Fungal species associated with grapevine trunk diseases in Washington wine grapes and California table grapes, with novelties in the genera Cadophora , Cytospora , and Sporocadus

Grapevine trunk diseases cause serious economic losses to grape growers worldwide. The identification of the causal fungi is critical to implementing appropriate management strategies. Through a culture-based approach, we identified the fungal species composition associated with symptomatic grapevin...

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Published inFrontiers in fungal biology Vol. 3; p. 1018140
Main Authors Travadon, Renaud, Lawrence, Daniel P, Moyer, Michelle M, Fujiyoshi, Phillip T, Baumgartner, Kendra
Format Journal Article
LanguageEnglish
Published Switzerland Frontiers Media S.A 07.10.2022
Subjects
Diatrypaceae
Fungal Biology
fungal diversity
fungal ecology
Leotiomycetes
Sordariomycetes
taxonomy
Sordariomycetes
fungal diversity
Leotiomycetes
Diatrypaceae
Kalmusia
taxonomy
Thyrostroma
fungal ecology
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Abstract Grapevine trunk diseases cause serious economic losses to grape growers worldwide. The identification of the causal fungi is critical to implementing appropriate management strategies. Through a culture-based approach, we identified the fungal species composition associated with symptomatic grapevines from wine grapes in southeastern Washington and table grapes in the southern San Joaquin Valley of California, two regions with contrasting winter climates. Species were confirmed through molecular identification, sequencing two to six gene regions per isolate. Multilocus phylogenetic analyses were used to identify novel species. We identified 36 species from 112 isolates, with a combination of species that are new to science, are known causal fungi of grapevine trunk diseases, or are known causal fungi of diseases of other woody plants. The novel species , , , and are formally described and introduced, six species are newly reported from North America, and grape is reported as a new host for three species. Six species were shared between the two regions: , , , , , and . Dominating the fungal community in Washington wine grape vineyards were species in the fungal families Diatrypaceae, Cytosporaceae and Sporocadaceae, whereas in California table grape vineyards, the dominant species were in the families Diatrypaceae, Togniniaceae, Phaeomoniellaceae and Hymenochaetaceae. Pathogenicity tests demonstrated that 10 isolates caused wood discoloration similar to symptomatic wood from which they were originally isolated. Growth rates at temperatures from 5 to 35°C of 10 isolates per region, suggest that adaptation to local climate might explain their distribution.
AbstractList Grapevine trunk diseases cause serious economic losses to grape growers worldwide. The identification of the causal fungi is critical to implementing appropriate management strategies. Through a culture-based approach, we identified the fungal species composition associated with symptomatic grapevines from wine grapes in southeastern Washington and table grapes in the southern San Joaquin Valley of California, two regions with contrasting winter climates. Species were confirmed through molecular identification, sequencing two to six gene regions per isolate. Multilocus phylogenetic analyses were used to identify novel species. We identified 36 species from 112 isolates, with a combination of species that are new to science, are known causal fungi of grapevine trunk diseases, or are known causal fungi of diseases of other woody plants. The novel species Cadophora columbiana , Cytospora macropycnidia , Cytospora yakimana , and Sporocadus incarnatus are formally described and introduced, six species are newly reported from North America, and grape is reported as a new host for three species. Six species were shared between the two regions: Cytospora viticola , Diatrype stigma , Diplodia seriata , Kalmusia variispora , Phaeoacremonium minimum , and Phaeomoniella chlamydospora . Dominating the fungal community in Washington wine grape vineyards were species in the fungal families Diatrypaceae, Cytosporaceae and Sporocadaceae, whereas in California table grape vineyards, the dominant species were in the families Diatrypaceae, Togniniaceae, Phaeomoniellaceae and Hymenochaetaceae. Pathogenicity tests demonstrated that 10 isolates caused wood discoloration similar to symptomatic wood from which they were originally isolated. Growth rates at temperatures from 5 to 35°C of 10 isolates per region, suggest that adaptation to local climate might explain their distribution.
