Patterns of Gene Expression in the Frontal Cortex Discriminate Alcoholic from Nonalcoholic Individuals

Alcohol dependence is characterized by tolerance, physical dependence, and craving. The neuroadaptations underlying these effects of chronic alcohol abuse are likely due to altered gene expression. Previous gene expression studies using human post-mortem brain demonstrated that several gene families...

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Published inNeuropsychopharmacology (New York, N.Y.) Vol. 31; no. 7; pp. 1574 - 1582
Main Authors JIANWEN LIU, LEWOHL, Joanne M, HARRIS, R. Adron, LYER, Vishwanath R, DODD, Peter R, RANDALL, Patrick K, MAYFIELD, R. Dayne
Format Journal Article
LanguageEnglish
Published New York, NY Nature Publishing 01.07.2006
Nature Publishing Group
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Abstract Alcohol dependence is characterized by tolerance, physical dependence, and craving. The neuroadaptations underlying these effects of chronic alcohol abuse are likely due to altered gene expression. Previous gene expression studies using human post-mortem brain demonstrated that several gene families were altered by alcohol abuse. However, most of these changes in gene expression were small. It is not clear if gene expression profiles have sufficient power to discriminate control from alcoholic individuals and how consistent gene expression changes are when a relatively large sample size is examined. In the present study, microarray analysis (approximately 47,000 elements) was performed on the superior frontal cortex of 27 individual human cases (14 well characterized alcoholics and 13 matched controls). A partial least squares statistical procedure was applied to identify genes with altered expression levels in alcoholics. We found that genes involved in myelination, ubiquitination, apoptosis, cell adhesion, neurogenesis, and neural disease showed altered expression levels. Importantly, genes involved in neurodegenerative diseases such as Alzheimer's disease were significantly altered suggesting a link between alcoholism and other neurodegenerative conditions. A total of 27 genes identified in this study were previously shown to be changed by alcohol abuse in previous studies of human post-mortem brain. These results revealed a consistent re-programming of gene expression in alcohol abusers that reliably discriminates alcoholic from non-alcoholic individuals.
AbstractList Alcohol dependence is characterized by tolerance, physical dependence, and craving. The neuroadaptations underlying these effects of chronic alcohol abuse are likely due to altered gene expression. Previous gene expression studies using human post-mortem brain demonstrated that several gene families were altered by alcohol abuse. However, most of these changes in gene expression were small. It is not clear if gene expression profiles have sufficient power to discriminate control from alcoholic individuals and how consistent gene expression changes are when a relatively large sample size is examined. In the present study, microarray analysis (approximately 47,000 elements) was performed on the superior frontal cortex of 27 individual human cases (14 well characterized alcoholics and 13 matched controls). A partial least squares statistical procedure was applied to identify genes with altered expression levels in alcoholics. We found that genes involved in myelination, ubiquitination, apoptosis, cell adhesion, neurogenesis, and neural disease showed altered expression levels. Importantly, genes involved in neurodegenerative diseases such as Alzheimer's disease were significantly altered suggesting a link between alcoholism and other neurodegenerative conditions. A total of 27 genes identified in this study were previously shown to be changed by alcohol abuse in previous studies of human post-mortem brain. These results revealed a consistent re-programming of gene expression in alcohol abusers that reliably discriminates alcoholic from non-alcoholic individuals.
Author LEWOHL, Joanne M
HARRIS, R. Adron
RANDALL, Patrick K
DODD, Peter R
JIANWEN LIU
LYER, Vishwanath R
MAYFIELD, R. Dayne
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  surname: JIANWEN LIU
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  fullname: HARRIS, R. Adron
  organization: Waggoner Center for Alcohol and Addiction Research, University of Texas at Austin, Austin, TX, United States
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  givenname: Vishwanath R
  surname: LYER
  fullname: LYER, Vishwanath R
  organization: Section of Molecular Genetics and Microbiology, Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX, United States
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  organization: Charleston Alcohol Research Center, Medical University of South Carolina, Charleston, SC, United States
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  surname: MAYFIELD
  fullname: MAYFIELD, R. Dayne
  organization: Waggoner Center for Alcohol and Addiction Research, University of Texas at Austin, Austin, TX, United States
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IngestDate Thu Oct 10 15:56:23 EDT 2024
Fri Dec 06 02:44:18 EST 2024
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Thu Oct 07 20:41:33 EDT 2021
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Issue 7
Keywords Human
neural disease
Alcoholism
Central nervous system
DNA chip
Frontal cortex
Gene expression
Adhesion
In vitro
Encephalon
human brain
microarray
cell adhesion
Language English
License CC BY 4.0
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PublicationDate 2006-07-01
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PublicationTitle Neuropsychopharmacology (New York, N.Y.)
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PublicationYear 2006
Publisher Nature Publishing
Nature Publishing Group
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Snippet Alcohol dependence is characterized by tolerance, physical dependence, and craving. The neuroadaptations underlying these effects of chronic alcohol abuse are...
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SubjectTerms Addictive behaviors
Adult
Adult and adolescent clinical studies
Aged
Aged, 80 and over
Alcoholism
Alcoholism - metabolism
Alcoholism - pathology
Alcoholism - physiopathology
Alcoholism and acute alcohol poisoning
Biological and medical sciences
Case-Control Studies
Female
Frontal Lobe - physiology
Gene Expression - physiology
Gene Expression Profiling - methods
Gene Expression Regulation - physiology
Humans
Male
Medical sciences
Middle Aged
Oligonucleotide Array Sequence Analysis - methods
Postmortem Changes
Psychology. Psychoanalysis. Psychiatry
Psychopathology. Psychiatry
RNA, Messenger - metabolism
Toxicology
Title Patterns of Gene Expression in the Frontal Cortex Discriminate Alcoholic from Nonalcoholic Individuals
URI http://dx.doi.org/10.1038/sj.npp.1300947
https://www.ncbi.nlm.nih.gov/pubmed/16292326
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Volume 31
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