Molecular insights into 4-nitrophenol-induced hepatotoxicity in zebrafish: Transcriptomic, histological and targeted gene expression analyses

4-Nitrophenol (4-NP) is a prioritized environmental pollutant and its toxicity has been investigated using zebrafish, advocated as an alternative toxicological model. However, molecular information of 4-NP induced hepatotoxicity is still limited. This study aimed to obtain molecular insights into 4-...

Full description

Saved in:
Bibliographic Details
Published inBiochimica et biophysica acta Vol. 1830; no. 10; pp. 4778 - 4789
Main Authors Lam, Siew Hong, Ung, Choong Yong, Hlaing, Mya Myintzu, Hu, Jing, Li, Zhi-Hua, Mathavan, Sinnakaruppan, Gong, Zhiyuan
Format Journal Article
LanguageEnglish
Published Netherlands Elsevier B.V 01.10.2013
Subjects
Online AccessGet full text

Cover

Loading…
Abstract 4-Nitrophenol (4-NP) is a prioritized environmental pollutant and its toxicity has been investigated using zebrafish, advocated as an alternative toxicological model. However, molecular information of 4-NP induced hepatotoxicity is still limited. This study aimed to obtain molecular insights into 4-NP-induced hepatotoxicity using zebrafish as a model. Adult male zebrafish were exposed to 4-NP for 8, 24, 48 and 96h. Livers were sampled for microarray experiment, qRT-PCR and various histological analyses. Transcriptomic analysis revealed that genes associated with oxidative phosphorylation and electron transport chain were significantly up-regulated throughout early and late stages of 4-NP exposure due to oxidative phosphorylation uncoupling by 4-NP. This in turn induced oxidative stress damage and up-regulated pathways associated with tumor suppressors Rb and p53, cell cycle, DNA damage, proteasome degradation and apoptosis. Pathways associated with cell adhesion and morphology were deregulated. Carbohydrate and lipid metabolisms were down-regulated while methionine and aromatic amino acid metabolisms as well as NFKB pathway associated with chronic liver conditions were up-regulated. Up-regulation of NFKB, NFAT and interleukin pathways suggested hepatitis. Histological analyses with specific staining methods and qRT-PCR analysis of selected genes corroborated with the transcriptomic analysis suggesting 4-NP induced liver injury. Our findings allowed us to propose a plausible model and provide a broader understanding of the molecular events leading to 4-NP induced acute hepatotoxicity for future studies involving other nitrophenol derivatives. This is the first transcriptomic report on 4-NP induced hepatotoxicity. •Hepatotoxicity induced by 4-nitrophenol was investigated using adult male zebrafish.•Transcriptomic, histological and qRT-PCR analyses revealed liver toxicity and injury.•A plausible model for molecular events leading to hepatotoxicity is proposed.•This is the first transcriptomics report of 4-nitrophenol induced hepatotoxicity.•Highlight potential of zebrafish as an alternative model for hepatotoxicity studies
AbstractList 4-Nitrophenol (4-NP) is a prioritized environmental pollutant and its toxicity has been investigated using zebrafish, advocated as an alternative toxicological model. However, molecular information of 4-NP induced hepatotoxicity is still limited. This study aimed to obtain molecular insights into 4-NP-induced hepatotoxicity using zebrafish as a model. Adult male zebrafish were exposed to 4-NP for 8, 24, 48 and 96h. Livers were sampled for microarray experiment, qRT-PCR and various histological analyses. Transcriptomic analysis revealed that genes associated with oxidative phosphorylation and electron transport chain were significantly up-regulated throughout early and late stages of 4-NP exposure due to oxidative phosphorylation uncoupling by 4-NP. This in turn induced oxidative stress damage and up-regulated pathways associated with tumor suppressors Rb and p53, cell cycle, DNA damage, proteasome degradation and apoptosis. Pathways associated with cell adhesion and morphology were deregulated. Carbohydrate and lipid metabolisms were down-regulated while methionine and aromatic amino acid metabolisms as well as NFKB pathway associated with chronic liver conditions were up-regulated. Up-regulation of NFKB, NFAT and interleukin pathways suggested hepatitis. Histological analyses with specific staining methods and qRT-PCR analysis of selected genes corroborated with the transcriptomic analysis suggesting 4-NP induced liver injury. Our findings allowed us to propose a plausible model and provide a broader understanding of the molecular events leading to 4-NP induced acute hepatotoxicity for future studies involving other nitrophenol derivatives. This is the first transcriptomic report on 4-NP induced hepatotoxicity. •Hepatotoxicity induced by 4-nitrophenol was investigated using adult male zebrafish.•Transcriptomic, histological and qRT-PCR analyses revealed liver toxicity and injury.•A plausible model for molecular events leading to hepatotoxicity is proposed.•This is the first transcriptomics report of 4-nitrophenol induced hepatotoxicity.•Highlight potential of zebrafish as an alternative model for hepatotoxicity studies
4-Nitrophenol (4-NP) is a prioritized environmental pollutant and its toxicity has been investigated using zebrafish, advocated as an alternative toxicological model. However, molecular information of 4-NP induced hepatotoxicity is still limited. This study aimed to obtain molecular insights into 4-NP-induced hepatotoxicity using zebrafish as a model.BACKGROUND4-Nitrophenol (4-NP) is a prioritized environmental pollutant and its toxicity has been investigated using zebrafish, advocated as an alternative toxicological model. However, molecular information of 4-NP induced hepatotoxicity is still limited. This study aimed to obtain molecular insights into 4-NP-induced hepatotoxicity using zebrafish as a model.Adult male zebrafish were exposed to 4-NP for 8, 24, 48 and 96h. Livers were sampled for microarray experiment, qRT-PCR and various histological analyses.METHODSAdult male zebrafish were exposed to 4-NP for 8, 24, 48 and 96h. Livers were sampled for microarray experiment, qRT-PCR and various histological analyses.Transcriptomic analysis revealed that genes associated with oxidative phosphorylation and electron transport chain were significantly up-regulated throughout early and late stages of 4-NP exposure due to oxidative phosphorylation uncoupling by 4-NP. This in turn induced oxidative stress damage and up-regulated pathways associated with tumor suppressors Rb and p53, cell cycle, DNA damage, proteasome degradation and apoptosis. Pathways associated with cell adhesion and morphology were deregulated. Carbohydrate and lipid metabolisms were down-regulated while methionine and aromatic amino acid metabolisms as well as NFKB pathway associated with chronic liver conditions were up-regulated. Up-regulation of NFKB, NFAT and interleukin pathways suggested hepatitis. Histological analyses with specific staining methods and qRT-PCR analysis of selected genes corroborated with the transcriptomic analysis suggesting 4-NP induced liver injury.RESULTSTranscriptomic analysis revealed that genes associated with oxidative phosphorylation and electron transport chain were significantly up-regulated throughout early and late stages of 4-NP exposure due to oxidative phosphorylation uncoupling by 4-NP. This in turn induced oxidative stress damage and up-regulated pathways associated with tumor suppressors Rb and p53, cell cycle, DNA damage, proteasome degradation and apoptosis. Pathways associated with cell adhesion and morphology were deregulated. Carbohydrate and lipid metabolisms were down-regulated while methionine and aromatic amino acid metabolisms as well as NFKB pathway associated with chronic liver conditions were up-regulated. Up-regulation of NFKB, NFAT and interleukin pathways suggested hepatitis. Histological analyses with specific staining methods and qRT-PCR analysis of selected genes corroborated with the transcriptomic analysis suggesting 4-NP induced liver injury.Our findings allowed us to propose a plausible model and provide a broader understanding of the molecular events leading to 4-NP induced acute hepatotoxicity for future studies involving other nitrophenol derivatives.CONCLUSIONOur findings allowed us to propose a plausible model and provide a broader understanding of the molecular events leading to 4-NP induced acute hepatotoxicity for future studies involving other nitrophenol derivatives.This is the first transcriptomic report on 4-NP induced hepatotoxicity.GENERAL SIGNIFICANCEThis is the first transcriptomic report on 4-NP induced hepatotoxicity.
4-Nitrophenol (4-NP) is a prioritized environmental pollutant and its toxicity has been investigated using zebrafish, advocated as an alternative toxicological model. However, molecular information of 4-NP induced hepatotoxicity is still limited. This study aimed to obtain molecular insights into 4-NP-induced hepatotoxicity using zebrafish as a model. Adult male zebrafish were exposed to 4-NP for 8, 24, 48 and 96h. Livers were sampled for microarray experiment, qRT-PCR and various histological analyses. Transcriptomic analysis revealed that genes associated with oxidative phosphorylation and electron transport chain were significantly up-regulated throughout early and late stages of 4-NP exposure due to oxidative phosphorylation uncoupling by 4-NP. This in turn induced oxidative stress damage and up-regulated pathways associated with tumor suppressors Rb and p53, cell cycle, DNA damage, proteasome degradation and apoptosis. Pathways associated with cell adhesion and morphology were deregulated. Carbohydrate and lipid metabolisms were down-regulated while methionine and aromatic amino acid metabolisms as well as NFKB pathway associated with chronic liver conditions were up-regulated. Up-regulation of NFKB, NFAT and interleukin pathways suggested hepatitis. Histological analyses with specific staining methods and qRT-PCR analysis of selected genes corroborated with the transcriptomic analysis suggesting 4-NP induced liver injury. Our findings allowed us to propose a plausible model and provide a broader understanding of the molecular events leading to 4-NP induced acute hepatotoxicity for future studies involving other nitrophenol derivatives. This is the first transcriptomic report on 4-NP induced hepatotoxicity.
