Prevalence and characterization of Clostridioides difficile isolates from retail food products (vegetables and meats) in Japan

The present study aimed to elucidate the prevalence of Clostridioides difficile in Japanese retail food products. For this purpose, retail food samples (242 fresh vegetables and 266 retail meat samples: 89 chicken meat; 28 chicken liver; 200 pork meat; 24 pig liver; 127 beef meat) were collected fro...

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Published inAnaerobe Vol. 61; p. 102132
Main Authors Usui, Masaru, Maruko, Aika, Harada, Michiko, Kawabata, Fumi, Sudo, Tsubasa, Noto, Sayo, Sato, Toyotaka, Shinagawa, Masaaki, Takahashi, Satoshi, Tamura, Yutaka
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LanguageEnglish
Published England Elsevier Ltd 01.02.2020
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Abstract The present study aimed to elucidate the prevalence of Clostridioides difficile in Japanese retail food products. For this purpose, retail food samples (242 fresh vegetables and 266 retail meat samples: 89 chicken meat; 28 chicken liver; 200 pork meat; 24 pig liver; 127 beef meat) were collected from 14 supermarkets between 2015 and 2019. C. difficile was isolated from eight (3.3%) fresh vegetable, six (6.7%) chicken meat, one (3.6%) chicken liver, one (0.5%) pork meat, and two (1.6%) beef meat samples; it was not isolated from pig liver. Of these isolates, 35% were toxigenic. All isolates were typable by PCR ribotyping and were resolved into 12 PCR ribotypes. Among these isolates, ribotype 014, which is distributed worldwide including in Japanese clinical cases, was detected among vegetable isolates. Therefore, although the C. difficile contamination rate in Japanese retail foods was low, these sources can be contaminated and could transmit these bacteria to humans. •We clarified that C. difficile is prevalent in retail foods, in Japan.•There was a positive ratio of C. difficile in retail foods in Japan.•Ribotype 014 was found in some Japanese food products.•Therefore, we suggest efficiently washing vegetables and heating meats before eating.
AbstractList The present study aimed to elucidate the prevalence of Clostridioides difficile in Japanese retail food products. For this purpose, retail food samples (242 fresh vegetables and 266 retail meat samples: 89 chicken meat; 28 chicken liver; 200 pork meat; 24 pig liver; 127 beef meat) were collected from 14 supermarkets between 2015 and 2019. C. difficile was isolated from eight (3.3%) fresh vegetable, six (6.7%) chicken meat, one (3.6%) chicken liver, one (0.5%) pork meat, and two (1.6%) beef meat samples; it was not isolated from pig liver. Of these isolates, 35% were toxigenic. All isolates were typable by PCR ribotyping and were resolved into 12 PCR ribotypes. Among these isolates, ribotype 014, which is distributed worldwide including in Japanese clinical cases, was detected among vegetable isolates. Therefore, although the C. difficile contamination rate in Japanese retail foods was low, these sources can be contaminated and could transmit these bacteria to humans. •We clarified that C. difficile is prevalent in retail foods, in Japan.•There was a positive ratio of C. difficile in retail foods in Japan.•Ribotype 014 was found in some Japanese food products.•Therefore, we suggest efficiently washing vegetables and heating meats before eating.
The present study aimed to elucidate the prevalence of Clostridioides difficile in Japanese retail food products. For this purpose, retail food samples (242 fresh vegetables and 266 retail meat samples: 89 chicken meat; 28 chicken liver; 200 pork meat; 24 pig liver; 127 beef meat) were collected from 14 supermarkets between 2015 and 2019. C. difficile was isolated from eight (3.3%) fresh vegetable, six (6.7%) chicken meat, one (3.6%) chicken liver, one (0.5%) pork meat, and two (1.6%) beef meat samples; it was not isolated from pig liver. Of these isolates, 35% were toxigenic. All isolates were typable by PCR ribotyping and were resolved into 12 PCR ribotypes. Among these isolates, ribotype 014, which is distributed worldwide including in Japanese clinical cases, was detected among vegetable isolates. Therefore, although the C. difficile contamination rate in Japanese retail foods was low, these sources can be contaminated and could transmit these bacteria to humans.The present study aimed to elucidate the prevalence of Clostridioides difficile in Japanese retail food products. For this purpose, retail food samples (242 fresh vegetables and 266 retail meat samples: 89 chicken meat; 28 chicken liver; 200 pork meat; 24 pig liver; 127 beef meat) were collected from 14 supermarkets between 2015 and 2019. C. difficile was isolated from eight (3.3%) fresh vegetable, six (6.7%) chicken meat, one (3.6%) chicken liver, one (0.5%) pork meat, and two (1.6%) beef meat samples; it was not isolated from pig liver. Of these isolates, 35% were toxigenic. All isolates were typable by PCR ribotyping and were resolved into 12 PCR ribotypes. Among these isolates, ribotype 014, which is distributed worldwide including in Japanese clinical cases, was detected among vegetable isolates. Therefore, although the C. difficile contamination rate in Japanese retail foods was low, these sources can be contaminated and could transmit these bacteria to humans.
