Gut microbiota and sepsis and sepsis-related death: a Mendelian randomization investigation

It is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a causal link exists between the two. This study used publicly available genome-wide association studies (GWAS) summary data of gut microbiota...

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Published inFrontiers in immunology Vol. 15; p. 1266230
Main Authors Shang, Weifeng, Zhang, Sheng, Qian, Hang, Huang, Sisi, Li, Hui, Liu, Jiao, Chen, Dechang
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Published Switzerland Frontiers Media S.A 2024
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Abstract It is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a causal link exists between the two. This study used publicly available genome-wide association studies (GWAS) summary data of gut microbiota, sepsis, sepsis (critical care), and sepsis (28-day death in critical care) to perform a two-sample MR analysis. To ensure the robustness of the results, we also conducted a sensitivity analysis. For sepsis susceptibility, inverse variance weighted (IVW) estimates revealed that (OR = 0.86, 95% CI, 0.78-0.94, = 0.0017) was protective against sepsis, while (OR = 0.89, 95% CI, 0.80-0.99), (OR = 1.37, 95% CI, 1.08-1.73), (OR = 1.21, 95% CI, 1.04-1.40), (OR = 1.10, 95% CI, 1.01-1.20), (OR = 0.85, 95% CI, 0.74-0.97), and (OR = 0.81, 95% CI, 0.69-0.94) presented a suggestive association with the development of sepsis (all < 0.05). For sepsis (critical care), IVW estimates indicated that (OR = 0.70, 95% CI, 0.53-0.93), (OR = 0.67, 95% CI, 0.50-0.91), (OR = 0.49, 95% CI, 0.31-0.76), (OR = 0.51, 95% CI, 0.34-0.77), and (OR = 0.66, 95% CI, 0.44-0.99) showed a suggestive negative correlation with sepsis (critical care) (all < 0.05). For sepsis (28-day death in critical care), IVW estimates suggested that four bacterial taxa had a normally significant negative correlation with the risk of sepsis-related death, including (OR = 0.54, 95% CI, 0.30-0.95), (OR = 0.34, 95% CI, 0.14-0.83), (OR = 0.43, 95% CI, 0.22-0.83), and (OR = 0.45, 95% CI, 0.21-0.97), while two bacterial taxa were normally significantly positively linked to the risk of sepsis-related death, namely, (OR = 2.03, 95% CI, 1.01-4.08) and (OR = 2.65, 95% CI, 1.18-5.96) (all < 0.05). The robustness of the above correlations was verified by additional sensitivity analyses. This MR research found that several gut microbiota taxa were causally linked to the risk of sepsis, sepsis in critical care, and sepsis-related 28-day mortality in critical care.
AbstractList BackgroundIt is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a causal link exists between the two.MethodsThis study used publicly available genome-wide association studies (GWAS) summary data of gut microbiota, sepsis, sepsis (critical care), and sepsis (28-day death in critical care) to perform a two-sample MR analysis. To ensure the robustness of the results, we also conducted a sensitivity analysis.ResultsFor sepsis susceptibility, inverse variance weighted (IVW) estimates revealed that Victivallales (OR = 0.86, 95% CI, 0.78–0.94, p = 0.0017) was protective against sepsis, while Lentisphaerae (OR = 0.89, 95% CI, 0.80–0.99), Gammaproteobacteria (OR = 1.37, 95% CI, 1.08–1.73), Clostridiaceae1 (OR = 1.21, 95% CI, 1.04–1.40), RuminococcaceaeUCG011 (OR = 1.10, 95% CI, 1.01–1.20), Dialister (OR = 0.85, 95% CI, 0.74–0.97), and Coprococcus2 (OR = 0.81, 95% CI, 0.69–0.94) presented a suggestive association with the development of sepsis (all p < 0.05). For sepsis (critical care), IVW estimates indicated that Lentisphaerae (OR = 0.70, 95% CI, 0.53–0.93), Victivallales (OR = 0.67, 95% CI, 0.50–0.91), Anaerostipes (OR = 0.49, 95% CI, 0.31–0.76), LachnospiraceaeUCG004 (OR = 0.51, 95% CI, 0.34–0.77), and Coprococcus1 (OR = 0.66, 95% CI, 0.44–0.99) showed a suggestive negative correlation with sepsis (critical care) (all p < 0.05). For sepsis (28-day death in critical care), IVW estimates suggested that four bacterial taxa had a normally significant negative correlation with the risk of sepsis-related death, including Victivallales (OR = 0.54, 95% CI, 0.30–0.95), Coprococcus2 (OR = 0.34, 95% CI, 0.14–0.83), Ruminiclostridium6 (OR = 0.43, 95% CI, 0.22–0.83), and Coprococcus1 (OR = 0.45, 95% CI, 0.21–0.97), while two bacterial taxa were normally significantly positively linked to the risk of sepsis-related death, namely, Mollicutes (OR = 2.03, 95% CI, 1.01–4.08) and Bacteroidales (OR = 2.65, 95% CI, 1.18–5.96) (all p < 0.05). The robustness of the above correlations was verified by additional sensitivity analyses.ConclusionThis MR research found that several gut microbiota taxa were causally linked to the risk of sepsis, sepsis in critical care, and sepsis-related 28-day mortality in critical care.
