Machine Learning-Guided Three-Dimensional Printing of Tissue Engineering Scaffolds

Various material compositions have been successfully used in 3D printing with promising applications as scaffolds in tissue engineering. However, identifying suitable printing conditions for new materials requires extensive experimentation in a time and resource-demanding process. This study investi...

Full description

Saved in:
Bibliographic Details
Published inTissue engineering. Part A Vol. 26; no. 23-24; p. 1359
Main Authors Conev, Anja, Litsa, Eleni E, Perez, Marissa R, Diba, Mani, Mikos, Antonios G, Kavraki, Lydia E
Format Journal Article
LanguageEnglish
Published United States 01.12.2020
Subjects
Online AccessGet more information

Cover

Loading…
Abstract Various material compositions have been successfully used in 3D printing with promising applications as scaffolds in tissue engineering. However, identifying suitable printing conditions for new materials requires extensive experimentation in a time and resource-demanding process. This study investigates the use of Machine Learning (ML) for distinguishing between printing configurations that are likely to result in low-quality prints and printing configurations that are more promising as a first step toward the development of a recommendation system for identifying suitable printing conditions. The ML-based framework takes as input the printing conditions regarding the material composition and the printing parameters and predicts the quality of the resulting print as either "low" or "high." We investigate two ML-based approaches: a direct classification-based approach that trains a classifier to distinguish between low- and high-quality prints and an indirect approach that uses a regression ML model that approximates the values of a printing quality metric. Both modes are built upon Random Forests. We trained and evaluated the models on a dataset that was generated in a previous study, which investigated fabrication of porous polymer scaffolds by means of extrusion-based 3D printing with a full-factorial design. Our results show that both models were able to correctly label the majority of the tested configurations while a simpler linear ML model was not effective. Additionally, our analysis showed that a full factorial design for data collection can lead to redundancies in the data, in the context of ML, and we propose a more efficient data collection strategy.
AbstractList Various material compositions have been successfully used in 3D printing with promising applications as scaffolds in tissue engineering. However, identifying suitable printing conditions for new materials requires extensive experimentation in a time and resource-demanding process. This study investigates the use of Machine Learning (ML) for distinguishing between printing configurations that are likely to result in low-quality prints and printing configurations that are more promising as a first step toward the development of a recommendation system for identifying suitable printing conditions. The ML-based framework takes as input the printing conditions regarding the material composition and the printing parameters and predicts the quality of the resulting print as either "low" or "high." We investigate two ML-based approaches: a direct classification-based approach that trains a classifier to distinguish between low- and high-quality prints and an indirect approach that uses a regression ML model that approximates the values of a printing quality metric. Both modes are built upon Random Forests. We trained and evaluated the models on a dataset that was generated in a previous study, which investigated fabrication of porous polymer scaffolds by means of extrusion-based 3D printing with a full-factorial design. Our results show that both models were able to correctly label the majority of the tested configurations while a simpler linear ML model was not effective. Additionally, our analysis showed that a full factorial design for data collection can lead to redundancies in the data, in the context of ML, and we propose a more efficient data collection strategy.
