Evolutionary histories of coxsackievirus B5 and swine vesicular disease virus reconstructed by phylodynamic and sequence variation analyses

• Published in: Scientific reports Vol. 8; no. 1; pp. 8821 - 12
• Main Authors: Huang, Hui-Wen, Chu, Pei-Huan, Pan, Chu-Hsiang, Wang, Chu-Feng, Lin, Chien-Ching, Lu, Po-Liang, Chen, Yao-Shen, Shi, Yong-Ying, Su, Hui-Ju, Chou, Li-Chiu, Lin, Yi-Ying, Lee, Hsiao-Fen, Chen, Bao-Chen, Huang, Tsi-Shu, Tyan, Yu-Chang, Chuang, Chih-Hung, Yen, Yung-Chang, Chu, Pei-Yu
• Format: Journal Article
• Language: English
• Published: England Nature Publishing Group 11.06.2018; Nature Publishing Group UK
• Subjects: Bayesian analysis; Coxsackieviruses; Datasets; Dengue fever; Disease; Epidemics; Epistasis; Genotype & phenotype; Genotypes; Haplotypes; Hogs; Hospitals; Host alternation; Infections; Internal medicine; Laboratories; Medical research; Medicine; Mutation; Proteins; RNA polymerase; Surveillance; Swine vesicular disease; Tropism; Viruses; VP1 protein

Coxsackievirus (CV)-B5 is a common human enterovirus reported worldwide; swine vesicular disease virus (SVDV) is a porcine variant of CV-B5. To clarify the transmission dynamics and molecular basis of host switching between CV-B5 and SVDV, we analysed and compared the VP1 and partial 3D gene regions...