4-Nitrophenol (4-NP) is a prioritized environmental pollutant and its toxicity has been investigated using zebrafish, advocated as an alternative toxicological model. However, molecular information of 4-NP induced hepatotoxicity is still limited. This study aimed to obtain molecular insights into 4-NP-induced hepatotoxicity using zebrafish as a model.Adult male zebrafish were exposed to 4-NP for 8, 24, 48 and 96h. Livers were sampled for microarray experiment, qRT-PCR and various histological analyses.Transcriptomic analysis revealed that genes associated with oxidative phosphorylation and electron transport chain were significantly up-regulated throughout early and late stages of 4-NP exposure due to oxidative phosphorylation uncoupling by 4-NP. This in turn induced oxidative stress damage and up-regulated pathways associated with tumor suppressors Rb and p53, cell cycle, DNA damage, proteasome degradation and apoptosis. Pathways associated with cell adhesion and morphology were deregulated. Carbohydrate and lipid metabolisms were down-regulated while methionine and aromatic amino acid metabolisms as well as NFKB pathway associated with chronic liver conditions were up-regulated. Up-regulation of NFKB, NFAT and interleukin pathways suggested hepatitis. Histological analyses with specific staining methods and qRT-PCR analysis of selected genes corroborated with the transcriptomic analysis suggesting 4-NP induced liver injury.Our findings allowed us to propose a plausible model and provide a broader understanding of the molecular events leading to 4-NP induced acute hepatotoxicity for future studies involving other nitrophenol derivatives.This is the first transcriptomic report on 4-NP induced hepatotoxicity.
BACKGROUND: 4-Nitrophenol (4-NP) is a prioritized environmental pollutant and its toxicity has been investigated using zebrafish, advocated as an alternative toxicological model. However, molecular information of 4-NP induced hepatotoxicity is still limited. This study aimed to obtain molecular insights into 4-NP-induced hepatotoxicity using zebrafish as a model. METHODS: Adult male zebrafish were exposed to 4-NP for 8, 24, 48 and 96h. Livers were sampled for microarray experiment, qRT-PCR and various histological analyses. RESULTS: Transcriptomic analysis revealed that genes associated with oxidative phosphorylation and electron transport chain were significantly up-regulated throughout early and late stages of 4-NP exposure due to oxidative phosphorylation uncoupling by 4-NP. This in turn induced oxidative stress damage and up-regulated pathways associated with tumor suppressors Rb and p53, cell cycle, DNA damage, proteasome degradation and apoptosis. Pathways associated with cell adhesion and morphology were deregulated. Carbohydrate and lipid metabolisms were down-regulated while methionine and aromatic amino acid metabolisms as well as NFKB pathway associated with chronic liver conditions were up-regulated. Up-regulation of NFKB, NFAT and interleukin pathways suggested hepatitis. Histological analyses with specific staining methods and qRT-PCR analysis of selected genes corroborated with the transcriptomic analysis suggesting 4-NP induced liver injury. CONCLUSION: Our findings allowed us to propose a plausible model and provide a broader understanding of the molecular events leading to 4-NP induced acute hepatotoxicity for future studies involving other nitrophenol derivatives. GENERAL SIGNIFICANCE: This is the first transcriptomic report on 4-NP induced hepatotoxicity.
Author Hu, Jing
Li, Zhi-Hua
Hlaing, Mya Myintzu
Ung, Choong Yong
Lam, Siew Hong
Mathavan, Sinnakaruppan
Gong, Zhiyuan
Author_xml – sequence: 1
  givenname: Siew Hong
  surname: Lam
  fullname: Lam, Siew Hong
  email: dbslsh@nus.edu.sg
  organization: Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore
– sequence: 2
  givenname: Choong Yong
  surname: Ung
  fullname: Ung, Choong Yong
  organization: Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore
– sequence: 3
  givenname: Mya Myintzu
  surname: Hlaing
  fullname: Hlaing, Mya Myintzu
  organization: Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore
– sequence: 4
  givenname: Jing
  surname: Hu
  fullname: Hu, Jing
  organization: Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore
– sequence: 5
  givenname: Zhi-Hua
  surname: Li
  fullname: Li, Zhi-Hua
  organization: Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore
– sequence: 6
  givenname: Sinnakaruppan
  surname: Mathavan
  fullname: Mathavan, Sinnakaruppan
  organization: Genome Institute of Singapore, Agency for Science Technology and Research, Genome, 60 Biopolis Street, Singapore 138672, Singapore
– sequence: 7
  givenname: Zhiyuan
  surname: Gong
  fullname: Gong, Zhiyuan
  email: dbsgzy@nus.edu.sg
  organization: Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore
BackLink https://www.ncbi.nlm.nih.gov/pubmed/23791553$$D View this record in MEDLINE/PubMed
BookMark eNqFkc1u1DAUhS1URKeFN0CQJYsm-C-eTBdIqCo_UhEL2rVlOzeJRxk72A7q8A68M45SWLCg3lxL_s71veecoRPnHSD0kuCKYCLe7iutVQ-uopiwCosK4-YJ2pBmS8sGY3GCNphhXnIi6lN0FuMe51Pv6mfolLLtjtQ126BfX_wIZh5VKKyLth9SzJfkC146m4KfBnB-LK1rZwNtMcCkkk_-3hqbjpksfoIOqrNxuCxug3LRBDslf7DmohhsTH70vTVqLJRri6RCDym3yWNDAfdTgBitd_lRjccI8Tl62qkxwouHeo7uPlzfXn0qb75-_Hz1_qY0XNSpZIpoKmoihGEYM9bsTK0FE4brrmFc6y0YwoDRuqG64wY3WDcUFOftTtUGs3P0Zu07Bf99hpjkwUYD46gc-DlKuljVECbEoyjhZMc4pZxn9NUDOusDtHIK9qDCUf5xOwN8BUzwMQbo_iIEyyVUuZdrqHIJVWIh8xhZdvmPLJuvUjYuBWXHx8SvV3GnvFR9sFHefcuAWFakgizEu5WA7PgPC0FGY8HluG0Ak2Tr7f-_-A2FHcq6
CitedBy_id crossref_primary_10_1016_j_cbd_2023_101122
crossref_primary_10_1007_s11356_022_23368_z
crossref_primary_10_2131_jts_41_371
crossref_primary_10_1002_jat_3332
crossref_primary_10_1016_j_chemosphere_2021_130049
crossref_primary_10_1016_j_gene_2014_12_014
crossref_primary_10_1016_j_acthis_2019_151463
crossref_primary_10_1016_j_scp_2024_101867
crossref_primary_10_1007_s11356_021_12689_0
crossref_primary_10_1039_C5RA04335B
crossref_primary_10_1021_jp511056t
crossref_primary_10_1371_journal_pone_0122889
crossref_primary_10_1016_j_aquaculture_2024_740630
crossref_primary_10_1016_j_aquatox_2023_106441
crossref_primary_10_1007_s11356_021_13806_9
crossref_primary_10_1155_2016_2715718
crossref_primary_10_1016_j_envpol_2016_06_016
crossref_primary_10_1016_j_biopha_2019_109558
crossref_primary_10_1016_j_etap_2015_12_011
crossref_primary_10_1016_j_colsurfa_2021_127243
crossref_primary_10_1016_j_cbd_2023_101074
crossref_primary_10_1021_acs_est_2c00821
crossref_primary_10_1002_jat_3288
crossref_primary_10_1016_j_fct_2023_114186
crossref_primary_10_1007_s11270_023_06574_4
crossref_primary_10_1016_j_jes_2023_09_032
crossref_primary_10_1021_acs_est_0c06867
crossref_primary_10_1093_toxsci_kfw250
crossref_primary_10_1016_j_envpol_2022_120161
crossref_primary_10_1002_etc_5960
crossref_primary_10_1371_journal_pone_0155485
crossref_primary_10_1016_j_cej_2019_123140
crossref_primary_10_1007_s11144_015_0916_2
crossref_primary_10_1016_j_yrtph_2017_05_001
crossref_primary_10_3390_w14091387
crossref_primary_10_1007_s10695_022_01101_4
Cites_doi 10.1016/j.aquatox.2011.01.012
10.1177/1947601911409737
10.1016/0043-1354(86)90054-0
10.1016/0009-2797(82)90111-9
10.1289/ehp.02110s61041
10.1016/j.bbagen.2011.10.009
10.1016/S0021-9258(18)99321-X
10.1002/bdrc.20214
10.1007/978-1-60327-977-2_12
10.1038/nature07986
10.1016/j.yrtph.2009.05.018
10.1007/s11356-008-0018-z
10.1006/taap.1993.1241
10.1021/jf60201a025
10.1007/978-1-60327-977-2_13
10.1016/0009-2797(75)90106-4
10.1016/0166-445X(89)90016-7
10.1007/BF01055545
10.1016/S0380-1330(87)71653-0
10.1152/physiolgenomics.00201.2005
10.1095/biolreprod.103.024810
10.1289/ehp.9087213
10.1016/j.cellbi.2008.08.023
10.3390/ijms12074609
10.3109/00498258709167413
10.1016/j.taap.2006.06.010
10.1046/j.1467-789X.2001.00043.x
10.1038/nbt1169
10.1371/journal.pgen.1000121
10.1093/jn/136.1.295S
10.1093/toxsci/kfm011
10.1016/j.neuro.2011.04.006
10.1038/onc.2011.48
10.1152/ajpcell.1992.262.2.C445
10.1016/0147-6513(82)90085-9
10.1016/j.tiv.2007.12.005
10.1016/0300-483X(95)03177-H
10.1038/nrgastro.2010.213
10.1186/gb-2007-8-10-r227
10.1038/nrc2663
10.1089/hwm.1988.5.109
10.1093/toxsci/kfi110
10.1248/bpb1978.6.851
10.1016/0009-2797(81)90180-0
10.1385/CT:6:2:111
10.1007/BF01622118
10.1007/s12020-009-9192-0
10.1289/ehp.0900555
10.1073/pnas.0506580102
ContentType Journal Article
Copyright 2013 Elsevier B.V.
