Unique observation method of temperature dependence of diatom floating by direct microscope

Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we...

Full description

Saved in:
Bibliographic Details
Published inJournal of microbiological methods Vol. 172; p. 105901
Main Authors Ide, Yuki, Matsukawa, Yuji, Miyashiro, Daisuke, Mayama, Shigeki, Julius, Matthew L., Umemura, Kazuo
Format Journal Article
LanguageEnglish
Published Netherlands Elsevier B.V 01.05.2020
Subjects
Online AccessGet full text
ISSN0167-7012
1872-8359
1872-8359
DOI10.1016/j.mimet.2020.105901

Cover

Loading…
Abstract Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we devised a ‘tumbled’ microscope, a device created by tilting an inverted microscope (CKX53, OLYMPUS) by 90 degrees, due to which allowed observation with a sample stage perpendicular to the ground. When we observed a Petri dish filled with diatom cell suspension, the floating behavior of diatom cells were well visualized. Cyclotella meneghiniana was isolated and subcultured in bold modified basal freshwater nutrient solution liquid medium (B5282-500ML, Sigma-Aldrich) at 18 °C. Before the microscopic observation, cell suspension was cultured for two weeks after the final subculture. Observation was performed at room temperature, 30 °C, and 40 °C with a temperature sensor in the center of the chamber (inside). Observations were started as soon as the sample was installed. In a typical image obtained using the tumbled microscope, the diatom cells were found to move from the top to the bottom. In order to analyze floating velocity and trajectory, observation was continued for 35 min at room temperature, 30 °C, and 40 °C. Tracking analysis was carried out using the two-dimensional motion image measurement software Move-tr/2D. The average speed of 100 cells was 7.0 ± 4.3 μm/s at room temperature, 85.6 ± 31.9 μm/s at 30 °C and 470.1 ± 279.8 μm/s at 40 °C. In this study, we devised the unique observation to visualize the temperature dependence of diatom cells. •Visualize the floating phenomenon of diatom cells using a self-made glass chamber.•The environmental temperature of diatom can be arbitrarily changed using a temperature control heater.•This method is suitable for quantitative analysis of diatom floating phenomena.
AbstractList Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we devised a 'tumbled' microscope, a device created by tilting an inverted microscope (CKX53, OLYMPUS) by 90 degrees, due to which allowed observation with a sample stage perpendicular to the ground. When we observed a Petri dish filled with diatom cell suspension, the floating behavior of diatom cells were well visualized. Cyclotella meneghiniana was isolated and subcultured in bold modified basal freshwater nutrient solution liquid medium (B5282-500ML, Sigma-Aldrich) at 18 °C. Before the microscopic observation, cell suspension was cultured for two weeks after the final subculture. Observation was performed at room temperature, 30 °C, and 40 °C with a temperature sensor in the center of the chamber (inside). Observations were started as soon as the sample was installed. In a typical image obtained using the tumbled microscope, the diatom cells were found to move from the top to the bottom. In order to analyze floating velocity and trajectory, observation was continued for 35 min at room temperature, 30 °C, and 40 °C. Tracking analysis was carried out using the two-dimensional motion image measurement software Move-tr/2D. The average speed of 100 cells was 7.0 ± 4.3 μm/s at room temperature, 85.6 ± 31.9 μm/s at 30 °C and 470.1 ± 279.8 μm/s at 40 °C. In this study, we devised the unique observation to visualize the temperature dependence of diatom cells.Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we devised a 'tumbled' microscope, a device created by tilting an inverted microscope (CKX53, OLYMPUS) by 90 degrees, due to which allowed observation with a sample stage perpendicular to the ground. When we observed a Petri dish filled with diatom cell suspension, the floating behavior of diatom cells were well visualized. Cyclotella meneghiniana was isolated and subcultured in bold modified basal freshwater nutrient solution liquid medium (B5282-500ML, Sigma-Aldrich) at 18 °C. Before the microscopic observation, cell suspension was cultured for two weeks after the final subculture. Observation was performed at room temperature, 30 °C, and 40 °C with a temperature sensor in the center of the chamber (inside). Observations were started as soon as the sample was installed. In a typical image obtained using the tumbled microscope, the diatom cells were found to move from the top to the bottom. In order to analyze floating velocity and trajectory, observation was continued for 35 min at room temperature, 30 °C, and 40 °C. Tracking analysis was carried out using the two-dimensional motion image measurement software Move-tr/2D. The average speed of 100 cells was 7.0 ± 4.3 μm/s at room temperature, 85.6 ± 31.9 μm/s at 30 °C and 470.1 ± 279.8 μm/s at 40 °C. In this study, we devised the unique observation to visualize the temperature dependence of diatom cells.
Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we devised a 'tumbled' microscope, a device created by tilting an inverted microscope (CKX53, OLYMPUS) by 90 degrees, due to which allowed observation with a sample stage perpendicular to the ground. When we observed a Petri dish filled with diatom cell suspension, the floating behavior of diatom cells were well visualized. Cyclotella meneghiniana was isolated and subcultured in bold modified basal freshwater nutrient solution liquid medium (B5282-500ML, Sigma-Aldrich) at 18 °C. Before the microscopic observation, cell suspension was cultured for two weeks after the final subculture. Observation was performed at room temperature, 30 °C, and 40 °C with a temperature sensor in the center of the chamber (inside). Observations were started as soon as the sample was installed. In a typical image obtained using the tumbled microscope, the diatom cells were found to move from the top to the bottom. In order to analyze floating velocity and trajectory, observation was continued for 35 min at room temperature, 30 °C, and 40 °C. Tracking analysis was carried out using the two-dimensional motion image measurement software Move-tr/2D. The average speed of 100 cells was 7.0 ± 4.3 μm/s at room temperature, 85.6 ± 31.9 μm/s at 30 °C and 470.1 ± 279.8 μm/s at 40 °C. In this study, we devised the unique observation to visualize the temperature dependence of diatom cells.
Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we devised a ‘tumbled’ microscope, a device created by tilting an inverted microscope (CKX53, OLYMPUS) by 90 degrees, due to which allowed observation with a sample stage perpendicular to the ground. When we observed a Petri dish filled with diatom cell suspension, the floating behavior of diatom cells were well visualized.Cyclotella meneghiniana was isolated and subcultured in bold modified basal freshwater nutrient solution liquid medium (B5282-500ML, Sigma-Aldrich) at 18 °C. Before the microscopic observation, cell suspension was cultured for two weeks after the final subculture. Observation was performed at room temperature, 30 °C, and 40 °C with a temperature sensor in the center of the chamber (inside). Observations were started as soon as the sample was installed.In a typical image obtained using the tumbled microscope, the diatom cells were found to move from the top to the bottom. In order to analyze floating velocity and trajectory, observation was continued for 35 min at room temperature, 30 °C, and 40 °C. Tracking analysis was carried out using the two-dimensional motion image measurement software Move-tr/2D. The average speed of 100 cells was 7.0 ± 4.3 μm/s at room temperature, 85.6 ± 31.9 μm/s at 30 °C and 470.1 ± 279.8 μm/s at 40 °C. In this study, we devised the unique observation to visualize the temperature dependence of diatom cells.
Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important research subject. Efficiency of photosynthesis of diatom cells may be heavily affected by their floating behavior. In our previous research, we devised a ‘tumbled’ microscope, a device created by tilting an inverted microscope (CKX53, OLYMPUS) by 90 degrees, due to which allowed observation with a sample stage perpendicular to the ground. When we observed a Petri dish filled with diatom cell suspension, the floating behavior of diatom cells were well visualized. Cyclotella meneghiniana was isolated and subcultured in bold modified basal freshwater nutrient solution liquid medium (B5282-500ML, Sigma-Aldrich) at 18 °C. Before the microscopic observation, cell suspension was cultured for two weeks after the final subculture. Observation was performed at room temperature, 30 °C, and 40 °C with a temperature sensor in the center of the chamber (inside). Observations were started as soon as the sample was installed. In a typical image obtained using the tumbled microscope, the diatom cells were found to move from the top to the bottom. In order to analyze floating velocity and trajectory, observation was continued for 35 min at room temperature, 30 °C, and 40 °C. Tracking analysis was carried out using the two-dimensional motion image measurement software Move-tr/2D. The average speed of 100 cells was 7.0 ± 4.3 μm/s at room temperature, 85.6 ± 31.9 μm/s at 30 °C and 470.1 ± 279.8 μm/s at 40 °C. In this study, we devised the unique observation to visualize the temperature dependence of diatom cells. •Visualize the floating phenomenon of diatom cells using a self-made glass chamber.•The environmental temperature of diatom can be arbitrarily changed using a temperature control heater.•This method is suitable for quantitative analysis of diatom floating phenomena.
ArticleNumber 105901
Author Ide, Yuki
Miyashiro, Daisuke
Umemura, Kazuo
Mayama, Shigeki
Matsukawa, Yuji
Julius, Matthew L.
Author_xml – sequence: 1
  givenname: Yuki
  surname: Ide
  fullname: Ide, Yuki
  email: lettuceclub2018@gmail.com
  organization: Tokyo University of Science, 1-3 Kagurazaka, Shinjuku, Tokyo 162-8601, Japan
– sequence: 2
  givenname: Yuji
  surname: Matsukawa
  fullname: Matsukawa, Yuji
  organization: Tokyo University of Science, 1-3 Kagurazaka, Shinjuku, Tokyo 162-8601, Japan
– sequence: 3
  givenname: Daisuke
  surname: Miyashiro
  fullname: Miyashiro, Daisuke
  organization: Tokyo University of Science, 1-3 Kagurazaka, Shinjuku, Tokyo 162-8601, Japan
– sequence: 4
  givenname: Shigeki
  surname: Mayama
  fullname: Mayama, Shigeki
  organization: Tokyo Gakugei University, 4-1-1 Nukui-kita-machi, Koganei, Tokyo 184-8511, Japan
– sequence: 5
  givenname: Matthew L.
  surname: Julius
  fullname: Julius, Matthew L.
