Height to first pod: A review of genetic and breeding approaches to improve combine harvesting in legume crops

Height from soil at the base of plant to the first pod (HFP) is an important trait for mechanical harvesting of legume crops. To minimise the loss of pods, the HFP must be higher than that of the blades of most combine harvesters. Here, we review the genetic control, morphology, and variability of H...

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Published inFrontiers in plant science Vol. 13; p. 948099
Main Authors Kuzbakova, Marzhan, Khassanova, Gulmira, Oshergina, Irina, Ten, Evgeniy, Jatayev, Satyvaldy, Yerzhebayeva, Raushan, Bulatova, Kulpash, Khalbayeva, Sholpan, Schramm, Carly, Anderson, Peter, Sweetman, Crystal, Jenkins, Colin L D, Soole, Kathleen L, Shavrukov, Yuri
Format Journal Article
LanguageEnglish
Published Switzerland Frontiers Media S.A 16.09.2022
Subjects
auxin transport and signal transduction genes
BEBT or WD40 genes
candidate genes
gene expression
height to the first pod
MADS box gene SOC1
Plant Science
auxin transport and signal transduction genes
BEBT or WD40 genes
height to the first pod
candidate genes
QTL analysis
MADS box gene SOC1
gene expression
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Abstract Height from soil at the base of plant to the first pod (HFP) is an important trait for mechanical harvesting of legume crops. To minimise the loss of pods, the HFP must be higher than that of the blades of most combine harvesters. Here, we review the genetic control, morphology, and variability of HFP in legumes and attempt to unravel the diverse terminology for this trait in the literature. HFP is directly related to node number and internode length but through different mechanisms. The phenotypic diversity and heritability of HFP and their correlations with plant height are very high among studied legumes. Only a few publications describe a QTL analysis where candidate genes for HFP with confirmed gene expression have been mapped. They include major QTLs with eight candidate genes for HFP, which are involved in auxin transport and signal transduction in soybean [ (L.) Merr.] as well as MADS box gene in , and or genes located nearby in the mapped QTL in common bean ( L.). There is no information available about simple and efficient markers associated with HFP, which can be used for marker-assisted selection for this trait in practical breeding, which is still required in the nearest future. To our best knowledge, this is the first review to focus on this significant challenge in legume-based cropping systems.
AbstractList Height from soil at the base of plant to the first pod (HFP) is an important trait for mechanical harvesting of legume crops. To minimise the loss of pods, the HFP must be higher than that of the blades of most combine harvesters. Here, we review the genetic control, morphology, and variability of HFP in legumes and attempt to unravel the diverse terminology for this trait in the literature. HFP is directly related to node number and internode length but through different mechanisms. The phenotypic diversity and heritability of HFP and their correlations with plant height are very high among studied legumes. Only a few publications describe a QTL analysis where candidate genes for HFP with confirmed gene expression have been mapped. They include major QTLs with eight candidate genes for HFP, which are involved in auxin transport and signal transduction in soybean [ (L.) Merr.] as well as MADS box gene in , and or genes located nearby in the mapped QTL in common bean ( L.). There is no information available about simple and efficient markers associated with HFP, which can be used for marker-assisted selection for this trait in practical breeding, which is still required in the nearest future. To our best knowledge, this is the first review to focus on this significant challenge in legume-based cropping systems.
Height from soil at the base of plant to the first pod (HFP) is an important trait for mechanical harvesting of legume crops. To minimise the loss of pods, the HFP must be higher than that of the blades of most combine harvesters. Here, we review the genetic control, morphology, and variability of HFP in legumes and attempt to unravel the diverse terminology for this trait in the literature. HFP is directly related to node number and internode length but through different mechanisms. The phenotypic diversity and heritability of HFP and their correlations with plant height are very high among studied legumes. Only a few publications describe a QTL analysis where candidate genes for HFP with confirmed gene expression have been mapped. They include major QTLs with eight candidate genes for HFP, which are involved in auxin transport and signal transduction in soybean [ Glycine max (L.) Merr.] as well as MADS box gene SOC1 in Medicago trancatula , and BEBT or WD40 genes located nearby in the mapped QTL in common bean ( Phaseolus vulgaris L.). There is no information available about simple and efficient markers associated with HFP, which can be used for marker-assisted selection for this trait in practical breeding, which is still required in the nearest future. To our best knowledge, this is the first review to focus on this significant challenge in legume-based cropping systems.
