Gut microbiota and sepsis and sepsis-related death: a Mendelian randomization investigation
It is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a causal link exists between the two. This study used publicly available genome-wide association studies (GWAS) summary data of gut microbiota...
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Published in | Frontiers in immunology Vol. 15; p. 1266230 |
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Abstract | It is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a causal link exists between the two.
This study used publicly available genome-wide association studies (GWAS) summary data of gut microbiota, sepsis, sepsis (critical care), and sepsis (28-day death in critical care) to perform a two-sample MR analysis. To ensure the robustness of the results, we also conducted a sensitivity analysis.
For sepsis susceptibility, inverse variance weighted (IVW) estimates revealed that
(OR = 0.86, 95% CI, 0.78-0.94,
= 0.0017) was protective against sepsis, while
(OR = 0.89, 95% CI, 0.80-0.99),
(OR = 1.37, 95% CI, 1.08-1.73),
(OR = 1.21, 95% CI, 1.04-1.40),
(OR = 1.10, 95% CI, 1.01-1.20),
(OR = 0.85, 95% CI, 0.74-0.97), and
(OR = 0.81, 95% CI, 0.69-0.94) presented a suggestive association with the development of sepsis (all
< 0.05). For sepsis (critical care), IVW estimates indicated that
(OR = 0.70, 95% CI, 0.53-0.93),
(OR = 0.67, 95% CI, 0.50-0.91),
(OR = 0.49, 95% CI, 0.31-0.76),
(OR = 0.51, 95% CI, 0.34-0.77), and
(OR = 0.66, 95% CI, 0.44-0.99) showed a suggestive negative correlation with sepsis (critical care) (all
< 0.05). For sepsis (28-day death in critical care), IVW estimates suggested that four bacterial taxa had a normally significant negative correlation with the risk of sepsis-related death, including
(OR = 0.54, 95% CI, 0.30-0.95),
(OR = 0.34, 95% CI, 0.14-0.83),
(OR = 0.43, 95% CI, 0.22-0.83), and
(OR = 0.45, 95% CI, 0.21-0.97), while two bacterial taxa were normally significantly positively linked to the risk of sepsis-related death, namely,
(OR = 2.03, 95% CI, 1.01-4.08) and
(OR = 2.65, 95% CI, 1.18-5.96) (all
< 0.05). The robustness of the above correlations was verified by additional sensitivity analyses.
This MR research found that several gut microbiota taxa were causally linked to the risk of sepsis, sepsis in critical care, and sepsis-related 28-day mortality in critical care. |
---|---|
AbstractList | BackgroundIt is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a causal link exists between the two.MethodsThis study used publicly available genome-wide association studies (GWAS) summary data of gut microbiota, sepsis, sepsis (critical care), and sepsis (28-day death in critical care) to perform a two-sample MR analysis. To ensure the robustness of the results, we also conducted a sensitivity analysis.ResultsFor sepsis susceptibility, inverse variance weighted (IVW) estimates revealed that Victivallales (OR = 0.86, 95% CI, 0.78–0.94, p = 0.0017) was protective against sepsis, while Lentisphaerae (OR = 0.89, 95% CI, 0.80–0.99), Gammaproteobacteria (OR = 1.37, 95% CI, 1.08–1.73), Clostridiaceae1 (OR = 1.21, 95% CI, 1.04–1.40), RuminococcaceaeUCG011 (OR = 1.10, 95% CI, 1.01–1.20), Dialister (OR = 0.85, 95% CI, 0.74–0.97), and Coprococcus2 (OR = 0.81, 95% CI, 0.69–0.94) presented a suggestive association with the development of sepsis (all p < 0.05). For sepsis (critical care), IVW estimates indicated that Lentisphaerae (OR = 0.70, 95% CI, 0.53–0.93), Victivallales (OR = 0.67, 95% CI, 0.50–0.91), Anaerostipes (OR = 0.49, 95% CI, 0.31–0.76), LachnospiraceaeUCG004 (OR = 0.51, 95% CI, 0.34–0.77), and Coprococcus1 (OR = 0.66, 95% CI, 0.44–0.99) showed a suggestive negative correlation with sepsis (critical care) (all p < 0.05). For sepsis (28-day death in critical care), IVW estimates suggested that four bacterial taxa had a normally significant negative correlation with the risk of sepsis-related death, including Victivallales (OR = 0.54, 95% CI, 0.30–0.95), Coprococcus2 (OR = 0.34, 95% CI, 0.14–0.83), Ruminiclostridium6 (OR = 0.43, 95% CI, 0.22–0.83), and Coprococcus1 (OR = 0.45, 95% CI, 0.21–0.97), while two bacterial taxa were normally significantly positively linked to the risk of sepsis-related death, namely, Mollicutes (OR = 2.03, 95% CI, 1.01–4.08) and Bacteroidales (OR = 2.65, 95% CI, 1.18–5.96) (all p < 0.05). The robustness of the above correlations was verified by additional sensitivity analyses.ConclusionThis MR research found that several gut microbiota