Accuracy and limitations for spectroscopic prediction of leaf traits in seasonally dry tropical environments

Generalized assessments of the accuracy of spectroscopic estimates of ecologically important leaf traits such as leaf mass per area (LMA) and leaf dry matter content (LDMC) are still lacking for most ecosystems, and particularly for non-forested and/or seasonally dry tropical vegetation. Here, we te...

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Published inRemote sensing of environment Vol. 244; p. 111828
Main Authors Streher, Annia Susin, Torres, Ricardo da Silva, Morellato, Leonor Patrícia Cerdeira, Silva, Thiago Sanna Freire
Format Journal Article
LanguageEnglish
Published New York Elsevier Inc 01.07.2020
Elsevier BV
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Abstract Generalized assessments of the accuracy of spectroscopic estimates of ecologically important leaf traits such as leaf mass per area (LMA) and leaf dry matter content (LDMC) are still lacking for most ecosystems, and particularly for non-forested and/or seasonally dry tropical vegetation. Here, we tested the ability of using leaf reflectance spectra to estimate LMA and LDMC and classify plant growth forms within the cerrado and campo rupestre seasonally dry non-forest vegetation types of Southeastern Brazil, filling an existing gap in published assessments of leaf optical properties and plant traits in such environments. We measured leaf reflectance spectra from 1648 individual plants comprising grasses, herbs, shrubs, and trees, developed partial least squares regression (PLSR) models linking LMA and LDMC to leaf spectra (400–2500 nm), and identified the spectral regions with the greatest discriminatory power among growth forms using Bhattacharyya distances. We accurately predicted leaf functional traits and identified different growth forms. LMA was overall more accurately predicted (RMSE = 8.58%) than LDMC (RMSE = 9.75%). Our model including all sampled plants was not biased towards any particular growth form, but growth-form specific models yielded higher accuracies and showed that leaf traits from woody plants can be more accurately estimated than for grasses and forbs, independently of the trait measured. We observed a large range of LMA values (31.80–620.81 g/m2) rarely observed in tropical or temperate forests, and demonstrated that values above 300 g/m2 could not be accurately estimated. Our results suggest that spectroscopy may have an intrinsic saturation point, and/or that PLSR, the current approach of choice for estimating traits from plant spectra, is not able to model the entire range of LMA values. This finding has very important implications to our ability to use field, airborne, and orbital spectroscopic methods to derive generalizable functional information. We thus highlight the need for increasing spectroscopic sampling and research efforts in drier non-forested environments, where environmental pressures lead to leaf adaptations and allocation strategies that are very different from forested ecosystems. Our findings also confirm that leaf reflectance spectra can provide important information regarding differences in leaf metabolism, structure, and chemical composition. Such information enabled us to accurately discriminate plant growth forms in these environments regardless of lack of variation in leaf economic traits, encouraging further adoption of remote sensing methods by ecologists and allowing a more comprehensive assessment of plant functional diversity. •We measured spectra and leaf traits for an understudied dry tropical grassland;•We could not accurately predict LMA values >300 g/m2 from spectral data•We could infer plant lifeform from spectra despite absence of leaf trait differences•These key findings have seldom been studied due to biases towards humid forests
AbstractList Generalized assessments of the accuracy of spectroscopic estimates of ecologically important leaf traits such as leaf mass per area (LMA) and leaf dry matter content (LDMC) are still lacking for most ecosystems, and particularly for non-forested and/or seasonally dry tropical vegetation. Here, we tested the ability of using leaf reflectance spectra to estimate LMA and LDMC and classify plant growth forms within the cerrado and campo rupestre seasonally dry non-forest vegetation types of Southeastern Brazil, filling an existing gap in published assessments of leaf optical properties and plant traits in such environments. We measured leaf reflectance spectra from 1648 individual plants comprising grasses, herbs, shrubs, and trees, developed partial least squares regression (PLSR) models linking LMA and LDMC to leaf spectra (400–2500 nm), and identified the spectral regions with the greatest discriminatory power among growth forms using