Copyright © 2013 Elsevier B.V. All rights reserved.
Copyright_xml – notice: 2013 Elsevier B.V.
– notice: Copyright © 2013 Elsevier B.V. All rights reserved.
DBID FBQ
AAYXX
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
7X8
7S9
L.6
DOI 10.1016/j.bbagen.2013.06.008
DatabaseName AGRIS
CrossRef
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
MEDLINE - Academic
AGRICOLA
AGRICOLA - Academic
DatabaseTitle CrossRef
MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
MEDLINE - Academic
AGRICOLA
AGRICOLA - Academic
DatabaseTitleList
MEDLINE - Academic
MEDLINE
AGRICOLA

Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
– sequence: 3
  dbid: FBQ
  name: AGRIS
  url: http://www.fao.org/agris/Centre.asp?Menu_1ID=DB&Menu_2ID=DB1&Language=EN&Content=http://www.fao.org/agris/search?Language=EN
  sourceTypes: Publisher
DeliveryMethod fulltext_linktorsrc
Discipline Chemistry
Biology
EISSN 1872-8006
EndPage 4789
ExternalDocumentID 23791553
10_1016_j_bbagen_2013_06_008
US201600002618
S0304416513002687
Genre Research Support, Non-U.S. Gov't
Journal Article
GroupedDBID ---
--K
--M
.~1
0R~
1B1
1RT
1~.
1~5
23N
3O-
4.4
457
4G.
53G
5GY
5RE
5VS
7-5
71M
8P~
9JM
AACTN
AAEDT
AAEDW
AAIAV
AAIKJ
AAKOC
AALRI
AAOAW
AAQFI
AAQXK
AAXUO
ABEFU
ABFNM
ABGSF
ABMAC
ABUDA
ABXDB
ABYKQ
ACDAQ
ACIUM
ACRLP
ADBBV
ADEZE
ADMUD
ADUVX
AEBSH
AEHWI
AEKER
AFKWA
AFTJW
AFXIZ
AGHFR
AGRDE
AGUBO
AGYEJ
AHHHB
AIEXJ
AIKHN
AITUG
AJBFU
AJOXV
ALMA_UNASSIGNED_HOLDINGS
AMFUW
AMRAJ
ASPBG
AVWKF
AXJTR
AZFZN
BKOJK
BLXMC
CS3
DOVZS
EBS
EFJIC
EFLBG
EJD
EO8
EO9
EP2
EP3
FDB
FEDTE
FGOYB
FIRID
FNPLU
FYGXN
G-2
G-Q
GBLVA
HLW
HVGLF
HZ~
IHE
J1W
KOM
LX3
M41
MO0
N9A
O-L
O9-
OAUVE
OHT
OZT
P-8
P-9
PC.
Q38
R2-
ROL
RPZ
SBG
SCC
SDF
SDG
SDP
SES
SEW
SPCBC
SSU
SSZ
T5K
UQL
WH7
WUQ
XJT
XPP
~G-
ABPIF
ABPTK
FBQ
AAHBH
AATTM
AAXKI
AAYWO
AAYXX
ABWVN
ACRPL
ACVFH
ADCNI
ADNMO
AEIPS
AEUPX
AFJKZ
AFPUW
AGCQF
AGQPQ
AGRNS
AIGII
AIIUN
AKBMS
AKRWK
AKYEP
ANKPU
APXCP
BNPGV
CITATION
SSH
-~X
.55
.GJ
AAYJJ
ABJNI
AFFNX
AI.
CGR
CUY
CVF
ECM
EIF
F5P
H~9
K-O
MVM
NPM
RIG
TWZ
UHS
VH1
X7M
Y6R
YYP
ZE2
ZGI
~KM
7X8
7S9
L.6
ID FETCH-LOGICAL-c465t-3a1b265166c3003389c5b636c4bf834bb7ec13e32582bf4c080b82ea44d9a5c03
IEDL.DBID .~1
ISSN 0304-4165
0006-3002
IngestDate Fri Jul 11 06:58:19 EDT 2025
Fri Jul 11 08:07:31 EDT 2025
Thu Apr 03 06:59:45 EDT 2025
Tue Jul 01 00:22:01 EDT 2025
Thu Apr 24 22:55:25 EDT 2025
Wed Dec 27 19:08:54 EST 2023
Fri Feb 23 02:34:15 EST 2024
IsDoiOpenAccess false
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 10
Keywords Zebrafish
4-Nitrophenol
Transcriptomic
Microarray
Toxicity
Liver
Language English
License Copyright © 2013 Elsevier B.V. All rights reserved.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c465t-3a1b265166c3003389c5b636c4bf834bb7ec13e32582bf4c080b82ea44d9a5c03
Notes http://dx.doi.org/10.1016/j.bbagen.2013.06.008
ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
OpenAccessLink http://scholarbank.nus.edu.sg/handle/10635/101142
PMID 23791553
PQID 1419342244
PQPubID 23479
PageCount 12
ParticipantIDs proquest_miscellaneous_2000081366
proquest_miscellaneous_1419342244
pubmed_primary_23791553
crossref_primary_10_1016_j_bbagen_2013_06_008
crossref_citationtrail_10_1016_j_bbagen_2013_06_008
fao_agris_US201600002618
elsevier_sciencedirect_doi_10_1016_j_bbagen_2013_06_008
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate 2013-10-01
PublicationDateYYYYMMDD 2013-10-01
PublicationDate_xml – month: 10
  year: 2013
  text: 2013-10-01
  day: 01
PublicationDecade 2010
PublicationPlace Netherlands
PublicationPlace_xml – name: Netherlands
PublicationTitle Biochimica et biophysica acta
PublicationTitleAlternate Biochim Biophys Acta
PublicationYear 2013
Publisher Elsevier B.V
Publisher_xml – name: Elsevier B.V
References Grundlingh, Dargan, El-Zanfaly, Wood (bb0220) 2011; 7
Green, Kroemer (bb0210) 2009; 458
Mattingly, Hampton, Brothers, Griffin, Planchart (bb0160) 2009; 117
Harper, Dickinson, Brand (bb0295) 2001; 2
Archer (bb0075) 1975; 23
Hill, Teraoka, Heideman, Peterson (bb0085) 2005; 86
Deisenroth, Zhang (bb0275) 2011; 2
Chang, Beland, Hines, Fuscoe, Han, Chen (bb0255) 2011; 12
Loehr, Krishnamoorthy (bb0045) 1988; 5
Lam, Mathavan, Gong (bb0165) 2009; 546
Buccafusco, Ells, Le Blanc (bb0030) 1981; 26
Mizuma, Hayashi, Awazu (bb0125) 1983
Wagner, Unterreiner (bb0240) 1982; 41
Kasokat, Nagel, Urich (bb0130) 1987; 17
Braunbeck, Storch, Bresch (bb0115) 1989; 14
Call, Brooke, Lu (bb0035) 1980; 9
Vary, Kimball (bb0265) 1992; 262
Donati, Bertoni, Brighenti, Vici, Treré, Volarevic, Montanaro, Derenzini (bb0270) 2011; 30
United States Environmental Protection Agency (US EPA) (bb0005) 1980
Furuta, Suzuki, Taneda, Kamata, Hayashi, Mori, Li, Watanabe, Taya (bb0060) 2004; 70
Cotter (bb0205) 2009; 9
Yang, Kemadjou, Zinsmeister, Bauer, Legradi, Müller, Pankratz, Jäkel, Strähle (bb0135) 2007; 8
Sukardi, Zhang, Lui, Ung, Mathavan, Gong, Lam (bb0145) 2012; 1820
Li, Taneda, Suzuki, Furuta, Watanabe, Taya (bb0065) 2006; 217
Flemming (bb0100) 2007; 10
Scholz, Fischer, Gündel, Küster, Luckenbach, Voelker (bb0105) 2008; 15
National Research Council (bb0280) 1981; Volume 4
Lam, Lee, Lin, Thomsen, Fu, Murthy, Li, Govindarajan, Nick, Bourque, Gong, Lufkin, Liu, Mathavan (bb0150) 2011; 16
Eichenbaum, Johnson, Kirkland, O'Neill, Stellar, Bielawne, DeWire, Areia, Bryant, Weiner, Desai-Krieger, Guzzie-Peck, Evans, Tonelli (bb0025) 2009; 55
Sipes, Padilla, Knudsen (bb0110) 2011; 93