The present study aimed to elucidate the prevalence of Clostridioides difficile in Japanese retail food products. For this purpose, retail food samples (242 fresh vegetables and 266 retail meat samples: 89 chicken meat; 28 chicken liver; 200 pork meat; 24 pig liver; 127 beef meat) were collected from 14 supermarkets between 2015 and 2019. C. difficile was isolated from eight (3.3%) fresh vegetable, six (6.7%) chicken meat, one (3.6%) chicken liver, one (0.5%) pork meat, and two (1.6%) beef meat samples; it was not isolated from pig liver. Of these isolates, 35% were toxigenic. All isolates were typable by PCR ribotyping and were resolved into 12 PCR ribotypes. Among these isolates, ribotype 014, which is distributed worldwide including in Japanese clinical cases, was detected among vegetable isolates. Therefore, although the C. difficile contamination rate in Japanese retail foods was low, these sources can be contaminated and could transmit these bacteria to humans.
The present study aimed to elucidate the prevalence of Clostridioides difficile in Japanese retail food products. For this purpose, retail food samples (242 fresh vegetables and 266 retail meat samples: 89 chicken meat; 28 chicken liver; 200 pork meat; 24 pig liver; 127 beef meat) were collected from 14 supermarkets between 2015 and 2019. C. difficile was isolated from eight (3.3%) fresh vegetable, six (6.7%) chicken meat, one (3.6%) chicken liver, one (0.5%) pork meat, and two (1.6%) beef meat samples; it was not isolated from pig liver. Of these isolates, 35% were toxigenic. All isolates were typable by PCR ribotyping and were resolved into 12 PCR ribotypes. Among these isolates, ribotype 014, which is distributed worldwide including in Japanese clinical cases, was detected among vegetable isolates. Therefore, although the C. difficile contamination rate in Japanese retail foods was low, these sources can be contaminated and could transmit these bacteria to humans.
ArticleNumber 102132
Author Shinagawa, Masaaki
Maruko, Aika
Sato, Toyotaka
Harada, Michiko
Takahashi, Satoshi
Sudo, Tsubasa
Usui, Masaru
Noto, Sayo
Kawabata, Fumi
Tamura, Yutaka
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  fullname: Sato, Toyotaka
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  fullname: Takahashi, Satoshi
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  givenname: Yutaka
  surname: Tamura
  fullname: Tamura, Yutaka
  organization: Laboratory of Food Microbiology and Food Safety, Department of Health and Environmental Sciences, School of Veterinary Medicine, Rakuno Gakuen University, Ebetsu, Hokkaido, Japan
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Cites_doi 10.3201/eid1303.060988
10.1016/j.fm.2018.10.017
10.1099/00222615-45-2-133
10.1093/jac/dkv220
10.1111/j.1348-0421.2002.tb02706.x
10.1128/JCM.05161-11
10.1128/AEM.03951-12
10.1128/JCM.02083-15
10.1111/j.1469-0691.2008.02092.x
10.1128/CMR.18.2.247-263.2005
10.1007/s10096-007-0355-8
10.1111/j.1469-0691.2012.03853.x
10.1099/jmm.0.000149
10.1016/j.fm.2018.08.012
10.1128/CMR.00082-09
10.1007/5584_2016_27
10.3201/eid1505.081084
10.1016/j.cmi.2017.10.008
10.1128/JCM.05588-11
10.3201/eid1211.051581
10.1016/j.jiac.2015.09.004
10.1111/jam.13653