  organization: St. Cloud State University, 720 4th Avenue South St. Cloud, MN 56301-4498, USA
– sequence: 6
  givenname: Kazuo
  surname: Umemura
  fullname: Umemura, Kazuo
  organization: Tokyo University of Science, 1-3 Kagurazaka, Shinjuku, Tokyo 162-8601, Japan
BackLink https://www.ncbi.nlm.nih.gov/pubmed/32199876$$D View this record in MEDLINE/PubMed
BookMark eNqFkUtP7SAUhYnR6PHxC25y06GTHgu0BQYOjPGVmDjRkQNCYePlpC0VOCb-e6nVyR0oDEg261vJXusQ7Y5-BIT-4GqNK9yebdaDGyCtSUXmSSMqvINWmDNSctqIXbTKKlayCpMDdBjjpqpwQ2u-jw4owUJw1q7Q89PoXrdQ-C5CeFPJ-bHIpv-8KbwtEgwTBJW2AQoDE4wGRg3zj3Eq-aGwvc_M-FJ073kUQKdicDr4qP0Ex2jPqj7Cydd7hJ6urx4vb8v7h5u7y4v7UtcNTyVXDNuuVtYq22rWKCq0xqI2jFhsOoE5aMyahnJhuqZrteUGDBWqtZpY0tEjdLr4TsHnXWKSg4sa-l6N4LdRkpqKfOfzq5RyzOuWsTpL_35Jt90ARk7BDSq8y-_sskAsgnnfGMBK7dJngiko10tcybknuZGfPcm5J7n0lFn6H_tt_zN1vlCQ03xzEGTUbm5kiV4a737kPwDTpK6w
CitedBy_id crossref_primary_10_1017_S1431927621012150
crossref_primary_10_1016_j_exger_2024_112428
crossref_primary_10_1016_j_micron_2021_103178
crossref_primary_10_1016_j_colsurfa_2024_134888
crossref_primary_10_1016_j_jphotochem_2024_115550
crossref_primary_10_1017_S1431927622012508
Cites_doi 10.1002/(SICI)1521-186X(1999)20:2<94::AID-BEM3>3.0.CO;2-Q
10.1016/S0065-2504(08)60192-0
10.3354/ame01187
10.1016/j.ecolind.2017.07.058
10.1016/j.mimet.2019.105804
10.1016/S0967-0637(02)00146-2
10.1080/00071617900650111
10.1007/BF01254629
10.1016/j.envexpbot.2018.08.031
10.1016/S1001-0742(11)60960-1
10.5194/bg-6-85-2009
10.1038/ncomms9136
10.4319/lo.2012.57.2.0541
10.1111/jpy.12750
10.4319/lo.1996.41.7.1514
10.1111/pre.12066
10.1016/0014-4827(72)90416-8
10.4319/lom.2008.6.466
10.1038/27174
10.3354/meps054109
10.3989/scimar.04480.06E
10.1016/j.mimet.2013.01.006
10.1007/s00249-015-1006-0
10.1680/geot.2003.53.7.619
10.1111/j.1529-8817.2006.00194.x
10.4319/lo.2009.54.5.1723
10.1146/annurev-marine-120308-081051
10.1029/95GB01070
10.1038/nature08057
10.1080/0269249X.2004.9705870
10.1093/plankt/25.4.365
10.4319/lo.2008.53.2.0469
ContentType Journal Article
Copyright 2020 Elsevier B.V.
Copyright © 2020 Elsevier B.V. All rights reserved.
Copyright_xml – notice: 2020 Elsevier B.V.
– notice: Copyright © 2020 Elsevier B.V. All rights reserved.
DBID AAYXX
CITATION
NPM
7X8
7S9
L.6
DOI 10.1016/j.mimet.2020.105901
DatabaseName CrossRef
PubMed
MEDLINE - Academic
AGRICOLA
AGRICOLA - Academic
DatabaseTitle CrossRef
PubMed
MEDLINE - Academic
AGRICOLA
AGRICOLA - Academic
DatabaseTitleList MEDLINE - Academic
PubMed
AGRICOLA

Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
DeliveryMethod fulltext_linktorsrc
Discipline Biology
EISSN 1872-8359
ExternalDocumentID 32199876
10_1016_j_mimet_2020_105901
S0167701220301081
Genre Journal Article
GroupedDBID ---
--K
--M
-~X
.1-
.~1
0R~
1B1
1P~
1RT
1~.
1~5
29L
3O-
4.4
457
4G.
53G
5GY
5VS
7-5
71M
8P~
9JM
AAAJQ
AABNK
AAEDT
AAEDW
AAHBH
AAIKJ
AAKOC
AALRI
AAOAW
AAQFI
AAQXK
AARKO
AATTM
AAXKI
AAXUO
AAYWO
ABDPE
ABFNM
ABFRF
ABGSF
ABJNI
ABMAC
ABUDA
ABWVN
ABXDB
ACDAQ
ACGFO
ACGFS
ACIUM
ACRLP
ACRPL
ACVFH
ADBBV
ADCNI
ADEZE
ADMUD
ADNMO
ADUVX
AEBSH
AEFWE
AEHWI
AEIPS
AEKER
AENEX
AEUPX
AFCTW
AFJKZ
AFPUW
AFTJW
AFXIZ
AGCQF
AGEKW
AGHFR
AGQPQ
AGRDE
AGRNS
AGUBO
AGYEJ
AHHHB
AIEXJ
AIGII
AIIUN
AIKHN
AITUG
AJUYK
AKBMS
AKRWK
AKYEP
ALMA_UNASSIGNED_HOLDINGS
AMRAJ
ANKPU
APXCP
ASPBG
AVWKF
AXJTR
AZFZN
BKOJK
BLXMC
BNPGV
CJTIS
CNWQP
CS3
DU5
EBS
EFJIC
EJD
EO8
EO9
EP2
EP3
F5P
FDB
FEDTE
FGOYB
FIRID
FNPLU
FYGXN
G-2
G-Q
GBLVA
HMG
HVGLF
HZ~
IHE
J1W
KOM
LUGTX
M41
MO0
N9A
O-L
O9-
OAUVE
OZT
P-8
P-9
P2P
PC.
