023.108869_bib91) 2022; 185
Pérez-Pascual (10.1016/j.fsi.2023.108869_bib82) 2021; 17
Carlso (10.1016/j.fsi.2023.108869_bib37) 2017; 10
Stecher (10.1016/j.fsi.2023.108869_bib49) 2008; 16
Soto (10.1016/j.fsi.2023.108869_bib73) 2013; 164
Boutin (10.1016/j.fsi.2023.108869_bib43) 2012; 155
Rakers (10.1016/j.fsi.2023.108869_bib62) 2010; 19
Firmino (10.1016/j.fsi.2023.108869_bib78) 2021; 12
Baumgärtner (10.1016/j.fsi.2023.108869_bib79) 2022; 25
Pérez (10.1016/j.fsi.2023.108869_bib42) 2010; 3
Ellis (10.1016/j.fsi.2023.108869_bib53) 1999; 9
Leonard (10.1016/j.fsi.2023.108869_bib16) 2014; 4
Park (10.1016/j.fsi.2023.108869_bib11) 2021; 78
Ellison (10.1016/j.fsi.2023.108869_bib25) 2021; 9
Meng (10.1016/j.fsi.2023.108869_bib33) 2021; 12
Stagaman (10.1016/j.fsi.2023.108869_bib70) 2017; 11
Sunagawa (10.1016/j.fsi.2023.108869_bib3) 2015; 348
Subramanian (10.1016/j.fsi.2023.108869_bib67) 2008; 150
Kanther (10.1016/j.fsi.2023.108869_bib85) 2011; 141
Legrand (10.1016/j.fsi.2023.108869_bib39) 2020; 2
Chiarello (10.1016/j.fsi.2023.108869_bib17) 2015; 91
Bonga (10.1016/j.fsi.2023.108869_bib60) 1997; 77
Minich (10.1016/j.fsi.2023.108869_bib26) 2020; 5
Cheesman (10.1016/j.fsi.2023.108869_bib84) 2007; 158
Aranda-Díaz (10.1016/j.fsi.2023.108869_bib90) 2022; 30
Bury (10.1016/j.fsi.2023.108869_bib89) 2014; 217
Berg (10.1016/j.fsi.2023.108869_bib2) 2020; 8
Cámara-Ruiz (10.1016/j.fsi.2023.108869_bib29) 2022; 122
Legrand (10.1016/j.fsi.2023.108869_bib65) 2018; 8
Cámara-Ruiz (10.1016/j.fsi.2023.108869_bib34) 2021; 9
Soto (10.1016/j.fsi.2023.108869_bib74) 2011; 29
Chen (10.1016/j.fsi.2023.108869_bib35) 2022; 7
Zhang (10.1016/j.fsi.2023.108869_bib46) 2020; 519
Dierckens (10.1016/j.fsi.2023.108869_bib80) 2009; 11
Larsen (10.1016/j.fsi.2023.108869_bib21) 2013; 85
Sylvain (10.1016/j.fsi.2023.108869_bib24) 2016; 6
Cheaib (10.1016/j.fsi.2023.108869_bib28) 2020; 8
Kelly (10.1016/j.fsi.2023.108869_bib69) 2017; 7
Schmidt (10.1016/j.fsi.2023.108869_bib23) 2015; 24
Yun (10.1016/j.fsi.2023.108869_bib51) 2021; 22
Kelly (10.1016/j.fsi.2023.108869_bib63) 2017; 8
Espelid (10.1016/j.fsi.2023.108869_bib59) 1996; 6
Minniti (10.1016/j.fsi.2023.108869_bib13) 2017; 8
(10.1016/j.fsi.2023.108869_bib4) 2020
Gómez (10.1016/j.fsi.2023.108869_bib6) 2008; 52
Burns (10.1016/j.fsi.2023.108869_bib72) 2017; 114
Hooper (10.1016/j.fsi.2023.108869_bib41) 2012; 336
Vatsos (10.1016/j.fsi.2023.108869_bib45) 2017; 51
Zheng (10.1016/j.fsi.2023.108869_bib50) 2020; 30
Sridhar (10.1016/j.fsi.2023.108869_bib56) 2021; 21
Romero (10.1016/j.fsi.2023.108869_bib10) 2006; 51
Wen (10.1016/j.fsi.2023.108869_bib88) 2008; 278
Rawls (10.1016/j.fsi.2023.108869_bib83) 2006; 127
Siao (10.1016/j.fsi.2023.108869_bib86) 2021; 11
Rosado (10.1016/j.fsi.2023.108869_bib36) 2022; 83
Zhang (10.1016/j.fsi.2023.108869_bib31) 2018; 9
Musharrafieh (10.1016/j.fsi.2023.108869_bib48) 2014; 169
Sylvain (10.1016/j.fsi.2023.108869_bib12) 2020; 86
Legrand (10.1016/j.fsi.2023.108869_bib66) 2020; 8
Hu (10.1016/j.fsi.2023.108869_bib27) 2021; 218
Easy (10.1016/j.fsi.2023.108869_bib61) 2009; 4
Rawls (10.1016/j.fsi.2023.108869_bib81) 2004; 101
Carlson (10.1016/j.fsi.2023.108869_bib38) 2015; 178
Rosado (10.1016/j.fsi.2023.108869_bib44) 2019; 9
References_xml – volume: 101
  start-page: 4596
  year: 2004
  end-page: 4601
  ident: bib81
  article-title: Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota
  publication-title: Proc. Natl. Acad. Sci. USA
– volume: 4
  start-page: 335
  year: 2014
  end-page: 343
  ident: bib16
  article-title: The skin microbiome of Gambusia affinis is defined and selective
  publication-title: Adv. Microbiol.
– volume: 26
  start-page: 1476
  year: 2020
  end-page: 1492
  ident: bib77
  article-title: Beneficial effects of Bacillus subtilis on water quality, growth, immune responses, endotoxemia and protection against lipopolysaccharide-induced damages in Oreochromis niloticus under biofloc technology system
  publication-title: Aquacult. Nutr.
– volume: 158
  start-page: 2
  year: 2007
  end-page: 9
  ident: bib84
  article-title: We know you are in there: conversing with the indigenous gut microbiota
  publication-title: Res. Microbiol.
– volume: 11
  start-page: 605
  year: 2019
  end-page: 614
  ident: bib15
  article-title: Environmental conditions and neutral processes shape the skin microbiome of European catfish (Silurus glanis) populations of Southwestern France
  publication-title: Environmental Microbiology Reports
– volume: 85
  start-page: 483
  year: 2013
  end-page: 494
  ident: bib21
  article-title: Diversity of the skin microbiota of fishes: evidence for host species specificity
  publication-title: FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Ecol.