10.1111/j.1574-6968.2000.tb09122.x
10.1016/j.anaerobe.2010.09.002
10.1111/j.1469-0691.2007.01793.x
10.1002/nmi2.43
10.1016/S0140-6736(10)61266-4
10.1007/978-3-319-72799-8_13
10.1016/j.anaerobe.2013.10.004
10.1016/j.anaerobe.2016.11.004
10.1111/j.1469-0691.2009.03108.x
10.12935/jvma.71.261
10.1111/j.1472-765X.2010.02933.x
10.1186/2047-2994-2-21
10.1086/521863
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Keywords Retail food
Clostridioides difficile
Toxinotype XIb
Vegetables
Ribotype 014
Meat
Language English
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References Knight, Giglio, Huntington, Korman, Kotsanas, Moore (bib31) 2015; 70
Clinical and Laboratory Standards Institute (CLSI) (bib25) 2007; vol. 27
Rodriguez-Palacios, Reid-Smith, Staempfli, Daignault, Janecko, Avery (bib28) 2009; 15
Weese (bib9) 2010; 16
Oka, Osaki, Hanawa, Kurata, Okazaki, Manzoku (bib21) 2012; 50
Paltansing, van den Berg, Guseinova, Visser, van der Vorm, Kuijper (bib22) 2007; 13
Usui, Harada, Kawabata, Sato, Higuchi, Tamura (bib26) 2018; 71
Bauer, Notermans, van Benthem, Brazier, Wilcox, Rupnik (bib27) 2011; 377
Freeman, Vernon, Pilling, Morris, Nicholson, Shearman (bib29) 2018; 24
Rupnic, Sandra (bib33) 2016; 54
Sawabe, Kato, Osawa, Chida, Tojo, Arakawa (bib3) 2007; 26
Voth, Ballard (bib5) 2005; 18
Bartlett, Gerding (bib36) 2008; 46
Tkalec, Janezic, Skok, Simonic, Mesaric, Vrabic (bib15) 2019; 78
Hensgens, Keessen, Squire, Riley, Koene, de Boer (bib8) 2012; 18
Metcalf, Costa, Dew, Weese (bib14) 2010; 51
Candel-Perez, Ros-Berruezo, Martinez-Gracia (bib10) 2019; 77
Persson, Jensen, Olsen (bib23) 2011; 49
Huang, Weintraub, Fang, Wu, Zhang, Nord (bib37) 2010; 16
Rodriguez-Palacios, Staempfli, Duffield, Weese (bib19) 2007; 13
Knight, Thean, Putsathit, Fenwick, Riley (bib35) 2013; 79
Centers for Disease Control and Prevention (bib1) 2013
Lim, Foster, Elliott, Riley (bib16) 2018; 124
Usui, Kawakura, Yoshizawa, San, Nakajima, Suzuki (bib12) 2017; 43
Collins, Hawkey, Riley (bib18) 2013; 2
Senoh, Kato, Fukuda, Niikawa, Hori, Hagiya (bib4) 2015; 64
al Saif, Brazier (bib13) 1996; 45
Rodriguez, Taminiau, Van Broeck, Delmee, Daube (bib7) 2016; 932
Freeman, Bauer, Baines, Corver, Fawley, Goorhuis (bib6) 2010; 23
Kikuchi, Miyamoto, Narushima, Itoh (bib20) 2002; 46
Mori, Aoki (bib17) 2015; 21
Rodriguez-Palacios, Stampfli, Duffield, Peregrine, Trotz-Williams, Arroyo (bib32) 2006; 12
Honda, Yamazaki, Sato, Dubberke (bib2) 2014; 25
Foster, Collins, Ditchburn, Duncan, van Schalkwyk, Golledge (bib30) 2014; 2
Rodriguez Diaz, Seyboldt, Rupnik (bib11) 2018; 1050
Persson, Torpdahl, Olsen (bib24) 2008; 14
Stubbs, Rupnik, Gibert, Brazier, Duerden, Popoff (bib34) 2000; 186
Bauer (10.1016/j.anaerobe.2019.102132_bib27) 2011; 377
Sawabe (10.1016/j.anaerobe.2019.102132_bib3) 2007; 26
Weese (10.1016/j.anaerobe.2019.102132_bib9) 2010; 16
Persson (10.1016/j.anaerobe.2019.102132_bib23) 2011; 49
Collins (10.1016/j.anaerobe.2019.102132_bib18) 2013; 2
Metcalf (10.1016/j.anaerobe.2019.102132_bib14) 2010; 51
Tkalec (10.1016/j.anaerobe.2019.102132_bib15) 2019; 78
Rodriguez (10.1016/j.anaerobe.2019.102132_bib7) 2016; 932
Usui (10.1016/j.anaerobe.2019.102132_bib26) 2018; 71
Rodriguez-Palacios (10.1016/j.anaerobe.2019.102132_bib32) 2006; 12
