De Novo Transcriptome Sequencing of Codonopsis lanceolata for Identification of Triterpene Synthase and Triterpene Acetyltransferase

• Published in: International journal of molecular sciences Vol. 24; no. 6; p. 5769
• Main Authors: Choi, Han-Bin, Shim, Sangrea, Wang, Myeong-Hyeon, Choi, Yong-Eui
• Format: Journal Article
• Language: English
• Published: Switzerland MDPI AG 17.03.2023; MDPI
• Subjects: 2,3-Oxidosqualene cyclase; Acetates; Acetic acid; Acetyltransferase; Annotations; Biosynthesis; Codonopsis - genetics; Codonopsis - metabolism; Codonopsis lanceolata; Enzymes; Flowers & plants; Gene expression; Genes; Genomes; Homology; Intramolecular Transferases - genetics; Intramolecular Transferases - metabolism; Retention; Roots; Transcriptome - genetics; transcriptome analysis; Transcriptomes; triterpene; Triterpene synthase; Triterpenes; Triterpenes - metabolism; triterpene; transcriptome analysis; 2,3-Oxidosqualene cyclase; Codonopsis lanceolata
• ISSN: 1422-0067; 1661-6596; 1422-0067
• DOI: 10.3390/ijms24065769

(Campanulaceae) is a perennial plant commonly known as the bonnet bellflower. This species is widely used in traditional medicine and is considered to have multiple medicinal properties. In this study, we found that shoots and roots of contained various types of free triterpenes (taraxerol, β-amyrin, α-amyrin, and friedelin) and triterpene acetates (taraxerol acetate, β-amyrin acetate, and α-amyrin acetate). The content of triterpenes and triterpene acetates by GC analysis was higher in the shoot than in the roots. To investigate the transcriptional activity of genes involved in triterpenes and triterpene acetate biosynthesis, we performed de novo transcriptome analysis of shoots and roots of by sequencing using the Illumina platform. A total of 39,523 representative transcripts were obtained. After functional annotation of the transcripts, the differential expression of genes involved in triterpene biosynthetic pathways was investigated. Generally, the transcriptional activity of unigenes in the upstream region (MVA and MEP pathway) of triterpene biosynthetic pathways was higher in shoots than in roots. Various triterpene synthases (2,3-oxidosqualene cyclase, OSC) participate to produce triterpene skeletons by the cyclization of 2,3-oxidosqualene. A total of fifteen contigs were obtained in annotated OSCs in the representative transcripts. Functional characterization of four OSC sequences by heterologous expression in yeast revealed that ClOSC1 was determined as taraxerol synthase, and ClOSC2 was a mixed-amyrin synthase producing α-amyrin and β-amyrin. Five putative contigs of triterpene acetyltransferases showed high homology to the lettuce triterpene acetyltransferases. Conclusively, this study provides the basis of molecular information, particularly for the biosynthesis of triterpenes and triterpene acetates in .