– volume: 5
  year: 2020
  ident: bib26
  article-title: Temporal, environmental, and biological drivers of the mucosal microbiome in a wild marine fish, Scomber japonicus
  publication-title: mSphere
– volume: 12
  start-page: 2056
  year: 2016
  end-page: 2063
  ident: bib68
  article-title: Immune relevant molecules identified in the skin mucus of fish using -omics technologies
  publication-title: Mol. Biosyst.
– volume: 7
  year: 2022
  ident: bib35
  article-title: Aeromonas hydrophila induces skin disturbance through mucosal microbiota dysbiosis in striped catfish pangasianodon hypophthalmus
  publication-title: mSphere
– volume: 51
  start-page: 353
  year: 2017
  end-page: 364
  ident: bib45
  article-title: Standardizing the microbiota of fish used in research
  publication-title: Lab. Anim
– volume: 8
  year: 2018
  ident: bib65
  article-title: The inner workings of the outer surface: skin and gill microbiota as indicators of changing gut health in yellowtail kingfish
  publication-title: Front. Microbiol.
– volume: 348
  year: 2015
  ident: bib3
  article-title: Structure and function of the global ocean microbiome
  publication-title: Science
– volume: 52
  start-page: 145
  year: 2008
  end-page: 154
  ident: bib6
  article-title: A review on the interactions between gut microbiota and innate immunity of fish
  publication-title: FEMS Immunol. Med. Microbiol.
– volume: 8
  start-page: 103
  year: 2020
  ident: bib2
  article-title: Microbiome definition re-visited: old concepts and new challenges
  publication-title: Microbiome
– volume: 9
  start-page: 964
  year: 2021
  ident: bib34
  article-title: Alteration of the immune response and the microbiota of the skin during a natural infection by Vibrio harveyi in European seabass (Dicentrarchus labrax)
  publication-title: Microorganisms
– volume: 127
  start-page: 423
  year: 2006
  end-page: 433
  ident: bib83
  article-title: Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection
  publication-title: Cell
– volume: 56
  start-page: 105
  year: 2003
  end-page: 113
  ident: bib8
  article-title: Bacterial influences on Atlantic halibut Hippoglossus hippoglossus yolk sac larval survival and start feed response
  publication-title: Dis. Aquat. Org.
– volume: 17
  year: 2021
  ident: bib82
  article-title: Gnotobiotic rainbow trout (Oncorhynchus mykiss) model reveals endogenous bacteria that protect against Flavobacterium columnare infection
  publication-title: PLoS Pathog.
– volume: 8
  start-page: 14
  year: 2020
  ident: bib28
  article-title: Community recovery dynamics in yellow perch microbiome after gradual and constant metallic perturbations
  publication-title: Microbiome
– volume: 336
  start-page: 1268
  year: 2012
  end-page: 1273
  ident: bib41
  article-title: Interactions between the microbiota and the immune system
  publication-title: Science
– volume: 114
  start-page: 11181
  year: 2017
  end-page: 11186
  ident: bib72
  article-title: Interhost dispersal alters microbiome assembly and can overwhelm host innate immunity in an experimental zebrafish model
  publication-title: Proc. Natl. Acad. Sci. USA
– volume: 8
  start-page: 1267
  year: 2020
  ident: bib66
  article-title: Investigating both mucosal immunity and microbiota in response to gut enteritis in yellowtail kingfish
  publication-title: Microorganisms
– volume: 97
  start-page: 83
  year: 2020
  end-page: 95
  ident: bib76
  article-title: Effects of three host-associated Bacillus species on mucosal immunity and gut health of Nile tilapia, Oreochromis niloticus and its resistance against Aeromonas hydrophila infection
  publication-title: Fish Shellfish Immunol.
– volume: 39
  start-page: 447
  year: 2013
  end-page: 455
  ident: bib55
  article-title: Evasion of mucosal defenses during Aeromonas hydrophila infection of channel catfish (Ictalurus punctatus) skin
  publication-title: Dev. Comp. Immunol.
– volume: 11
  start-page: 1630
  year: 2017
  end-page: 1639
  ident: bib70
  article-title: The role of adaptive immunity as an ecological filter on the gut microbiota in zebrafish
  publication-title: ISME J.
– volume: 12
  year: 2021
  ident: bib78
  article-title: Carvacrol, thymol, and garlic essential oil promote skin innate immunity in gilthead seabream (sparus aurata) through the multifactorial modulation of the secretory pathway and enhancement of mucus protective capacity
  publication-title: Front. Immunol.
– volume: 154
  start-page: 184
  year: 2014
  end-page: 192
  ident: bib87
  article-title: A primary FIsh Gill Cell System (FIGCS) for environmental monitoring of river waters
  publication-title: Aquat. Toxicol.
– volume: 29
  start-page: 593
  year: 2011
  end-page: 598
  ident: bib74
  article-title: Attenuated Francisella asiatica iglC mutant induces protective immunity to francisellosis in tilapia
  publication-title: Vaccine
– volume: 24
  start-page: 2537
  year: 2015
  end-page: 2550
  ident: bib23
  article-title: Community assembly of a euryhaline fish microbiome during salinity acclimation
  publication-title: Mol. Ecol.
– volume: 19
  start-page: 313
  year: 2010
  end-page: 324
  ident: bib62
  article-title: ‘Fish matters’: the relevance of fish skin biology to investigative dermatology
  publication-title: Exp. Dermatol.
– volume: 278
  start-page: 14
  year: 2008
  end-page: 21
  ident: bib88
  article-title: Development of two cell lines from Epinephelus coioides brain tissue for characterization of betanodavirus and megalocytivirus infectivity and propagation
  publication-title: Aquaculture
– volume: 150
  start-page: 85
  year: 2008
  end-page: 92
  ident: bib67
  article-title: Comparison of antimicrobial activity in the epidermal mucus extracts of fish
  publication-title: Comp. Biochem. Physiol. B Biochem. Mol. Biol.
– volume: 4
  start-page: 159
  year: 2009
  end-page: 167
  ident: bib61
  article-title: Changes in Atlantic salmon (Salmo salar) epidermal mucus protein composition profiles following infection with sea lice (Lepeophtheirus salmonis)
  publication-title: Comp. Biochem. Physiol. Genom. Proteonomics
– volume: 164
  start-page: 77
  year: 2013
  end-page: 84
  ident: bib73
  article-title: Francisella noatunensis subsp. orientalis pathogenesis analyzed by experimental immersion challenge in Nile tilapia, Oreochromis niloticus (L.)
  publication-title: Vet. Microbiol.
– volume: 30
  start-page: 260
  year: 2022
  end-page: 272.e5
  ident: bib90
  article-title: Establishment and characterization of stable, diverse, fecal-derived in vitro microbial communities that model the intestinal microbiota
  publication-title: Cell Host Microbe
– volume: 155
  start-page: 355
  year: 2012
  end-page: 361
  ident: bib43
  article-title: Antagonistic effect of indigenous skin bacteria of brook charr (Salvelinus fontinalis) against Flavobacterium columnare and F. psychrophilum
  publication-title: Vet. Microbiol.