Rodriguez Diaz (10.1016/j.anaerobe.2019.102132_bib11) 2018; 1050
Honda (10.1016/j.anaerobe.2019.102132_bib2) 2014; 25
Centers for Disease Control and Prevention (10.1016/j.anaerobe.2019.102132_bib1)
Knight (10.1016/j.anaerobe.2019.102132_bib35) 2013; 79
Knight (10.1016/j.anaerobe.2019.102132_bib31) 2015; 70
Foster (10.1016/j.anaerobe.2019.102132_bib30) 2014; 2
al Saif (10.1016/j.anaerobe.2019.102132_bib13) 1996; 45
Rodriguez-Palacios (10.1016/j.anaerobe.2019.102132_bib19) 2007; 13
Mori (10.1016/j.anaerobe.2019.102132_bib17) 2015; 21
Usui (10.1016/j.anaerobe.2019.102132_bib12) 2017; 43
Lim (10.1016/j.anaerobe.2019.102132_bib16) 2018; 124
Voth (10.1016/j.anaerobe.2019.102132_bib5) 2005; 18
Rupnic (10.1016/j.anaerobe.2019.102132_bib33) 2016; 54
Senoh (10.1016/j.anaerobe.2019.102132_bib4) 2015; 64
Freeman (10.1016/j.anaerobe.2019.102132_bib6) 2010; 23
Paltansing (10.1016/j.anaerobe.2019.102132_bib22) 2007; 13
Rodriguez-Palacios (10.1016/j.anaerobe.2019.102132_bib28) 2009; 15
Freeman (10.1016/j.anaerobe.2019.102132_bib29) 2018; 24
Persson (10.1016/j.anaerobe.2019.102132_bib24) 2008; 14
Stubbs (10.1016/j.anaerobe.2019.102132_bib34) 2000; 186
Candel-Perez (10.1016/j.anaerobe.2019.102132_bib10) 2019; 77
Kikuchi (10.1016/j.anaerobe.2019.102132_bib20) 2002; 46
Huang (10.1016/j.anaerobe.2019.102132_bib37) 2010; 16
Hensgens (10.1016/j.anaerobe.2019.102132_bib8) 2012; 18
Oka (10.1016/j.anaerobe.2019.102132_bib21) 2012; 50
Bartlett (10.1016/j.anaerobe.2019.102132_bib36) 2008; 46
Clinical and Laboratory Standards Institute (CLSI) (10.1016/j.anaerobe.2019.102132_bib25) 2007; vol. 27
References_xml – volume: 13
  start-page: 1058
  year: 2007
  end-page: 1064
  ident: bib22
  article-title: Characteristics and incidence of
  publication-title: Clin. Microbiol. Infect.
– volume: 186
  start-page: 307
  year: 2000
  end-page: 312
  ident: bib34
  article-title: Production of actin-specific ADP-ribosyltransferase (binary toxin) by strains of
  publication-title: FEMS Microbiol. Lett.
– volume: 46
  start-page: 353
  year: 2002
  end-page: 358
  ident: bib20
  article-title: Design of species-specific primers to identify 13 species of
  publication-title: Microbiol. Immunol.
– volume: vol. 27
  year: 2007
  ident: bib25
  publication-title: Methods for Antimicrobial Susceptibility Testing of Anaerobic Bacteria; Approved Standard
– volume: 12
  start-page: 1730
  year: 2006
  end-page: 1736
  ident: bib32
  article-title: PCR ribotypes in calves, Canada
  publication-title: Emerg. Infect. Dis.
– volume: 124
  start-page: 585
  year: 2018
  end-page: 590
  ident: bib16
  article-title: High prevalence of
  publication-title: J. Appl. Microbiol.
– volume: 21
  start-page: 864
  year: 2015
  end-page: 867
  ident: bib17
  article-title: Clinical characteristics and risk factors for community-acquired
  publication-title: J. Infect. Chemother.
– volume: 16
  start-page: 3
  year: 2010
  end-page: 10
  ident: bib9
  article-title: in food--innocent bystander or serious threat?
  publication-title: Clin. Microbiol. Infect.
– volume: 64
  start-page: 1226
  year: 2015
  end-page: 1236
  ident: bib4
  article-title: Predominance of PCR-ribotypes, 018 (
  publication-title: J. Med. Microbiol.
