Categorization of the Ocular Microbiome in Japanese Stevens–Johnson Syndrome Patients With Severe Ocular Complications
The commensal microbiota is involved in a variety of diseases. Our group has noticed that patients with Stevens–Johnson syndrome (SJS)/toxic epidermal necrolysis (TEN) often present with persistent inflammation of the ocular surface, even in the chronic stage, and that this inflammation is exacerbat...
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Published in | Frontiers in cellular and infection microbiology Vol. 11; p. 741654 |
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Main Authors | , , , , , , |
Format | Journal Article |
Language | English |
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Frontiers Media S.A
19.11.2021
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ISSN | 2235-2988 2235-2988 |
DOI | 10.3389/fcimb.2021.741654 |
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Abstract | The commensal microbiota is involved in a variety of diseases. Our group has noticed that patients with Stevens–Johnson syndrome (SJS)/toxic epidermal necrolysis (TEN) often present with persistent inflammation of the ocular surface, even in the chronic stage, and that this inflammation is exacerbated by colonization of the mucosa by certain bacteria. However, the changes in the composition of the ocular microbiome in SJS/TEN patients with severe ocular complications (SOCs) remain to be fully investigated. Here, we conducted a cross-sectional study of 46 Japanese subjects comprising 9 healthy control subjects and 37 SJS/TEN patients with SOC. The 16S rRNA-based genetic analyses revealed that the diversity of the ocular microbiome was reduced in SJS/TEN patients with SOC compared with that in healthy control subjects. Principal coordinate analysis based on Bray–Curtis distance at the genus level revealed that the relative composition of the ocular microbiome was different in healthy control subjects and SJS/TEN patients with SOC, and that the SJS/TEN patients with SOC could be divided into four groups based on whether their microbiome was characterized by enrichment of species in genus
Corynebacterium 1
,
Neisseriaceae uncultured
, or
Staphylococcus
or by simultaneous enrichment in species in genera
Propionibacterium
,
Streptococcus
,
Fusobacterium
,
Lawsonella
, and
Serratia
. Collectively, our findings indicate that enrichment of certain bacteria at the ocular surface could be associated with ocular surface inflammation in SJS/TEN patients with SOC. |
---|---|
AbstractList | The commensal microbiota is involved in a variety of diseases. Our group has noticed that patients with Stevens–Johnson syndrome (SJS)/toxic epidermal necrolysis (TEN) often present with persistent inflammation of the ocular surface, even in the chronic stage, and that this inflammation is exacerbated by colonization of the mucosa by certain bacteria. However, the changes in the composition of the ocular microbiome in SJS/TEN patients with severe ocular complications (SOCs) remain to be fully investigated. Here, we conducted a cross-sectional study of 46 Japanese subjects comprising 9 healthy control subjects and 37 SJS/TEN patients with SOC. The 16S rRNA-based genetic analyses revealed that the diversity of the ocular microbiome was reduced in SJS/TEN patients with SOC compared with that in healthy control subjects. Principal coordinate analysis based on Bray–Curtis distance at the genus level revealed that the relative composition of the ocular microbiome was different in healthy control subjects and SJS/TEN patients with SOC, and that the SJS/TEN patients with SOC could be divided into four groups based on whether their microbiome was characterized by enrichment of species in genus Corynebacterium 1, Neisseriaceae uncultured, or Staphylococcus or by simultaneous enrichment in species in genera Propionibacterium, Streptococcus, Fusobacterium, Lawsonella, and Serratia. Collectively, our findings indicate that enrichment