It is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a causal link exists between the two. This study used publicly available genome-wide association studies (GWAS) summary data of gut microbiota, sepsis, sepsis (critical care), and sepsis (28-day death in critical care) to perform a two-sample MR analysis. To ensure the robustness of the results, we also conducted a sensitivity analysis. For sepsis susceptibility, inverse variance weighted (IVW) estimates revealed that (OR = 0.86, 95% CI, 0.78-0.94, = 0.0017) was protective against sepsis, while (OR = 0.89, 95% CI, 0.80-0.99), (OR = 1.37, 95% CI, 1.08-1.73), (OR = 1.21, 95% CI, 1.04-1.40), (OR = 1.10, 95% CI, 1.01-1.20), (OR = 0.85, 95% CI, 0.74-0.97), and (OR = 0.81, 95% CI, 0.69-0.94) presented a suggestive association with the development of sepsis (all < 0.05). For sepsis (critical care), IVW estimates indicated that (OR = 0.70, 95% CI, 0.53-0.93), (OR = 0.67, 95% CI, 0.50-0.91), (OR = 0.49, 95% CI, 0.31-0.76), (OR = 0.51, 95% CI, 0.34-0.77), and (OR = 0.66, 95% CI, 0.44-0.99) showed a suggestive negative correlation with sepsis (critical care) (all < 0.05). For sepsis (28-day death in critical care), IVW estimates suggested that four bacterial taxa had a normally significant negative correlation with the risk of sepsis-related death, including (OR = 0.54, 95% CI, 0.30-0.95), (OR = 0.34, 95% CI, 0.14-0.83), (OR = 0.43, 95% CI, 0.22-0.83), and (OR = 0.45, 95% CI, 0.21-0.97), while two bacterial taxa were normally significantly positively linked to the risk of sepsis-related death, namely, (OR = 2.03, 95% CI, 1.01-4.08) and (OR = 2.65, 95% CI, 1.18-5.96) (all < 0.05). The robustness of the above correlations was verified by additional sensitivity analyses. This MR research found that several gut microbiota taxa were causally linked to the risk of sepsis, sepsis in critical care, and sepsis-related 28-day mortality in critical care.