– volume: 23
  start-page: 529
  year: 2010
  end-page: 549
  ident: bib6
  article-title: The changing epidemiology of
  publication-title: Clin. Microbiol. Rev.
– volume: 18
  start-page: 635
  year: 2012
  end-page: 645
  ident: bib8
  article-title: infection in the community: a zoonotic disease?
  publication-title: Clin. Microbiol. Infect.
– volume: 77
  start-page: 118
  year: 2019
  end-page: 129
  ident: bib10
  article-title: A review of
  publication-title: Food Microbiol.
– volume: 78
  start-page: 194
  year: 2019
  end-page: 200
  ident: bib15
  article-title: High
  publication-title: Food Microbiol.
– volume: 79
  start-page: 2630
  year: 2013
  end-page: 2635
  ident: bib35
  article-title: Cross-sectional study reveals high prevalence of
  publication-title: Appl. Environ. Microbiol.
– year: 2013
  ident: bib1
  article-title: US department of health and human services. Antibiotic resistance threats in the United States
– volume: 50
  start-page: 915
  year: 2012
  end-page: 921
  ident: bib21
  article-title: Molecular and microbiological characterization of
  publication-title: J. Clin. Microbiol.
– volume: 15
  start-page: 802
  year: 2009
  end-page: 805
  ident: bib28
  article-title: Possible seasonality of
  publication-title: Emerg. Infect. Dis.
– volume: 14
  start-page: 1057
  year: 2008
  end-page: 1064
  ident: bib24
  article-title: New multiplex PCR method for the detection of
  publication-title: Clin. Microbiol. Infect.
– volume: 43
  start-page: 15
  year: 2017
  end-page: 20
  ident: bib12
  article-title: Survival and prevalence of
  publication-title: Anaerobe
– volume: 51
  start-page: 600
  year: 2010
  end-page: 602
  ident: bib14
  article-title: in vegetables, Canada
  publication-title: Lett. Appl. Microbiol.
– volume: 1050
  start-page: 227
  year: 2018
  end-page: 243
  ident: bib11
  article-title: Non-human
  publication-title: Adv. Exp. Med. Biol.
– volume: 16
  start-page: 633
  year: 2010
  end-page: 635
  ident: bib37
  article-title: Antimicrobial susceptibility and heteroresistance in Chinese
  publication-title: Anaerobe
– volume: 54
  start-page: 13
  year: 2016
  end-page: 18
  ident: bib33
  article-title: An update on
  publication-title: J. Clin. Microbiol.
– volume: 13
  start-page: 485
  year: 2007
  end-page: 487
  ident: bib19
  article-title: in retail ground meat, Canada
  publication-title: Emerg. Infect. Dis.
– volume: 377
  start-page: 63
  year: 2011
  end-page: 73
  ident: bib27
  article-title: infection in Europe: a hospital-based survey
  publication-title: Lancet
– volume: 2
  start-page: 64
  year: 2014
  end-page: 71
  ident: bib30
  article-title: Epidemiology of
  publication-title: New Microbes New Infect
– volume: 932
  start-page: 65
  year: 2016
  end-page: 92
  ident: bib7
  article-title: in food and animals: a comprehensive review
  publication-title: Adv. Exp. Med. Biol.
– volume: 2
  start-page: 21
  year: 2013
  ident: bib18
  article-title: Epidemiology of
  publication-title: Antimicrob. Resist. Infect. Contr.
– volume: 71
  start-page: 261
  year: 2018
  end-page: 265
  ident: bib26
  article-title: Prevalence of
  publication-title: J. Jpn. Vet. Med. Assoc.
– volume: 70
  start-page: 2992
  year: 2015
  end-page: 2999
  ident: bib31
  article-title: Surveillance for antimicrobial resistance in Australian isolates of
  publication-title: J. Antimicrob. Chemother.
– volume: 45
  start-page: 133
  year: 1996
  end-page: 137
  ident: bib13
  article-title: The distribution of
  publication-title: J. Med. Microbiol.
– volume: 46
  start-page: S12
  year: 2008
  end-page: S18
  ident: bib36
  article-title: Clinical recognition and diagnosis of
  publication-title: Clin. Infect. Dis.