of certain bacteria at the ocular surface could be associated with ocular surface inflammation in SJS/TEN patients with SOC. The commensal microbiota is involved in a variety of diseases. Our group has noticed that patients with Stevens-Johnson syndrome (SJS)/toxic epidermal necrolysis (TEN) often present with persistent inflammation of the ocular surface, even in the chronic stage, and that this inflammation is exacerbated by colonization of the mucosa by certain bacteria. However, the changes in the composition of the ocular microbiome in SJS/TEN patients with severe ocular complications (SOCs) remain to be fully investigated. Here, we conducted a cross-sectional study of 46 Japanese subjects comprising 9 healthy control subjects and 37 SJS/TEN patients with SOC. The 16S rRNA-based genetic analyses revealed that the diversity of the ocular microbiome was reduced in SJS/TEN patients with SOC compared with that in healthy control subjects. Principal coordinate analysis based on Bray-Curtis distance at the genus level revealed that the relative composition of the ocular microbiome was different in healthy control subjects and SJS/TEN patients with SOC, and that the SJS/TEN patients with SOC could be divided into four groups based on whether their microbiome was characterized by enrichment of species in genus , , or or by simultaneous enrichment in species in genera , , , , and . Collectively, our findings indicate that enrichment of certain bacteria at the ocular surface could be associated with ocular surface inflammation in SJS/TEN patients with SOC. The commensal microbiota is involved in a variety of diseases. Our group has noticed that patients with Stevens-Johnson syndrome (SJS)/toxic epidermal necrolysis (TEN) often present with persistent inflammation of the ocular surface, even in the chronic stage, and that this inflammation is exacerbated by colonization of the mucosa by certain bacteria. However, the changes in the composition of the ocular microbiome in SJS/TEN patients with severe ocular complications (SOCs) remain to be fully investigated. Here, we conducted a cross-sectional study of 46 Japanese subjects comprising 9 healthy control subjects and 37 SJS/TEN patients with SOC. The 16S rRNA-based genetic analyses revealed that the diversity of the ocular microbiome was reduced in SJS/TEN patients with SOC compared with that in healthy control subjects. Principal coordinate analysis based on Bray-Curtis distance at the genus level revealed that the relative composition of the ocular microbiome was different in healthy control subjects and SJS/TEN patients with SOC, and that the SJS/TEN patients with SOC could be divided into four groups based on whether their microbiome was characterized by enrichment of species in genus Corynebacterium 1, Neisseriaceae uncultured, or Staphylococcus or by simultaneous enrichment in species in genera Propionibacterium, Streptococcus, Fusobacterium, Lawsonella, and Serratia. Collectively, our findings indicate that enrichment of certain bacteria at the ocular surface could be associated with ocular surface inflammation in SJS/TEN patients with SOC.The commensal microbiota is involved in a variety of diseases. Our group has noticed that patients with Stevens-Johnson syndrome (SJS)/toxic epidermal necrolysis (TEN) often present with persistent inflammation of the ocular surface, even in the chronic stage, and that this inflammation is exacerbated by colonization of the mucosa by certain bacteria. However, the changes in the composition of the ocular microbiome in SJS/TEN patients with severe ocular complications (SOCs) remain to be fully investigated. Here, we conducted a cross-sectional study of 46 Japanese subjects comprising 9 healthy control subjects and 37 SJS/TEN patients with SOC. The 16S rRNA-based genetic analyses revealed that the diversity of the ocular microbiome was reduced in SJS/TEN patients with SOC compared with that in healthy control subjects. Principal coordinate analysis