Vesicle-based cell-free synthesis of short and long unspecific peroxygenases
Unspecific peroxygenases (UPOs, EC 1.11.2.1) are fungal enzymes that catalyze the oxyfunctionalization of non-activated hydrocarbons, making them valuable biocatalysts. Despite the increasing interest in UPOs that has led to the identification of thousands of putative UPO genes, only a few of these...
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Published in | Frontiers in bioengineering and biotechnology Vol. 10; p. 964396 |
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Main Authors | , , , , |
Format | Journal Article |
Language | English |
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01.11.2022
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Abstract | Unspecific peroxygenases (UPOs, EC 1.11.2.1) are fungal enzymes that catalyze the oxyfunctionalization of non-activated hydrocarbons, making them valuable biocatalysts. Despite the increasing interest in UPOs that has led to the identification of thousands of putative UPO genes, only a few of these have been successfully expressed and characterized. There is currently no universal expression system in place to explore their full potential. Cell-free protein synthesis has proven to be a sophisticated technique for the synthesis of difficult-to-express proteins. In this work, we aimed to establish an insect-based cell-free protein synthesis (CFPS) platform to produce UPOs. CFPS relies on translationally active cell lysates rather than living cells. The system parameters can thus be directly manipulated without having to account for cell viability, thereby making it highly adaptable. The insect-based lysate contains translocationally active, ER-derived vesicles, called microsomes. These microsomes have been shown to allow efficient translocation of proteins into their lumen, promoting post-translational modifications such as disulfide bridge formation and N-glycosylations. In this study the ability of a redox optimized, vesicle-based, eukaryotic CFPS system to synthesize functional UPOs was explored. The influence of different reaction parameters as well as the influence of translocation on enzyme activity was evaluated for a short UPO from
Marasmius rotula
and a long UPO from
Agrocybe aegerita
. The capability of the CFPS system described here was demonstrated by the successful synthesis of a novel UPO from
Podospora anserina
, thus qualifying CFPS as a promising tool for the identification and evaluation of novel UPOs and variants thereof. |
---|---|
AbstractList | Unspecific peroxygenases (UPOs, EC 1.11.2.1) are fungal enzymes that catalyze the oxyfunctionalization of non-activated hydrocarbons, making them valuable biocatalysts. Despite the increasing interest in UPOs that has led to the identification of thousands of putative UPO genes, only a few of these have been successfully expressed and characterized. There is currently no universal expression system in place to explore their full potential. Cell-free protein synthesis has proven to be a sophisticated technique for the synthesis of difficult-to-express proteins. In this work, we aimed to establish an insect-based cell-free protein synthesis (CFPS) platform to produce UPOs. CFPS relies on translationally active cell lysates rather than living cells. The system parameters can thus be directly manipulated without having to account for cell viability, thereby making it highly adaptable. The insect-based lysate contains translocationally active, ER-derived vesicles, called microsomes. These microsomes have been shown to allow efficient translocation of proteins into their lumen, promoting post-translational modifications such as disulfide bridge formation and N-glycosylations. In this study the ability of a redox optimized, vesicle-based, eukaryotic CFPS system to synthesize functional UPOs was explored. The influence of different reaction parameters as well as the influence of translocation on enzyme activity was evaluated for a short UPO from Marasmius rotula and a long UPO from Agrocybe aegerita. The capability of the CFPS system described here was demonstrated by the successful synthesis of a novel UPO from Podospora anserina, thus qualifying CFPS as a promising tool for the identification and evaluation of novel UPOs and variants thereof.Unspecific peroxygenases (UPOs, EC 1.11.2.1) are fungal enzymes that catalyze the oxyfunctionalization of non-activated hydrocarbons, making them valuable biocatalysts. Despite the increasing interest in UPOs that has led to the identification of thousands of putative UPO genes, only a few of these have been successfully expressed and characterized. There is currently no universal expression system in place to explore their full potential. Cell-free