Q38
R2-
RIG
ROL
RPZ
SCC
SDF
SDG
SDP
SES
SEW
SIN
SPCBC
SSH
SSI
SSU
SSZ
T5K
WH7
WUQ
Y6R
Z5R
~02
~G-
~KM
AAYXX
CITATION
AACTN
AFKWA
AJOXV
AMFUW
NPM
7X8
7S9
L.6
ID FETCH-LOGICAL-c458t-8a71fb4affaf6c75a39cc194d72f1db918ec1755389db5b6cf8ded39a6fc2f2b3
IEDL.DBID .~1
ISSN 0167-7012
1872-8359
IngestDate Fri Jul 11 10:49:19 EDT 2025
Thu Jul 10 19:05:06 EDT 2025
Wed Feb 19 02:30:45 EST 2025
Tue Jul 01 04:51:19 EDT 2025
Thu Apr 24 23:07:33 EDT 2025
Sat Jun 07 17:01:56 EDT 2025
IsPeerReviewed true
IsScholarly true
Keywords Self-made glass chamber
Floating diatom
Temperature control stage
Tumbled microscope
Language English
License Copyright © 2020 Elsevier B.V. All rights reserved.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c458t-8a71fb4affaf6c75a39cc194d72f1db918ec1755389db5b6cf8ded39a6fc2f2b3
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
PMID 32199876
PQID 2381846774
PQPubID 23479
ParticipantIDs proquest_miscellaneous_2439393333
proquest_miscellaneous_2381846774
pubmed_primary_32199876
crossref_citationtrail_10_1016_j_mimet_2020_105901
crossref_primary_10_1016_j_mimet_2020_105901
elsevier_sciencedirect_doi_10_1016_j_mimet_2020_105901
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate May 2020
2020-05-00
2020-May
20200501
PublicationDateYYYYMMDD 2020-05-01
PublicationDate_xml – month: 05
  year: 2020
  text: May 2020
PublicationDecade 2020
PublicationPlace Netherlands
PublicationPlace_xml – name: Netherlands
PublicationTitle Journal of microbiological methods
PublicationTitleAlternate J Microbiol Methods
PublicationYear 2020
Publisher Elsevier B.V
Publisher_xml – name: Elsevier B.V
References Claquin, Probert, Lefebvre, Veron (bb0035) 2008; 51
Riebesell (bb0125) 1989; 54
Consalvey, Paterson, Underwood (bb0045) 2004; 19
Shatwell, Nicklisch, Kohler (bb0135) 2012; 57
Moore, Villareal (bb0105) 1996; 41
Umemura, Haneda, Tanabe, Suzuki, Kumashiro, Itoga, Okano, Mayama (bb0150) 2013; 92
Apoya-Horton, Yin, Underwood, Gretz (bb0010) 2006; 42
Cartaxana, Serodio (bb0030) 2008; 6
Umemura, Miyabayashi, Taira, Suzuki, Kumashiro, Okano, Mayama (bb0155) 2015; 44
Underwood, Kromkamp (bb0160) 1999; 29
Winfried Lampert (bb0170) 2007
Abelmann, Gersonde, Knorr, Zhang, Chapligin, Maier, Esper, Friedrichsen, Lohmann, Meyer, Tiedemann (bb0005) 2015; 6
Asper, Smith (bb0020) 2003; 50
Gao, Xu, Shi, Wu (bb0075) 2018; 156
Feijao, Gameiro, Franzitta, Duarte, Cacador, Cabrita, Matos (bb0065) 2018; 95
Gasol, Cardelus, Moran, Balague, Forn, Marrase, Massana, Pedros-Alio, Sala, Simo, Vaque, Estrada (bb0080) 2016; 80
Kvernvik, Hoppe, Lawrenz, Prasil, Greenacre, Wiktor, Leu (bb0090) 2018; 54
Fischer, Karakas (bb0070) 2009; 6
Trampe, Hansen, Kuhl (bb0145) 2015; 30
Armbrust (bb0015) 2009; 459
Nelson, Treguer, Brzezinski, Leynaert, Queguiner (bb0110) 1995; 9
Bowler, Vardi, Allen (bb0025) 2010; 2
Shoumura, Hamano, Hanada, Mayama, Umemura (bb0140) 2020; 168
Matsukawa, Ide, Umemura (bb0095) 2019; 12
Clarkson, Davies, Dixey (bb0040) 1999; 20
Drum, Hopkins (bb0055) 1966; 62
Iwasa, Shimizu (bb0085) 1972; 74
Edgar (bb0060) 1979; 14
Xiao, Li, Lam, Wang (bb0175) 2012; 24
White, Take, Bolton (bb0165) 2003; 53
Rosen, Cunningham, Vonk, Karlsson (bb0130) 2009; 54
Matsumoto, Mayama, Nemoto, Fukuda, Muto, Yoshino, Matsunaga, Tanaka (bb0100) 2014; 62
De La Rocha, Brzezinski, DeNiro, Shemesh (bb0050) 1998; 395
Peperzak, Colijn, Koeman, Gieskes, Joordens (bb0115) 2003; 25
Ploug, Iversen, Koski, Buitenhuis (bb0120) 2008; 53
Abelmann (10.1016/j.mimet.2020.105901_bb0005) 2015; 6
Gasol (10.1016/j.mimet.2020.105901_bb0080) 2016; 80
Edgar (10.1016/j.mimet.2020.105901_bb0060) 1979; 14
Matsumoto (10.1016/j.mimet.2020.105901_bb0100) 2014; 62
Bowler (10.1016/j.mimet.2020.105901_bb0025) 2010; 2
Feijao (10.1016/j.mimet.2020.105901_bb0065) 2018; 95
Iwasa (10.1016/j.mimet.2020.105901_bb0085) 1972; 74