based on Bray-Curtis distance at the genus level revealed that the relative composition of the ocular microbiome was different in healthy control subjects and SJS/TEN patients with SOC, and that the SJS/TEN patients with SOC could be divided into four groups based on whether their microbiome was characterized by enrichment of species in genus Corynebacterium 1, Neisseriaceae uncultured, or Staphylococcus or by simultaneous enrichment in species in genera Propionibacterium, Streptococcus, Fusobacterium, Lawsonella, and Serratia. Collectively, our findings indicate that enrichment of certain bacteria at the ocular surface could be associated with ocular surface inflammation in SJS/TEN patients with SOC. The commensal microbiota is involved in a variety of diseases. Our group has noticed that patients with Stevens–Johnson syndrome (SJS)/toxic epidermal necrolysis (TEN) often present with persistent inflammation of the ocular surface, even in the chronic stage, and that this inflammation is exacerbated by colonization of the mucosa by certain bacteria. However, the changes in the composition of the ocular microbiome in SJS/TEN patients with severe ocular complications (SOCs) remain to be fully investigated. Here, we conducted a cross-sectional study of 46 Japanese subjects comprising 9 healthy control subjects and 37 SJS/TEN patients with SOC. The 16S rRNA-based genetic analyses revealed that the diversity of the ocular microbiome was reduced in SJS/TEN patients with SOC compared with that in healthy control subjects. Principal coordinate analysis based on Bray–Curtis distance at the genus level revealed that the relative composition of the ocular microbiome was different in healthy control subjects and SJS/TEN patients with SOC, and that the SJS/TEN patients with SOC could be divided into four groups based on whether their microbiome was characterized by enrichment of species in genus Corynebacterium 1 , Neisseriaceae uncultured , or Staphylococcus or by simultaneous enrichment in species in genera Propionibacterium , Streptococcus , Fusobacterium , Lawsonella , and Serratia . Collectively, our findings indicate that enrichment of certain bacteria at the ocular surface could be associated with ocular surface inflammation in SJS/TEN patients with SOC. |
Author | Hosomi, Koji Ueta, Mayumi Park, Jonguk Kinoshita, Shigeru Sotozono, Chie Kunisawa, Jun Mizuguchi, Kenji |
AuthorAffiliation | 7 Department of Microbiology and Immunology, Kobe University Graduate School of Medicine , Kobe , Japan 3 Laboratory of Bioinformatics, Artificial Intelligence Center for Health and Biomedical Research, National Institutes of Biomedical Innovation, Health and Nutrition (NIBIOHN) , Ibaraki , Japan 6 Graduate School of Medicine, Graduate School of Dentistry, Osaka University , Suita , Japan 4 Institute for Protein Research, Osaka University , Suita , Japan 2 Laboratory of Vaccine Materials, Center for Vaccine and Adjuvant Research and Laboratory of Gut Environmental System, National Institutes of Biomedical Innovation, Health and Nutrition (NIBIOHN) , Ibaraki , Japan 1 Department of Ophthalmology, Kyoto Prefectural University of Medicine , Kyoto , Japan 5 International Research and Development Center for Mucosal Vaccines, The Institute of Medical Science, The University of Tokyo , Tokyo , Japan |
AuthorAffiliation_xml | – name: 3 Laboratory of Bioinformatics, Artificial Intelligence Center for Health and Biomedical Research, National Institutes of Biomedical Innovation, Health and Nutrition (NIBIOHN) , Ibaraki , Japan – name: 4 Institute for Protein Research, Osaka University , Suita , Japan – name: 6 Graduate School of Medicine, Graduate School of Dentistry, Osaka University , Suita , Japan – name: 1 Department of Ophthalmology, Kyoto Prefectural University of Medicine , Kyoto , Japan – name: 2 Laboratory of Vaccine Materials, Center for Vaccine and Adjuvant Research and Laboratory of Gut Environmental System, National Institutes of Biomedical Innovation, Health and Nutrition (NIBIOHN) , Ibaraki , Japan – name: 5 International Research and Development Center for Mucosal Vaccines, The Institute of Medical Science, The University of Tokyo , Tokyo , Japan – name: 7 Department of Microbiology and Immunology, Kobe University Graduate School of Medicine , Kobe , Japan |