– volume: 38
  start-page: 1245
  year: 2012
  end-page: 1256
  ident: bib54
  article-title: Comparative analysis of innate immune parameters of the skin mucous secretions from certain freshwater teleosts, inhabiting different ecological niches
  publication-title: Fish Physiol. Biochem.
– volume: 7
  year: 2017
  ident: bib69
  article-title: Rainbow trout (Oncorhynchus mykiss) secretory component binds to commensal bacteria and pathogens
  publication-title: Sci. Rep.
– volume: 25
  year: 2022
  ident: bib79
  article-title: The supplementation of a prebiotic improves the microbial community in the gut and the skin of Atlantic salmon (Salmo salar)
  publication-title: Aquaculture Reports
– volume: 2
  year: 2006
  ident: bib7
  article-title: Robustness trade-offs and host–microbial symbiosis in the immune system
  publication-title: Mol. Syst. Biol.
– volume: 8
  year: 2013
  ident: bib20
  article-title: Network analysis highlights complex interactions between pathogen, host and commensal microbiota
  publication-title: PLoS One
– volume: 22
  start-page: 7804
  year: 2021
  ident: bib51
  article-title: Skin wound healing rate in fish depends on species and microbiota
  publication-title: Int. J. Mol. Sci.
– volume: 25
  start-page: 142
  year: 2013
  end-page: 148
  ident: bib75
  article-title: Efficacy of spray administration of formalin-killed Streptococcus agalactiae in hybrid red Tilapia
  publication-title: J. Aquat. Anim. Health
– volume: 1
  start-page: 3
  year: 1991
  end-page: 26
  ident: bib30
  article-title: Physiological changes in fish from stress in aquaculture with emphasis on the response and effects of corticosteroids
  publication-title: Annu. Rev. Fish Dis.
– volume: 6
  year: 2016
  ident: bib24
  article-title: pH drop impacts differentially skin and gut microbiota of the Amazonian fish tambaqui (Colossoma macropomum)
  publication-title: Sci. Rep.
– volume: 11
  start-page: 526
  year: 2009
  end-page: 533
  ident: bib80
  article-title: Development of a bacterial challenge test for gnotobiotic sea bass (Dicentrarchus labrax) larvae
  publication-title: Environ. Microbiol.
– volume: 131
  start-page: 1722
  year: 2021
  end-page: 1741
  ident: bib32
  article-title: Microbial community structure in a host–parasite system: the case of Prussian carp and its parasitic crustaceans
  publication-title: J. Appl. Microbiol.
– volume: 11
  start-page: 7518
  year: 2021
  ident: bib47
  article-title: Skin bacteria of rainbow trout antagonistic to the fish pathogen Flavobacterium psychrophilum
  publication-title: Sci. Rep.
– volume: 9
  year: 2019
  ident: bib44
  article-title: Effects of disease, antibiotic treatment and recovery trajectory on the microbiome of farmed seabass (Dicentrarchus labrax)
  publication-title: Sci. Rep.
– volume: 30
  start-page: 492
  year: 2020
  end-page: 506
  ident: bib50
  article-title: Interaction between microbiota and immunity in health and disease
  publication-title: Cell Res.
– volume: 11
  year: 2021
  ident: bib86
  article-title: Establishment of a striped catfish skin explant model for studying the skin response in Aeromonas hydrophila infections
  publication-title: Sci. Rep.
– volume: 75
  start-page: 381
  year: 2018
  end-page: 390
  ident: bib64
  article-title: Mucus glycosylation, immunity and bacterial microbiota associated to the skin of experimentally ulcered gilthead seabream (Sparus aurata)
  publication-title: Fish Shellfish Immunol.
– volume: 6
  start-page: 776
  year: 2008
  end-page: 788
  ident: bib1
  article-title: Worlds within worlds: evolution of the vertebrate gut microbiota
  publication-title: Nat. Rev. Microbiol.
– volume: 8
  year: 2020
  ident: bib18
  article-title: Alternative dietary protein and water temperature influence the skin and gut microbial communities of yellowtail kingfish (Seriola lalandi)
  publication-title: PeerJ
– volume: 519
  year: 2020
  ident: bib46
  article-title: The severity of motile Aeromonas septicemia caused by virulent Aeromonas hydrophila in channel catfish is influenced by nutrients and microbes in water
  publication-title: Aquaculture
– volume: 5
  start-page: 737
  year: 2014
  end-page: 747
  ident: bib71
  article-title: T lymphocytes control microbial composition by regulating the abundance of Vibrio in the zebrafish gut
  publication-title: Gut Microb.
– volume: 217
  start-page: 639
  year: 2014
  end-page: 650
  ident: bib89
  article-title: Gill cell culture systems as models for aquatic environmental monitoring
  publication-title: J. Exp. Biol.
– volume: 51
  start-page: 422
  year: 2006
  end-page: 430
  ident: bib10
  article-title: 16S rDNA-based analysis of dominant bacterial populations associated with early life stages of coho salmon (Oncorhynchus kisutch)
  publication-title: Microb. Ecol.
– volume: 9
  year: 2018
  ident: bib31
  article-title: The change of teleost skin commensal microbiota is associated with skin mucosal transcriptomic responses during parasitic infection by Ichthyophthirius multifillis
  publication-title: Front. Immunol.
– volume: 6
  start-page: 95
  year: 1996
  end-page: 110
  ident: bib59
  article-title: Effects of cortisol and stress on the immune system in Atlantic Salmon (Salmo salarL.)
  publication-title: Fish Shellfish Immunol.
– volume: 21
  start-page: 233
  year: 2021
  end-page: 244
  ident: bib56
  article-title: Correlation between three freshwater fish skin mucus antiproliferative effect and its elemental composition role in bacterial growth
  publication-title: Turk. J. Fish. Aquat. Sci.
– volume: 8
  year: 2017
  ident: bib63
  article-title: Under pressure: interactions between commensal microbiota and the teleost immune system
  publication-title: Front. Immunol.
– volume: 218
  year: 2021
  ident: bib27
  article-title: Shift in skin microbiota and immune functions of zebrafish after combined exposure to perfluorobutanesulfonate and probiotic Lactobacillus rhamnosus
  publication-title: Ecotoxicol. Environ. Saf.
– volume: 185
  start-page: 3617
  year: 2022
  end-page: 3636.e19
  ident: bib91
  article-title: Design, construction, and in vivo augmentation of a complex gut microbiome
  publication-title: Cell
– volume: 9
  start-page: 222
  year: 2021
  ident: bib25
  article-title: Circadian dynamics of the teleost skin immune-microbiome interface
  publication-title: Microbiome
– volume: 86
  year: 2020
  ident: bib12
  article-title: Fish skin and gut microbiomes show contrasting signatures of host species and habitat
  publication-title: Appl. Environ. Microbiol.
