Redondoviridae : High Prevalence and Possibly Chronic Shedding in Human Respiratory Tract, But No Zoonotic Transmission

is a recently discovered DNA virus family consisting of two species, and . Here we used PCR amplification and sequencing to characterize redondoviruses in nasal/throat swabs collected longitudinally from a cohort of 58 individuals working with animals in Vietnam. We additionally analyzed samples fro...

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Published inViruses Vol. 13; no. 4; p. 533
Main Authors Tu, Nguyen Thi Kha, Deng, Xutao, Hong, Nguyen Thi Thu, Ny, Nguyen Thi Han, Phuc, Tran My, Tam, Pham Thi Thanh, Han, Duong An, Ha, Luu Thi Thu, Thwaites, Guy, Doorn, H Rogier van, Virtala, Anna-Maija K, Delwart, Eric, Baker, Stephen, Vapalahti, Olli, Tan, Le Van, On Behalf Of The Vizions Consortium
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LanguageEnglish
Published Switzerland MDPI AG 24.03.2021
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Abstract is a recently discovered DNA virus family consisting of two species, and . Here we used PCR amplification and sequencing to characterize redondoviruses in nasal/throat swabs collected longitudinally from a cohort of 58 individuals working with animals in Vietnam. We additionally analyzed samples from animals to which redondovirus DNA-positive participants were exposed. Redondoviruses were detected in approximately 60% of study participants, including 33% (30/91) of samples collected during episodes of acute respiratory disease and in 50% (29/58) of baseline samples (with no respiratory symptoms). Vientovirus (73%; 24/33) was detected more frequently in samples than brisaviruses (27%; 9/33). In the 23 participants with at least 2 redondovirus-positive samples among their longitudinal samples, 10 (43.5%) had identical redondovirus replication-gene sequences detected (sampling duration: 35-132 days). We found no identical redondovirus replication genes in samples from different participants, and no redondoviruses were detected in 53 pooled nasal/throat swabs collected from domestic animals. Phylogenetic analysis described no large-scale geographical clustering between viruses from Vietnam, the US, Spain, and China, indicating that redondoviruses are highly genetically diverse and have a wide geographical distribution. Collectively, our study provides novel insights into the family in humans, describing a high prevalence, potentially associated with chronic shedding in the respiratory tract with lack of evidence of zoonotic transmission from close animal contacts. The tropism and potential pathogenicity of this viral family remain to be determined.
AbstractList Redondoviridae is a recently discovered DNA virus family consisting of two species, vientovirus and brisavirus. Here we used PCR amplification and sequencing to characterize redondoviruses in nasal/throat swabs collected longitudinally from a cohort of 58 individuals working with animals in Vietnam. We additionally analyzed samples from animals to which redondovirus DNA-positive participants were exposed. Redondoviruses were detected in approximately 60% of study participants, including 33% (30/91) of samples collected during episodes of acute respiratory disease and in 50% (29/58) of baseline samples (with no respiratory symptoms). Vientovirus (73%; 24/33) was detected more frequently in samples than brisaviruses (27%; 9/33). In the 23 participants with at least 2 redondovirus-positive samples among their longitudinal samples, 10 (43.5%) had identical redondovirus replication-gene sequences detected (sampling duration: 35–132 days). We found no identical redondovirus replication genes in samples from different participants, and no redondoviruses were detected in 53 pooled nasal/throat swabs collected from domestic animals. Phylogenetic analysis described no large-scale geographical clustering between viruses from Vietnam, the US, Spain, and China, indicating that redondoviruses are highly genetically diverse and have a wide geographical distribution. Collectively, our study provides novel insights into the Redondoviridae family in humans, describing a high prevalence, potentially associated with chronic shedding in the respiratory tract with lack of evidence of zoonotic transmission from close animal contacts. The tropism and potential pathogenicity of this viral family remain to be determined.