Bresch (bb0120) 1982; 6
Lam, Winata, Tong, Korzh, Lim, Korzh, Spitsbergen, Mathavan, Miller, Liu, Gong (bb0140) 2006; 27
Tilton, Tilton, Bammler, Beyer, Stapleton, Scholz, Gallagher (bb0155) 2011; 102
Agency for Toxic Substances Disease Registry (ATSDR) (bb0010) 1992
Camanzo, Rice, Jude, Rossmann (bb0080) 1987; 13
Lam, Wu, Vega, Miller, Spitsbergen, Tong, Zhan, Govindarajan, Lee, Mathavan, Murthy, Buhler, Liu, Gong (bb0090) 2006; 24
Nishimura, Dewa, Muguruma, Kuroiwa, Yasuno, Shima, Jin, Takahashi, Umemura, Mitsumori (bb0200) 2007; 97
Han, Kim, Kim, Kim, Park (bb0195) 2008; 22
Terada (bb0180) 1990; 87
Fontana, Moreira, Torres, Fernández, Ríos, Sánchez de Medina, Gil (bb0230) 1996; 106
Lam, Krishna, Gong (bb0170) 2009; 546
Lam, Mathavan, Tong, Li, Karuturi, Wu, Vega, Liu, Gong (bb0095) 2008; 4
Hryhorczuk, Moomey, Burton, Runkle, Chen, Saxer, Slightom, Dimos, McCann, Barr (bb0050) 2002; 110
Wagner, Unterreiner (bb0235) 1981; 37
Cajone, Schiaffonati, Bernelli-Zazzera (bb0250) 1976; 34
Richards, Shiehs (bb0040) 1986; 20
Ramachandra Pai, Jayanthi Bai, Venkitasubramanian (bb0245) 1975; 10
Charlton (bb0225) 2006; 136
Brasier (bb0285) 2006; 6
Vidau, González-Polo, Niso-Santano, Gómez-Sánchez, Bravo-San Pedro, Pizarro-Estrella, Blasco, Brunet, Belzunces, Fuentes (bb0190) 2011; 32
Chaudhuri, Lieberman (bb0260) 1968; 243
Subramanian, Tamayo, Mootha, Mukherjee, Ebert, Gillette, Paulovich, Pomeroy, Golub, Lander, Mesirov (bb0175) 2005; 102
Han, Kim, Kim, Park (bb0185) 2008; 32
Luedde, Schwabe (bb0290) 2011; 8
Li, Li, Suzuki, Taneda, Watanabe, Taya (bb0070) 2009; 36
Dominguez, Menkel, Fairbrother, Williams, Tanner (bb0215) 1993; 123
Li (10.1016/j.bbagen.2013.06.008_bb0065) 2006; 217
Vidau (10.1016/j.bbagen.2013.06.008_bb0190) 2011; 32
Nishimura (10.1016/j.bbagen.2013.06.008_bb0200) 2007; 97
Donati (10.1016/j.bbagen.2013.06.008_bb0270) 2011; 30
Lam (10.1016/j.bbagen.2013.06.008_bb0140) 2006; 27
Sipes (10.1016/j.bbagen.2013.06.008_bb0110) 2011; 93
Li (10.1016/j.bbagen.2013.06.008_bb0070) 2009; 36
Grundlingh (10.1016/j.bbagen.2013.06.008_bb0220) 2011; 7
Harper (10.1016/j.bbagen.2013.06.008_bb0295) 2001; 2
Archer (10.1016/j.bbagen.2013.06.008_bb0075) 1975; 23
Flemming (10.1016/j.bbagen.2013.06.008_bb0100) 2007; 10
Bresch (10.1016/j.bbagen.2013.06.008_bb0120) 1982; 6
Brasier (10.1016/j.bbagen.2013.06.008_bb0285) 2006; 6
Scholz (10.1016/j.bbagen.2013.06.008_bb0105) 2008; 15
Braunbeck (10.1016/j.bbagen.2013.06.008_bb0115) 1989; 14
Charlton (10.1016/j.bbagen.2013.06.008_bb0225) 2006; 136
United States Environmental Protection Agency (US EPA) (10.1016/j.bbagen.2013.06.008_bb0005) 1980
Lam (10.1016/j.bbagen.2013.06.008_bb0170) 2009; 546
Han (10.1016/j.bbagen.2013.06.008_bb0195) 2008; 22
Furuta (10.1016/j.bbagen.2013.06.008_bb0060) 2004; 70
Hryhorczuk (10.1016/j.bbagen.2013.06.008_bb0050) 2002; 110
Chaudhuri (10.1016/j.bbagen.2013.06.008_bb0260) 1968; 243
Chang (10.1016/j.bbagen.2013.06.008_bb0255) 2011; 12
Fontana (10.1016/j.bbagen.2013.06.008_bb0230) 1996; 106
Wagner (10.1016/j.bbagen.2013.06.008_bb0240) 1982; 41
Mattingly (10.1016/j.bbagen.2013.06.008_bb0160) 2009; 117
Mizuma (10.1016/j.bbagen.2013.06.008_bb0125) 1983
Han (10.1016/j.bbagen.2013.06.008_bb0185) 2008; 32
National Research Council (10.1016/j.bbagen.2013.06.008_bb0280) 1981; Volume 4
Call (10.1016/j.bbagen.2013.06.008_bb0035) 1980; 9
Lam (10.1016/j.bbagen.2013.06.008_bb0095) 2008; 4
Terada (10.1016/j.bbagen.2013.06.008_bb0180) 1990; 87
Vary (10.1016/j.bbagen.2013.06.008_bb0265) 1992; 262
Green (10.1016/j.bbagen.2013.06.008_bb0210) 2009; 458
Cotter (10.1016/j.bbagen.2013.06.008_bb0205) 2009; 9
Wagner (10.1016/j.bbagen.2013.06.008_bb0235) 1981; 37
Agency for Toxic Substances Disease Registry (ATSDR) (10.1016/j.bbagen.2013.06.008_bb0010) 1992
Kasokat (10.1016/j.bbagen.2013.06.008_bb0130) 1987; 17
Luedde (10.1016/j.bbagen.2013.06.008_bb0290) 2011; 8
Lam (10.1016/j.bbagen.2013.06.008_bb0090) 2006; 24
Hill (10.1016/j.bbagen.2013.06.008_bb0085) 2005; 86
Yang (10.1016/j.bbagen.2013.06.008_bb0135) 2007; 8
Dominguez (10.1016/j.bbagen.2013.06.008_bb0215) 1993; 123
Camanzo (10.1016/j.bbagen.2013.06.008_bb0080) 1987; 13
Lam (10.1016/j.bbagen.2013.06.008_bb0165) 2009; 546
Tilton (10.1016/j.bbagen.2013.06.008_bb0155) 2011; 102
Loehr (10.1016/j.bbagen.2013.06.008_bb0045) 1988; 5
Sukardi (10.1016/j.bbagen.2013.06.008_bb0145) 2012; 1820
Ramachandra Pai (10.1016/j.bbagen.2013.06.008_bb0245) 1975; 10
Lam (10.1016/j.bbagen.2013.06.008_bb0150) 2011; 16
Deisenroth (10.1016/j.bbagen.2013.06.008_bb0275) 2011; 2
Cajone (10.1016/j.bbagen.2013.06.008_bb0250) 1976; 34
Eichenbaum (10.1016/j.bbagen.2013.06.008_bb0025) 2009; 55
Richards (10.1016/j.bbagen.2013.06.008_bb0040) 1986; 20
Subramanian (10.1016/j.bbagen.2013.06.008_bb0175) 2005; 102
Buccafusco (10.1016/j.bbagen.2013.06.008_bb0030) 1981; 26
References_xml – volume: 102
  start-page: 15545
  year: 2005
  end-page: 15550
  ident: bb0175
  article-title: Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
– volume: 458
  start-page: 1127
  year: 2009
  end-page: 1130
  ident: bb0210
  article-title: Cytoplasmic functions of the tumour suppressor p53
  publication-title: Nature
– volume: 8
  start-page: R227
  year: 2007
  ident: bb0135
  article-title: Transcriptional profiling reveals barcode-like toxicogenomic responses in the zebrafish embryo
  publication-title: Genome Biol.
