A Pipeline for Phasing and Genotype Imputation on Mixed Human Data (Parents-Offspring Trios and Unrelated Subjects) by Reviewing Current Methods and Software - Baldrighi, Giulia Nicole; Nova, Andrea; Bernardinelli, Luisa; Fazia, Teresa (Life (Basel, Switzerland), 2022)
Keywords: Accuracy; Algorithms; Association analysis; Computer applications; Data mining; Ethnicity; Families & family life; Genetic markers; Genetic research; Genomes; Genotype; Genotype & phenotype; Genotypes; Haplotypes; Human genetics; imputation pipeline; LD-based method; Methods; mixed data; Multiple imputation (Statistics); Offspring; Open source software; Population; Review; Sample size; Single-nucleotide polymorphism; SNPs; Software; Statistical software; trios; unrelated subjects; Italy; mixed data; SNPs; unrelated subjects; imputation pipeline; LD-based method; trios