It is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a causal link exists between the two.BackgroundIt is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a causal link exists between the two.This study used publicly available genome-wide association studies (GWAS) summary data of gut microbiota, sepsis, sepsis (critical care), and sepsis (28-day death in critical care) to perform a two-sample MR analysis. To ensure the robustness of the results, we also conducted a sensitivity analysis.MethodsThis study used publicly available genome-wide association studies (GWAS) summary data of gut microbiota, sepsis, sepsis (critical care), and sepsis (28-day death in critical care) to perform a two-sample MR analysis. To ensure the robustness of the results, we also conducted a sensitivity analysis.For sepsis susceptibility, inverse variance weighted (IVW) estimates revealed that Victivallales (OR = 0.86, 95% CI, 0.78-0.94, p = 0.0017) was protective against sepsis, while Lentisphaerae (OR = 0.89, 95% CI, 0.80-0.99), Gammaproteobacteria (OR = 1.37, 95% CI, 1.08-1.73), Clostridiaceae1 (OR = 1.21, 95% CI, 1.04-1.40), RuminococcaceaeUCG011 (OR = 1.10, 95% CI, 1.01-1.20), Dialister (OR = 0.85, 95% CI, 0.74-0.97), and Coprococcus2 (OR = 0.81, 95% CI, 0.69-0.94) presented a suggestive association with the development of sepsis (all p < 0.05). For sepsis (critical care), IVW estimates indicated that Lentisphaerae (OR = 0.70, 95% CI, 0.53-0.93), Victivallales (OR = 0.67, 95% CI, 0.50-0.91), Anaerostipes (OR = 0.49, 95% CI, 0.31-0.76), LachnospiraceaeUCG004 (OR = 0.51, 95% CI, 0.34-0.77), and Coprococcus1 (OR = 0.66, 95% CI, 0.44-0.99) showed a suggestive negative correlation with sepsis (critical care) (all p < 0.05). For sepsis (28-day death in critical care), IVW estimates suggested that four bacterial taxa had a normally significant negative correlation with the risk of sepsis-related death, including Victivallales (OR = 0.54, 95% CI, 0.30-0.95), Coprococcus2 (OR = 0.34, 95% CI, 0.14-0.83), Ruminiclostridium6 (OR = 0.43, 95% CI, 0.22-0.83), and Coprococcus1 (OR = 0.45, 95% CI, 0.21-0.97), while two bacterial taxa were normally significantly positively linked to the risk of sepsis-related death, namely, Mollicutes (OR = 2.03, 95% CI, 1.01-4.08) and Bacteroidales (OR = 2.65, 95% CI, 1.18-5.96) (all p < 0.05). The robustness of the above correlations was verified by additional sensitivity analyses.ResultsFor sepsis susceptibility, inverse variance weighted (IVW) estimates revealed that Victivallales (OR = 0.86, 95% CI, 0.78-0.94, p = 0.0017) was protective against sepsis, while Lentisphaerae (OR = 0.89, 95% CI, 0.80-0.99), Gammaproteobacteria (OR = 1.37, 95% CI, 1.08-1.73), Clostridiaceae1 (OR = 1.21, 95% CI, 1.04-1.40), RuminococcaceaeUCG011 (OR = 1.10, 95% CI, 1.01-1.20), Dialister (OR = 0.85, 95% CI, 0.74-0.97), and Coprococcus2 (OR = 0.81, 95% CI, 0.69-0.94) presented a suggestive association with the development of sepsis (all p < 0.05). For sepsis (critical care), IVW estimates indicated that Lentisphaerae (OR = 0.70, 95% CI, 0.53-0.93), Victivallales (OR = 0.67, 95% CI, 0.50-0.91), Anaerostipes (OR = 0.49, 95% CI, 0.31-0.76), LachnospiraceaeUCG004 (OR = 0.51, 95% CI, 0.34-0.77), and Coprococcus1 (OR = 0.66, 95% CI, 0.44-0.99) showed a suggestive negative correlation with sepsis (critical care) (all p < 0.05). For sepsis (28-day death in critical care), IVW estimates suggested that four bacterial taxa had a normally significant negative correlation with the risk of sepsis-related death, including Victivallales (OR = 0.54, 95% CI, 0.30-0.95), Coprococcus2 (OR = 0.34, 95% CI, 0.14-0.83), Ruminiclostridium6 (OR = 0.43, 95% CI, 0.22-0.83), and Coprococcus1 (OR = 0.45, 95% CI, 0.21-0.97), while two bacterial taxa were normally significantly positively linked to the risk of sepsis-related death, namely, Mollicutes (OR = 2.03, 95% CI, 1.01-4.08) and Bacteroidales (OR = 2.65, 95% CI, 1.18-5.96) (all p < 0.05). The robustness of the above correlations was verified by additional sensitivity analyses.This MR research found that several gut microbiota taxa were causally linked to the risk of sepsis, sepsis in critical care, and sepsis-related 28-day mortality in critical care.ConclusionThis MR research found that several gut microbiota taxa were causally linked to the risk of sepsis, sepsis in critical care, and sepsis-related 28-day mortality in critical care.