protein synthesis has proven to be a sophisticated technique for the synthesis of difficult-to-express proteins. In this work, we aimed to establish an insect-based cell-free protein synthesis (CFPS) platform to produce UPOs. CFPS relies on translationally active cell lysates rather than living cells. The system parameters can thus be directly manipulated without having to account for cell viability, thereby making it highly adaptable. The insect-based lysate contains translocationally active, ER-derived vesicles, called microsomes. These microsomes have been shown to allow efficient translocation of proteins into their lumen, promoting post-translational modifications such as disulfide bridge formation and N-glycosylations. In this study the ability of a redox optimized, vesicle-based, eukaryotic CFPS system to synthesize functional UPOs was explored. The influence of different reaction parameters as well as the influence of translocation on enzyme activity was evaluated for a short UPO from Marasmius rotula and a long UPO from Agrocybe aegerita. The capability of the CFPS system described here was demonstrated by the successful synthesis of a novel UPO from Podospora anserina, thus qualifying CFPS as a promising tool for the identification and evaluation of novel UPOs and variants thereof. Unspecific peroxygenases (UPOs, EC 1.11.2.1) are fungal enzymes that catalyze the oxyfunctionalization of non-activated hydrocarbons, making them valuable biocatalysts. Despite the increasing interest in UPOs that has led to the identification of thousands of putative UPO genes, only a few of these have been successfully expressed and characterized. There is currently no universal expression system in place to explore their full potential. Cell-free protein synthesis has proven to be a sophisticated technique for the synthesis of difficult-to-express proteins. In this work, we aimed to establish an insect-based cell-free protein synthesis (CFPS) platform to produce UPOs. CFPS relies on translationally active cell lysates rather than living cells. The system parameters can thus be directly manipulated without having to account for cell viability, thereby making it highly adaptable. The insect-based lysate contains translocationally active, ER-derived vesicles, called microsomes. These microsomes have been shown to allow efficient translocation of proteins into their lumen, promoting post-translational modifications such as disulfide bridge formation and N-glycosylations. In this study the ability of a redox optimized, vesicle-based, eukaryotic CFPS system to synthesize functional UPOs was explored. The influence of different reaction parameters as well as the influence of translocation on enzyme activity was evaluated for a short UPO from Marasmius rotula and a long UPO from Agrocybe aegerita. The capability of the CFPS system described here was demonstrated by the successful synthesis of a novel UPO from Podospora anserina, thus qualifying CFPS as a promising tool for the identification and evaluation of novel UPOs and variants thereof. Unspecific peroxygenases (UPOs, EC 1.11.2.1) are fungal enzymes that catalyze the oxyfunctionalization of non-activated hydrocarbons, making them valuable biocatalysts. Despite the increasing interest in UPOs that has led to the identification of thousands of putative UPO genes, only a few of these have been successfully expressed and characterized. There is currently no universal expression system in place to explore their full potential. Cell-free protein synthesis has proven to be a sophisticated technique for the synthesis of difficult-to-express proteins. In this work, we aimed to establish an insect-based cell-free protein synthesis (CFPS) platform to produce UPOs. CFPS relies on translationally active cell lysates rather than living cells. The system parameters can thus be directly manipulated without having to account for cell viability, thereby making it highly adaptable. The insect-based lysate contains translocationally active, ER-derived vesicles, called microsomes. These microsomes have been shown to allow efficient translocation of proteins into their lumen, promoting post-translational modifications such as disulfide bridge formation and N-glycosylations. In this study the ability of a redox optimized, vesicle-based, eukaryotic CFPS system to synthesize functional UPOs was explored. The influence of different reaction parameters as well as the influence of translocation on enzyme activity was evaluated for a short UPO from Marasmius rotula and a long UPO from Agrocybe aegerita . The capability of the CFPS system described here was demonstrated by the successful synthesis of a novel UPO from Podospora anserina , thus qualifying CFPS as a promising tool