– volume: 237
  year: 2020
  ident: bib40
  article-title: A review of the toxicity in fish exposed to antibiotics
  publication-title: Comp. Biochem. Physiol. C Toxicol. Pharmacol.
– volume: 9
  start-page: 291
  year: 1999
  end-page: 308
  ident: bib53
  article-title: Immunity to bacteria in fish
  publication-title: Fish Shellfish Immunol.
– volume: 8
  year: 2017
  ident: bib13
  article-title: The skin-mucus microbial community of farmed atlantic salmon (Salmo salar)
  publication-title: Front. Microbiol.
– volume: 2
  start-page: 26
  year: 2020
  ident: bib39
  article-title: Antibiotic-induced alterations and repopulation dynamics of yellowtail kingfish microbiota
  publication-title: Animal Microbiome
– volume: 78
  start-page: 1798
  year: 2021
  end-page: 1806
  ident: bib11
  article-title: Insights into the gut and skin microbiome of freshwater fish, smelt (Hypomesus nipponensis)
  publication-title: Curr. Microbiol.
– volume: 178
  start-page: 163
  year: 2015
  end-page: 168
  ident: bib38
  article-title: The host effects of Gambusia affinis with an antibiotic-disrupted microbiome
  publication-title: Comp. Biochem. Physiol. C Toxicol. Pharmacol.
– volume: 91
  year: 2015
  ident: bib17
  article-title: High diversity of skin-associated bacterial communities of marine fishes is promoted by their high variability among body parts, individuals and species
  publication-title: FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Ecol.
– volume: 6
  start-page: 147
  year: 2018
  ident: bib19
  article-title: Skin microbiome of coral reef fish is highly variable and driven by host phylogeny and diet
  publication-title: Microbiome
– volume: 77
  start-page: 591
  year: 1997
  end-page: 625
  ident: bib60
  article-title: The stress response in fish
  publication-title: Physiol. Rev.
– volume: 31
  start-page: 489
  year: 2008
  end-page: 500
  ident: bib57
  article-title: Adhesive properties of environmental Vibrio alginolyticus strains to biotic and abiotic surfaces
  publication-title: New Microbiol.
– volume: 6
  year: 2016
  ident: bib22
  article-title: Transition from freshwater to seawater reshapes the skin-associated microbiota of Atlantic salmon
  publication-title: Sci. Rep.
– volume: 122
  start-page: 234
  year: 2022
  end-page: 245
  ident: bib29
  article-title: Immunomodulation and skin microbiota perturbations during an episode of chronic stress in gilthead seabream
  publication-title: Fish Shellfish Immunol.
– volume: 10
  start-page: 143
  year: 2017
  end-page: 154
  ident: bib37
  article-title: Microbiome disruption and recovery in the fish Gambusia affinis following exposure to broad-spectrum antibiotic
  publication-title: Infect. Drug Resist.
– volume: 83
  start-page: 789
  year: 2022
  end-page: 797
  ident: bib36
  article-title: Monitoring infection and antibiotic treatment in the skin microbiota of farmed European seabass (Dicentrarchus labrax) fingerlings
  publication-title: Microb. Ecol.
– volume: 65
  start-page: 446
  year: 2020
  end-page: 459
  ident: bib14
  article-title: Microbiota associated with the skin, gills, and gut of the fish Parachondrostoma toxostoma from the Rhône basin
  publication-title: Freshw. Biol.
– volume: 3
  start-page: 355
  year: 2010
  end-page: 360
  ident: bib42
  article-title: Host–microbiota interactions within the fish intestinal ecosystem
  publication-title: Mucosal Immunol.
– volume: 141
  start-page: 197
  year: 2011
  end-page: 207
  ident: bib85
  article-title: Microbial colonization induces dynamic temporal and spatial patterns of NF-κB activation in the zebrafish digestive tract
  publication-title: Gastroenterology
– year: 2020
  ident: bib4
  article-title: The State of World Fisheries and Aquaculture 2020: Sustainability in Action
– volume: 5
  year: 2014
  ident: bib5
  article-title: Teleost microbiomes: the state of the art in their characterization, manipulation and importance in aquaculture and fisheries
  publication-title: Front. Microbiol.
– volume: 38
  start-page: 1
  year: 1999
  end-page: 26
  ident: bib9
  article-title: Bacterial interactions in early life stages of marine cold water fish
  publication-title: Microb. Ecol.
– volume: 12
  year: 2021
  ident: bib33
  article-title: Interactions between commensal microbiota and mucosal immunity in teleost fish during viral infection with SVCV
  publication-title: Front. Immunol.
– volume: 35
  start-page: 1729
  year: 2013
  end-page: 1739
  ident: bib52
  article-title: The mucosal immune system of fish: the evolution of tolerating commensals while fighting pathogens
  publication-title: Fish Shellfish Immunol.
– volume: 16
  start-page: 107
  year: 2008
  end-page: 114
  ident: bib49
  article-title: The role of microbiota in infectious disease
  publication-title: Trends Microbiol.
– volume: 35
  start-page: 53
  year: 2004
  end-page: 74
  ident: bib58
  article-title: Modulation of the innate immune response within the periodontium
  publication-title: Periodontol. 2000
– volume: 169
  start-page: 80
  year: 2014
  end-page: 88
  ident: bib48
  article-title: Staphylococcus warneri, a resident skin commensal of rainbow trout (Oncorhynchus mykiss) with pathobiont characteristics
  publication-title: Vet. Microbiol.
– volume: 6
  start-page: 95
  issue: 2
  year: 1996
  ident: 10.1016/j.fsi.2023.108869_bib59
  article-title: Effects of cortisol and stress on the immune system in Atlantic Salmon (Salmo salarL.)
  publication-title: Fish Shellfish Immunol.
  doi: 10.1006/fsim.1996.0011
– volume: 4
  start-page: 159
  issue: 3
  year: 2009
  ident: 10.1016/j.fsi.2023.108869_bib61
  article-title: Changes in Atlantic salmon (Salmo salar) epidermal mucus protein composition profiles following infection with sea lice (Lepeophtheirus salmonis)
  publication-title: Comp. Biochem. Physiol. Genom. Proteonomics
  doi: 10.1016/j.cbd.2009.02.001
– volume: 30
  start-page: 260
  issue: 2
  year: 2022
  ident: 10.1016/j.fsi.2023.108869_bib90
  article-title: Establishment and characterization of stable, diverse, fecal-derived in vitro microbial communities that model the intestinal microbiota
  publication-title: Cell Host Microbe
  doi: 10.1016/j.chom.2021.12.008
– volume: 86
  issue: 16
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib12
  article-title: Fish skin and gut microbiomes show contrasting signatures of host species and habitat
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.00789-20
– volume: 12
  year: 2021
  ident: 10.1016/j.fsi.2023.108869_bib33
  article-title: Interactions between commensal microbiota and mucosal immunity in teleost fish during viral infection with SVCV
  publication-title: Front. Immunol.