Umemura (10.1016/j.mimet.2020.105901_bb0150) 2013; 92
Ploug (10.1016/j.mimet.2020.105901_bb0120) 2008; 53
Claquin (10.1016/j.mimet.2020.105901_bb0035) 2008; 51
Peperzak (10.1016/j.mimet.2020.105901_bb0115) 2003; 25
White (10.1016/j.mimet.2020.105901_bb0165) 2003; 53
Consalvey (10.1016/j.mimet.2020.105901_bb0045) 2004; 19
Matsukawa (10.1016/j.mimet.2020.105901_bb0095) 2019; 12
Trampe (10.1016/j.mimet.2020.105901_bb0145) 2015; 30
Apoya-Horton (10.1016/j.mimet.2020.105901_bb0010) 2006; 42
Underwood (10.1016/j.mimet.2020.105901_bb0160) 1999; 29
Kvernvik (10.1016/j.mimet.2020.105901_bb0090) 2018; 54
Xiao (10.1016/j.mimet.2020.105901_bb0175) 2012; 24
De La Rocha (10.1016/j.mimet.2020.105901_bb0050) 1998; 395
Gao (10.1016/j.mimet.2020.105901_bb0075) 2018; 156
Clarkson (10.1016/j.mimet.2020.105901_bb0040) 1999; 20
Umemura (10.1016/j.mimet.2020.105901_bb0155) 2015; 44
Winfried Lampert (10.1016/j.mimet.2020.105901_bb0170) 2007
Armbrust (10.1016/j.mimet.2020.105901_bb0015) 2009; 459
Fischer (10.1016/j.mimet.2020.105901_bb0070) 2009; 6
Cartaxana (10.1016/j.mimet.2020.105901_bb0030) 2008; 6
Drum (10.1016/j.mimet.2020.105901_bb0055) 1966; 62
Rosen (10.1016/j.mimet.2020.105901_bb0130) 2009; 54
Shatwell (10.1016/j.mimet.2020.105901_bb0135) 2012; 57
Riebesell (10.1016/j.mimet.2020.105901_bb0125) 1989; 54
Shoumura (10.1016/j.mimet.2020.105901_bb0140) 2020; 168
Moore (10.1016/j.mimet.2020.105901_bb0105) 1996; 41
Asper (10.1016/j.mimet.2020.105901_bb0020) 2003; 50
Nelson (10.1016/j.mimet.2020.105901_bb0110) 1995; 9
References_xml – volume: 80
  start-page: 63
  year: 2016
  end-page: 77
  ident: bb0080
  article-title: Seasonal patterns in phytoplankton photosynthetic parameters and primary production at a coastal NW Mediterranean site
  publication-title: Sci. Mar.
– volume: 62
  year: 1966
  ident: bb0055
  article-title: Diatom locomotion - an explanation
  publication-title: Protoplasma
– volume: 29
  start-page: 93
  year: 1999
  end-page: 153
  ident: bb0160
  article-title: Primary production by phytoplankton and microphytobenthos in estuaries
  publication-title: Advances in Ecological Research, Vol 29: Estuaries
– volume: 14
  start-page: 83
  year: 1979
  end-page: 101
  ident: bb0060
  article-title: Diatom locomotion - computer-assisted analysis of cine film
  publication-title: Br. Phycol. J.
– volume: 459
  start-page: 185
  year: 2009
  end-page: 192
  ident: bb0015
  article-title: The life of diatoms in the world's oceans
  publication-title: Nature
– volume: 62
  start-page: 257
  year: 2014
  end-page: 268
  ident: bb0100
  article-title: Morphological and molecular phylogenetic analysis of the high triglyceride-producing marine diatom, Fistulifera solaris sp nov (Bacillariophyceae)
  publication-title: Phycol. Res.
– volume: 53
  start-page: 469
  year: 2008
  end-page: 476
  ident: bb0120
  article-title: Production, oxygen respiration rates, and sinking velocity of copepod fecal pellets: direct measurements of ballasting by opal and calcite
  publication-title: Limnol. Oceanogr.
– volume: 6
  start-page: 12
  year: 2015
  ident: bb0005
  article-title: The seasonal sea-ice zone in the glacial Southern Ocean as a carbon sink
  publication-title: Nat. Commun.
– volume: 2
  start-page: 333
  year: 2010
  end-page: 365
  ident: bb0025
  article-title: Oceanographic and biogeochemical insights from diatom genomes
  publication-title: Annu. Rev. Mar. Sci.
– volume: 168
  year: 2020
  ident: bb0140
  article-title: Single cell analysis of sinking diatoms studied using a homemade ‘tumbled’ optical microscope system
  publication-title: J. Microbiol. Methods
– volume: 12
  year: 2019
  ident: bb0095
  article-title: Fabrication of microscope stage for vertical observation with temperature control function
  publication-title: J. Vis. Exp.