Author_xml | – sequence: 1 givenname: Mayumi surname: Ueta fullname: Ueta, Mayumi – sequence: 2 givenname: Koji surname: Hosomi fullname: Hosomi, Koji – sequence: 3 givenname: Jonguk surname: Park fullname: Park, Jonguk – sequence: 4 givenname: Kenji surname: Mizuguchi fullname: Mizuguchi, Kenji – sequence: 5 givenname: Chie surname: Sotozono fullname: Sotozono, Chie – sequence: 6 givenname: Shigeru surname: Kinoshita fullname: Kinoshita, Shigeru – sequence: 7 givenname: Jun surname: Kunisawa fullname: Kunisawa, Jun |
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Cites_doi | 10.1089/10665270050081478 10.1038/nmeth.f.303 10.1016/j.immuni.2015.03.014 10.1007/s00281-014-0452-6 10.1016/j.jaci.2014.12.1916 10.1038/srep04862 10.1016/j.ajo.2006.09.029 10.1167/iovs.10-6939 10.1128/JCM.01741-07 10.1016/j.ajo.2014.06.014 10.1038/s41598-020-75821-z 10.1038/nrmicro.2017.157 10.1099/jmm.0.46810-0 10.3390/microorganisms9020254 10.1016/j.ajo.2015.05.002 10.1186/s12859-019-3187-5 10.1084/jem.20171079 10.3390/ijms22083998 10.1038/srep05981 10.1038/s41577-019-0252-2 10.1097/01.ico.0000263127.84015.3f 10.1136/bcr-2020-237818 10.1016/j.preteyeres.2012.05.003 10.1167/iovs.61.2.47 10.1016/j.medmic.2020.100016 10.1016/j.ophtha.2006.10.029 10.1016/j.ophtha.2008.12.048 10.1093/bioinformatics/btq461 10.1093/nar/gks1219 10.1007/s00357-014-9161-z 10.1186/s12886-017-0612-2 10.1093/nar/gks808 10.1038/s41598-017-04511-0 10.1016/j.jtos.2016.04.004 10.1136/bjo.2006.113449 10.1101/gr.131029.111 |
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Keywords | ocular microbiome Corynebacterium inflammation toxic epidermal necrolysis (TEN) Neisseriaceae Stevens–Johnson syndrome (SJS) Staphylococcus mucosal immunity |
Language | English |
License | Copyright © 2021 Ueta, Hosomi, Park, Mizuguchi, Sotozono, Kinoshita and Kunisawa. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
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References | Hosomi (B9) 2017; 7 Mohsen (B15) 2019; 20 Sotozono (B24) 2009; 116 Kobayashi (B12) 2015; 42 Eguchi (B7) 2008; 46 Klindworth (B11) 2013; 41 Kong (B13) 2012; 22 Sugumaran (B26) 2020; 13 Kugadas (B14) 2016; 14 Deng (B4) 2020; 61 Somerville (B21) 2020; 10 Garrett (B8) 2020; 20 Zhang (B36) 2000; 7 Quast (B19) 2013; 41 Ueta (B34) 2007; 143 Ueta (B32) 2015; 135 Sotozono (B23) 2002; 21 Zegans (B35) 2014; 158 Dong (B5) 2011; 52 Ueta (B31) 2012; 31 Olejniczak-Staruch (B18) 2021; 22 Ridaura (B20) 2018; 215 Ueta (B33) 2007; 91 Teweldemedhin (B27) 2017; 17 Ueta (B29) 2014; 4 Murtagh (B16) 2014; 31 Ueta (B28) 2007; 56 Aoki (B1) 2021; 9 Sotozono (B25) 2015; 160 Caporaso (B3) 2010; 7 Ueta (B30) 2014; 4 Byrd (B2) 2018; 16 Edgar (B6) 2010; 26 Hsu (B10) 2020; 4 Nakamizo (B17) 2015; 37 Sotozono (B22) 2007; 114 |
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Snippet | The commensal microbiota is involved in a variety of diseases. Our group has noticed that patients with Stevens–Johnson syndrome (SJS)/toxic epidermal... The commensal microbiota is involved in a variety of diseases. Our group has noticed that patients with Stevens-Johnson syndrome (SJS)/toxic epidermal... |
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SubjectTerms | Cellular and Infection Microbiology Corynebacterium Cross-Sectional Studies Humans Japan Microbiota mucosal immunity Neisseriaceae ocular microbiome RNA, Ribosomal, 16S - genetics Staphylococcus Stevens-Johnson Syndrome Stevens–Johnson syndrome (SJS) |
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Title | Categorization of the Ocular Microbiome in Japanese Stevens–Johnson Syndrome Patients With Severe Ocular Complications |
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