– volume: 106
  start-page: 197
  year: 1996
  end-page: 206
  ident: bb0230
  article-title: Serum amino acid changes in rats with thioacetamide-induced liver cirrhosis
  publication-title: Toxicology
– volume: 23
  start-page: 858
  year: 1975
  end-page: 860
  ident: bb0075
  article-title: Dissipation of parathion and related compounds from field-sprayed lettuce
  publication-title: J. Agric. Food Chem.
– volume: 102
  start-page: 205
  year: 2011
  end-page: 215
  ident: bb0155
  article-title: Transcriptional impact of organophosphate and metal mixtures on olfaction: copper dominates the chlorpyrifos-induced response in adult zebrafish
  publication-title: Aquat. Toxicol.
– volume: 2
  start-page: 255
  year: 2001
  end-page: 265
  ident: bb0295
  article-title: Mitochondrial uncoupling as a target for drug development for the treatment of obesity
  publication-title: Obes. Rev.
– volume: 20
  start-page: 1077
  year: 1986
  end-page: 1090
  ident: bb0040
  article-title: Biological fate of organic priority pollutants in the aquatic environment
  publication-title: Water Res.
– volume: 123
  start-page: 226
  year: 1993
  end-page: 233
  ident: bb0215
  article-title: The effect of 2,4-dinitrophenol on the metabolic rate of bobwhite quail
  publication-title: Toxicol. Appl. Pharmacol.
– year: 1980
  ident: bb0005
  article-title: Ambient Water Quality Criteria for Nitrophenols
– volume: 110
  start-page: 1041
  year: 2002
  end-page: 1046
  ident: bb0050
  article-title: Urinary p-nitrophenol as a biomarker of household exposure to methyl parathion
  publication-title: Environ. Health Perspect.
– volume: 10
  start-page: 1
  year: 2007
  end-page: 7
  ident: bb0100
  article-title: Zebrafish as an alternative model organism for disease modelling and drug discovery: implications for the 3Rs
  publication-title: NC3Rs
– volume: 546
  start-page: 175
  year: 2009
  end-page: 195
  ident: bb0165
  article-title: Zebrafish spotted-microarray for genome-wide expression profiling experiments. Part I: array printing and hybridization
  publication-title: Methods Mol. Biol.
– volume: 97
  start-page: 44
  year: 2007
  end-page: 54
  ident: bb0200
  article-title: Effect of fenofibrate on oxidative DNA damage and on gene expression related to cell proliferation and apoptosis in rats
  publication-title: Toxicol. Sci.
– volume: Volume 4
  start-page: 241
  year: 1981
  ident: bb0280
  article-title: Drinking Water & Health
– volume: 32
  start-page: 1536
  year: 2008
  end-page: 1545
  ident: bb0185
  article-title: 2,4-Dinitrophenol induces apoptosis in As4.1 juxtaglomerular cells through rapid depletion of GSH
  publication-title: Cell Biol. Int.
– volume: 55
  start-page: 33
  year: 2009
  end-page: 42
  ident: bb0025
  article-title: Assessment of the genotoxic and carcinogenic risks of p-nitrophenol when it is present as an impurity in a drug product
  publication-title: Regul. Toxicol. Pharmacol.
– volume: 262
  start-page: C445
  year: 1992
  end-page: C452
  ident: bb0265
  article-title: Regulation of hepatic protein synthesis in chronic inflammation and sepsis
  publication-title: Am. J. Physiol.
– volume: 93
  start-page: 256
  year: 2011
  end-page: 267
  ident: bb0110
  article-title: Zebrafish: as an integrative model for twenty-first century toxicity testing
  publication-title: Birth Defects Res C Embryo Today
– volume: 24
  start-page: 73
  year: 2006
  end-page: 75
  ident: bb0090
  article-title: Conservation of gene expression signatures between zebrafish and human liver tumors and tumor progression
  publication-title: Nat. Biotechnol.
– volume: 1820
  start-page: 33
  year: 2012
  end-page: 43
  ident: bb0145
  article-title: Liver X receptor agonist T0901317 induced liver perturbation in zebrafish: histological, gene set enrichment and expression analyses
  publication-title: Biochim. Biophys. Acta
– volume: 27
  start-page: 351
  year: 2006
  end-page: 361
  ident: bb0140
  article-title: Transcriptome kinetics of arsenic-induced adaptive response in zebrafish liver
  publication-title: Physiol. Genomics
– volume: 34
  start-page: 387
  year: 1976
  end-page: 393
  ident: bb0250
  article-title: Protein synthesis in liver injury. Soluble factors of protein synthesis in the cytosol from ischemic rat liver
  publication-title: Lab. Invest.
– volume: 26
  start-page: 446
  year: 1981
  end-page: 452
  ident: bb0030
  article-title: Acute toxicity of priority pollutants to bluegill (
  publication-title: Bull. Environ. Contam. Toxicol.
– volume: 217
  start-page: 1
  year: 2006
  end-page: 6
  ident: bb0065
  article-title: Estrogenic and anti-androgenic activities of 4-nitrophenol in diesel exhaust particles
  publication-title: Toxicol. Appl. Pharmacol.
– volume: 5
  start-page: 109
  year: 1988
  end-page: 119
  ident: bb0045
  article-title: Terrestrial bioaccumulation potential of phenolic compounds
  publication-title: Hazard. Waste Hazard. Mater.
– volume: 6
  start-page: 111
  year: 2006
  end-page: 130
  ident: bb0285
  article-title: The NF-kappaB regulatory network
  publication-title: Cardiovasc. Toxicol.
– volume: 14
  start-page: 185
  year: 1989
  end-page: 202
  ident: bb0115
  article-title: Sex-specific reaction of liver ultrastructure in zebra fish (
  publication-title: Aquat. Toxicol.
– year: 1992
  ident: bb0010
  article-title: Toxicological Profile for Nitrophenols: 2-Nitrophenol and 4-Nitrophenol
– volume: 8
  start-page: 108
  year: 2011
  end-page: 118
  ident: bb0290
  article-title: NF-κB in the liver—linking injury, fibrosis and hepatocellular carcinoma
  publication-title: Nat. Rev. Gastroenterol. Hepatol.
– volume: 4
  start-page: e1000121
  year: 2008
  ident: bb0095
  article-title: Zebrafish whole-adult-organism chemogenomics for large-scale predictive and discovery chemical biology
  publication-title: PLos Genet.
– volume: 41
  start-page: 353
  year: 1982
  end-page: 360
  ident: bb0240
  article-title: Synthesis of transfer RNA in rat liver after acute and chronic aflatoxin B1 administration
  publication-title: Chem. Biol. Interact.
– volume: 15
  start-page: 394
  year: 2008
  end-page: 404
  ident: bb0105
  article-title: The zebrafish embryo model in environmental risk assessment—applications beyond acute toxicity testing
  publication-title: Environ. Sci. Pollut. Res. Int.
– volume: 546
  start-page: 197
  year: 2009
  end-page: 226
  ident: bb0170
  article-title: Zebrafish spotted-microarray for genome-wide expression profiling experiments: data acquisition and analysis
  publication-title: Methods Mol. Biol.
– volume: 9
  start-page: 501
  year: 2009
  end-page: 507
  ident: bb0205
  article-title: Apoptosis and cancer: the genesis of a research field
  publication-title: Nat. Rev. Cancer
– volume: 30
  start-page: 3274
  year: 2011
  end-page: 3288
  ident: bb0270
  article-title: The balance between rRNA and ribosomal protein synthesis up- and downregulates the tumour suppressor p53 in mammalian cells
  publication-title: Oncogene
– volume: 117
  start-page: 981
  year: 2009
  end-page: 987
  ident: bb0160
  article-title: Perturbation of defense pathways by low-dose arsenic exposure in zebrafish embryos
  publication-title: Environ. Health Perspect.
– volume: 12
  start-page: 4609
  year: 2011
  end-page: 4624
  ident: bb0255
  article-title: Identification and categorization of liver toxicity markers induced by a related pair of drugs
  publication-title: Int. J. Mol. Sci.
– volume: 70
  start-page: 1527
  year: 2004
  end-page: 1533
  ident: bb0060
  article-title: Estrogenic activities of nitrophenols in diesel exhaust particles
  publication-title: Biol. Reprod.