for the identification and evaluation of novel UPOs and variants thereof. Unspecific peroxygenases (UPOs, EC 1.11.2.1) are fungal enzymes that catalyze the oxyfunctionalization of non-activated hydrocarbons, making them valuable biocatalysts. Despite the increasing interest in UPOs that has led to the identification of thousands of putative UPO genes, only a few of these have been successfully expressed and characterized. There is currently no universal expression system in place to explore their full potential. Cell-free protein synthesis has proven to be a sophisticated technique for the synthesis of difficult-to-express proteins. In this work, we aimed to establish an insect-based cell-free protein synthesis (CFPS) platform to produce UPOs. CFPS relies on translationally active cell lysates rather than living cells. The system parameters can thus be directly manipulated without having to account for cell viability, thereby making it highly adaptable. The insect-based lysate contains translocationally active, ER-derived vesicles, called microsomes. These microsomes have been shown to allow efficient translocation of proteins into their lumen, promoting post-translational modifications such as disulfide bridge formation and N-glycosylations. In this study the ability of a redox optimized, vesicle-based, eukaryotic CFPS system to synthesize functional UPOs was explored. The influence of different reaction parameters as well as the influence of translocation on enzyme activity was evaluated for a short UPO from and a long UPO from . The capability of the CFPS system described here was demonstrated by the successful synthesis of a novel UPO from , thus qualifying CFPS as a promising tool for the identification and evaluation of novel UPOs and variants thereof. |
Author | Schramm, Marina Kiebist, Jan Walter, Ruben Magnus Zemella, Anne Kubick, Stefan |
AuthorAffiliation | 3 Freie Universität Berlin , Institute of Chemistry and Biochemistry – Biochemistry , Berlin , Germany 1 Fraunhofer Institute for Cell Therapy and Immunology (IZI) , Branch Bioanalytics and Bioprocesses (IZI-BB) , Potsdam , Germany 4 Faculty of Health Sciences , Joint Faculty of the Brandenburg University of Technology Cottbus – Senftenberg , The Brandenburg Medical School Theodor Fontane , University of Potsdam , Potsdam , Germany 2 Institute of Biotechnology , Brandenburg University of Technology Cottbus-Senftenberg , Senftenberg , Germany |
AuthorAffiliation_xml | – name: 2 Institute of Biotechnology , Brandenburg University of Technology Cottbus-Senftenberg , Senftenberg , Germany – name: 4 Faculty of Health Sciences , Joint Faculty of the Brandenburg University of Technology Cottbus – Senftenberg , The Brandenburg Medical School Theodor Fontane , University of Potsdam , Potsdam , Germany – name: 1 Fraunhofer Institute for Cell Therapy and Immunology (IZI) , Branch Bioanalytics and Bioprocesses (IZI-BB) , Potsdam , Germany – name: 3 Freie Universität Berlin , Institute of Chemistry and Biochemistry – Biochemistry , Berlin , Germany |
Author_xml | – sequence: 1 givenname: Ruben Magnus surname: Walter fullname: Walter, Ruben Magnus – sequence: 2 givenname: Anne surname: Zemella fullname: Zemella, Anne – sequence: 3 givenname: Marina surname: Schramm fullname: Schramm, Marina – sequence: 4 givenname: Jan surname: Kiebist fullname: Kiebist, Jan – sequence: 5 givenname: Stefan surname: Kubick fullname: Kubick, Stefan |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/36394036$$D View this record in MEDLINE/PubMed |
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Copyright | Copyright © 2022 Walter, Zemella, Schramm, Kiebist and Kubick. Copyright © 2022 Walter, Zemella, Schramm, Kiebist and Kubick. 2022 Walter, Zemella, Schramm, Kiebist and Kubick |
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Keywords | enzymes cell-free protein synthesis unspecific peroxygenases in vitro transcription/translation insect cell lysate |
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License | Copyright © 2022 Walter, Zemella, Schramm, Kiebist and Kubick. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
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Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 Edited by: Tajalli Keshavarz, University of Westminster, United Kingdom This article was submitted to Bioprocess Engineering, a section of the journal Frontiers in Bioengineering and Biotechnology Tony Collins, University of Minho, Portugal Reviewed by: Jiangang Yang, Tianjin Institute of Industrial Biotechnology (CAS), China |
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Title | Vesicle-based cell-free synthesis of short and long unspecific peroxygenases |
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