– volume: 25
  start-page: 5
  year: 2014
  end-page: 10
  ident: bib2
  article-title: Incidence and mortality associated with
  publication-title: Anaerobe
– volume: 24
  start-page: 724
  year: 2018
  end-page: 731
  ident: bib29
  article-title: The ClosER study: results from a three-year pan-European longitudinal surveillance of antibiotic resistance among prevalent
  publication-title: Clin. Microbiol. Infect.
– volume: 49
  start-page: 4299
  year: 2011
  end-page: 4300
  ident: bib23
  article-title: Multiplex PCR method for detection of
  publication-title: J. Clin. Microbiol.
– volume: 26
  start-page: 695
  year: 2007
  end-page: 703
  ident: bib3
  article-title: Molecular analysis of
  publication-title: Eur. J. Clin. Microbiol. Infect. Dis.
– volume: 18
  start-page: 247
  year: 2005
  end-page: 263
  ident: bib5
  article-title: toxins: mechanism of action and role in disease
  publication-title: Clin. Microbiol. Rev.
– volume: 13
  start-page: 485
  year: 2007
  ident: 10.1016/j.anaerobe.2019.102132_bib19
  article-title: Clostridium difficile in retail ground meat, Canada
  publication-title: Emerg. Infect. Dis.
  doi: 10.3201/eid1303.060988
– volume: 78
  start-page: 194
  year: 2019
  ident: 10.1016/j.anaerobe.2019.102132_bib15
  article-title: High Clostridium difficile contamination rates of domestic and imported potatoes compared to some other vegetables in Slovenia
  publication-title: Food Microbiol.
  doi: 10.1016/j.fm.2018.10.017
– volume: 45
  start-page: 133
  year: 1996
  ident: 10.1016/j.anaerobe.2019.102132_bib13
  article-title: The distribution of Clostridium difficile in the environment of South Wales
  publication-title: J. Med. Microbiol.
  doi: 10.1099/00222615-45-2-133
– volume: 70
  start-page: 2992
  year: 2015
  ident: 10.1016/j.anaerobe.2019.102132_bib31
  article-title: Surveillance for antimicrobial resistance in Australian isolates of Clostridium difficile, 2013-14
  publication-title: J. Antimicrob. Chemother.
  doi: 10.1093/jac/dkv220
– volume: 46
  start-page: 353
  year: 2002
  ident: 10.1016/j.anaerobe.2019.102132_bib20
  article-title: Design of species-specific primers to identify 13 species of Clostridium harbored in human intestinal tracts
  publication-title: Microbiol. Immunol.
  doi: 10.1111/j.1348-0421.2002.tb02706.x
– volume: 49
  start-page: 4299
  year: 2011
  ident: 10.1016/j.anaerobe.2019.102132_bib23
  article-title: Multiplex PCR method for detection of Clostridium difficile tcdA, tcdB, cdtA, and cdtB and internal in-frame deletion of tcdC
  publication-title: J. Clin. Microbiol.
  doi: 10.1128/JCM.05161-11
– volume: 79
  start-page: 2630
  year: 2013
  ident: 10.1016/j.anaerobe.2019.102132_bib35
  article-title: Cross-sectional study reveals high prevalence of Clostridium difficile non-PCR ribotype 078 strains in Australian veal calves at slaughter
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.03951-12
– volume: 54
  start-page: 13
  year: 2016
  ident: 10.1016/j.anaerobe.2019.102132_bib33
  article-title: An update on Clostridium difficile toxinotyping
  publication-title: J. Clin. Microbiol.
  doi: 10.1128/JCM.02083-15
– volume: 14
  start-page: 1057
  year: 2008
  ident: 10.1016/j.anaerobe.2019.102132_bib24
  article-title: New multiplex PCR method for the detection of Clostridium difficile toxin A (tcdA) and toxin B (tcdB) and the binary toxin (cdtA/cdtB) genes applied to a Danish strain collection
  publication-title: Clin. Microbiol. Infect.
  doi: 10.1111/j.1469-0691.2008.02092.x
– ident: 10.1016/j.anaerobe.2019.102132_bib1
– volume: 18
  start-page: 247
  year: 2005
  ident: 10.1016/j.anaerobe.2019.102132_bib5
  article-title: Clostridium difficile toxins: mechanism of action and role in disease
  publication-title: Clin. Microbiol. Rev.
  doi: 10.1128/CMR.18.2.247-263.2005
– volume: 26
  start-page: 695
  year: 2007
  ident: 10.1016/j.anaerobe.2019.102132_bib3
  article-title: Molecular analysis of Clostridium difficile at a university teaching hospital in Japan: a shift in the predominant type over a five-year period
  publication-title: Eur. J. Clin. Microbiol. Infect. Dis.