– volume: 95
  start-page: 1026
  year: 2018
  end-page: 1037
  ident: bb0065
  article-title: Heat wave impacts on the model diatom Phaeodactylum tricornutum: searching for photochemical and fatty acid biomarkers of thermal stress
  publication-title: Ecol. Indic.
– volume: 6
  start-page: 466
  year: 2008
  end-page: 476
  ident: bb0030
  article-title: Inhibiting diatom motility: a new tool for the study of the photophysiology of intertidal microphytobenthic biofilms
  publication-title: Limnol. Oceanogr. Meth.
– volume: 30
  start-page: 103
  year: 2015
  end-page: 119
  ident: bb0145
  article-title: A comparison of photosynthesis measurements by O-2 evolution, C-14 assimilation, and variable chlorophyll fluorescence during light acclimatization of the diatom Coscinodiscus granii
  publication-title: Algae
– volume: 20
  start-page: 94
  year: 1999
  end-page: 100
  ident: bb0040
  article-title: Diatom motility and low frequency electromagnetic fields - a new technique in the search for independent replication of results
  publication-title: Bioelectromagnetics
– volume: 44
  start-page: 113
  year: 2015
  end-page: 119
  ident: bb0155
  article-title: Use of a microchamber for analysis of thermal variation of the gliding phenomenon of single Navicula pavillardii cells
  publication-title: Eur. Biophys. J. Biophys. Lett.
– volume: 6
  start-page: 85
  year: 2009
  end-page: 102
  ident: bb0070
  article-title: Sinking rates and ballast composition of particles in the Atlantic Ocean: implications for the organic carbon fluxes to the deep ocean
  publication-title: Biogeosciences
– volume: 54
  start-page: 109
  year: 1989
  end-page: 119
  ident: bb0125
  article-title: Comparison of sinking and sedimentation-rate measurements in a diatom winter spring bloom
  publication-title: Mar. Ecol. Prog. Ser.
– volume: 53
  start-page: 619
  year: 2003
  end-page: 631
  ident: bb0165
  article-title: Soil deformation measurement using particle image velocimetry (PIV) and photogrammetry
  publication-title: Geotechnique.
– volume: 19
  start-page: 181
  year: 2004
  end-page: 202
  ident: bb0045
  article-title: The ups and downs of life in a benthic biofilm: migration of benthic diatoms
  publication-title: Diatom Res.
– volume: 54
  start-page: 461
  year: 2018
  end-page: 470
  ident: bb0090
  article-title: Fast reactivation of photosynthesis in arctic phytoplankton during the polar night(1)
  publication-title: J. Phycol.
– volume: 41
  start-page: 1514
  year: 1996
  end-page: 1520
  ident: bb0105
  article-title: Size-ascent rate relationships in positively buoyant marine diatoms
  publication-title: Limnol. Oceanogr.
– volume: 54
  start-page: 1723
  year: 2009
  end-page: 1732
  ident: bb0130
  article-title: Effects of climate on organic carbon and the ratio of planktonic to benthic primary producers in a subarctic lake during the past 45 years
  publication-title: Limnol. Oceanogr.
– volume: 395
  start-page: 680
  year: 1998
  end-page: 683
  ident: bb0050
  article-title: Silicon-isotope composition of diatoms as an indicator of past oceanic change
  publication-title: Nature
– volume: 92
  start-page: 349
  year: 2013
  end-page: 354
  ident: bb0150
  article-title: Semi-circular microgrooves to observe active movements of individual Navicula pavillardii cells
  publication-title: J. Microbiol. Methods
– volume: 156
  start-page: 96
  year: 2018
  end-page: 105
  ident: bb0075
  article-title: Increased CO2 exacerbates the stress of ultraviolet radiation on photosystem II function in the diatom Thalassiosira weissflogii
  publication-title: Environ. Exp. Bot.
– start-page: 47
  year: 2007
  ident: bb0170
  article-title: Limnoecology the Ecology of Lakes and Streams
– volume: 51
  start-page: 1
  year: 2008
  end-page: 11
  ident: bb0035
  article-title: Effects of temperature on photosynthetic parameters and TEP production in eight species of marine microalgae
  publication-title: Aquat. Microb. Ecol.
– volume: 9
  start-page: 359
  year: 1995
  end-page: 372
  ident: bb0110
  article-title: Production and dissolution of biogenic silica in the ocean - revised global estimates, comparison with regional data and relationship to biogenic sedimentation
  publication-title: Glob. Biogeochem. Cycle
– volume: 25
  start-page: 365
  year: 2003
  end-page: 383
  ident: bb0115
  article-title: Phytoplankton sinking rates in the Rhine region of freshwater influence
  publication-title: J. Plankton Res.
– volume: 24
  start-page: 1157
  year: 2012
  end-page: 1164
  ident: bb0175
  article-title: Investigation of the hydrodynamic behavior of diatom aggregates using particle image velocimetry
  publication-title: J. Environ. Sci.
– volume: 50
  start-page: 131
  year: 2003
  end-page: 150
  ident: bb0020
  article-title: Abundance, distribution and sinking rates of aggregates in the Ross Sea, Antarctica
  publication-title: Deep-Sea Res. Part I Oceanogr. Res. Pap.
– volume: 42
  start-page: 379
  year: 2006
  end-page: 390
  ident: bb0010
  article-title: Movement modalities and responses to environmental changes of the mudflat diatom Cylindrotheca closterium (Bacillariophyceae)
  publication-title: J. Phycol.