– volume: 7
  start-page: 205
  year: 2011
  end-page: 212
  ident: bb0220
  article-title: 2,4-Dinitrophenol (DNP): a weight loss agent with significant acute toxicity and risk of death
  publication-title: J. Med.
– volume: 9
  start-page: 699
  year: 1980
  end-page: 714
  ident: bb0035
  article-title: Uptake, elimination, and metabolism of three phenols by fathead minnows
  publication-title: Arch. Environ. Contam. Toxicol.
– volume: 36
  start-page: 98
  year: 2009
  end-page: 102
  ident: bb0070
  article-title: 4-Nitrophenol isolated from diesel exhaust particles disrupts regulation of reproductive hormones in immature male rats
  publication-title: Endocrine
– volume: 243
  start-page: 29
  year: 1968
  end-page: 33
  ident: bb0260
  article-title: Control of ribosome synthesis in normal and regenerating liver
  publication-title: J. Biol. Chem.
– volume: 2
  start-page: 392
  year: 2011
  end-page: 403
  ident: bb0275
  article-title: The ribosomal protein–Mdm2–p53 pathway and energy metabolism: bridging the gap between feast and famine
  publication-title: Genes Cancer
– volume: 13
  start-page: 296
  year: 1987
  end-page: 309
  ident: bb0080
  article-title: Organic priority pollutants in nearshore fish from 14 Lake Michigan tributaries and embayments, 1983
  publication-title: J. Great Lakes Res.
– start-page: 851
  year: 1983
  end-page: 858
  ident: bb0125
  article-title: p-Nitrophenol sulfation in rat liver cytosol: multiple forms and substrate inhibition of aryl sulfotransferase
  publication-title: J. Pharm. Dyn.
– volume: 136
  start-page: 295S
  year: 2006
  end-page: 298S
  ident: bb0225
  article-title: Branched-chain amino acid enriched supplements as therapy for liver disease
  publication-title: J. Nutr.
– volume: 16
  start-page: 41
  year: 2011
  ident: bb0150
  article-title: Molecular conservation of estrogen-response associated with cell cycle regulation, hormonal carcinogenesis and cancer in zebrafish and human cancer cell lines
  publication-title: BMC Med. Genet.
– volume: 22
  start-page: 659
  year: 2008
  end-page: 670
  ident: bb0195
  article-title: 2,4-Dinitrophenol induces G1 phase arrest and apoptosis in human pulmonary adenocarcinoma Calu-6 cells
  publication-title: Toxicol. in Vitro
– volume: 10
  start-page: 123
  year: 1975
  end-page: 131
  ident: bb0245
  article-title: Effect of aflatoxins on oxidative phosphorylation by rat liver mitochondria
  publication-title: Chem. Biol. Interact.
– volume: 17
  start-page: 1215
  year: 1987
  end-page: 1221
  ident: bb0130
  article-title: The metabolism of phenol and substituted phenols in zebrafish
  publication-title: Xenobiotica
– volume: 37
  start-page: 233
  year: 1981
  end-page: 244
  ident: bb0235
  article-title: Inhibition of rat liver aminoacyl-tRNA synthetases
  publication-title: Chem. Biol. Interact.
– volume: 6
  start-page: 102
  year: 1982
  end-page: 112
  ident: bb0120
  article-title: Investigation of the long-term action of xenobiotics on fish with special regard to reproduction
  publication-title: Ecotoxicol. Environ. Saf.
– volume: 86
  start-page: 6
  year: 2005
  end-page: 19
  ident: bb0085
  article-title: Zebrafish as a model vertebrate for investigating chemical toxicity
  publication-title: Toxicol. Sci.
– volume: 87
  start-page: 213
  year: 1990
  end-page: 218
  ident: bb0180
  article-title: Uncouplers of oxidative phosphorylation
  publication-title: Environ. Health Perspect.
– volume: 32
  start-page: 935
  year: 2011
  end-page: 943
  ident: bb0190
  article-title: Fipronil is a powerful uncoupler of oxidative phosphorylation that triggers apoptosis in human neuronal cell line SHSY5Y
  publication-title: Neurotoxicology
– volume: 102
  start-page: 205
  year: 2011
  ident: 10.1016/j.bbagen.2013.06.008_bb0155
  article-title: Transcriptional impact of organophosphate and metal mixtures on olfaction: copper dominates the chlorpyrifos-induced response in adult zebrafish
  publication-title: Aquat. Toxicol.
  doi: 10.1016/j.aquatox.2011.01.012
– volume: 2
  start-page: 392
  year: 2011
  ident: 10.1016/j.bbagen.2013.06.008_bb0275
  article-title: The ribosomal protein–Mdm2–p53 pathway and energy metabolism: bridging the gap between feast and famine
  publication-title: Genes Cancer
  doi: 10.1177/1947601911409737
– year: 1992
  ident: 10.1016/j.bbagen.2013.06.008_bb0010
– year: 1980
  ident: 10.1016/j.bbagen.2013.06.008_bb0005
– volume: 20
  start-page: 1077
  year: 1986
  ident: 10.1016/j.bbagen.2013.06.008_bb0040
  article-title: Biological fate of organic priority pollutants in the aquatic environment
  publication-title: Water Res.
  doi: 10.1016/0043-1354(86)90054-0
– volume: 7
  start-page: 205
  year: 2011
  ident: 10.1016/j.bbagen.2013.06.008_bb0220
  article-title: 2,4-Dinitrophenol (DNP): a weight loss agent with significant acute toxicity and risk of death
  publication-title: J. Med.
– volume: 41
  start-page: 353
  year: 1982
  ident: 10.1016/j.bbagen.2013.06.008_bb0240
  article-title: Synthesis of transfer RNA in rat liver after acute and chronic aflatoxin B1 administration
  publication-title: Chem. Biol. Interact.
  doi: 10.1016/0009-2797(82)90111-9
– volume: 34
  start-page: 387
  year: 1976
  ident: 10.1016/j.bbagen.2013.06.008_bb0250
  article-title: Protein synthesis in liver injury. Soluble factors of protein synthesis in the cytosol from ischemic rat liver
  publication-title: Lab. Invest.
– volume: 110
  start-page: 1041
  year: 2002
  ident: 10.1016/j.bbagen.2013.06.008_bb0050
  article-title: Urinary p-nitrophenol as a biomarker of household exposure to methyl parathion
  publication-title: Environ. Health Perspect.
  doi: 10.1289/ehp.02110s61041
– volume: 1820
  start-page: 33
  year: 2012
  ident: 10.1016/j.bbagen.2013.06.008_bb0145
  article-title: Liver X receptor agonist T0901317 induced liver perturbation in zebrafish: histological, gene set enrichment and expression analyses
  publication-title: Biochim. Biophys. Acta
  doi: 10.1016/j.bbagen.2011.10.009
– volume: 243
  start-page: 29
  year: 1968
  ident: 10.1016/j.bbagen.2013.06.008_bb0260
  article-title: Control of ribosome synthesis in normal and regenerating liver
  publication-title: J. Biol. Chem.
  doi: 10.1016/S0021-9258(18)99321-X
– volume: 93
  start-page: 256
  year: 2011
  ident: 10.1016/j.bbagen.2013.06.008_bb0110
  article-title: Zebrafish: as an integrative model for twenty-first century toxicity testing
  publication-title: Birth Defects Res C Embryo Today
  doi: 10.1002/bdrc.20214
– volume: 546
  start-page: 175
  year: 2009
  ident: 10.1016/j.bbagen.2013.06.008_bb0165
  article-title: Zebrafish spotted-microarray for genome-wide expression profiling experiments. Part I: array printing and hybridization
  publication-title: Methods Mol. Biol.
  doi: 10.1007/978-1-60327-977-2_12
– volume: 458
  start-page: 1127
  year: 2009
  ident: 10.1016/j.bbagen.2013.06.008_bb0210
  article-title: Cytoplasmic functions of the tumour suppressor p53
  publication-title: Nature
  doi: 10.1038/nature07986
– volume: 55
  start-page: 33
  year: 2009
  ident: 10.1016/j.bbagen.2013.06.008_bb0025
  article-title: Assessment of the genotoxic and carcinogenic risks of p-nitrophenol when it is present as an impurity in a drug product
  publication-title: Regul. Toxicol. Pharmacol.
  doi: 10.1016/j.yrtph.2009.05.018
– volume: 15
  start-page: 394
  year: 2008
  ident: 10.1016/j.bbagen.2013.06.008_bb0105
  article-title: The zebrafish embryo model in environmental risk assessment—applications beyond acute toxicity testing
  publication-title: Environ. Sci. Pollut. Res. Int.
  doi: 10.1007/s11356-008-0018-z
– volume: 123
  start-page: 226
  year: 1993
  ident: 10.1016/j.bbagen.2013.06.008_bb0215
  article-title: The effect of 2,4-dinitrophenol on the metabolic rate of bobwhite quail
  publication-title: Toxicol. Appl. Pharmacol.