Height from soil at the base of plant to the first pod (HFP) is an important trait for mechanical harvesting of legume crops. To minimise the loss of pods, the HFP must be higher than that of the blades of most combine harvesters. Here, we review the genetic control, morphology, and variability of HFP in legumes and attempt to unravel the diverse terminology for this trait in the literature. HFP is directly related to node number and internode length but through different mechanisms. The phenotypic diversity and heritability of HFP and their correlations with plant height are very high among studied legumes. Only a few publications describe a QTL analysis where candidate genes for HFP with confirmed gene expression have been mapped. They include major QTLs with eight candidate genes for HFP, which are involved in auxin transport and signal transduction in soybean [Glycine max (L.) Merr.] as well as MADS box gene SOC1 in Medicago trancatula, and BEBT or WD40 genes located nearby in the mapped QTL in common bean (Phaseolus vulgaris L.). There is no information available about simple and efficient markers associated with HFP, which can be used for marker-assisted selection for this trait in practical breeding, which is still required in the nearest future. To our best knowledge, this is the first review to focus on this significant challenge in legume-based cropping systems.
Author Khassanova, Gulmira
Anderson, Peter
Kuzbakova, Marzhan
Sweetman, Crystal
Oshergina, Irina
Shavrukov, Yuri
Jatayev, Satyvaldy
Khalbayeva, Sholpan
Jenkins, Colin L D
Yerzhebayeva, Raushan
Bulatova, Kulpash
Soole, Kathleen L
Ten, Evgeniy
Schramm, Carly
AuthorAffiliation 3 Kazakh Research Institute of Agriculture and Plant Growing , Almalybak , Kazakhstan
4 College of Science and Engineering, Biological Sciences, Flinders University , Adelaide, SA , Australia
1 Faculty of Agronomy, S. Seifullin Kazakh Agro Technical University , Nur-Sultan , Kazakhstan
2 A.I. Barayev Research and Production Centre of Grain Farming , Shortandy , Kazakhstan
AuthorAffiliation_xml – name: 1 Faculty of Agronomy, S. Seifullin Kazakh Agro Technical University , Nur-Sultan , Kazakhstan
– name: 4 College of Science and Engineering, Biological Sciences, Flinders University , Adelaide, SA , Australia
– name: 3 Kazakh Research Institute of Agriculture and Plant Growing , Almalybak , Kazakhstan
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BackLink https://www.ncbi.nlm.nih.gov/pubmed/36186054$$D View this record in MEDLINE/PubMed
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Copyright Copyright © 2022 Kuzbakova, Khassanova, Oshergina, Ten, Jatayev, Yerzhebayeva, Bulatova, Khalbayeva, Schramm, Anderson, Sweetman, Jenkins, Soole and Shavrukov.
Copyright © 2022 Kuzbakova, Khassanova, Oshergina, Ten, Jatayev, Yerzhebayeva, Bulatova, Khalbayeva, Schramm, Anderson, Sweetman, Jenkins, Soole and Shavrukov. 2022 Kuzbakova, Khassanova, Oshergina, Ten, Jatayev, Yerzhebayeva, Bulatova, Khalbayeva, Schramm, Anderson, Sweetman, Jenkins, Soole and Shavrukov
Copyright_xml – notice: Copyright © 2022 Kuzbakova, Khassanova, Oshergina, Ten, Jatayev, Yerzhebayeva, Bulatova, Khalbayeva, Schramm, Anderson, Sweetman, Jenkins, Soole and Shavrukov.
– notice: Copyright © 2022 Kuzbakova, Khassanova, Oshergina, Ten, Jatayev, Yerzhebayeva, Bulatova, Khalbayeva, Schramm, Anderson, Sweetman, Jenkins, Soole and Shavrukov. 2022 Kuzbakova, Khassanova, Oshergina, Ten, Jatayev, Yerzhebayeva, Bulatova, Khalbayeva, Schramm, Anderson, Sweetman, Jenkins, Soole and Shavrukov
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Keywords auxin transport and signal transduction genes
BEBT or WD40 genes
height to the first pod
candidate genes
QTL analysis
MADS box gene SOC1
gene expression
Language English
License Copyright © 2022 Kuzbakova, Khassanova, Oshergina, Ten, Jatayev, Yerzhebayeva, Bulatova, Khalbayeva, Schramm, Anderson, Sweetman, Jenkins, Soole and Shavrukov.
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Reviewed by: Gaia Cortinovis, Marche Polytechnic University, Italy; Juan M. Osorno, North Dakota State University, United States
This article was submitted to Plant Breeding, a section of the journal Frontiers in Plant Science
Edited by: Francesca Sparvoli, Institute of Agricultural Biology and Biotechnology (CNR), Italy
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Snippet Height from soil at the base of plant to the first pod (HFP) is an important trait for mechanical harvesting of legume crops. To minimise the loss of pods, the...
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SubjectTerms auxin transport and signal transduction genes
BEBT or WD40 genes
candidate genes
gene expression
height to the first pod
MADS box gene SOC1
Plant Science
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Title Height to first pod: A review of genetic and breeding approaches to improve combine harvesting in legume crops
URI https://www.ncbi.nlm.nih.gov/pubmed/36186054
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