  doi: 10.1007/s10096-007-0355-8
– volume: 18
  start-page: 635
  year: 2012
  ident: 10.1016/j.anaerobe.2019.102132_bib8
  article-title: Clostridium difficile infection in the community: a zoonotic disease?
  publication-title: Clin. Microbiol. Infect.
  doi: 10.1111/j.1469-0691.2012.03853.x
– volume: 64
  start-page: 1226
  year: 2015
  ident: 10.1016/j.anaerobe.2019.102132_bib4
  article-title: Predominance of PCR-ribotypes, 018 (smz) and 369 (trf) of Clostridium difficile in Japan: a potential relationship with other global circulating strains?
  publication-title: J. Med. Microbiol.
  doi: 10.1099/jmm.0.000149
– volume: 77
  start-page: 118
  year: 2019
  ident: 10.1016/j.anaerobe.2019.102132_bib10
  article-title: A review of Clostridioides [Clostridium] difficile occurrence through the food chain
  publication-title: Food Microbiol.
  doi: 10.1016/j.fm.2018.08.012
– volume: 23
  start-page: 529
  year: 2010
  ident: 10.1016/j.anaerobe.2019.102132_bib6
  article-title: The changing epidemiology of Clostridium difficile infections
  publication-title: Clin. Microbiol. Rev.
  doi: 10.1128/CMR.00082-09
– volume: 932
  start-page: 65
  year: 2016
  ident: 10.1016/j.anaerobe.2019.102132_bib7
  article-title: Clostridium difficile in food and animals: a comprehensive review
  publication-title: Adv. Exp. Med. Biol.
  doi: 10.1007/5584_2016_27
– volume: 15
  start-page: 802
  year: 2009
  ident: 10.1016/j.anaerobe.2019.102132_bib28
  article-title: Possible seasonality of Clostridium difficile in retail meat, Canada
  publication-title: Emerg. Infect. Dis.
  doi: 10.3201/eid1505.081084
– volume: 24
  start-page: 724
  year: 2018
  ident: 10.1016/j.anaerobe.2019.102132_bib29
  article-title: The ClosER study: results from a three-year pan-European longitudinal surveillance of antibiotic resistance among prevalent Clostridium difficile ribotypes, 2011-2014
  publication-title: Clin. Microbiol. Infect.
  doi: 10.1016/j.cmi.2017.10.008
– volume: vol. 27
  year: 2007
  ident: 10.1016/j.anaerobe.2019.102132_bib25
– volume: 50
  start-page: 915
  year: 2012
  ident: 10.1016/j.anaerobe.2019.102132_bib21
  article-title: Molecular and microbiological characterization of Clostridium difficile isolates from single, relapse, and reinfection cases
  publication-title: J. Clin. Microbiol.
  doi: 10.1128/JCM.05588-11
– volume: 12
  start-page: 1730
  year: 2006
  ident: 10.1016/j.anaerobe.2019.102132_bib32
  article-title: Clostridium difficile PCR ribotypes in calves, Canada
  publication-title: Emerg. Infect. Dis.
  doi: 10.3201/eid1211.051581
– volume: 21
  start-page: 864
  year: 2015
  ident: 10.1016/j.anaerobe.2019.102132_bib17
  article-title: Clinical characteristics and risk factors for community-acquired Clostridium difficile infection: a retrospective, case-control study in a tertiary care hospital in Japan
  publication-title: J. Infect. Chemother.
  doi: 10.1016/j.jiac.2015.09.004
– volume: 124
  start-page: 585
  year: 2018
  ident: 10.1016/j.anaerobe.2019.102132_bib16
  article-title: High prevalence of Clostridium difficile on retail root vegetables, Western Australia
  publication-title: J. Appl. Microbiol.
  doi: 10.1111/jam.13653
– volume: 186
  start-page: 307
  year: 2000
  ident: 10.1016/j.anaerobe.2019.102132_bib34
  article-title: Production of actin-specific ADP-ribosyltransferase (binary toxin) by strains of Clostridium difficile
  publication-title: FEMS Microbiol. Lett.
