Bacterial N-Glycosylation Efficiency Is Dependent on the Structural Context of Target Sequons

Site selectivity of protein N-linked glycosylation is dependent on many factors, including accessibility of the modification site, amino acid composition of the glycosylation consensus sequence, and cellular localization of target proteins. Previous studies have shown that the bacterial oligosacchar...

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Published inThe Journal of biological chemistry Vol. 291; no. 42; pp. 22001 - 22010
Main Authors Silverman, Julie Michelle, Imperiali, Barbara
Format Journal Article
LanguageEnglish
Published United States American Society for Biochemistry and Molecular Biology 14.10.2016
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Abstract Site selectivity of protein N-linked glycosylation is dependent on many factors, including accessibility of the modification site, amino acid composition of the glycosylation consensus sequence, and cellular localization of target proteins. Previous studies have shown that the bacterial oligosaccharyltransferase, PglB, of Campylobacter jejuni favors acceptor proteins with consensus sequences ((D/E)X NX (S/T), where X ≠ proline) in flexible, solvent-exposed motifs; however, several native glycoproteins are known to harbor consensus sequences within structured regions of the acceptor protein, suggesting that unfolding or partial unfolding is required for efficient N-linked glycosylation in the native environment. To derive insight into these observations, we generated structural homology models of the N-linked glycoproteome of C. jejuni This evaluation highlights the potential diversity of secondary structural conformations of previously identified N-linked glycosylation sequons. Detailed assessment of PglB activity with a structurally characterized acceptor protein, PEB3, demonstrated that this natively folded substrate protein is not efficiently glycosylated in vitro, whereas structural destabilization increases glycosylation efficiency. Furthermore, in vivo glycosylation studies in both glyco-competent Escherichia coli and the native system, C. jejuni, revealed that efficient glycosylation of glycoproteins, AcrA and PEB3, depends on translocation to the periplasmic space via the general secretory pathway. Our studies provide quantitative evidence that many acceptor proteins are likely to be N-linked-glycosylated before complete folding and suggest that PglB activity is coupled to general secretion-mediated translocation to the periplasm. This work extends our understanding of the molecular mechanisms underlying N-linked glycosylation in bacteria.
AbstractList Site selectivity of protein N -linked glycosylation is dependent on many factors, including accessibility of the modification site, amino acid composition of the glycosylation consensus sequence, and cellular localization of target proteins. Previous studies have shown that the bacterial oligosaccharyltransferase, PglB, of Campylobacter jejuni favors acceptor proteins with consensus sequences ((D/E) X 1 N X 2 (S/T), where X 1,2 ≠ proline) in flexible, solvent-exposed motifs; however, several native glycoproteins are known to harbor consensus sequences within structured regions of the acceptor protein, suggesting that unfolding or partial unfolding is required for efficient N -linked glycosylation in the native environment. To derive insight into these observations, we generated structural homology models of the N -linked glycoproteome of C. jejuni . This evaluation highlights the potential diversity of secondary structural conformations of previously identified N -linked glycosylation sequons. Detailed assessment of PglB activity with a structurally characterized acceptor protein, PEB3, demonstrated that this natively folded substrate protein is not efficiently glycosylated in vitro , whereas structural destabilization increases glycosylation efficiency. Furthermore, in vivo glycosylation studies in both glyco-competent Escherichia coli and the native system, C. jejuni , revealed that efficient glycosylation of glycoproteins, AcrA and PEB3, depends on translocation to the periplasmic space via the general secretory pathway. Our studies provide quantitative evidence that many acceptor proteins are likely to be N -linked-glycosylated before complete folding and suggest that PglB activity is coupled to general secretion-mediated translocation to the periplasm. This work extends our understanding of the molecular mechanisms underlying N -linked glycosylation in bacteria.
Site selectivity of protein N-linked glycosylation is dependent on many factors, including accessibility of the modification site, amino acid composition of the glycosylation consensus sequence, and cellular localization of target proteins. Previous studies have shown that the bacterial oligosaccharyltransferase, PglB, of Campylobacter jejuni favors acceptor proteins with consensus sequences ((D/E)X NX (S/T), where X ≠ proline) in flexible, solvent-exposed motifs; however, several native glycoproteins are known to harbor consensus sequences within structured regions of the acceptor protein, suggesting that unfolding or partial unfolding is required for efficient N-linked glycosylation in the native environment. To derive insight into these observations, we generated structural homology models of the N-linked glycoproteome of C. jejuni This evaluation highlights the potential diversity of secondary structural conformations of previously identified N-linked glycosylation sequons. Detailed assessment of PglB activity with a structurally characterized acceptor protein, PEB3, demonstrated that this natively folded substrate protein is not efficiently glycosylated in vitro, whereas structural destabilization increases glycosylation efficiency. Furthermore, in vivo glycosylation studies in both glyco-competent Escherichia coli and the native system, C. jejuni, revealed that efficient glycosylation of glycoproteins, AcrA and PEB3, depends on translocation to the periplasmic space via the general secretory pathway. Our studies provide quantitative evidence that many acceptor proteins are likely to be N-linked-glycosylated before complete folding and suggest that PglB activity is coupled to general secretion-mediated translocation to the periplasm. This work extends our understanding of the molecular mechanisms underlying N-linked glycosylation in bacteria.
Author Silverman, Julie Michelle
Imperiali, Barbara
Author_xml – sequence: 1
  givenname: Julie Michelle
  surname: Silverman
  fullname: Silverman, Julie Michelle
  organization: From the Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139
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  givenname: Barbara
  surname: Imperiali
  fullname: Imperiali, Barbara
  email: imper@mit.edu
  organization: From the Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139 imper@mit.edu
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Keywords oligosaccharyltransferase
protein folding
N-linked glycosylation
substrate specificity
protein translocation
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SSID ssj0000491
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Snippet Site selectivity of protein N-linked glycosylation is dependent on many factors, including accessibility of the modification site, amino acid composition of...
Site selectivity of protein N -linked glycosylation is dependent on many factors, including accessibility of the modification site, amino acid composition of...
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SubjectTerms Bacterial Secretion Systems - genetics
Bacterial Secretion Systems - metabolism
Campylobacter jejuni - genetics
Campylobacter jejuni - metabolism
Escherichia coli - genetics
Escherichia coli - metabolism
Escherichia coli Proteins - genetics
Escherichia coli Proteins - metabolism
Glycobiology and Extracellular Matrices
Glycosylation
Hexosyltransferases - genetics
Hexosyltransferases - metabolism
Lipoproteins - genetics
Lipoproteins - metabolism
Membrane Proteins - genetics
Membrane Proteins - metabolism
Membrane Transport Proteins - genetics
Membrane Transport Proteins - metabolism
Periplasm - genetics
Periplasm - metabolism
Title Bacterial N-Glycosylation Efficiency Is Dependent on the Structural Context of Target Sequons
URI https://www.ncbi.nlm.nih.gov/pubmed/27573243
https://search.proquest.com/docview/1835406119
https://pubmed.ncbi.nlm.nih.gov/PMC5063983
Volume 291
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