is a recently discovered DNA virus family consisting of two species, and . Here we used PCR amplification and sequencing to characterize redondoviruses in nasal/throat swabs collected longitudinally from a cohort of 58 individuals working with animals in Vietnam. We additionally analyzed samples from animals to which redondovirus DNA-positive participants were exposed. Redondoviruses were detected in approximately 60% of study participants, including 33% (30/91) of samples collected during episodes of acute respiratory disease and in 50% (29/58) of baseline samples (with no respiratory symptoms). Vientovirus (73%; 24/33) was detected more frequently in samples than brisaviruses (27%; 9/33). In the 23 participants with at least 2 redondovirus-positive samples among their longitudinal samples, 10 (43.5%) had identical redondovirus replication-gene sequences detected (sampling duration: 35-132 days). We found no identical redondovirus replication genes in samples from different participants, and no redondoviruses were detected in 53 pooled nasal/throat swabs collected from domestic animals. Phylogenetic analysis described no large-scale geographical clustering between viruses from Vietnam, the US, Spain, and China, indicating that redondoviruses are highly genetically diverse and have a wide geographical distribution. Collectively, our study provides novel insights into the family in humans, describing a high prevalence, potentially associated with chronic shedding in the respiratory tract with lack of evidence of zoonotic transmission from close animal contacts. The tropism and potential pathogenicity of this viral family remain to be determined.
Redondoviridae is a recently discovered DNA virus family consisting of two species, vientovirus and brisavirus . Here we used PCR amplification and sequencing to characterize redondoviruses in nasal/throat swabs collected longitudinally from a cohort of 58 individuals working with animals in Vietnam. We additionally analyzed samples from animals to which redondovirus DNA-positive participants were exposed. Redondoviruses were detected in approximately 60% of study participants, including 33% (30/91) of samples collected during episodes of acute respiratory disease and in 50% (29/58) of baseline samples (with no respiratory symptoms). Vientovirus (73%; 24/33) was detected more frequently in samples than brisaviruses (27%; 9/33). In the 23 participants with at least 2 redondovirus-positive samples among their longitudinal samples, 10 (43.5%) had identical redondovirus replication-gene sequences detected (sampling duration: 35–132 days). We found no identical redondovirus replication genes in samples from different participants, and no redondoviruses were detected in 53 pooled nasal/throat swabs collected from domestic animals. Phylogenetic analysis described no large-scale geographical clustering between viruses from Vietnam, the US, Spain, and China, indicating that redondoviruses are highly genetically diverse and have a wide geographical distribution. Collectively, our study provides novel insights into the Redondoviridae family in humans, describing a high prevalence, potentially associated with chronic shedding in the respiratory tract with lack of evidence of zoonotic transmission from close animal contacts. The tropism and potential pathogenicity of this viral family remain to be determined.
Author Tu, Nguyen Thi Kha
Deng, Xutao
Tan, Le Van
Ha, Luu Thi Thu
Tam, Pham Thi Thanh
Doorn, H Rogier van
Phuc, Tran My
Virtala, Anna-Maija K
Vapalahti, Olli
Hong, Nguyen Thi Thu
Delwart, Eric
Han, Duong An
Thwaites, Guy
Ny, Nguyen Thi Han
On Behalf Of The Vizions Consortium
Baker, Stephen
AuthorAffiliation 9 Cambridge Institute of Therapeutic Immunology & Infectious Disease (CITIID), Department of Medicine, University of Cambridge, Cambridge CB2 0QQ, UK; sgb47@medschl.cam.ac.uk
1 Doctoral School in Health Sciences, Faculty of Medicine, University of Helsinki, 00014 Helsinki, Finland; olli.vapalahti@helsinki.fi
8 Department of Veterinary Biosciences, Faculty of Veterinary Medicine, University of Helsinki, 00014 Helsinki, Finland; anna-maija.virtala@helsinki.fi
6 Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7LG, UK; rvandoorn@oucru.org
7 Oxford University Clinical Research Unit, Ha Noi 8000, Vietnam
5 Vitalant Research Institute, San Francisco, CA 94118, USA
2 Emerging Infection Group, Oxford University Clinical Research Unit, Ho Chi Minh City 7000, Vietnam; hongntt@oucru.org (N.T.T.H.); nynth@oucru.org (N.T.H.N.); phuctm@oucru.org (T.M.P.); tamptt@oucru.org (P.T.T.T.); gthwaites@oucru.org (G.T.)
3 Dong Thap Provincial Center fo
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CitedBy_id crossref_primary_10_3390_ijms24076303
crossref_primary_10_1016_j_coviro_2022_101248
crossref_primary_10_1002_jmv_27624
crossref_primary_10_1186_s12879_024_09523_6
crossref_primary_10_3390_v14112482
Cites_doi 10.1016/j.jcv.2020.104586
10.1002/jmv.25640
10.1016/j.jviromet.2004.08.014
10.1128/JCM.00386-19
10.3390/v12090960
10.1038/srep17965
10.1099/vir.0.028704-0
10.46945/bpj.10.1.03.01
10.1128/mBio.03250-19
10.1186/1471-2334-13-97
10.1186/s12915-014-0087-z
10.1007/s10393-019-01444-0
10.1159/000369211
10.1128/mBio.00014-19
10.1111/j.2517-6161.1995.tb02031.x
10.54846/jshap/830
10.1007/s00705-017-3481-3
10.1128/JVI.02109-09
10.3390/v12030327
10.1016/j.chom.2019.04.001
10.1016/j.cmi.2019.04.028
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Keywords vientovirus
brisavirus
persistence
redondoviruses
animals
respiratory
zoonosis
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These authors contributed equally to this work.