Grapevine trunk diseases cause serious economic losses to grape growers worldwide. The identification of the causal fungi is critical to implementing appropriate management strategies. Through a culture-based approach, we identified the fungal species composition associated with symptomatic grapevines from wine grapes in southeastern Washington and table grapes in the southern San Joaquin Valley of California, two regions with contrasting winter climates. Species were confirmed through molecular identification, sequencing two to six gene regions per isolate. Multilocus phylogenetic analyses were used to identify novel species. We identified 36 species from 112 isolates, with a combination of species that are new to science, are known causal fungi of grapevine trunk diseases, or are known causal fungi of diseases of other woody plants. The novel species Cadophora columbiana, Cytospora macropycnidia, Cytospora yakimana, and Sporocadus incarnatus are formally described and introduced, six species are newly reported from North America, and grape is reported as a new host for three species. Six species were shared between the two regions: Cytospora viticola, Diatrype stigma, Diplodia seriata, Kalmusia variispora, Phaeoacremonium minimum, and Phaeomoniella chlamydospora. Dominating the fungal community in Washington wine grape vineyards were species in the fungal families Diatrypaceae, Cytosporaceae and Sporocadaceae, whereas in California table grape vineyards, the dominant species were in the families Diatrypaceae, Togniniaceae, Phaeomoniellaceae and Hymenochaetaceae. Pathogenicity tests demonstrated that 10 isolates caused wood discoloration similar to symptomatic wood from which they were originally isolated. Growth rates at temperatures from 5 to 35°C of 10 isolates per region, suggest that adaptation to local climate might explain their distribution.Grapevine trunk diseases cause serious economic losses to grape growers worldwide. The identification of the causal fungi is critical to implementing appropriate management strategies. Through a culture-based approach, we identified the fungal species composition associated with symptomatic grapevines from wine grapes in southeastern Washington and table grapes in the southern San Joaquin Valley of California, two regions with contrasting winter climates. Species were confirmed through molecular identification, sequencing two to six gene regions per isolate. Multilocus phylogenetic analyses were used to identify novel species. We identified 36 species from 112 isolates, with a combination of species that are new to science, are known causal fungi of grapevine trunk diseases, or are known causal fungi of diseases of other woody plants. The novel species Cadophora columbiana, Cytospora macropycnidia, Cytospora yakimana, and Sporocadus incarnatus are formally described and introduced, six species are newly reported from North America, and grape is reported as a new host for three species. Six species were shared between the two regions: Cytospora viticola, Diatrype stigma, Diplodia seriata, Kalmusia variispora, Phaeoacremonium minimum, and Phaeomoniella chlamydospora. Dominating the fungal community in Washington wine grape vineyards were species in the fungal families Diatrypaceae, Cytosporaceae and Sporocadaceae, whereas in California table grape vineyards, the dominant species were in the families Diatrypaceae, Togniniaceae, Phaeomoniellaceae and Hymenochaetaceae. Pathogenicity tests demonstrated that 10 isolates caused wood discoloration similar to symptomatic wood from which they were originally isolated. Growth rates at temperatures from 5 to 35°C of 10 isolates per region, suggest that adaptation to local climate might explain their distribution.
Grapevine trunk diseases cause serious economic losses to grape growers worldwide. The identification of the causal fungi is critical to implementing appropriate management strategies. Through a culture-based approach, we identified the fungal species composition associated with symptomatic grapevines from wine grapes in southeastern Washington and table grapes in the southern San Joaquin Valley of California, two regions with contrasting winter climates. Species were confirmed through molecular identification, sequencing two to six gene regions per isolate. Multilocus phylogenetic analyses were used to identify novel species. We identified 36 species from 112 isolates, with a combination of species that are new to science, are known causal fungi of grapevine trunk diseases, or are known causal fungi of diseases of other woody plants. The novel species , , , and are formally described and introduced, six species are newly reported from North America, and grape is reported as a new host for three species. Six species were shared between the two regions: , , , , , and . Dominating the fungal community in Washington wine grape vineyards were species in the fungal families Diatrypaceae, Cytosporaceae and Sporocadaceae, whereas in California table grape vineyards, the dominant species were in the families Diatrypaceae, Togniniaceae, Phaeomoniellaceae and Hymenochaetaceae. Pathogenicity tests demonstrated that 10 isolates caused wood discoloration similar to symptomatic wood from which they were originally isolated. Growth rates at temperatures from 5 to 35°C of 10 isolates per region, suggest that adaptation to local climate might explain their distribution.