  doi: 10.3389/fimmu.2021.654758
– volume: 21
  start-page: 233
  year: 2021
  ident: 10.1016/j.fsi.2023.108869_bib56
  article-title: Correlation between three freshwater fish skin mucus antiproliferative effect and its elemental composition role in bacterial growth
  publication-title: Turk. J. Fish. Aquat. Sci.
  doi: 10.4194/1303-2712-v21_5_03
– volume: 158
  start-page: 2
  issue: 1
  year: 2007
  ident: 10.1016/j.fsi.2023.108869_bib84
  article-title: We know you are in there: conversing with the indigenous gut microbiota
  publication-title: Res. Microbiol.
  doi: 10.1016/j.resmic.2006.10.005
– volume: 6
  start-page: 776
  issue: 10
  year: 2008
  ident: 10.1016/j.fsi.2023.108869_bib1
  article-title: Worlds within worlds: evolution of the vertebrate gut microbiota
  publication-title: Nat. Rev. Microbiol.
  doi: 10.1038/nrmicro1978
– volume: 10
  start-page: 143
  year: 2017
  ident: 10.1016/j.fsi.2023.108869_bib37
  article-title: Microbiome disruption and recovery in the fish Gambusia affinis following exposure to broad-spectrum antibiotic
  publication-title: Infect. Drug Resist.
  doi: 10.2147/IDR.S129055
– volume: 178
  start-page: 163
  year: 2015
  ident: 10.1016/j.fsi.2023.108869_bib38
  article-title: The host effects of Gambusia affinis with an antibiotic-disrupted microbiome
  publication-title: Comp. Biochem. Physiol. C Toxicol. Pharmacol.
  doi: 10.1016/j.cbpc.2015.10.004
– volume: 101
  start-page: 4596
  issue: 13
  year: 2004
  ident: 10.1016/j.fsi.2023.108869_bib81
  article-title: Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.0400706101
– volume: 185
  start-page: 3617
  issue: 19
  year: 2022
  ident: 10.1016/j.fsi.2023.108869_bib91
  article-title: Design, construction, and in vivo augmentation of a complex gut microbiome
  publication-title: Cell
  doi: 10.1016/j.cell.2022.08.003
– volume: 127
  start-page: 423
  issue: 2
  year: 2006
  ident: 10.1016/j.fsi.2023.108869_bib83
  article-title: Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection
  publication-title: Cell
  doi: 10.1016/j.cell.2006.08.043
– volume: 19
  start-page: 313
  issue: 4
  year: 2010
  ident: 10.1016/j.fsi.2023.108869_bib62
  article-title: ‘Fish matters’: the relevance of fish skin biology to investigative dermatology
  publication-title: Exp. Dermatol.
  doi: 10.1111/j.1600-0625.2009.01059.x
– volume: 75
  start-page: 381
  year: 2018
  ident: 10.1016/j.fsi.2023.108869_bib64
  article-title: Mucus glycosylation, immunity and bacterial microbiota associated to the skin of experimentally ulcered gilthead seabream (Sparus aurata)
  publication-title: Fish Shellfish Immunol.
  doi: 10.1016/j.fsi.2018.02.006
– volume: 11
  issue: 1
  year: 2021
  ident: 10.1016/j.fsi.2023.108869_bib86
  article-title: Establishment of a striped catfish skin explant model for studying the skin response in Aeromonas hydrophila infections
  publication-title: Sci. Rep.
  doi: 10.1038/s41598-021-98583-8
– volume: 6
  issue: 1
  year: 2016
  ident: 10.1016/j.fsi.2023.108869_bib24
  article-title: pH drop impacts differentially skin and gut microbiota of the Amazonian fish tambaqui (Colossoma macropomum)
  publication-title: Sci. Rep.
  doi: 10.1038/srep32032
– volume: 38
  start-page: 1
  issue: 1
  year: 1999
  ident: 10.1016/j.fsi.2023.108869_bib9
  article-title: Bacterial interactions in early life stages of marine cold water fish
  publication-title: Microb. Ecol.
  doi: 10.1007/s002489900158
– volume: 8
  year: 2017
  ident: 10.1016/j.fsi.2023.108869_bib13
  article-title: The skin-mucus microbial community of farmed atlantic salmon (Salmo salar)
  publication-title: Front. Microbiol.
  doi: 10.3389/fmicb.2017.02043
– volume: 114
  start-page: 11181
  issue: 42
  year: 2017
  ident: 10.1016/j.fsi.2023.108869_bib72
  article-title: Interhost dispersal alters microbiome assembly and can overwhelm host innate immunity in an experimental zebrafish model
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.1702511114
– volume: 8
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib18
  article-title: Alternative dietary protein and water temperature influence the skin and gut microbial communities of yellowtail kingfish (Seriola lalandi)
  publication-title: PeerJ
  doi: 10.7717/peerj.8705
– volume: 77
  start-page: 591
  issue: 3
  year: 1997
  ident: 10.1016/j.fsi.2023.108869_bib60
  article-title: The stress response in fish
  publication-title: Physiol. Rev.
  doi: 10.1152/physrev.1997.77.3.591
– volume: 8
  issue: 12
  year: 2013
  ident: 10.1016/j.fsi.2023.108869_bib20
  article-title: Network analysis highlights complex interactions between pathogen, host and commensal microbiota
  publication-title: PLoS One
  doi: 10.1371/journal.pone.0084772
– volume: 5
  issue: 3
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib26
  article-title: Temporal, environmental, and biological drivers of the mucosal microbiome in a wild marine fish, Scomber japonicus
  publication-title: mSphere
  doi: 10.1128/mSphere.00401-20
– volume: 336
  start-page: 1268
  issue: 6086
  year: 2012
  ident: 10.1016/j.fsi.2023.108869_bib41
  article-title: Interactions between the microbiota and the immune system
  publication-title: Science
  doi: 10.1126/science.1223490
– volume: 4
  start-page: 335
  year: 2014
  ident: 10.1016/j.fsi.2023.108869_bib16
  article-title: The skin microbiome of Gambusia affinis is defined and selective
  publication-title: Adv. Microbiol.
  doi: 10.4236/aim.2014.47040
– volume: 26
  start-page: 1476
  issue: 5
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib77
  article-title: Beneficial effects of Bacillus subtilis on water quality, growth, immune responses, endotoxemia and protection against lipopolysaccharide-induced damages in Oreochromis niloticus under biofloc technology system
  publication-title: Aquacult. Nutr.
  doi: 10.1111/anu.13096
– volume: 51
  start-page: 353
  issue: 4
  year: 2017
  ident: 10.1016/j.fsi.2023.108869_bib45
  article-title: Standardizing the microbiota of fish used in research
  publication-title: Lab. Anim
  doi: 10.1177/0023677216678825
– volume: 9
  start-page: 291
  issue: 4
  year: 1999
  ident: 10.1016/j.fsi.2023.108869_bib53
  article-title: Immunity to bacteria in fish
  publication-title: Fish Shellfish Immunol.