Author Shang, Weifeng
Qian, Hang
Zhang, Sheng
Li, Hui
Liu, Jiao
Huang, Sisi
Chen, Dechang
AuthorAffiliation Department of Critical Care Medicine, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine , Shanghai , China
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Cites_doi 10.1186/s13054-023-04412-x
10.3389/fmicb.2021.737197
10.1093/ije/dyv080
10.1016/j.cell.2017.11.024
10.3389/fped.2021.645060
10.1093/aje/kwt084
10.1371/journal.pmed.1004174
10.1080/14767058.2020.1774870
10.1097/ccm.0000000000002291
10.1002/gepi.21965
10.1128/mBio.01361-14
10.1038/s41588-020-00763-1
10.1038/nature12721
10.1093/ije/dyq151
10.1007/s00134-021-06506-y
10.1038/s41588-018-0099-7
10.1016/j.jinf.2022.04.035
10.1111/imr.12563
10.1093/cid/ciy882
10.1186/s13054-020-02989-1
10.1038/s41591-021-01371-0
10.3389/fimmu.2018.02042
10.1136/bmj.n2233
10.1038/s41586-018-0579-z
10.1038/nm.2729
10.1164/rccm.201503-0483OC
10.1136/gutjnl-2015-309728
10.1093/ije/dyv071
10.1038/nmicrobiol.2016.113
10.1371/journal.pgen.1007081
10.1186/s13049-019-0596-4
10.1002/oby.20468
10.1097/shk.0000000000000896
10.1096/fj.201900398RR
10.1159/000443360
10.21037/tp-21-51
10.12659/msm.911768
10.1097/mcc.0000000000001019
10.3389/fimmu.2018.02079
10.3389/fimmu.2023.1234924
10.1093/femspd/ftac027
10.3389/fimmu.2019.00277
10.1002/ams2.770
10.1097/shk.0000000000001098
10.1007/s10096-011-1337-4
10.1093/ije/dyg070
10.1111/j.1462-2920.2004.00614.x
10.3389/fmicb.2023.1167416
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Keywords sepsis-related death
Mendelian randomization
gut microbiota
sepsis
causality
Language English
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Reviewed by: Flavia Silva, Rio de Janeiro State University, Brazil
Edited by: Louisy Santos, Rio de Janeiro State University, Brazil
These authors have contributed equally to this work
Georgia Damoraki, National and Kapodistrian University of Athens, Greece
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References Bowden (B26) 2016; 40
Dornelles (B39) 2022; 35
Haak (B49) 2018; 9
Costa (B3) 2022; 80
Schuijt (B44) 2016; 65
Chen (B15) 2023; 14
Pierce (B24) 2013; 178
Chen (B13) 2018; 9
Morowitz (B46) 2017; 45
Bycroft (B19) 2018; 562
Verbanck (B27) 2018; 50
Panpetch (B12) 2018; 49
Ni (B22) 2021; 12
Du (B9) 2021; 10
Biemond (B48) 2023; 29
Liu (B8) 2021; 9
Kurilshikov (B18) 2021; 53
Wang (B29) 2013; 21
Parada Venegas (B38) 2019; 10
Skrivankova (B32) 2021; 375
Prescott (B7) 2015; 192
Wan (B10) 2018; 24
Smith (B14) 2003; 32
Boef (B17) 2015; 44
Ayres (B42) 2012; 18
Lange (B4) 2016; 34
Bowden (B25) 2015; 44
Sompolinsky (B36) 1971; 7
Zhang (B16) 2023; 14
Hamilton (B21) 2023; 20
Graspeuntner (B43) 2019; 69
Pierce (B23) 2011; 40
Adelman (B47) 2020; 24
Kim (B34) 2017; 279
Liu (B5) 2019; 33
Kundu (B41) 2017; 171
Zekavat (B20) 2021; 27
Cho (B40) 2004; 6
Zaborin (B6) 2014; 5
Evans (B1) 2021; 47
Furusawa (B37) 2013; 504
Minasyan (B2) 2019; 27
Ikeda (B45) 2018; 50
Hemani (B31) 2017; 13
Dickson (B33) 2016; 1
Koh (B30) 2012; 31
Thompson (B28) 2022; 84
Sun (B11) 2023; 27
Muratsu (B35) 2022; 9
References_xml – volume: 27
  start-page: 127
  year: 2023
  ident: B11
  article-title: Altered intestinal microbiome and metabolome correspond to the clinical outcome of sepsis
  publication-title: Crit Care
  doi: 10.1186/s13054-023-04412-x
– volume: 12
  year: 2021
  ident: B22
  article-title: Gut microbiota and psychiatric disorders: A two-sample mendelian randomization study
  publication-title: Front Microbiol
  doi: 10.3389/fmicb.2021.737197
– volume: 44
  year: 2015
  ident: B25
  article-title: Mendelian randomization with invalid instruments: effect estimation and bias detection through Egger regression