Grapevine trunk diseases cause serious economic losses to grape growers worldwide. The identification of the causal fungi is critical to implementing appropriate management strategies. Through a culture-based approach, we identified the fungal species composition associated with symptomatic grapevines from wine grapes in southeastern Washington and table grapes in the southern San Joaquin Valley of California, two regions with contrasting winter climates. Species were confirmed through molecular identification, sequencing two to six gene regions per isolate. Multilocus phylogenetic analyses were used to identify novel species. We identified 36 species from 112 isolates, with a combination of species that are new to science, are known causal fungi of grapevine trunk diseases, or are known causal fungi of diseases of other woody plants. The novel species Cadophora columbiana, Cytospora macropycnidia, Cytospora yakimana, and Sporocadus incarnatus are formally described and introduced, six species are newly reported from North America, and grape is reported as a new host for three species. Six species were shared between the two regions: Cytospora viticola, Diatrype stigma, Diplodia seriata, Kalmusia variispora, Phaeoacremonium minimum, and Phaeomoniella chlamydospora. Dominating the fungal community in Washington wine grape vineyards were species in the fungal families Diatrypaceae, Cytosporaceae and Sporocadaceae, whereas in California table grape vineyards, the dominant species were in the families Diatrypaceae, Togniniaceae, Phaeomoniellaceae and Hymenochaetaceae. Pathogenicity tests demonstrated that 10 isolates caused wood discoloration similar to symptomatic wood from which they were originally isolated. Growth rates at temperatures from 5 to 35°C of 10 isolates per region, suggest that adaptation to local climate might explain their distribution.
Author Moyer, Michelle M
Lawrence, Daniel P
Baumgartner, Kendra
Travadon, Renaud
Fujiyoshi, Phillip T
AuthorAffiliation 3 Crops Pathology and Genetics Research Unit, United States Department of Agriculture – Agricultural Research Service , Davis, CA , United States
1 Department of Plant Pathology, University of California, Davis , Davis, CA , United States
2 Department of Horticulture, Irrigated Agriculture Research and Extension Center, Washington State University , Prosser, WA , United States
AuthorAffiliation_xml – name: 3 Crops Pathology and Genetics Research Unit, United States Department of Agriculture – Agricultural Research Service , Davis, CA , United States
– name: 2 Department of Horticulture, Irrigated Agriculture Research and Extension Center, Washington State University , Prosser, WA , United States
– name: 1 Department of Plant Pathology, University of California, Davis , Davis, CA , United States
Author_xml – sequence: 1
  givenname: Renaud
  surname: Travadon
  fullname: Travadon, Renaud
  organization: Department of Plant Pathology, University of California, Davis, Davis, CA, United States
– sequence: 2
  givenname: Daniel P
  surname: Lawrence
  fullname: Lawrence, Daniel P
  organization: Department of Plant Pathology, University of California, Davis, Davis, CA, United States
– sequence: 3
  givenname: Michelle M
  surname: Moyer
  fullname: Moyer, Michelle M
  organization: Department of Horticulture, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, WA, United States
– sequence: 4
  givenname: Phillip T
  surname: Fujiyoshi
  fullname: Fujiyoshi, Phillip T
  organization: Crops Pathology and Genetics Research Unit, United States Department of Agriculture - Agricultural Research Service, Davis, CA, United States
– sequence: 5
  givenname: Kendra
  surname: Baumgartner
  fullname: Baumgartner, Kendra
  organization: Crops Pathology and Genetics Research Unit, United States Department of Agriculture - Agricultural Research Service, Davis, CA, United States
BackLink https://www.ncbi.nlm.nih.gov/pubmed/37746176$$D View this record in MEDLINE/PubMed
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ContentType Journal Article
Copyright Copyright © 2022 Travadon, Lawrence, Moyer, Fujiyoshi and Baumgartner.
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Keywords Sordariomycetes
fungal diversity
Leotiomycetes
Diatrypaceae
Kalmusia
taxonomy
Thyrostroma
fungal ecology
Language English
License Copyright © 2022 Travadon, Lawrence, Moyer, Fujiyoshi and Baumgartner.
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Edited by: Gonzalo A. Diaz, Universidad de Talca, Chile
This article was submitted to Fungi-Plant Interactions, a section of the journal Frontiers in Fungal Biology
Reviewed by: Christian Kraus, Julius Kühn-Institut, Germany; Josep Armengol, Universitat Politècnica de València, Spain
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Snippet Grapevine trunk diseases cause serious economic losses to grape growers worldwide. The identification of the causal fungi is critical to implementing...
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SubjectTerms Diatrypaceae
Fungal Biology
fungal diversity
fungal ecology
Leotiomycetes
Sordariomycetes
taxonomy
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Title Fungal species associated with grapevine trunk diseases in Washington wine grapes and California table grapes, with novelties in the genera Cadophora , Cytospora , and Sporocadus
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