The members of the VIZIONS Consortium are listed in the Acknowledgements.
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References Benjamini (ref_17) 1995; 57
Li (ref_20) 2010; 92
Nguyen (ref_13) 2019; 92
ref_11
Salter (ref_14) 2014; 12
ref_18
Spezia (ref_10) 2020; 131
ref_16
Brunborg (ref_24) 2004; 122
Li (ref_21) 2009; 84
Prasetyo (ref_4) 2015; 58
Tu (ref_6) 2019; 16
ref_23
Hetzel (ref_22) 2019; 10
Anh (ref_7) 2019; 57
Cuong (ref_25) 2014; 22
ref_1
Asplund (ref_15) 2019; 25
ref_3
ref_2
Abbas (ref_8) 2019; 25
Cui (ref_12) 2017; 162
ref_9
ref_5
Tue (ref_19) 2015; 5
References_xml – volume: 131
  start-page: 104586
  year: 2020
  ident: ref_10
  article-title: Redondovirus DNA in human respiratory samples
  publication-title: J. Clin. Virol.
  doi: 10.1016/j.jcv.2020.104586
  contributor:
    fullname: Spezia
– ident: ref_9
– volume: 92
  start-page: 971
  year: 2019
  ident: ref_13
  article-title: Respiratory viruses in individuals with a high frequency of animal exposure in southern and highland Vietnam
  publication-title: J. Med Virol.
  doi: 10.1002/jmv.25640
  contributor:
    fullname: Nguyen
– volume: 122
  start-page: 171
  year: 2004
  ident: ref_24
  article-title: Quantitation of porcine circovirus type 2 isolated from serum/plasma and tissue samples of healthy pigs and pigs with postweaning multisystemic wasting syndrome using a TaqMan-based real-time PCR
  publication-title: J. Virol. Methods
  doi: 10.1016/j.jviromet.2004.08.014
  contributor:
    fullname: Brunborg
– volume: 57
  start-page: 1
  year: 2019
  ident: ref_7
  article-title: Viruses in Vietnamese Patients Presenting with Community-Acquired Sepsis of Unknown Cause
  publication-title: J. Clin. Microbiol.
  doi: 10.1128/JCM.00386-19
  contributor:
    fullname: Anh
– ident: ref_16
  doi: 10.3390/v12090960
– volume: 5
  start-page: 17965
  year: 2015
  ident: ref_19
  article-title: The baseline characteristics and interim analyses of the high-risk sentinel cohort of the Vietnam Initiative on Zoonotic InfectiONS (VIZIONS)
  publication-title: Sci. Rep.
  doi: 10.1038/srep17965
  contributor:
    fullname: Tue
– volume: 92
  start-page: 768
  year: 2010
  ident: ref_20
  article-title: Possible cross-species transmission of circoviruses and cycloviruses among farm animals
  publication-title: J. Gen. Virol.
  doi: 10.1099/vir.0.028704-0
  contributor:
    fullname: Li
– ident: ref_3
  doi: 10.46945/bpj.10.1.03.01
– ident: ref_23
  doi: 10.1128/mBio.03250-19
– ident: ref_5
  doi: 10.1186/1471-2334-13-97
– volume: 12
  start-page: 1
  year: 2014
  ident: ref_14
  article-title: Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
  publication-title: BMC Biol.
  doi: 10.1186/s12915-014-0087-z
  contributor:
    fullname: Salter
– ident: ref_1
– ident: ref_18
– volume: 16
  start-page: 759
  year: 2019
  ident: ref_6
  article-title: Occupational Animal Contact in Southern and Central Vietnam
  publication-title: EcoHealth
  doi: 10.1007/s10393-019-01444-0
  contributor:
    fullname: Tu
– volume: 58
  start-page: 57
  year: 2015
  ident: ref_4
  article-title: Respiratory Viruses and Torque Teno Virus in Adults with Acute Respiratory Infections
  publication-title: Intervirology
  doi: 10.1159/000369211
  contributor:
    fullname: Prasetyo
– volume: 10
  start-page: e00014-19
  year: 2019
  ident: ref_22
  article-title: Identification of a Novel Deltavirus in Boa Constrictors
  publication-title: mBio
  doi: 10.1128/mBio.00014-19
  contributor:
    fullname: Hetzel
– volume: 57
  start-page: 289
  year: 1995
  ident: ref_17
  article-title: Controlling the False Discovery Rate—A Practical and Powerful Approach to Multiple Testing
  publication-title: J. R. Stat. Soc. Ser. B Methodol.