  publication-title: Int J Epidemiol
  doi: 10.1093/ije/dyv080
– volume: 171
  year: 2017
  ident: B41
  article-title: Our gut microbiome: the evolving inner self
  publication-title: Cell
  doi: 10.1016/j.cell.2017.11.024
– volume: 9
  year: 2021
  ident: B8
  article-title: Altered gut microbiota taxonomic compositions of patients with sepsis in a pediatric intensive care unit
  publication-title: Front Pediatr
  doi: 10.3389/fped.2021.645060
– volume: 178
  year: 2013
  ident: B24
  article-title: Efficient design for Mendelian randomization studies: subsample and 2-sample instrumental variable estimators
  publication-title: Am J Epidemiol
  doi: 10.1093/aje/kwt084
– volume: 20
  year: 2023
  ident: B21
  article-title: Therapeutic potential of IL6R blockade for the treatment of sepsis and sepsis-related death: A Mendelian randomisation study
  publication-title: PloS Med
  doi: 10.1371/journal.pmed.1004174
– volume: 35
  year: 2022
  ident: B39
  article-title: Meconium microbiota predicts clinical early-onset neonatal sepsis in preterm neonates
  publication-title: J Matern Fetal Neonatal Med
  doi: 10.1080/14767058.2020.1774870
– volume: 45
  year: 2017
  ident: B46
  article-title: Dietary supplementation with nonfermentable fiber alters the gut microbiota and confers protection in murine models of sepsis
  publication-title: Crit Care Med
  doi: 10.1097/ccm.0000000000002291
– volume: 40
  year: 2016
  ident: B26
  article-title: Consistent estimation in mendelian randomization with some invalid instruments using a weighted median estimator
  publication-title: Genet Epidemiol
  doi: 10.1002/gepi.21965
– volume: 5
  year: 2014
  ident: B6
  article-title: Membership and behavior of ultra-low-diversity pathogen communities present in the gut of humans during prolonged critical illness
  publication-title: mBio
  doi: 10.1128/mBio.01361-14
– volume: 53
  year: 2021
  ident: B18
  article-title: Large-scale association analyses identify host factors influencing human gut microbiome composition
  publication-title: Nat Genet
  doi: 10.1038/s41588-020-00763-1
– volume: 504
  year: 2013
  ident: B37
  article-title: Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells
  publication-title: Nature
  doi: 10.1038/nature12721
– volume: 40
  year: 2011
  ident: B23
  article-title: Power and instrument strength requirements for Mendelian randomization studies using multiple genetic variants
  publication-title: Int J Epidemiol
  doi: 10.1093/ije/dyq151
– volume: 47
  year: 2021
  ident: B1
  article-title: Surviving sepsis campaign: international guidelines for management of sepsis and septic shock 2021
  publication-title: Intensive Care Med
  doi: 10.1007/s00134-021-06506-y
– volume: 50
  year: 2018
  ident: B27
  article-title: Detection of widespread horizontal pleiotropy in causal relationships inferred from Mendelian randomization between complex traits and diseases
  publication-title: Nat Genet
  doi: 10.1038/s41588-018-0099-7
– volume: 7
  year: 1971
  ident: B36
  article-title: Puerperal sepsis due to T-strain Mycoplasma
  publication-title: Isr J Med Sci
– volume: 84
  year: 2022
  ident: B28
  article-title: Sex differences in sepsis hospitalisations and outcomes in older women and men: A prospective cohort study
  publication-title: J Infect
  doi: 10.1016/j.jinf.2022.04.035
– volume: 279
  start-page: 90
  year: 2017
  ident: B34
  article-title: The intestinal microbiota: Antibiotics, colonization resistance, and enteric pathogens
  publication-title: Immunol Rev
  doi: 10.1111/imr.12563
– volume: 69
  year: 2019
  ident: B43
  article-title: Gut dysbiosis with bacilli dominance and accumulation of fermentation products precedes late-onset sepsis in preterm infants