– volume: 74
  year: 1972
  ident: bb0085
  article-title: Motility of diatom, phaeodactylum-tricornutum
  publication-title: Exp. Cell Res.
– volume: 57
  start-page: 541
  year: 2012
  end-page: 553
  ident: bb0135
  article-title: Temperature and photoperiod effects on phytoplankton growing under simulated mixed layer light fluctuations
  publication-title: Limnol. Oceanogr.
– volume: 20
  start-page: 94
  year: 1999
  ident: 10.1016/j.mimet.2020.105901_bb0040
  article-title: Diatom motility and low frequency electromagnetic fields - a new technique in the search for independent replication of results
  publication-title: Bioelectromagnetics
  doi: 10.1002/(SICI)1521-186X(1999)20:2<94::AID-BEM3>3.0.CO;2-Q
– volume: 29
  start-page: 93
  year: 1999
  ident: 10.1016/j.mimet.2020.105901_bb0160
  article-title: Primary production by phytoplankton and microphytobenthos in estuaries
  doi: 10.1016/S0065-2504(08)60192-0
– volume: 51
  start-page: 1
  year: 2008
  ident: 10.1016/j.mimet.2020.105901_bb0035
  article-title: Effects of temperature on photosynthetic parameters and TEP production in eight species of marine microalgae
  publication-title: Aquat. Microb. Ecol.
  doi: 10.3354/ame01187
– volume: 95
  start-page: 1026
  year: 2018
  ident: 10.1016/j.mimet.2020.105901_bb0065
  article-title: Heat wave impacts on the model diatom Phaeodactylum tricornutum: searching for photochemical and fatty acid biomarkers of thermal stress
  publication-title: Ecol. Indic.
  doi: 10.1016/j.ecolind.2017.07.058
– volume: 168
  year: 2020
  ident: 10.1016/j.mimet.2020.105901_bb0140
  article-title: Single cell analysis of sinking diatoms studied using a homemade ‘tumbled’ optical microscope system
  publication-title: J. Microbiol. Methods
  doi: 10.1016/j.mimet.2019.105804
– volume: 50
  start-page: 131
  year: 2003
  ident: 10.1016/j.mimet.2020.105901_bb0020
  article-title: Abundance, distribution and sinking rates of aggregates in the Ross Sea, Antarctica
  publication-title: Deep-Sea Res. Part I Oceanogr. Res. Pap.
  doi: 10.1016/S0967-0637(02)00146-2
– volume: 14
  start-page: 83
  year: 1979
  ident: 10.1016/j.mimet.2020.105901_bb0060
  article-title: Diatom locomotion - computer-assisted analysis of cine film
  publication-title: Br. Phycol. J.
  doi: 10.1080/00071617900650111
– volume: 62
  year: 1966
  ident: 10.1016/j.mimet.2020.105901_bb0055
  article-title: Diatom locomotion - an explanation
  publication-title: Protoplasma
  doi: 10.1007/BF01254629
– volume: 156
  start-page: 96
  year: 2018
  ident: 10.1016/j.mimet.2020.105901_bb0075
  article-title: Increased CO2 exacerbates the stress of ultraviolet radiation on photosystem II function in the diatom Thalassiosira weissflogii
  publication-title: Environ. Exp. Bot.
  doi: 10.1016/j.envexpbot.2018.08.031
– volume: 24
  start-page: 1157
  year: 2012
  ident: 10.1016/j.mimet.2020.105901_bb0175
  article-title: Investigation of the hydrodynamic behavior of diatom aggregates using particle image velocimetry
  publication-title: J. Environ. Sci.
  doi: 10.1016/S1001-0742(11)60960-1
– volume: 6
  start-page: 85
  year: 2009
  ident: 10.1016/j.mimet.2020.105901_bb0070
  article-title: Sinking rates and ballast composition of particles in the Atlantic Ocean: implications for the organic carbon fluxes to the deep ocean
  publication-title: Biogeosciences
  doi: 10.5194/bg-6-85-2009
– start-page: 47
  year: 2007
  ident: 10.1016/j.mimet.2020.105901_bb0170
– volume: 6
  start-page: 12
  year: 2015
  ident: 10.1016/j.mimet.2020.105901_bb0005
  article-title: The seasonal sea-ice zone in the glacial Southern Ocean as a carbon sink
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms9136
– volume: 57
  start-page: 541
  year: 2012
  ident: 10.1016/j.mimet.2020.105901_bb0135
  article-title: Temperature and photoperiod effects on phytoplankton growing under simulated mixed layer light fluctuations
  publication-title: Limnol. Oceanogr.
  doi: 10.4319/lo.2012.57.2.0541
– volume: 54
  start-page: 461
  year: 2018
  ident: 10.1016/j.mimet.2020.105901_bb0090
  article-title: Fast reactivation of photosynthesis in arctic phytoplankton during the polar night(1)
  publication-title: J. Phycol.
  doi: 10.1111/jpy.12750
– volume: 41
  start-page: 1514
  year: 1996
  ident: 10.1016/j.mimet.2020.105901_bb0105
  article-title: Size-ascent rate relationships in positively buoyant marine diatoms
  publication-title: Limnol. Oceanogr.
  doi: 10.4319/lo.1996.41.7.1514
– volume: 62
  start-page: 257
  year: 2014
  ident: 10.1016/j.mimet.2020.105901_bb0100
  article-title: Morphological and molecular phylogenetic analysis of the high triglyceride-producing marine diatom, Fistulifera solaris sp nov (Bacillariophyceae)
  publication-title: Phycol. Res.