  doi: 10.1006/taap.1993.1241
– volume: 23
  start-page: 858
  year: 1975
  ident: 10.1016/j.bbagen.2013.06.008_bb0075
  article-title: Dissipation of parathion and related compounds from field-sprayed lettuce
  publication-title: J. Agric. Food Chem.
  doi: 10.1021/jf60201a025
– volume: 546
  start-page: 197
  year: 2009
  ident: 10.1016/j.bbagen.2013.06.008_bb0170
  article-title: Zebrafish spotted-microarray for genome-wide expression profiling experiments: data acquisition and analysis
  publication-title: Methods Mol. Biol.
  doi: 10.1007/978-1-60327-977-2_13
– volume: 10
  start-page: 123
  year: 1975
  ident: 10.1016/j.bbagen.2013.06.008_bb0245
  article-title: Effect of aflatoxins on oxidative phosphorylation by rat liver mitochondria
  publication-title: Chem. Biol. Interact.
  doi: 10.1016/0009-2797(75)90106-4
– volume: 14
  start-page: 185
  year: 1989
  ident: 10.1016/j.bbagen.2013.06.008_bb0115
  article-title: Sex-specific reaction of liver ultrastructure in zebra fish (Brachydanio rerio) after prolonged sublethal exposure to 4-nitrophenol
  publication-title: Aquat. Toxicol.
  doi: 10.1016/0166-445X(89)90016-7
– volume: 9
  start-page: 699
  year: 1980
  ident: 10.1016/j.bbagen.2013.06.008_bb0035
  article-title: Uptake, elimination, and metabolism of three phenols by fathead minnows
  publication-title: Arch. Environ. Contam. Toxicol.
  doi: 10.1007/BF01055545
– volume: 13
  start-page: 296
  year: 1987
  ident: 10.1016/j.bbagen.2013.06.008_bb0080
  article-title: Organic priority pollutants in nearshore fish from 14 Lake Michigan tributaries and embayments, 1983
  publication-title: J. Great Lakes Res.
  doi: 10.1016/S0380-1330(87)71653-0
– volume: 27
  start-page: 351
  year: 2006
  ident: 10.1016/j.bbagen.2013.06.008_bb0140
  article-title: Transcriptome kinetics of arsenic-induced adaptive response in zebrafish liver
  publication-title: Physiol. Genomics
  doi: 10.1152/physiolgenomics.00201.2005
– volume: Volume 4
  start-page: 241
  year: 1981
  ident: 10.1016/j.bbagen.2013.06.008_bb0280
– volume: 70
  start-page: 1527
  year: 2004
  ident: 10.1016/j.bbagen.2013.06.008_bb0060
  article-title: Estrogenic activities of nitrophenols in diesel exhaust particles
  publication-title: Biol. Reprod.
  doi: 10.1095/biolreprod.103.024810
– volume: 87
  start-page: 213
  year: 1990
  ident: 10.1016/j.bbagen.2013.06.008_bb0180
  article-title: Uncouplers of oxidative phosphorylation
  publication-title: Environ. Health Perspect.
  doi: 10.1289/ehp.9087213
– volume: 32
  start-page: 1536
  year: 2008
  ident: 10.1016/j.bbagen.2013.06.008_bb0185
  article-title: 2,4-Dinitrophenol induces apoptosis in As4.1 juxtaglomerular cells through rapid depletion of GSH
  publication-title: Cell Biol. Int.
  doi: 10.1016/j.cellbi.2008.08.023
– volume: 12
  start-page: 4609
  year: 2011
  ident: 10.1016/j.bbagen.2013.06.008_bb0255
  article-title: Identification and categorization of liver toxicity markers induced by a related pair of drugs
  publication-title: Int. J. Mol. Sci.
  doi: 10.3390/ijms12074609
– volume: 17
  start-page: 1215
  year: 1987
  ident: 10.1016/j.bbagen.2013.06.008_bb0130
  article-title: The metabolism of phenol and substituted phenols in zebrafish
  publication-title: Xenobiotica
  doi: 10.3109/00498258709167413
– volume: 16
  start-page: 41
  year: 2011
  ident: 10.1016/j.bbagen.2013.06.008_bb0150
  article-title: Molecular conservation of estrogen-response associated with cell cycle regulation, hormonal carcinogenesis and cancer in zebrafish and human cancer cell lines
  publication-title: BMC Med. Genet.
– volume: 217
  start-page: 1
  year: 2006
  ident: 10.1016/j.bbagen.2013.06.008_bb0065
  article-title: Estrogenic and anti-androgenic activities of 4-nitrophenol in diesel exhaust particles
  publication-title: Toxicol. Appl. Pharmacol.
  doi: 10.1016/j.taap.2006.06.010
– volume: 2
  start-page: 255
  year: 2001
  ident: 10.1016/j.bbagen.2013.06.008_bb0295
  article-title: Mitochondrial uncoupling as a target for drug development for the treatment of obesity
  publication-title: Obes. Rev.
  doi: 10.1046/j.1467-789X.2001.00043.x
– volume: 24
  start-page: 73
  year: 2006
  ident: 10.1016/j.bbagen.2013.06.008_bb0090
  article-title: Conservation of gene expression signatures between zebrafish and human liver tumors and tumor progression
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt1169
– volume: 4
  start-page: e1000121
  year: 2008
  ident: 10.1016/j.bbagen.2013.06.008_bb0095
  article-title: Zebrafish whole-adult-organism chemogenomics for large-scale predictive and discovery chemical biology
  publication-title: PLos Genet.
  doi: 10.1371/journal.pgen.1000121
– volume: 136
  start-page: 295S
  year: 2006
  ident: 10.1016/j.bbagen.2013.06.008_bb0225
  article-title: Branched-chain amino acid enriched supplements as therapy for liver disease
  publication-title: J. Nutr.
  doi: 10.1093/jn/136.1.295S
– volume: 97
  start-page: 44
  year: 2007
  ident: 10.1016/j.bbagen.2013.06.008_bb0200
  article-title: Effect of fenofibrate on oxidative DNA damage and on gene expression related to cell proliferation and apoptosis in rats
  publication-title: Toxicol. Sci.
  doi: 10.1093/toxsci/kfm011
– volume: 32
  start-page: 935
  year: 2011
  ident: 10.1016/j.bbagen.2013.06.008_bb0190
  article-title: Fipronil is a powerful uncoupler of oxidative phosphorylation that triggers apoptosis in human neuronal cell line SHSY5Y
  publication-title: Neurotoxicology
  doi: 10.1016/j.neuro.2011.04.006
– volume: 30
  start-page: 3274
  year: 2011
  ident: 10.1016/j.bbagen.2013.06.008_bb0270
  article-title: The balance between rRNA and ribosomal protein synthesis up- and downregulates the tumour suppressor p53 in mammalian cells
  publication-title: Oncogene
  doi: 10.1038/onc.2011.48
– volume: 262
  start-page: C445
  year: 1992
  ident: 10.1016/j.bbagen.2013.06.008_bb0265
  article-title: Regulation of hepatic protein synthesis in chronic inflammation and sepsis
  publication-title: Am. J. Physiol.
  doi: 10.1152/ajpcell.1992.262.2.C445
– volume: 6
  start-page: 102
  year: 1982
  ident: 10.1016/j.bbagen.2013.06.008_bb0120
  article-title: Investigation of the long-term action of xenobiotics on fish with special regard to reproduction
  publication-title: Ecotoxicol. Environ. Saf.
  doi: 10.1016/0147-6513(82)90085-9
– volume: 22
  start-page: 659
  year: 2008
  ident: 10.1016/j.bbagen.2013.06.008_bb0195
  article-title: 2,4-Dinitrophenol induces G1 phase arrest and apoptosis in human pulmonary adenocarcinoma Calu-6 cells
  publication-title: Toxicol. in Vitro
  doi: 10.1016/j.tiv.2007.12.005
– volume: 106
  start-page: 197
  year: 1996
  ident: 10.1016/j.bbagen.2013.06.008_bb0230
  article-title: Serum amino acid changes in rats with thioacetamide-induced liver cirrhosis
  publication-title: Toxicology
  doi: 10.1016/0300-483X(95)03177-H
– volume: 8
  start-page: 108
  year: 2011
  ident: 10.1016/j.bbagen.2013.06.008_bb0290
  article-title: NF-κB in the liver—linking injury, fibrosis and hepatocellular carcinoma
  publication-title: Nat. Rev. Gastroenterol. Hepatol.
  doi: 10.1038/nrgastro.2010.213
– volume: 8
  start-page: R227
  year: 2007
  ident: 10.1016/j.bbagen.2013.06.008_bb0135
  article-title: Transcriptional profiling reveals barcode-like toxicogenomic responses in the zebrafish embryo
  publication-title: Genome Biol.