taxa were causally linked to the risk of sepsis, sepsis in critical care, and sepsis-related 28-day mortality in critical care. It is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a causal link exists between the two. This study used publicly available genome-wide association studies (GWAS) summary data of gut microbiota, sepsis, sepsis (critical care), and sepsis (28-day death in critical care) to perform a two-sample MR analysis. To ensure the robustness of the results, we also conducted a sensitivity analysis. For sepsis susceptibility, inverse variance weighted (IVW) estimates revealed that (OR = 0.86, 95% CI, 0.78-0.94, = 0.0017) was protective against sepsis, while (OR = 0.89, 95% CI, 0.80-0.99), (OR = 1.37, 95% CI, 1.08-1.73), (OR = 1.21, 95% CI, 1.04-1.40), (OR = 1.10, 95% CI, 1.01-1.20), (OR = 0.85, 95% CI, 0.74-0.97), and (OR = 0.81, 95% CI, 0.69-0.94) presented a suggestive association with the development of sepsis (all < 0.05). For sepsis (critical care), IVW estimates indicated that (OR = 0.70, 95% CI, 0.53-0.93), (OR = 0.67, 95% CI, 0.50-0.91), (OR = 0.49, 95% CI, 0.31-0.76), (OR = 0.51, 95% CI, 0.34-0.77), and (OR = 0.66, 95% CI, 0.44-0.99) showed a suggestive negative correlation with sepsis (critical care) (all < 0.05). For sepsis (28-day death in critical care), IVW estimates suggested that four bacterial taxa had a normally significant negative correlation with the risk of sepsis-related death, including (OR = 0.54, 95% CI, 0.30-0.95), (OR = 0.34, 95% CI, 0.14-0.83), (OR = 0.43, 95% CI, 0.22-0.83), and (OR = 0.45, 95% CI, 0.21-0.97), while two bacterial taxa were normally significantly positively linked to the risk of sepsis-related death, namely, (OR = 2.03, 95% CI, 1.01-4.08) and (OR = 2.65, 95% CI, 1.18-5.96) (all < 0.05). The robustness of the above correlations was verified by additional sensitivity analyses. This MR research found that several gut microbiota taxa were causally linked to the risk of sepsis, sepsis in critical care, and sepsis-related 28-day mortality in critical care. It is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a causal link exists between the two.BackgroundIt is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a causal link exists between the two.This study used publicly available genome-wide association studies (GWAS) summary data of gut microbiota, sepsis, sepsis (critical care), and sepsis (28-day death in critical care) to perform a two-sample MR analysis. To ensure the robustness of the results, we also conducted a sensitivity analysis.MethodsThis study used publicly available genome-wide association studies (GWAS) summary data of gut microbiota, sepsis, sepsis (critical care), and sepsis (28-day death in critical care) to perform a two-sample MR analysis. To ensure the robustness of the results, we also conducted a sensitivity analysis.For sepsis susceptibility, inverse variance weighted (IVW) estimates revealed that Victivallales (OR = 0.86, 95% CI, 0.78-0.94, p = 0.0017) was protective against sepsis, while Lentisphaerae (OR = 0.89, 95% CI, 0.80-0.99), Gammaproteobacteria (OR = 1.37, 95% CI, 1.08-1.73), Clostridiaceae1 (OR = 1.21, 95% CI, 1.04-1.40), RuminococcaceaeUCG011 (OR = 1.10, 95% CI, 1.01-1.20), Dialister (OR = 0.85, 95% CI, 0.74-0.97), and Coprococcus2 (OR = 0.81, 95% CI, 0.69-0.94) presented a suggestive association with the development of sepsis (all p < 0.05). For sepsis (critical care), IVW estimates indicated that Lentisphaerae (OR = 0.70, 95% CI, 0.53-0.93), Victivallales (OR = 0.67, 95% CI, 0.50-0.91), Anaerostipes (OR = 0.49, 95% CI, 0.31-0.76), LachnospiraceaeUCG004 (OR = 0.51, 95% CI, 0.34-0.77), and Coprococcus1 (OR = 0.66, 95% CI, 0.44-0.99) showed a suggestive negative correlation with sepsis (critical care) (all p < 0.05). For sepsis (28-day death in critical care), IVW estimates suggested that four bacterial taxa had a normally significant negative correlation with the risk of sepsis-related death, including Victivallales (OR = 0.54, 95% CI, 0.30-0.95), Coprococcus2 (OR = 0.34, 95% CI, 0.14-0.83), Ruminiclostridium6 (OR = 0.43, 95% CI, 0.22-0.83), and Coprococcus1 (OR = 0.45, 95% CI, 0.21-0.97), while two bacterial taxa were normally significantly positively linked to the risk of sepsis-related death, namely, Mollicutes (OR = 2.03, 95% CI, 1.01-4.08) and Bacteroidales (OR = 2.65, 95% CI, 1.18-5.96) (all p < 0.05). The robustness of the above correlations was verified by additional sensitivity analyses.ResultsFor sepsis susceptibility, inverse