  doi: 10.1006/fsim.1998.0192
– volume: 83
  start-page: 789
  issue: 3
  year: 2022
  ident: 10.1016/j.fsi.2023.108869_bib36
  article-title: Monitoring infection and antibiotic treatment in the skin microbiota of farmed European seabass (Dicentrarchus labrax) fingerlings
  publication-title: Microb. Ecol.
  doi: 10.1007/s00248-021-01795-8
– volume: 218
  year: 2021
  ident: 10.1016/j.fsi.2023.108869_bib27
  article-title: Shift in skin microbiota and immune functions of zebrafish after combined exposure to perfluorobutanesulfonate and probiotic Lactobacillus rhamnosus
  publication-title: Ecotoxicol. Environ. Saf.
  doi: 10.1016/j.ecoenv.2021.112310
– volume: 141
  start-page: 197
  issue: 1
  year: 2011
  ident: 10.1016/j.fsi.2023.108869_bib85
  article-title: Microbial colonization induces dynamic temporal and spatial patterns of NF-κB activation in the zebrafish digestive tract
  publication-title: Gastroenterology
  doi: 10.1053/j.gastro.2011.03.042
– volume: 39
  start-page: 447
  issue: 4
  year: 2013
  ident: 10.1016/j.fsi.2023.108869_bib55
  article-title: Evasion of mucosal defenses during Aeromonas hydrophila infection of channel catfish (Ictalurus punctatus) skin
  publication-title: Dev. Comp. Immunol.
  doi: 10.1016/j.dci.2012.11.009
– volume: 91
  issue: 7
  year: 2015
  ident: 10.1016/j.fsi.2023.108869_bib17
  article-title: High diversity of skin-associated bacterial communities of marine fishes is promoted by their high variability among body parts, individuals and species
  publication-title: FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Ecol.
– volume: 5
  start-page: 737
  issue: 6
  year: 2014
  ident: 10.1016/j.fsi.2023.108869_bib71
  article-title: T lymphocytes control microbial composition by regulating the abundance of Vibrio in the zebrafish gut
  publication-title: Gut Microb.
  doi: 10.4161/19490976.2014.972228
– volume: 122
  start-page: 234
  year: 2022
  ident: 10.1016/j.fsi.2023.108869_bib29
  article-title: Immunomodulation and skin microbiota perturbations during an episode of chronic stress in gilthead seabream
  publication-title: Fish Shellfish Immunol.
  doi: 10.1016/j.fsi.2022.02.011
– volume: 35
  start-page: 53
  issue: 1
  year: 2004
  ident: 10.1016/j.fsi.2023.108869_bib58
  article-title: Modulation of the innate immune response within the periodontium
  publication-title: Periodontol. 2000
  doi: 10.1111/j.0906-6713.2004.003556.x
– volume: 217
  start-page: 639
  issue: 5
  year: 2014
  ident: 10.1016/j.fsi.2023.108869_bib89
  article-title: Gill cell culture systems as models for aquatic environmental monitoring
  publication-title: J. Exp. Biol.
  doi: 10.1242/jeb.095430
– volume: 9
  year: 2018
  ident: 10.1016/j.fsi.2023.108869_bib31
  article-title: The change of teleost skin commensal microbiota is associated with skin mucosal transcriptomic responses during parasitic infection by Ichthyophthirius multifillis
  publication-title: Front. Immunol.
  doi: 10.3389/fimmu.2018.02972
– volume: 237
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib40
  article-title: A review of the toxicity in fish exposed to antibiotics
  publication-title: Comp. Biochem. Physiol. C Toxicol. Pharmacol.
  doi: 10.1016/j.cbpc.2020.108840
– volume: 35
  start-page: 1729
  issue: 6
  year: 2013
  ident: 10.1016/j.fsi.2023.108869_bib52
  article-title: The mucosal immune system of fish: the evolution of tolerating commensals while fighting pathogens
  publication-title: Fish Shellfish Immunol.
  doi: 10.1016/j.fsi.2013.09.032
– volume: 56
  start-page: 105
  issue: 2
  year: 2003
  ident: 10.1016/j.fsi.2023.108869_bib8
  article-title: Bacterial influences on Atlantic halibut Hippoglossus hippoglossus yolk sac larval survival and start feed response
  publication-title: Dis. Aquat. Org.
– year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib4
– volume: 12
  start-page: 2056
  issue: 7
  year: 2016
  ident: 10.1016/j.fsi.2023.108869_bib68
  article-title: Immune relevant molecules identified in the skin mucus of fish using -omics technologies
  publication-title: Mol. Biosyst.
  doi: 10.1039/C5MB00890E
– volume: 2
  start-page: 26
  issue: 1
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib39
  article-title: Antibiotic-induced alterations and repopulation dynamics of yellowtail kingfish microbiota
  publication-title: Animal Microbiome
  doi: 10.1186/s42523-020-00046-4
– volume: 3
  start-page: 355
  issue: 4
  year: 2010
  ident: 10.1016/j.fsi.2023.108869_bib42
  article-title: Host–microbiota interactions within the fish intestinal ecosystem
  publication-title: Mucosal Immunol.
  doi: 10.1038/mi.2010.12
– volume: 78
  start-page: 1798
  issue: 5
  year: 2021
  ident: 10.1016/j.fsi.2023.108869_bib11
  article-title: Insights into the gut and skin microbiome of freshwater fish, smelt (Hypomesus nipponensis)
  publication-title: Curr. Microbiol.
  doi: 10.1007/s00284-021-02440-w
– volume: 31
  start-page: 489
  issue: 4
  year: 2008
  ident: 10.1016/j.fsi.2023.108869_bib57
  article-title: Adhesive properties of environmental Vibrio alginolyticus strains to biotic and abiotic surfaces
  publication-title: New Microbiol.
