Transcriptome Analysis of the Global Response of Pseudomonas fragi NMC25 to Modified Atmosphere Packaging Stress

is usually isolated from chilled meats in relation to their spoilage, while many studies have shown that the application of modified atmosphere packaging (MAP) inhibits the spoilage potential of . The effects of MAP on NMC25 metabolism were determined in the present study by exposing this organism t...

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Published inFrontiers in microbiology Vol. 9; p. 1277
Main Authors Wang, Guangyu, Ma, Fang, Chen, Xiaojing, Han, Yanqing, Wang, Huhu, Xu, Xinglian, Zhou, Guanghong
Format Journal Article
LanguageEnglish
Published Switzerland Frontiers Media S.A 11.06.2018
Subjects
cell metabolism
Microbiology
modified atmosphere packaging
Pseudomonas fragi
spoilage
transcriptome
modified atmosphere packaging
cell metabolism
Pseudomonas fragi
transcriptome
spoilage
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Abstract is usually isolated from chilled meats in relation to their spoilage, while many studies have shown that the application of modified atmosphere packaging (MAP) inhibits the spoilage potential of . The effects of MAP on NMC25 metabolism were determined in the present study by exposing this organism to different air conditions and comparing the resulting transcriptome profiles. We found 559 differentially expressed genes by RNA-seq, and the results revealed that MAP decreases the expression of genes involved in the electron transport chain ( ), resulting in an inhibition of aerobic respiration. Meanwhile, MAP also induced the downregulation of genes responsible for ATP-binding cassette transporters, flagellar and type I fimbrial proteins, and DNA replication and repair, which may further influence nutrient uptake, motility, and growth. In addition, NMC25 cells modified their pathways for energy production, amino acid synthesis, membrane lipid composition, and other metabolic patterns to adapt to MAP. These data show that NMC25 survives under MAP but reduces part of its metabolism related to its spoilage ability.
AbstractList is usually isolated from chilled meats in relation to their spoilage, while many studies have shown that the application of modified atmosphere packaging (MAP) inhibits the spoilage potential of . The effects of MAP on NMC25 metabolism were determined in the present study by exposing this organism to different air conditions and comparing the resulting transcriptome profiles. We found 559 differentially expressed genes by RNA-seq, and the results revealed that MAP decreases the expression of genes involved in the electron transport chain ( ), resulting in an inhibition of aerobic respiration. Meanwhile, MAP also induced the downregulation of genes responsible for ATP-binding cassette transporters, flagellar and type I fimbrial proteins, and DNA replication and repair, which may further influence nutrient uptake, motility, and growth. In addition, NMC25 cells modified their pathways for energy production, amino acid synthesis, membrane lipid composition, and other metabolic patterns to adapt to MAP. These data show that NMC25 survives under MAP but reduces part of its metabolism related to its spoilage ability.
Pseudomonas fragi is usually isolated from chilled meats in relation to their spoilage, while many studies have shown that the application of modified atmosphere packaging (MAP) inhibits the spoilage potential of P. fragi. The effects of MAP on P. fragi NMC25 metabolism were determined in the present study by exposing this organism to different air conditions and comparing the resulting transcriptome profiles. We found 559 differentially expressed genes by RNA-seq, and the results revealed that MAP decreases the expression of genes involved in the electron transport chain (nuoAB), resulting in an inhibition of aerobic respiration. Meanwhile, MAP also induced the downregulation of genes responsible for ATP-binding cassette transporters, flagellar and type I fimbrial proteins, and DNA replication and repair, which may further influence nutrient uptake, motility, and growth. In addition, NMC25 cells modified their pathways for energy production, amino acid synthesis, membrane lipid composition, and other metabolic patterns to adapt to MAP. These data show that P. fragi NMC25 survives under MAP but reduces part of its metabolism related to its spoilage ability.
Pseudomonas fragi is usually isolated from chilled meats in relation to their spoilage, while many studies have shown that the application of modified atmosphere packaging (MAP) inhibits the spoilage potential of P. fragi . The effects of MAP on P. fragi NMC25 metabolism were determined in the present study by exposing this organism to different air conditions and comparing the resulting transcriptome profiles. We found 559 differentially expressed genes by RNA-seq, and the results revealed that MAP decreases the expression of genes involved in the electron transport chain ( nuoAB ), resulting in an inhibition of aerobic respiration. Meanwhile, MAP also induced the downregulation of genes responsible for ATP-binding cassette transporters, flagellar and type I fimbrial proteins, and DNA replication and repair, which may further influence nutrient uptake, motility, and growth. In addition, NMC25 cells modified their pathways for energy production, amino acid synthesis, membrane lipid composition, and other metabolic patterns to adapt to MAP. These data show that P. fragi NMC25 survives under MAP but reduces part of its metabolism related to its spoilage ability.
Author Wang, Huhu
Chen, Xiaojing
Han, Yanqing
Zhou, Guanghong
Xu, Xinglian
Ma, Fang
Wang, Guangyu
AuthorAffiliation 4 Jiangsu Province Physical and Chemical Testing Center , Nanjing , China
2 College of Veterinary Medicine, Nanjing Agricultural University , Nanjing , China
1 Key Laboratory of Meat Processing and Quality Control, Nanjing Agricultural University , Nanjing , China
3 Jiangsu Collaborative Innovation Center of Meat Production and Processing, Quality and Safety Control, College of Food Science and Technology, Nanjing Agricultural University , Nanjing , China
AuthorAffiliation_xml – name: 4 Jiangsu Province Physical and Chemical Testing Center , Nanjing , China
– name: 2 College of Veterinary Medicine, Nanjing Agricultural University , Nanjing , China
– name: 1 Key Laboratory of Meat Processing and Quality Control, Nanjing Agricultural University , Nanjing , China
– name: 3 Jiangsu Collaborative Innovation Center of Meat Production and Processing, Quality and Safety Control, College of Food Science and Technology, Nanjing Agricultural University , Nanjing , China
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Keywords modified atmosphere packaging
cell metabolism
Pseudomonas fragi
transcriptome
spoilage
Language English
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This article was submitted to Food Microbiology, a section of the journal Frontiers in Microbiology
Reviewed by: Konstantinos Papadimitriou, Agricultural University of Athens, Greece; Rosanna Tofalo, Università degli Studi di Teramo, Italy
Edited by: Giovanna Suzzi, Università degli Studi di Teramo, Italy
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Snippet is usually isolated from chilled meats in relation to their spoilage, while many studies have shown that the application of modified atmosphere packaging (MAP)...
Pseudomonas fragi is usually isolated from chilled meats in relation to their spoilage, while many studies have shown that the application of modified...
Pseudomonas fragi is usually isolated from chilled meats in relation to their spoilage, while many studies have shown that the application of modified...
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StartPage 1277
SubjectTerms cell metabolism
Microbiology
modified atmosphere packaging
Pseudomonas fragi
spoilage
transcriptome
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Title Transcriptome Analysis of the Global Response of Pseudomonas fragi NMC25 to Modified Atmosphere Packaging Stress
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