Bhattacharyya distances. We accurately predicted leaf functional traits and identified different growth forms. LMA was overall more accurately predicted (RMSE = 8.58%) than LDMC (RMSE = 9.75%). Our model including all sampled plants was not biased towards any particular growth form, but growth-form specific models yielded higher accuracies and showed that leaf traits from woody plants can be more accurately estimated than for grasses and forbs, independently of the trait measured. We observed a large range of LMA values (31.80–620.81 g/m2) rarely observed in tropical or temperate forests, and demonstrated that values above 300 g/m2 could not be accurately estimated. Our results suggest that spectroscopy may have an intrinsic saturation point, and/or that PLSR, the current approach of choice for estimating traits from plant spectra, is not able to model the entire range of LMA values. This finding has very important implications to our ability to use field, airborne, and orbital spectroscopic methods to derive generalizable functional information. We thus highlight the need for increasing spectroscopic sampling and research efforts in drier non-forested environments, where environmental pressures lead to leaf adaptations and allocation strategies that are very different from forested ecosystems. Our findings also confirm that leaf reflectance spectra can provide important information regarding differences in leaf metabolism, structure, and chemical composition. Such information enabled us to accurately discriminate plant growth forms in these environments regardless of lack of variation in leaf economic traits, encouraging further adoption of remote sensing methods by ecologists and allowing a more comprehensive assessment of plant functional diversity. •We measured spectra and leaf traits for an understudied dry tropical grassland;•We could not accurately predict LMA values >300 g/m2 from spectral data•We could infer plant lifeform from spectra despite absence of leaf trait differences•These key findings have seldom been studied due to biases towards humid forests
Generalized assessments of the accuracy of spectroscopic estimates of ecologically important leaf traits such as leaf mass per area (LMA) and leaf dry matter content (LDMC) are still lacking for most ecosystems, and particularly for non-forested and/or seasonally dry tropical vegetation. Here, we tested the ability of using leaf reflectance spectra to estimate LMA and LDMC and classify plant growth forms within the cerrado and campo rupestre seasonally dry non-forest vegetation types of Southeastern Brazil, filling an existing gap in published assessments of leaf optical properties and plant traits in such environments. We measured leaf reflectance spectra from 1648 individual plants comprising grasses, herbs, shrubs, and trees, developed partial least squares regression (PLSR) models linking LMA and LDMC to leaf spectra (400–2500 nm), and identified the spectral regions with the greatest discriminatory power among growth forms using Bhattacharyya distances. We accurately predicted leaf functional traits and identified different growth forms. LMA was overall more accurately predicted (RMSE = 8.58%) than LDMC (RMSE = 9.75%). Our model including all sampled plants was not biased towards any particular growth form, but growth-form specific models yielded higher accuracies and showed that leaf traits from woody plants can be more accurately estimated than for grasses and forbs, independently of the trait measured. We observed a large range of LMA values (31.80–620.81 g/m²) rarely observed in tropical or temperate forests, and demonstrated that values above 300 g/m² could not be accurately estimated. Our results suggest that spectroscopy may have an intrinsic saturation point, and/or that PLSR, the current approach of choice for estimating traits from plant spectra, is not able to model the entire range of LMA values. This finding has very important implications to our ability to use field, airborne, and orbital spectroscopic methods to derive generalizable functional information. We thus highlight the need for increasing spectroscopic sampling and research efforts in drier non-forested environments, where environmental pressures lead to leaf adaptations and allocation strategies that are very different from forested ecosystems. Our findings also confirm that leaf reflectance spectra can provide important information regarding differences in leaf metabolism, structure, and chemical composition. Such information enabled us to accurately discriminate plant growth forms in these environments regardless of lack of variation in leaf economic traits, encouraging further adoption of remote sensing methods by ecologists and allowing a more comprehensive assessment of plant functional diversity.