variance weighted (IVW) estimates revealed that Victivallales (OR = 0.86, 95% CI, 0.78-0.94, p = 0.0017) was protective against sepsis, while Lentisphaerae (OR = 0.89, 95% CI, 0.80-0.99), Gammaproteobacteria (OR = 1.37, 95% CI, 1.08-1.73), Clostridiaceae1 (OR = 1.21, 95% CI, 1.04-1.40), RuminococcaceaeUCG011 (OR = 1.10, 95% CI, 1.01-1.20), Dialister (OR = 0.85, 95% CI, 0.74-0.97), and Coprococcus2 (OR = 0.81, 95% CI, 0.69-0.94) presented a suggestive association with the development of sepsis (all p < 0.05). For sepsis (critical care), IVW estimates indicated that Lentisphaerae (OR = 0.70, 95% CI, 0.53-0.93), Victivallales (OR = 0.67, 95% CI, 0.50-0.91), Anaerostipes (OR = 0.49, 95% CI, 0.31-0.76), LachnospiraceaeUCG004 (OR = 0.51, 95% CI, 0.34-0.77), and Coprococcus1 (OR = 0.66, 95% CI, 0.44-0.99) showed a suggestive negative correlation with sepsis (critical care) (all p < 0.05). For sepsis (28-day death in critical care), IVW estimates suggested that four bacterial taxa had a normally significant negative correlation with the risk of sepsis-related death, including Victivallales (OR = 0.54, 95% CI, 0.30-0.95), Coprococcus2 (OR = 0.34, 95% CI, 0.14-0.83), Ruminiclostridium6 (OR = 0.43, 95% CI, 0.22-0.83), and Coprococcus1 (OR = 0.45, 95% CI, 0.21-0.97), while two bacterial taxa were normally significantly positively linked to the risk of sepsis-related death, namely, Mollicutes (OR = 2.03, 95% CI, 1.01-4.08) and Bacteroidales (OR = 2.65, 95% CI, 1.18-5.96) (all p < 0.05). The robustness of the above correlations was verified by additional sensitivity analyses.This MR research found that several gut microbiota taxa were causally linked to the risk of sepsis, sepsis in critical care, and sepsis-related 28-day mortality in critical care.ConclusionThis MR research found that several gut microbiota taxa were causally linked to the risk of sepsis, sepsis in critical care, and sepsis-related 28-day mortality in critical care. |
Author | Shang, Weifeng Qian, Hang Zhang, Sheng Li, Hui Liu, Jiao Huang, Sisi Chen, Dechang |
AuthorAffiliation | Department of Critical Care Medicine, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine , Shanghai , China |
AuthorAffiliation_xml | – name: Department of Critical Care Medicine, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine , Shanghai , China |
Author_xml | – sequence: 1 givenname: Weifeng surname: Shang fullname: Shang, Weifeng – sequence: 2 givenname: Sheng surname: Zhang fullname: Zhang, Sheng – sequence: 3 givenname: Hang surname: Qian fullname: Qian, Hang – sequence: 4 givenname: Sisi surname: Huang fullname: Huang, Sisi – sequence: 5 givenname: Hui surname: Li fullname: Li, Hui – sequence: 6 givenname: Jiao surname: Liu fullname: Liu, Jiao – sequence: 7 givenname: Dechang surname: Chen fullname: Chen, Dechang |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/38361921$$D View this record in MEDLINE/PubMed |
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ContentType | Journal Article |
Copyright | Copyright © 2024 Shang, Zhang, Qian, Huang, Li, Liu and Chen. Copyright © 2024 Shang, Zhang, Qian, Huang, Li, Liu and Chen 2024 Shang, Zhang, Qian, Huang, Li, Liu and Chen |
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Keywords | sepsis-related death Mendelian randomization gut microbiota sepsis causality |
Language | English |
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Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 Reviewed by: Flavia Silva, Rio de Janeiro State University, Brazil Edited by: Louisy Santos, Rio de Janeiro State University, Brazil These authors have contributed equally to this work Georgia Damoraki, National and Kapodistrian University of Athens, Greece |
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Snippet | It is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine whether a... BackgroundIt is unclear what the causal relationship is between the gut microbiota and sepsis. Therefore, we employed Mendelian randomization (MR) to determine... |
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SubjectTerms | Bacteroidetes - genetics causality Gastrointestinal Microbiome Genome-Wide Association Study gut microbiota Humans Immunology Mendelian randomization Mendelian Randomization Analysis sepsis Sepsis - genetics sepsis-related death |
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Title | Gut microbiota and sepsis and sepsis-related death: a Mendelian randomization investigation |
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