– volume: 65
  start-page: 446
  issue: 3
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib14
  article-title: Microbiota associated with the skin, gills, and gut of the fish Parachondrostoma toxostoma from the Rhône basin
  publication-title: Freshw. Biol.
  doi: 10.1111/fwb.13437
– volume: 519
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib46
  article-title: The severity of motile Aeromonas septicemia caused by virulent Aeromonas hydrophila in channel catfish is influenced by nutrients and microbes in water
  publication-title: Aquaculture
  doi: 10.1016/j.aquaculture.2019.734898
– volume: 11
  start-page: 1630
  issue: 7
  year: 2017
  ident: 10.1016/j.fsi.2023.108869_bib70
  article-title: The role of adaptive immunity as an ecological filter on the gut microbiota in zebrafish
  publication-title: ISME J.
  doi: 10.1038/ismej.2017.28
– volume: 12
  year: 2021
  ident: 10.1016/j.fsi.2023.108869_bib78
  article-title: Carvacrol, thymol, and garlic essential oil promote skin innate immunity in gilthead seabream (sparus aurata) through the multifactorial modulation of the secretory pathway and enhancement of mucus protective capacity
  publication-title: Front. Immunol.
  doi: 10.3389/fimmu.2021.633621
– volume: 24
  start-page: 2537
  issue: 10
  year: 2015
  ident: 10.1016/j.fsi.2023.108869_bib23
  article-title: Community assembly of a euryhaline fish microbiome during salinity acclimation
  publication-title: Mol. Ecol.
  doi: 10.1111/mec.13177
– volume: 5
  year: 2014
  ident: 10.1016/j.fsi.2023.108869_bib5
  article-title: Teleost microbiomes: the state of the art in their characterization, manipulation and importance in aquaculture and fisheries
  publication-title: Front. Microbiol.
  doi: 10.3389/fmicb.2014.00207
– volume: 85
  start-page: 483
  issue: 3
  year: 2013
  ident: 10.1016/j.fsi.2023.108869_bib21
  article-title: Diversity of the skin microbiota of fishes: evidence for host species specificity
  publication-title: FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Ecol.
  doi: 10.1111/1574-6941.12136
– volume: 11
  start-page: 7518
  issue: 1
  year: 2021
  ident: 10.1016/j.fsi.2023.108869_bib47
  article-title: Skin bacteria of rainbow trout antagonistic to the fish pathogen Flavobacterium psychrophilum
  publication-title: Sci. Rep.
  doi: 10.1038/s41598-021-87167-1
– volume: 22
  start-page: 7804
  issue: 15
  year: 2021
  ident: 10.1016/j.fsi.2023.108869_bib51
  article-title: Skin wound healing rate in fish depends on species and microbiota
  publication-title: Int. J. Mol. Sci.
  doi: 10.3390/ijms22157804
– volume: 8
  year: 2018
  ident: 10.1016/j.fsi.2023.108869_bib65
  article-title: The inner workings of the outer surface: skin and gill microbiota as indicators of changing gut health in yellowtail kingfish
  publication-title: Front. Microbiol.
  doi: 10.3389/fmicb.2017.02664
– volume: 154
  start-page: 184
  year: 2014
  ident: 10.1016/j.fsi.2023.108869_bib87
  article-title: A primary FIsh Gill Cell System (FIGCS) for environmental monitoring of river waters
  publication-title: Aquat. Toxicol.
  doi: 10.1016/j.aquatox.2014.05.019
– volume: 52
  start-page: 145
  issue: 2
  year: 2008
  ident: 10.1016/j.fsi.2023.108869_bib6
  article-title: A review on the interactions between gut microbiota and innate immunity of fish
  publication-title: FEMS Immunol. Med. Microbiol.
  doi: 10.1111/j.1574-695X.2007.00343.x
– volume: 8
  start-page: 14
  issue: 1
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib28
  article-title: Community recovery dynamics in yellow perch microbiome after gradual and constant metallic perturbations
  publication-title: Microbiome
  doi: 10.1186/s40168-020-0789-0
– volume: 11
  start-page: 526
  issue: 2
  year: 2009
  ident: 10.1016/j.fsi.2023.108869_bib80
  article-title: Development of a bacterial challenge test for gnotobiotic sea bass (Dicentrarchus labrax) larvae
  publication-title: Environ. Microbiol.
  doi: 10.1111/j.1462-2920.2008.01794.x
– volume: 8
  start-page: 103
  issue: 1
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib2
  article-title: Microbiome definition re-visited: old concepts and new challenges
  publication-title: Microbiome
  doi: 10.1186/s40168-020-00875-0
– volume: 25
  year: 2022
  ident: 10.1016/j.fsi.2023.108869_bib79
  article-title: The supplementation of a prebiotic improves the microbial community in the gut and the skin of Atlantic salmon (Salmo salar)
  publication-title: Aquaculture Reports
  doi: 10.1016/j.aqrep.2022.101204
– volume: 29
  start-page: 593
  issue: 3
  year: 2011
  ident: 10.1016/j.fsi.2023.108869_bib74
  article-title: Attenuated Francisella asiatica iglC mutant induces protective immunity to francisellosis in tilapia
  publication-title: Vaccine
  doi: 10.1016/j.vaccine.2010.06.040
– volume: 51
  start-page: 422
  issue: 4
  year: 2006
  ident: 10.1016/j.fsi.2023.108869_bib10
  article-title: 16S rDNA-based analysis of dominant bacterial populations associated with early life stages of coho salmon (Oncorhynchus kisutch)
  publication-title: Microb. Ecol.
  doi: 10.1007/s00248-006-9037-9
– volume: 1
  start-page: 3
  year: 1991
  ident: 10.1016/j.fsi.2023.108869_bib30
  article-title: Physiological changes in fish from stress in aquaculture with emphasis on the response and effects of corticosteroids
  publication-title: Annu. Rev. Fish Dis.
  doi: 10.1016/0959-8030(91)90019-G
– volume: 6
  issue: 1
  year: 2016
  ident: 10.1016/j.fsi.2023.108869_bib22
  article-title: Transition from freshwater to seawater reshapes the skin-associated microbiota of Atlantic salmon
  publication-title: Sci. Rep.
  doi: 10.1038/srep19707
– volume: 169
  start-page: 80
  issue: 1
  year: 2014
  ident: 10.1016/j.fsi.2023.108869_bib48
  article-title: Staphylococcus warneri, a resident skin commensal of rainbow trout (Oncorhynchus mykiss) with pathobiont characteristics
  publication-title: Vet. Microbiol.
  doi: 10.1016/j.vetmic.2013.12.012
– volume: 278
  start-page: 14
  issue: 1
  year: 2008
  ident: 10.1016/j.fsi.2023.108869_bib88
  article-title: Development of two cell lines from Epinephelus coioides brain tissue for characterization of betanodavirus and megalocytivirus infectivity and propagation
  publication-title: Aquaculture
  doi: 10.1016/j.aquaculture.2008.03.020
– volume: 16
  start-page: 107
  issue: 3
  year: 2008
  ident: 10.1016/j.fsi.2023.108869_bib49
  article-title: The role of microbiota in infectious disease
  publication-title: Trends Microbiol.
  doi: 10.1016/j.tim.2007.12.008
– volume: 131
  start-page: 1722
  issue: 4
  year: 2021
  ident: 10.1016/j.fsi.2023.108869_bib32
  article-title: Microbial community structure in a host–parasite system: the case of Prussian carp and its parasitic crustaceans
  publication-title: J. Appl. Microbiol.
  doi: 10.1111/jam.15071
– volume: 9
  issue: 1
  year: 2019
  ident: 10.1016/j.fsi.2023.108869_bib44
  article-title: Effects of disease, antibiotic treatment and recovery trajectory on the microbiome of farmed seabass (Dicentrarchus labrax)
  publication-title: Sci. Rep.