Generalized assessments of the accuracy of spectroscopic estimates of ecologically important leaf traits such as leaf mass per area (LMA) and leaf dry matter content (LDMC) are still lacking for most ecosystems, and particularly for non-forested and/or seasonally dry tropical vegetation. Here, we tested the ability of using leaf reflectance spectra to estimate LMA and LDMC and classify plant growth forms within the cerrado and campo rupestre seasonally dry non-forest vegetation types of Southeastern Brazil, filling an existing gap in published assessments of leaf optical properties and plant traits in such environments. We measured leaf reflectance spectra from 1648 individual plants comprising grasses, herbs, shrubs, and trees, developed partial least squares regression (PLSR) models linking LMA and LDMC to leaf spectra (400–2500 nm), and identified the spectral regions with the greatest discriminatory power among growth forms using Bhattacharyya distances. We accurately predicted leaf functional traits and identified different growth forms. LMA was overall more accurately predicted (RMSE = 8.58%) than LDMC (RMSE = 9.75%). Our model including all sampled plants was not biased towards any particular growth form, but growth-form specific models yielded higher accuracies and showed that leaf traits from woody plants can be more accurately estimated than for grasses and forbs, independently of the trait measured. We observed a large range of LMA values (31.80–620.81 g/m2) rarely observed in tropical or temperate forests, and demonstrated that values above 300 g/m2 could not be accurately estimated. Our results suggest that spectroscopy may have an intrinsic saturation point, and/or that PLSR, the current approach of choice for estimating traits from plant spectra, is not able to model the entire range of LMA values. This finding has very important implications to our ability to use field, airborne, and orbital spectroscopic methods to derive generalizable functional information. We thus highlight the need for increasing spectroscopic sampling and research efforts in drier non-forested environments, where environmental pressures lead to leaf adaptations and allocation strategies that are very different from forested ecosystems. Our findings also confirm that leaf reflectance spectra can provide important information regarding differences in leaf metabolism, structure, and chemical composition. Such information enabled us to accurately discriminate plant growth forms in these environments regardless of lack of variation in leaf economic traits, encouraging further adoption of remote sensing methods by ecologists and allowing a more comprehensive assessment of plant functional diversity.
ArticleNumber 111828
Author Streher, Annia Susin
Torres, Ricardo da Silva
Morellato, Leonor Patrícia Cerdeira
Silva, Thiago Sanna Freire
Author_xml – sequence: 1
  givenname: Annia Susin
  orcidid: 0000-0002-9276-7289
  surname: Streher
  fullname: Streher, Annia Susin
  email: annia.streher@gmail.com
  organization: Universidade Estadual Paulista (Unesp), Instituto de Biociências, Departamento de Biodiversidade, Rio Claro, São Paulo, Brazil
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  givenname: Ricardo da Silva
  surname: Torres
  fullname: Torres, Ricardo da Silva
  organization: Department of ICT and Natural Sciences, NTNU - Norwegian University of Science and Technology, Ålesund, Norway
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  givenname: Leonor Patrícia Cerdeira
  surname: Morellato
  fullname: Morellato, Leonor Patrícia Cerdeira
  organization: Universidade Estadual Paulista (Unesp), Instituto de Biociências, Departamento de Biodiversidade, Phenology Lab, Rio Claro, São Paulo, Brazil
– sequence: 4
  givenname: Thiago Sanna Freire
  surname: Silva
  fullname: Silva, Thiago Sanna Freire
  organization: Biological and Environmental Sciences, Faculty of Natural Resources, University of Stirling. Stirling, UK, FK9 4LA
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Keywords Leaf spectroscopy
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Plant functional traits, campo rupestre
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LDMC
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Snippet Generalized assessments of the accuracy of spectroscopic estimates of ecologically important leaf traits such as leaf mass per area (LMA) and leaf dry matter...
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SubjectTerms Adaptation
Assessments
Brazil
Cerrado
Chemical composition
Dry matter
Ecosystems
Forbs
Forest ecosystems
Forest vegetation
Forests
functional diversity
Grasses
herbs
LDMC
leaf dry matter content
leaf reflectance
Leaf spectroscopy
least squares
Leaves
LMA
metabolism
Model accuracy
Optical properties
Partial least squares regression (PLSR)
Plant diversity
Plant functional traits, campo rupestre
Plant growth
prediction
Reflectance
reflectance spectroscopy
Regression analysis
Remote sensing
Shrubs
specific leaf weight
Spectra
Spectroscopy
Spectrum analysis
Temperate forests
trees
Tropical environment
Tropical environments
Vegetation
Woody plants
Title Accuracy and limitations for spectroscopic prediction of leaf traits in seasonally dry tropical environments
URI https://dx.doi.org/10.1016/j.rse.2020.111828
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https://www.proquest.com/docview/2431880819
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