  publication-title: Clin Infect Dis
  doi: 10.1093/cid/ciy882
– volume: 24
  start-page: 278
  year: 2020
  ident: B47
  article-title: The gut microbiome's role in the development, maintenance, and outcomes of sepsis
  publication-title: Crit Care
  doi: 10.1186/s13054-020-02989-1
– volume: 27
  year: 2021
  ident: B20
  article-title: Hematopoietic mosaic chromosomal alterations increase the risk for diverse types of infection
  publication-title: Nat Med
  doi: 10.1038/s41591-021-01371-0
– volume: 9
  year: 2018
  ident: B49
  article-title: Therapeutic potential of the gut microbiota in the prevention and treatment of sepsis
  publication-title: Front Immunol
  doi: 10.3389/fimmu.2018.02042
– volume: 375
  year: 2021
  ident: B32
  article-title: Strengthening the reporting of observational studies in epidemiology using mendelian randomisation (STROBE-MR): explanation and elaboration
  publication-title: Bmj
  doi: 10.1136/bmj.n2233
– volume: 562
  year: 2018
  ident: B19
  article-title: The UK Biobank resource with deep phenotyping and genomic data
  publication-title: Nature
  doi: 10.1038/s41586-018-0579-z
– volume: 18
  start-page: 799
  year: 2012
  ident: B42
  article-title: Lethal inflammasome activation by a multidrug-resistant pathobiont upon antibiotic disruption of the microbiota
  publication-title: Nat Med
  doi: 10.1038/nm.2729
– volume: 192
  year: 2015
  ident: B7
  article-title: Hospitalization type and subsequent severe sepsis
  publication-title: Am J Respir Crit Care Med
  doi: 10.1164/rccm.201503-0483OC
– volume: 65
  year: 2016
  ident: B44
  article-title: The gut microbiota plays a protective role in the host defence against pneumococcal pneumonia
  publication-title: Gut
  doi: 10.1136/gutjnl-2015-309728
– volume: 44
  start-page: 496
  year: 2015
  ident: B17
  article-title: Mendelian randomization studies: a review of the approaches used and the quality of reporting
  publication-title: Int J Epidemiol
  doi: 10.1093/ije/dyv071
– volume: 1
  start-page: 16113
  year: 2016
  ident: B33
  article-title: Enrichment of the lung microbiome with gut bacteria in sepsis and the acute respiratory distress syndrome
  publication-title: Nat Microbiol
  doi: 10.1038/nmicrobiol.2016.113
– volume: 13
  year: 2017
  ident: B31
  article-title: Orienting the causal relationship between imprecisely measured traits using GWAS summary data
  publication-title: PloS Genet
  doi: 10.1371/journal.pgen.1007081
– volume: 27
  year: 2019
  ident: B2
  article-title: Sepsis: mechanisms of bacterial injury to the patient
  publication-title: Scand J Trauma Resusc Emerg Med
  doi: 10.1186/s13049-019-0596-4
– volume: 21
  year: 2013
  ident: B29
  article-title: Obesity and risk of sepsis: a population-based cohort study
  publication-title: Obes (Silver Spring)
  doi: 10.1002/oby.20468
– volume: 49
  start-page: 62
  year: 2018
  ident: B12
  article-title: Gastrointestinal colonization of candida albicans increases serum (1→3)-β-D-glucan, without candidemia, and worsens cecal ligation and puncture sepsis in murine model
  publication-title: Shock
  doi: 10.1097/shk.0000000000000896
– volume: 33
  year: 2019
  ident: B5
  article-title: Enteric dysbiosis is associated with sepsis in patients
  publication-title: FASEB J
  doi: 10.1096/fj.201900398RR
– volume: 34
  year: 2016
  ident: B4
  article-title: Effects of antibiotics on gut microbiota
  publication-title: Dig Dis
  doi: 10.1159/000443360
– volume: 10
  year: 2021
  ident: B9
  article-title: Analysis of gut microbiota alteration and application as an auxiliary prognostic marker for sepsis in children: a pilot study