  doi: 10.1038/s41598-019-55314-4
– volume: 7
  issue: 1
  year: 2017
  ident: 10.1016/j.fsi.2023.108869_bib69
  article-title: Rainbow trout (Oncorhynchus mykiss) secretory component binds to commensal bacteria and pathogens
  publication-title: Sci. Rep.
  doi: 10.1038/srep41753
– volume: 11
  start-page: 605
  issue: 4
  year: 2019
  ident: 10.1016/j.fsi.2023.108869_bib15
  article-title: Environmental conditions and neutral processes shape the skin microbiome of European catfish (Silurus glanis) populations of Southwestern France
  publication-title: Environmental Microbiology Reports
  doi: 10.1111/1758-2229.12774
– volume: 25
  start-page: 142
  issue: 2
  year: 2013
  ident: 10.1016/j.fsi.2023.108869_bib75
  article-title: Efficacy of spray administration of formalin-killed Streptococcus agalactiae in hybrid red Tilapia
  publication-title: J. Aquat. Anim. Health
  doi: 10.1080/08997659.2013.781553
– volume: 348
  issue: 6237
  year: 2015
  ident: 10.1016/j.fsi.2023.108869_bib3
  article-title: Structure and function of the global ocean microbiome
  publication-title: Science
  doi: 10.1126/science.1261359
– volume: 9
  start-page: 222
  issue: 1
  year: 2021
  ident: 10.1016/j.fsi.2023.108869_bib25
  article-title: Circadian dynamics of the teleost skin immune-microbiome interface
  publication-title: Microbiome
  doi: 10.1186/s40168-021-01160-4
– volume: 9
  start-page: 964
  issue: 5
  year: 2021
  ident: 10.1016/j.fsi.2023.108869_bib34
  article-title: Alteration of the immune response and the microbiota of the skin during a natural infection by Vibrio harveyi in European seabass (Dicentrarchus labrax)
  publication-title: Microorganisms
  doi: 10.3390/microorganisms9050964
– volume: 7
  issue: 4
  year: 2022
  ident: 10.1016/j.fsi.2023.108869_bib35
  article-title: Aeromonas hydrophila induces skin disturbance through mucosal microbiota dysbiosis in striped catfish pangasianodon hypophthalmus
  publication-title: mSphere
  doi: 10.1128/msphere.00194-22
– volume: 2
  issue: 1
  year: 2006
  ident: 10.1016/j.fsi.2023.108869_bib7
  article-title: Robustness trade-offs and host–microbial symbiosis in the immune system
  publication-title: Mol. Syst. Biol.
  doi: 10.1038/msb4100039
– volume: 6
  start-page: 147
  issue: 1
  year: 2018
  ident: 10.1016/j.fsi.2023.108869_bib19
  article-title: Skin microbiome of coral reef fish is highly variable and driven by host phylogeny and diet
  publication-title: Microbiome
  doi: 10.1186/s40168-018-0530-4
– volume: 30
  start-page: 492
  issue: 6
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib50
  article-title: Interaction between microbiota and immunity in health and disease
  publication-title: Cell Res.
  doi: 10.1038/s41422-020-0332-7
– volume: 164
  start-page: 77
  issue: 1
  year: 2013
  ident: 10.1016/j.fsi.2023.108869_bib73
  article-title: Francisella noatunensis subsp. orientalis pathogenesis analyzed by experimental immersion challenge in Nile tilapia, Oreochromis niloticus (L.)
  publication-title: Vet. Microbiol.
  doi: 10.1016/j.vetmic.2013.01.024
– volume: 8
  start-page: 1267
  issue: 9
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib66
  article-title: Investigating both mucosal immunity and microbiota in response to gut enteritis in yellowtail kingfish
  publication-title: Microorganisms
  doi: 10.3390/microorganisms8091267
– volume: 97
  start-page: 83
  year: 2020
  ident: 10.1016/j.fsi.2023.108869_bib76
  article-title: Effects of three host-associated Bacillus species on mucosal immunity and gut health of Nile tilapia, Oreochromis niloticus and its resistance against Aeromonas hydrophila infection
  publication-title: Fish Shellfish Immunol.
  doi: 10.1016/j.fsi.2019.12.046
– volume: 8
  year: 2017
  ident: 10.1016/j.fsi.2023.108869_bib63
  article-title: Under pressure: interactions between commensal microbiota and the teleost immune system
  publication-title: Front. Immunol.
  doi: 10.3389/fimmu.2017.00559
– volume: 150
  start-page: 85
  issue: 1
  year: 2008
  ident: 10.1016/j.fsi.2023.108869_bib67
  article-title: Comparison of antimicrobial activity in the epidermal mucus extracts of fish
  publication-title: Comp. Biochem. Physiol. B Biochem. Mol. Biol.
  doi: 10.1016/j.cbpb.2008.01.011
– volume: 17
  issue: 1
  year: 2021
  ident: 10.1016/j.fsi.2023.108869_bib82
  article-title: Gnotobiotic rainbow trout (Oncorhynchus mykiss) model reveals endogenous bacteria that protect against Flavobacterium columnare infection
  publication-title: PLoS Pathog.
  doi: 10.1371/journal.ppat.1009302
– volume: 155
  start-page: 355
  issue: 2
  year: 2012
  ident: 10.1016/j.fsi.2023.108869_bib43
  article-title: Antagonistic effect of indigenous skin bacteria of brook charr (Salvelinus fontinalis) against Flavobacterium columnare and F. psychrophilum
  publication-title: Vet. Microbiol.
  doi: 10.1016/j.vetmic.2011.09.002
– volume: 38
  start-page: 1245
  issue: 5
  year: 2012
  ident: 10.1016/j.fsi.2023.108869_bib54
  article-title: Comparative analysis of innate immune parameters of the skin mucous secretions from certain freshwater teleosts, inhabiting different ecological niches
  publication-title: Fish Physiol. Biochem.
  doi: 10.1007/s10695-012-9613-5
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Snippet The mucosal microbiome plays a role in regulating host health. The research conducted in humans and mice has governed and detailed the information on...
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SubjectTerms Animals
aquatic environment
Bacterial Infections
digestive tract
environmental factors
fish
Gastrointestinal Tract
Humans
immune system
immunity
Mice
microbiome
Microbiota
Mucous Membrane
Rodent Diseases
shellfish
Skin
Title Teleost skin microbiome: An intimate interplay between the environment and the host immunity
URI https://dx.doi.org/10.1016/j.fsi.2023.108869
https://cir.nii.ac.jp/crid/1870020693313038592
https://www.ncbi.nlm.nih.gov/pubmed/37285875
https://www.proquest.com/docview/2823989492
https://www.proquest.com/docview/2887630838
Volume 139
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