Unique observation method of temperature dependence of diatom floating by direct microscope
Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we...
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Published in | Journal of microbiological methods Vol. 172; p. 105901 |
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Main Authors | , , , , , |
Format | Journal Article |
Language | English |
Published |
Netherlands
Elsevier B.V
01.05.2020
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Online Access | Get full text |
ISSN | 0167-7012 1872-8359 1872-8359 |
DOI | 10.1016/j.mimet.2020.105901 |
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Abstract | Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we devised a ‘tumbled’ microscope, a device created by tilting an inverted microscope (CKX53, OLYMPUS) by 90 degrees, due to which allowed observation with a sample stage perpendicular to the ground. When we observed a Petri dish filled with diatom cell suspension, the floating behavior of diatom cells were well visualized.
Cyclotella meneghiniana was isolated and subcultured in bold modified basal freshwater nutrient solution liquid medium (B5282-500ML, Sigma-Aldrich) at 18 °C. Before the microscopic observation, cell suspension was cultured for two weeks after the final subculture. Observation was performed at room temperature, 30 °C, and 40 °C with a temperature sensor in the center of the chamber (inside). Observations were started as soon as the sample was installed.
In a typical image obtained using the tumbled microscope, the diatom cells were found to move from the top to the bottom. In order to analyze floating velocity and trajectory, observation was continued for 35 min at room temperature, 30 °C, and 40 °C. Tracking analysis was carried out using the two-dimensional motion image measurement software Move-tr/2D. The average speed of 100 cells was 7.0 ± 4.3 μm/s at room temperature, 85.6 ± 31.9 μm/s at 30 °C and 470.1 ± 279.8 μm/s at 40 °C. In this study, we devised the unique observation to visualize the temperature dependence of diatom cells.
•Visualize the floating phenomenon of diatom cells using a self-made glass chamber.•The environmental temperature of diatom can be arbitrarily changed using a temperature control heater.•This method is suitable for quantitative analysis of diatom floating phenomena. |
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AbstractList | Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we devised a 'tumbled' microscope, a device created by tilting an inverted microscope (CKX53, OLYMPUS) by 90 degrees, due to which allowed observation with a sample stage perpendicular to the ground. When we observed a Petri dish filled with diatom cell suspension, the floating behavior of diatom cells were well visualized. Cyclotella meneghiniana was isolated and subcultured in bold modified basal freshwater nutrient solution liquid medium (B5282-500ML, Sigma-Aldrich) at 18 °C. Before the microscopic observation, cell suspension was cultured for two weeks after the final subculture. Observation was performed at room temperature, 30 °C, and 40 °C with a temperature sensor in the center of the chamber (inside). Observations were started as soon as the sample was installed. In a typical image obtained using the tumbled microscope, the diatom cells were found to move from the top to the bottom. In order to analyze floating velocity and trajectory, observation was continued for 35 min at room temperature, 30 °C, and 40 °C. Tracking analysis was carried out using the two-dimensional motion image measurement software Move-tr/2D. The average speed of 100 cells was 7.0 ± 4.3 μm/s at room temperature, 85.6 ± 31.9 μm/s at 30 °C and 470.1 ± 279.8 μm/s at 40 °C. In this study, we devised the unique observation to visualize the temperature dependence of diatom cells.Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we devised a 'tumbled' microscope, a device created by tilting an inverted microscope (CKX53, OLYMPUS) by 90 degrees, due to which allowed observation with a sample stage perpendicular to the ground. When we observed a Petri dish filled with diatom cell suspension, the floating behavior of diatom cells were well visualized. Cyclotella meneghiniana was isolated and subcultured in bold modified basal freshwater nutrient solution liquid medium (B5282-500ML, Sigma-Aldrich) at 18 °C. Before the microscopic observation, cell suspension was cultured for two weeks after the final subculture. Observation was performed at room temperature, 30 °C, and 40 °C with a temperature sensor in the center of the chamber (inside). Observations were started as soon as the sample was installed. In a typical image obtained using the tumbled microscope, the diatom cells were found to move from the top to the bottom. In order to analyze floating velocity and trajectory, observation was continued for 35 min at room temperature, 30 °C, and 40 °C. Tracking analysis was carried out using the two-dimensional motion image measurement software Move-tr/2D. The average speed of 100 cells was 7.0 ± 4.3 μm/s at room temperature, 85.6 ± 31.9 μm/s at 30 °C and 470.1 ± 279.8 μm/s at 40 °C. In this study, we devised the unique observation to visualize the temperature dependence of diatom cells. Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we devised a 'tumbled' microscope, a device created by tilting an inverted microscope (CKX53, OLYMPUS) by 90 degrees, due to which allowed observation with a sample stage perpendicular to the ground. When we observed a Petri dish filled with diatom cell suspension, the floating behavior of diatom cells were well visualized. Cyclotella meneghiniana was isolated and subcultured in bold modified basal freshwater nutrient solution liquid medium (B5282-500ML, Sigma-Aldrich) at 18 °C. Before the microscopic observation, cell suspension was cultured for two weeks after the final subculture. Observation was performed at room temperature, 30 °C, and 40 °C with a temperature sensor in the center of the chamber (inside). Observations were started as soon as the sample was installed. In a typical image obtained using the tumbled microscope, the diatom cells were found to move from the top to the bottom. In order to analyze floating velocity and trajectory, observation was continued for 35 min at room temperature, 30 °C, and 40 °C. Tracking analysis was carried out using the two-dimensional motion image measurement software Move-tr/2D. The average speed of 100 cells was 7.0 ± 4.3 μm/s at room temperature, 85.6 ± 31.9 μm/s at 30 °C and 470.1 ± 279.8 μm/s at 40 °C. In this study, we devised the unique observation to visualize the temperature dependence of diatom cells. Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we devised a ‘tumbled’ microscope, a device created by tilting an inverted microscope (CKX53, OLYMPUS) by 90 degrees, due to which allowed observation with a sample stage perpendicular to the ground. When we observed a Petri dish filled with diatom cell suspension, the floating behavior of diatom cells were well visualized.Cyclotella meneghiniana was isolated and subcultured in bold modified basal freshwater nutrient solution liquid medium (B5282-500ML, Sigma-Aldrich) at 18 °C. Before the microscopic observation, cell suspension was cultured for two weeks after the final subculture. Observation was performed at room temperature, 30 °C, and 40 °C with a temperature sensor in the center of the chamber (inside). Observations were started as soon as the sample was installed.In a typical image obtained using the tumbled microscope, the diatom cells were found to move from the top to the bottom. In order to analyze floating velocity and trajectory, observation was continued for 35 min at room temperature, 30 °C, and 40 °C. Tracking analysis was carried out using the two-dimensional motion image measurement software Move-tr/2D. The average speed of 100 cells was 7.0 ± 4.3 μm/s at room temperature, 85.6 ± 31.9 μm/s at 30 °C and 470.1 ± 279.8 μm/s at 40 °C. In this study, we devised the unique observation to visualize the temperature dependence of diatom cells. Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we devised a ‘tumbled’ microscope, a device created by tilting an inverted microscope (CKX53, OLYMPUS) by 90 degrees, due to which allowed observation with a sample stage perpendicular to the ground. When we observed a Petri dish filled with diatom cell suspension, the floating behavior of diatom cells were well visualized. Cyclotella meneghiniana was isolated and subcultured in bold modified basal freshwater nutrient solution liquid medium (B5282-500ML, Sigma-Aldrich) at 18 °C. Before the microscopic observation, cell suspension was cultured for two weeks after the final subculture. Observation was performed at room temperature, 30 °C, and 40 °C with a temperature sensor in the center of the chamber (inside). Observations were started as soon as the sample was installed. In a typical image obtained using the tumbled microscope, the diatom cells were found to move from the top to the bottom. In order to analyze floating velocity and trajectory, observation was continued for 35 min at room temperature, 30 °C, and 40 °C. Tracking analysis was carried out using the two-dimensional motion image measurement software Move-tr/2D. The average speed of 100 cells was 7.0 ± 4.3 μm/s at room temperature, 85.6 ± 31.9 μm/s at 30 °C and 470.1 ± 279.8 μm/s at 40 °C. In this study, we devised the unique observation to visualize the temperature dependence of diatom cells. •Visualize the floating phenomenon of diatom cells using a self-made glass chamber.•The environmental temperature of diatom can be arbitrarily changed using a temperature control heater.•This method is suitable for quantitative analysis of diatom floating phenomena. |
ArticleNumber | 105901 |
Author | Ide, Yuki Miyashiro, Daisuke Umemura, Kazuo Mayama, Shigeki Matsukawa, Yuji Julius, Matthew L. |
Author_xml | – sequence: 1 givenname: Yuki surname: Ide fullname: Ide, Yuki email: lettuceclub2018@gmail.com organization: Tokyo University of Science, 1-3 Kagurazaka, Shinjuku, Tokyo 162-8601, Japan – sequence: 2 givenname: Yuji surname: Matsukawa fullname: Matsukawa, Yuji organization: Tokyo University of Science, 1-3 Kagurazaka, Shinjuku, Tokyo 162-8601, Japan – sequence: 3 givenname: Daisuke surname: Miyashiro fullname: Miyashiro, Daisuke organization: Tokyo University of Science, 1-3 Kagurazaka, Shinjuku, Tokyo 162-8601, Japan – sequence: 4 givenname: Shigeki surname: Mayama fullname: Mayama, Shigeki organization: Tokyo Gakugei University, 4-1-1 Nukui-kita-machi, Koganei, Tokyo 184-8511, Japan – sequence: 5 givenname: Matthew L. surname: Julius fullname: Julius, Matthew L. organization: St. Cloud State University, 720 4th Avenue South St. Cloud, MN 56301-4498, USA – sequence: 6 givenname: Kazuo surname: Umemura fullname: Umemura, Kazuo organization: Tokyo University of Science, 1-3 Kagurazaka, Shinjuku, Tokyo 162-8601, Japan |
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Keywords | Self-made glass chamber Floating diatom Temperature control stage Tumbled microscope |
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Snippet | Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important... |
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SubjectTerms | ambient temperature Bacillariophyceae computer software Floating diatom freshwater microscopy nutrient solutions oxygen photosynthesis Self-made glass chamber Temperature control stage Tumbled microscope |
Title | Unique observation method of temperature dependence of diatom floating by direct microscope |
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