  doi: 10.1186/gb-2007-8-10-r227
– volume: 9
  start-page: 501
  year: 2009
  ident: 10.1016/j.bbagen.2013.06.008_bb0205
  article-title: Apoptosis and cancer: the genesis of a research field
  publication-title: Nat. Rev. Cancer
  doi: 10.1038/nrc2663
– volume: 5
  start-page: 109
  year: 1988
  ident: 10.1016/j.bbagen.2013.06.008_bb0045
  article-title: Terrestrial bioaccumulation potential of phenolic compounds
  publication-title: Hazard. Waste Hazard. Mater.
  doi: 10.1089/hwm.1988.5.109
– volume: 86
  start-page: 6
  year: 2005
  ident: 10.1016/j.bbagen.2013.06.008_bb0085
  article-title: Zebrafish as a model vertebrate for investigating chemical toxicity
  publication-title: Toxicol. Sci.
  doi: 10.1093/toxsci/kfi110
– start-page: 851
  issue: 6
  year: 1983
  ident: 10.1016/j.bbagen.2013.06.008_bb0125
  article-title: p-Nitrophenol sulfation in rat liver cytosol: multiple forms and substrate inhibition of aryl sulfotransferase
  publication-title: J. Pharm. Dyn.
  doi: 10.1248/bpb1978.6.851
– volume: 37
  start-page: 233
  year: 1981
  ident: 10.1016/j.bbagen.2013.06.008_bb0235
  article-title: Inhibition of rat liver aminoacyl-tRNA synthetases in vitro after acute and chronic aflatoxin B1 administration in vivo
  publication-title: Chem. Biol. Interact.
  doi: 10.1016/0009-2797(81)90180-0
– volume: 10
  start-page: 1
  year: 2007
  ident: 10.1016/j.bbagen.2013.06.008_bb0100
  article-title: Zebrafish as an alternative model organism for disease modelling and drug discovery: implications for the 3Rs
  publication-title: NC3Rs
– volume: 6
  start-page: 111
  year: 2006
  ident: 10.1016/j.bbagen.2013.06.008_bb0285
  article-title: The NF-kappaB regulatory network
  publication-title: Cardiovasc. Toxicol.
  doi: 10.1385/CT:6:2:111
– volume: 26
  start-page: 446
  year: 1981
  ident: 10.1016/j.bbagen.2013.06.008_bb0030
  article-title: Acute toxicity of priority pollutants to bluegill (Lepomis macrochirus)
  publication-title: Bull. Environ. Contam. Toxicol.
  doi: 10.1007/BF01622118
– volume: 36
  start-page: 98
  year: 2009
  ident: 10.1016/j.bbagen.2013.06.008_bb0070
  article-title: 4-Nitrophenol isolated from diesel exhaust particles disrupts regulation of reproductive hormones in immature male rats
  publication-title: Endocrine
  doi: 10.1007/s12020-009-9192-0
– volume: 117
  start-page: 981
  year: 2009
  ident: 10.1016/j.bbagen.2013.06.008_bb0160
  article-title: Perturbation of defense pathways by low-dose arsenic exposure in zebrafish embryos
  publication-title: Environ. Health Perspect.
  doi: 10.1289/ehp.0900555
– volume: 102
  start-page: 15545
  year: 2005
  ident: 10.1016/j.bbagen.2013.06.008_bb0175
  article-title: Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
  doi: 10.1073/pnas.0506580102
SSID ssj0000595
ssj0025309
Score 2.2703323
Snippet 4-Nitrophenol (4-NP) is a prioritized environmental pollutant and its toxicity has been investigated using zebrafish, advocated as an alternative toxicological...
BACKGROUND: 4-Nitrophenol (4-NP) is a prioritized environmental pollutant and its toxicity has been investigated using zebrafish, advocated as an alternative...
SourceID proquest
pubmed
crossref
fao
elsevier
SourceType Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 4778
SubjectTerms 4-Nitrophenol
adults
Animals
apoptosis
cell adhesion
cell cycle
Danio rerio
DNA damage
gene expression
Gene Expression Profiling
gene expression regulation
genes
hepatitis
hepatotoxicity
interleukins
Liver
Liver - drug effects
males
methionine
Microarray
microarray technology
nitrophenols
Nitrophenols - toxicity
Oxidative Phosphorylation
oxidative stress
p-nitrophenol
pollutants
proteasome endopeptidase complex
quantitative polymerase chain reaction
reverse transcriptase polymerase chain reaction
Toxicity
Transcriptome
Transcriptomic
transcriptomics
Zebrafish
Title Molecular insights into 4-nitrophenol-induced hepatotoxicity in zebrafish: Transcriptomic, histological and targeted gene expression analyses
URI https://dx.doi.org/10.1016/j.bbagen.2013.06.008
https://www.ncbi.nlm.nih.gov/pubmed/23791553
https://www.proquest.com/docview/1419342244
https://www.proquest.com/docview/2000081366
Volume 1830
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lb9QwELZKEYILgvLo8qiMxBGzG9txbG7Vimph1R4oK3qzYsdLg6qkalKp7YF_wH9mxk6KkKgqcdnsJnaUeMYz3-y8CHnrtJ9pU2XMB_iQpjRMB10xA7rJgLqusoC5w_sHarGSn4_yow0yH3NhMKxykP1JpkdpPZyZDqs5Pa3r6SE69QBO5OiQ4UpjRrmUBXL5-59_wjwAPuTJkyAZjh7T52KMl3OwabEKaiZiFU9sMvlv9XRnXbY3g9CojPYekYcDiqS76UEfk43QbJF7qa_k5Ra5Px_buD0hv_bHBri0bjo0xTv40rdUMtjNZ1hWoGlPGJjmQOSKHoN66tu-vag94HMYSa_Qtbyuu-MPNCq2KGYwl_kdjcWKB-FJy6aiKa4cbgPvG2i4GKJsG7iItU9C95Ss9j5-nS_Y0IOBeanynokycxzWWCkvsO-bNj53Sigv3VoL6VwRPP6RynPN3Vpi3XKneSilrEyZ-5l4RjabtgnbhGbGIZrSBuZI70EvgukpOGAcp8u84BMixqW3fihQjn0yTuwYifbDJoJZJJiNAXl6Qtj1rNNUoOOW8cVIVfsXo1nQIbfM3AYmsOV3kL52dcixNt8s2rBw6c3IGRbIiz6XsgnteQeWFSBkCThJ3jyGR-CeCaUm5Hliq-tX4aLACv7ixX8_9kvyAH-lAMRXZLM_Ow-vAUj1bifulB1yd_fTcnGAx-WXb8vfZ1odQg
linkProvider Elsevier
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1La9wwEB6SDSW9lDZ9ZPtUoceKXUuyLfcWloZNk91LspCbsGRt4hLsEDuQ5j_kP3dGtlMKDYFejLEkI2ukmW-s0TcAX6x2U50VEXceLyrLM669LniGtilDc11Ens4OL5bJfKV-nManGzAbzsJQWGWv-zudHrR1_2TSj-bksiwnx7Sph3Aipg0Zkeh0E7aInSoewdbeweF8-UchxyH5CtXn1GA4QRfCvKzFdUtEqJEMRJ6UZ_LfFmpzndcP49Bgj_afw7MeSLK9rq8vYMNXO_CkSy35awe2Z0Mmt5dwtxhy4LKyasgbb_CmrZniuKCviFmgqi84euco54Kdo4Vq67a-KR1CdKzJbml3eV02599YsG1B09Bx5q8s8BX3-pPlVcG60HJ8DX6vZ_6mD7StsJDoT3zzClb7309mc96nYeBOJXHLZR5ZgcOcJE5S6jedudgmMnHKrrVU1qbe0b9UEWth14qoy60WPleqyPLYTeVrGFV15XeBRZklQKUzbKOcQ9OI3qcUCHOszuNUjEEOQ29cz1FOqTIuzBCM9tN0AjMkMBNi8vQY-H2ry46j45H66SBV89dcM2hGHmm5i5PA5GeogM3qWBA93zS4sVj0eZgZBsVL2y555evrBp0rBMkKoZJ6uI4I2D2SSTKGN920uv8UIVMi8Zdv_7vbn2B7frI4MkcHy8N38JRKunjE9zBqr679B8RVrf3Yr5vfLqAeUA
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Molecular+insights+into+4-nitrophenol-induced+hepatotoxicity+in+zebrafish%3A+transcriptomic%2C+histological+and+targeted+gene+expression+analyses&rft.jtitle=Biochimica+et+biophysica+acta&rft.au=Lam%2C+Siew+Hong&rft.au=Ung%2C+Choong+Yong&rft.au=Hlaing%2C+Mya+Myintzu&rft.au=Hu%2C+Jing&rft.date=2013-10-01&rft.issn=0006-3002&rft.volume=1830&rft.issue=10&rft.spage=4778&rft_id=info:doi/10.1016%2Fj.bbagen.2013.06.008&rft_id=info%3Apmid%2F23791553&rft.externalDocID=23791553
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0304-4165&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0304-4165&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0304-4165&client=summon