Author Diba, Mani
Perez, Marissa R
Kavraki, Lydia E
Conev, Anja
Litsa, Eleni E
Mikos, Antonios G
Author_xml – sequence: 1
  givenname: Anja
  surname: Conev
  fullname: Conev, Anja
  organization: Department of Computer Science and Rice University, Houston, Texas, USA
– sequence: 2
  givenname: Eleni E
  surname: Litsa
  fullname: Litsa, Eleni E
  organization: Department of Computer Science and Rice University, Houston, Texas, USA
– sequence: 3
  givenname: Marissa R
  surname: Perez
  fullname: Perez, Marissa R
  organization: NIH/NIBIB Center for Engineering Complex Tissues, USA
– sequence: 4
  givenname: Mani
  surname: Diba
  fullname: Diba, Mani
  organization: NIH/NIBIB Center for Engineering Complex Tissues, USA
– sequence: 5
  givenname: Antonios G
  surname: Mikos
  fullname: Mikos, Antonios G
  organization: NIH/NIBIB Center for Engineering Complex Tissues, USA
– sequence: 6
  givenname: Lydia E
  surname: Kavraki
  fullname: Kavraki, Lydia E
  organization: Department of Computer Science and Rice University, Houston, Texas, USA
BackLink https://www.ncbi.nlm.nih.gov/pubmed/32940144$$D View this record in MEDLINE/PubMed
BookMark eNo1j8tKw0AYhQdR7EUfwI3kBRL_uWeWUmsVIopGcFcmmT_tSDIpmWTh21tRVwcO3_ngLMhp6AMSckUho5CbmxFDNqLNGDDIgBp6QubUcJ1yLj9mZBHjJ4ACpfU5mXFmBFAh5uT1ydZ7HzAp0A7Bh126mbxDl5T7ATG98x2G6Ptg2-Rl8GE8EknfJKWPccJkHXbHLQ4_7Vttm6ZvXbwgZ41tI17-5ZK836_L1UNaPG8eV7dFWgstx9RIhpo76QTkoqaaU6SaUkADSuWVEzXIWhhqIHfKcuW4qJyWUMncMKEMW5LrX-9hqjp028PgOzt8bf_PsW-UDFFT
CitedBy_id crossref_primary_10_1088_1758_5090_ad2189
crossref_primary_10_1002_btm2_10437
crossref_primary_10_1007_s42600_022_00257_5
crossref_primary_10_3390_jfb13020040
crossref_primary_10_1016_j_hybadv_2024_100242
crossref_primary_10_1016_j_ijpharm_2023_123652
crossref_primary_10_3390_mi13030363
crossref_primary_10_1016_j_matpr_2022_08_485
crossref_primary_10_1007_s00521_022_07694_4
crossref_primary_10_1016_j_foodres_2023_113384
crossref_primary_10_1002_anbr_202100075
crossref_primary_10_1063_5_0082179
crossref_primary_10_3390_ma14185278
crossref_primary_10_3389_fbiom_2024_1358508
crossref_primary_10_1088_2057_1976_acf581
crossref_primary_10_1002_advs_202202638
crossref_primary_10_1016_j_eng_2021_05_014
crossref_primary_10_3390_biomimetics8070546
crossref_primary_10_3390_bioengineering9100561
crossref_primary_10_3390_bioengineering11050415
crossref_primary_10_1038_s41467_023_40459_8
crossref_primary_10_1016_j_eurpolymj_2023_112095
crossref_primary_10_3389_fbioe_2022_985688
crossref_primary_10_3390_ma17020374
crossref_primary_10_3390_mi12070780
crossref_primary_10_61186_shefa_11_4_94
crossref_primary_10_1007_s11831_024_10100_y
crossref_primary_10_1002_admt_202301286
crossref_primary_10_1021_acsomega_2c00335
crossref_primary_10_1088_2053_1591_ad419a
crossref_primary_10_1063_5_0047818
crossref_primary_10_1093_rb_rbae033
crossref_primary_10_1002_adma_202104730
crossref_primary_10_3390_s22207757
crossref_primary_10_1007_s10845_023_02141_0
crossref_primary_10_1021_acsbiomaterials_3c01368
crossref_primary_10_3390_ma14123149
crossref_primary_10_1007_s11665_021_06042_2
crossref_primary_10_1021_acs_biomac_3c01271
crossref_primary_10_3389_fmats_2023_1337485
crossref_primary_10_1007_s44174_024_00177_1
crossref_primary_10_54393_pbmj_v5i6_494
crossref_primary_10_1016_j_drudis_2023_103823
crossref_primary_10_1038_s43586_021_00073_8
crossref_primary_10_1089_ten_tea_2022_0128
crossref_primary_10_1089_ten_tea_2022_0122
crossref_primary_10_1016_j_bprint_2021_e00156