  publication-title: Transl Pediatr
  doi: 10.21037/tp-21-51
– volume: 24
  year: 2018
  ident: B10
  article-title: Gut microbiota disruption in septic shock patients: A pilot study
  publication-title: Med Sci Monit
  doi: 10.12659/msm.911768
– volume: 29
  year: 2023
  ident: B48
  article-title: Leveraging the microbiome in the treatment of sepsis: potential pitfalls and new perspectives
  publication-title: Curr Opin Crit Care
  doi: 10.1097/mcc.0000000000001019
– volume: 9
  year: 2018
  ident: B13
  article-title: G protein-coupled receptor 109A and host microbiota modulate intestinal epithelial integrity during sepsis
  publication-title: Front Immunol
  doi: 10.3389/fimmu.2018.02079
– volume: 14
  year: 2023
  ident: B16
  article-title: Gut microbiota and sepsis: bidirectional Mendelian study and mediation analysis
  publication-title: Front Immunol
  doi: 10.3389/fimmu.2023.1234924
– volume: 80
  year: 2022
  ident: B3
  article-title: Burden of bacterial bloodstream infections and recent advances for diagnosis
  publication-title: Pathog Dis
  doi: 10.1093/femspd/ftac027
– volume: 10
  year: 2019
  ident: B38
  article-title: Short chain fatty acids (SCFAs)-mediated gut epithelial and immune regulation and its relevance for inflammatory bowel diseases
  publication-title: Front Immunol
  doi: 10.3389/fimmu.2019.00277
– volume: 9
  year: 2022
  ident: B35
  article-title: Dynamic change of fecal microbiota and metabolomics in a polymicrobial murine sepsis model
  publication-title: Acute Med Surg
  doi: 10.1002/ams2.770
– volume: 50
  year: 2018
  ident: B45
  article-title: Hydrogen-rich saline regulates intestinal barrier dysfunction, dysbiosis, and bacterial translocation in a murine model of sepsis
  publication-title: Shock
  doi: 10.1097/shk.0000000000001098
– volume: 31
  year: 2012
  ident: B30
  article-title: The impact of diabetes on the pathogenesis of sepsis
  publication-title: Eur J Clin Microbiol Infect Dis
  doi: 10.1007/s10096-011-1337-4
– volume: 32
  start-page: 1
  year: 2003
  ident: B14
  article-title: 'Mendelian randomization': can genetic epidemiology contribute to understanding environmental determinants of disease
  publication-title: Int J Epidemiol
  doi: 10.1093/ije/dyg070
– volume: 6
  year: 2004
  ident: B40
  article-title: Lentisphaera araneosa gen. nov., sp. nov, a transparent exopolymer producing marine bacterium, and the description of a novel bacterial phylum, Lentisphaerae
  publication-title: Environ Microbiol
  doi: 10.1111/j.1462-2920.2004.00614.x
– volume: 14
  year: 2023
  ident: B15
  article-title: Causal effects of gut microbiota on sepsis: a two-sample Mendelian randomization study
  publication-title: Front Microbiol
  doi: 10.3389/fmicb.2023.1167416
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Snippet It is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a...
BackgroundIt is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine...
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SubjectTerms Bacteroidetes - genetics
causality
Gastrointestinal Microbiome
Genome-Wide Association Study
gut microbiota
Humans
Immunology
Mendelian randomization
Mendelian Randomization Analysis
sepsis
Sepsis - genetics
sepsis-related death
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Title Gut microbiota and sepsis and sepsis-related death: a Mendelian randomization investigation
URI https://www.ncbi.nlm.nih.gov/pubmed/38361921
https://www.proquest.com/docview/2928241332
https://pubmed.ncbi.nlm.nih.gov/PMC10867964
https://doaj.org/article/412bae61ed2f4cb28cfeaaf4c95ff7d6
Volume 15
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