  doi: 10.1111/j.1574-6968.2000.tb09122.x
– volume: 16
  start-page: 633
  year: 2010
  ident: 10.1016/j.anaerobe.2019.102132_bib37
  article-title: Antimicrobial susceptibility and heteroresistance in Chinese Clostridium difficile strains
  publication-title: Anaerobe
  doi: 10.1016/j.anaerobe.2010.09.002
– volume: 13
  start-page: 1058
  year: 2007
  ident: 10.1016/j.anaerobe.2019.102132_bib22
  article-title: Characteristics and incidence of Clostridium difficile-associated disease in The Netherlands, 2005
  publication-title: Clin. Microbiol. Infect.
  doi: 10.1111/j.1469-0691.2007.01793.x
– volume: 2
  start-page: 64
  year: 2014
  ident: 10.1016/j.anaerobe.2019.102132_bib30
  article-title: Epidemiology of Clostridium difficile infection in two tertiary-care hospitals in Perth, Western Australia: a cross-sectional study
  publication-title: New Microbes New Infect
  doi: 10.1002/nmi2.43
– volume: 377
  start-page: 63
  year: 2011
  ident: 10.1016/j.anaerobe.2019.102132_bib27
  article-title: Clostridium difficile infection in Europe: a hospital-based survey
  publication-title: Lancet
  doi: 10.1016/S0140-6736(10)61266-4
– volume: 1050
  start-page: 227
  year: 2018
  ident: 10.1016/j.anaerobe.2019.102132_bib11
  article-title: Non-human C. difficile reservoirs and sources; animals, food, environment
  publication-title: Adv. Exp. Med. Biol.
  doi: 10.1007/978-3-319-72799-8_13
– volume: 25
  start-page: 5
  year: 2014
  ident: 10.1016/j.anaerobe.2019.102132_bib2
  article-title: Incidence and mortality associated with Clostridium difficile infection at a Japanese tertiary care center
  publication-title: Anaerobe
  doi: 10.1016/j.anaerobe.2013.10.004
– volume: 43
  start-page: 15
  year: 2017
  ident: 10.1016/j.anaerobe.2019.102132_bib12
  article-title: Survival and prevalence of Clostridium difficile in manure compost derived from pigs
  publication-title: Anaerobe
  doi: 10.1016/j.anaerobe.2016.11.004
– volume: 16
  start-page: 3
  year: 2010
  ident: 10.1016/j.anaerobe.2019.102132_bib9
  article-title: Clostridium difficile in food--innocent bystander or serious threat?
  publication-title: Clin. Microbiol. Infect.
  doi: 10.1111/j.1469-0691.2009.03108.x
– volume: 71
  start-page: 261
  year: 2018
  ident: 10.1016/j.anaerobe.2019.102132_bib26
  article-title: Prevalence of Clostridium difficile in Japanese cows and calves
  publication-title: J. Jpn. Vet. Med. Assoc.
  doi: 10.12935/jvma.71.261
– volume: 51
  start-page: 600
  year: 2010
  ident: 10.1016/j.anaerobe.2019.102132_bib14
  article-title: Clostridium difficile in vegetables, Canada
  publication-title: Lett. Appl. Microbiol.
  doi: 10.1111/j.1472-765X.2010.02933.x
– volume: 2
  start-page: 21
  year: 2013
  ident: 10.1016/j.anaerobe.2019.102132_bib18
  article-title: Epidemiology of Clostridium difficile infection in asia
  publication-title: Antimicrob. Resist. Infect. Contr.
  doi: 10.1186/2047-2994-2-21
– volume: 46
  start-page: S12
  issue: Suppl 1
  year: 2008
  ident: 10.1016/j.anaerobe.2019.102132_bib36
  article-title: Clinical recognition and diagnosis of Clostridium difficile infection
  publication-title: Clin. Infect. Dis.
  doi: 10.1086/521863
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Snippet The present study aimed to elucidate the prevalence of Clostridioides difficile in Japanese retail food products. For this purpose, retail food samples (242...
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SubjectTerms bacteria
beef
chicken meat
chickens
Clostridioides difficile
Clostridium difficile
Japan
liver
Meat
polymerase chain reaction
pork
raw vegetables
Retail food
Ribotype 014
ribotypes
supermarkets
swine
Toxinotype XIb
Vegetables
Title Prevalence and characterization of Clostridioides difficile isolates from retail food products (vegetables and meats) in Japan
URI https://dx.doi.org/10.1016/j.anaerobe.2019.102132
https://www.ncbi.nlm.nih.gov/pubmed/31778810
https://www.proquest.com/docview/2320377004
https://www.proquest.com/docview/2388775919
Volume 61
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