crossref_primary_10_1016_j_mtcomm_2024_109777
crossref_primary_10_3390_ma14174896
crossref_primary_10_1016_j_tibtech_2024_01_004
crossref_primary_10_3390_jfb15030060
crossref_primary_10_1016_j_stlm_2023_100132
ContentType Journal Article
DBID CGR
CUY
CVF
ECM
EIF
NPM
DOI 10.1089/ten.tea.2020.0191
DatabaseName Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
DatabaseTitle MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
DatabaseTitleList MEDLINE
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
DeliveryMethod no_fulltext_linktorsrc
Discipline Engineering
EISSN 1937-335X
ExternalDocumentID 32940144
Genre Research Support, Non-U.S. Gov't
Journal Article
Research Support, N.I.H., Extramural
GroupedDBID ---
0R~
1-M
123
29Q
3V.
4.4
53G
7X7
88A
88E
88I
8FE
8FH
8FI
8FJ
ABBKN
ABUWG
ACGFO
ACGOD
ACPRK
AENEX
AFKRA
AHMBA
ALIPV
ALMA_UNASSIGNED_HOLDINGS
AZQEC
BBNVY
BENPR
BHPHI
BPHCQ
BVXVI
CAG
CCPQU
CGR
COF
CS3
CUY
CVF
DU5
DWQXO
EBS
ECM
EIF
EJD
F5P
FYUFA
GNUQQ
HCIFZ
HMCUK
IAO
IER
IGS
IHR
ITC
LK8
M0L
M1P
M2P
M7P
MV1
NPM
NQHIM
O9-
PQQKQ
PROAC
PSQYO
RML
RNS
UE5
UKHRP
ID FETCH-LOGICAL-c475t-952e73d5d4084c1731e17110e90668bd4c05c491908d6a36d34bd750b58924692
IngestDate Fri Oct 18 09:20:25 EDT 2024
IsDoiOpenAccess false
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 23-24
Keywords random forests
tissue engineering
biomaterials
machine learning
printing quality prediction
3D printing
Language English
LinkModel OpenURL
MergedId FETCHMERGED-LOGICAL-c475t-952e73d5d4084c1731e17110e90668bd4c05c491908d6a36d34bd750b58924692
OpenAccessLink https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7759288
PMID 32940144
ParticipantIDs pubmed_primary_32940144
PublicationCentury 2000
PublicationDate 2020-12-00
PublicationDateYYYYMMDD 2020-12-01
PublicationDate_xml – month: 12
  year: 2020
  text: 2020-12-00
PublicationDecade 2020
PublicationPlace United States
PublicationPlace_xml – name: United States
PublicationTitle Tissue engineering. Part A
PublicationTitleAlternate Tissue Eng Part A
PublicationYear 2020
SSID ssj0060677
Score 2.5474951
Snippet Various material compositions have been successfully used in 3D printing with promising applications as scaffolds in tissue engineering. However, identifying...
SourceID pubmed
SourceType Index Database
StartPage 1359
SubjectTerms Machine Learning
Porosity
Printing, Three-Dimensional
Tissue Engineering
Tissue Scaffolds
Title Machine Learning-Guided Three-Dimensional Printing of Tissue Engineering Scaffolds
URI https://www.ncbi.nlm.nih.gov/pubmed/32940144
Volume 26
hasFullText
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV3PT9swFLbKJiE4TBswYGyTD7shh8a_Yh8nfmpaEUJF6g0lsTMFbSkq4cJfz3OcNFYLAnaJqthNI3_vvXx-fe8LQj-odLI2UhKumSCcC0qA5RuSAplImKEpz1wecnQuz674r4mYDAYPYXdJnUX5w5N9Jf-DKpwDXF2X7BuQnV8UTsBnwBeOgDAcX4XxqKmEtJ1I6h9yel8aYJBjAMiSIyfc70U39i9mZdUVOI-btQ6VCMHD06KY_vVNvx1XbefZfl4EhHNW9-nPw2kFt9yURd7Mw_vvsr5LfcWYrcq-0-HCzny2euTee3iX9qWKR2WW-oGqDLMQNKzosD5yAs8hjIlJGFp9M3xrQpQRyoNYGTOvBb4UxIfKaaDCliECO4_cr0VARONwLuBw-69BlVHN3a7w5dEFXe1uaAWtJMrFxnOX5_HPcOl09br_wJU-WLqXNbTafX9hP9LwkvFH9KHdUOCf3jo-oYGtNtB6AO4mumztBC_YCV6yE9zZCZ4W2OOPg0vhuZ1soauT4_HhGWnfpUFynoiaaEEt-J4wfKh4HicstnEC1M9qcFSVGZ4PRc410ENlZMqkYTwzwCYzocB3paaf0bsKjGoH4aSwccElV3lieW6M0iLVxsJD39HvodlF235Brm-9YMp1t1Rfnh3ZQ2u9VX1F7wvwUPsN6F6dfW-QeQREzVIb
link.rule.ids 786
linkProvider National Library of Medicine
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Machine+Learning-Guided+Three-Dimensional+Printing+of+Tissue+Engineering+Scaffolds&rft.jtitle=Tissue+engineering.+Part+A&rft.au=Conev%2C+Anja&rft.au=Litsa%2C+Eleni+E&rft.au=Perez%2C+Marissa+R&rft.au=Diba%2C+Mani&rft.date=2020-12-01&rft.eissn=1937-335X&rft.volume=26&rft.issue=23-24&rft.spage=1359&rft_id=info:doi/10.1089%2Ften.tea.2020.0191&rft_id=info%3Apmid%2F32940144&rft_id=info%3Apmid%2F32940144&rft.externalDocID=32940144