  doi: 10.1111/j.2517-6161.1995.tb02031.x
  contributor:
    fullname: Benjamini
– volume: 22
  start-page: 224
  year: 2014
  ident: ref_25
  article-title: Serological and virological surveillance for porcine reproductive and respiratory syndrome virus, porcine circovirus type 2, and influenza A viruses among smallholder swine farms of the Mekong Delta, Vietnam
  publication-title: J. Swine Health Prod.
  doi: 10.54846/jshap/830
  contributor:
    fullname: Cuong
– ident: ref_2
– volume: 162
  start-page: 3305
  year: 2017
  ident: ref_12
  article-title: Identification and genetic characterization of a novel circular single-stranded DNA virus in a human upper respiratory tract sample
  publication-title: Arch. Virol.
  doi: 10.1007/s00705-017-3481-3
  contributor:
    fullname: Cui
– volume: 84
  start-page: 1674
  year: 2009
  ident: ref_21
  article-title: Multiple Diverse Circoviruses Infect Farm Animals and Are Commonly Found in Human and Chimpanzee Feces
  publication-title: J. Virol.
  doi: 10.1128/JVI.02109-09
  contributor:
    fullname: Li
– ident: ref_11
  doi: 10.3390/v12030327
– volume: 25
  start-page: 719
  year: 2019
  ident: ref_8
  article-title: Redondoviridae, a Family of Small, Circular DNA Viruses of the Human Oro-Respiratory Tract Associated with Periodontitis and Critical Illness
  publication-title: Cell Host Microbe
  doi: 10.1016/j.chom.2019.04.001
  contributor:
    fullname: Abbas
– volume: 25
  start-page: 1277
  year: 2019
  ident: ref_15
  article-title: Contaminating viral sequences in high-throughput sequencing viromics: A linkage study of 700 sequencing libraries
  publication-title: Clin. Microbiol. Infect.
  doi: 10.1016/j.cmi.2019.04.028
  contributor:
    fullname: Asplund
SSID ssj0066907
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Snippet is a recently discovered DNA virus family consisting of two species, and . Here we used PCR amplification and sequencing to characterize redondoviruses in...
Redondoviridae is a recently discovered DNA virus family consisting of two species, vientovirus and brisavirus. Here we used PCR amplification and sequencing...
Redondoviridae is a recently discovered DNA virus family consisting of two species, vientovirus and brisavirus . Here we used PCR amplification and sequencing...
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SubjectTerms Acids
Adolescent
Adult
Aged
Animals
Binding sites
brisavirus
Child
Cohort Studies
Deoxyribonucleic acid
Disease
DNA
DNA viruses
DNA Viruses - classification
DNA Viruses - genetics
DNA Viruses - physiology
Domestic animals
Epidemiology
Farmers - statistics & numerical data
Female
Genomes
Geographical distribution
Humans
Infections
Longitudinal Studies
Male
Maximum likelihood method
Middle Aged
Nose - virology
Pandemics
Pathogenicity
persistence
Pharynx - virology
Phylogenetics
Phylogeny
Polymerase chain reaction
Prevalence
Proteins
redondoviruses
Replication
respiratory
Respiratory diseases
Respiratory tract
Respiratory Tract Infections - epidemiology
Respiratory Tract Infections - transmission
Respiratory Tract Infections - virology
Sequence Analysis, DNA
Severe acute respiratory syndrome coronavirus 2
Software
Thermal cycling
Tropism
vientovirus
Vietnam - epidemiology
Viral Zoonoses - epidemiology
Viral Zoonoses - transmission
Virus Shedding
Viruses
Young Adult
Zoonoses
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Title Redondoviridae : High Prevalence and Possibly Chronic Shedding in Human Respiratory Tract, But No Zoonotic Transmission
URI https://www.ncbi.nlm.nih.gov/pubmed/33804837
https://www.proquest.com/docview/2528260051
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https://pubmed.ncbi.nlm.nih.gov/PMC8063800
https://doaj.org/article/242e15bbed9346338f729e2b0c929106
Volume 13
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