  doi: 10.1111/pre.12066
– volume: 74
  year: 1972
  ident: 10.1016/j.mimet.2020.105901_bb0085
  article-title: Motility of diatom, phaeodactylum-tricornutum
  publication-title: Exp. Cell Res.
  doi: 10.1016/0014-4827(72)90416-8
– volume: 6
  start-page: 466
  year: 2008
  ident: 10.1016/j.mimet.2020.105901_bb0030
  article-title: Inhibiting diatom motility: a new tool for the study of the photophysiology of intertidal microphytobenthic biofilms
  publication-title: Limnol. Oceanogr. Meth.
  doi: 10.4319/lom.2008.6.466
– volume: 395
  start-page: 680
  year: 1998
  ident: 10.1016/j.mimet.2020.105901_bb0050
  article-title: Silicon-isotope composition of diatoms as an indicator of past oceanic change
  publication-title: Nature
  doi: 10.1038/27174
– volume: 54
  start-page: 109
  year: 1989
  ident: 10.1016/j.mimet.2020.105901_bb0125
  article-title: Comparison of sinking and sedimentation-rate measurements in a diatom winter spring bloom
  publication-title: Mar. Ecol. Prog. Ser.
  doi: 10.3354/meps054109
– volume: 80
  start-page: 63
  year: 2016
  ident: 10.1016/j.mimet.2020.105901_bb0080
  article-title: Seasonal patterns in phytoplankton photosynthetic parameters and primary production at a coastal NW Mediterranean site
  publication-title: Sci. Mar.
  doi: 10.3989/scimar.04480.06E
– volume: 92
  start-page: 349
  year: 2013
  ident: 10.1016/j.mimet.2020.105901_bb0150
  article-title: Semi-circular microgrooves to observe active movements of individual Navicula pavillardii cells
  publication-title: J. Microbiol. Methods
  doi: 10.1016/j.mimet.2013.01.006
– volume: 44
  start-page: 113
  year: 2015
  ident: 10.1016/j.mimet.2020.105901_bb0155
  article-title: Use of a microchamber for analysis of thermal variation of the gliding phenomenon of single Navicula pavillardii cells
  publication-title: Eur. Biophys. J. Biophys. Lett.
  doi: 10.1007/s00249-015-1006-0
– volume: 30
  start-page: 103
  year: 2015
  ident: 10.1016/j.mimet.2020.105901_bb0145
  article-title: A comparison of photosynthesis measurements by O-2 evolution, C-14 assimilation, and variable chlorophyll fluorescence during light acclimatization of the diatom Coscinodiscus granii
  publication-title: Algae
– volume: 53
  start-page: 619
  year: 2003
  ident: 10.1016/j.mimet.2020.105901_bb0165
  article-title: Soil deformation measurement using particle image velocimetry (PIV) and photogrammetry
  publication-title: Geotechnique.
  doi: 10.1680/geot.2003.53.7.619
– volume: 42
  start-page: 379
  year: 2006
  ident: 10.1016/j.mimet.2020.105901_bb0010
  article-title: Movement modalities and responses to environmental changes of the mudflat diatom Cylindrotheca closterium (Bacillariophyceae)
  publication-title: J. Phycol.
  doi: 10.1111/j.1529-8817.2006.00194.x
– volume: 54
  start-page: 1723
  year: 2009
  ident: 10.1016/j.mimet.2020.105901_bb0130
  article-title: Effects of climate on organic carbon and the ratio of planktonic to benthic primary producers in a subarctic lake during the past 45 years
  publication-title: Limnol. Oceanogr.
  doi: 10.4319/lo.2009.54.5.1723
– volume: 12
  year: 2019
  ident: 10.1016/j.mimet.2020.105901_bb0095
  article-title: Fabrication of microscope stage for vertical observation with temperature control function
  publication-title: J. Vis. Exp.
– volume: 2
  start-page: 333
  year: 2010
  ident: 10.1016/j.mimet.2020.105901_bb0025
  article-title: Oceanographic and biogeochemical insights from diatom genomes
  publication-title: Annu. Rev. Mar. Sci.
  doi: 10.1146/annurev-marine-120308-081051
– volume: 9
  start-page: 359
  year: 1995
  ident: 10.1016/j.mimet.2020.105901_bb0110
  article-title: Production and dissolution of biogenic silica in the ocean - revised global estimates, comparison with regional data and relationship to biogenic sedimentation
  publication-title: Glob. Biogeochem. Cycle
  doi: 10.1029/95GB01070
– volume: 459
  start-page: 185
  year: 2009
  ident: 10.1016/j.mimet.2020.105901_bb0015
  article-title: The life of diatoms in the world's oceans
  publication-title: Nature
  doi: 10.1038/nature08057
– volume: 19
  start-page: 181
  year: 2004
  ident: 10.1016/j.mimet.2020.105901_bb0045
  article-title: The ups and downs of life in a benthic biofilm: migration of benthic diatoms
  publication-title: Diatom Res.
  doi: 10.1080/0269249X.2004.9705870
– volume: 25
  start-page: 365
  year: 2003
  ident: 10.1016/j.mimet.2020.105901_bb0115
  article-title: Phytoplankton sinking rates in the Rhine region of freshwater influence
  publication-title: J. Plankton Res.
  doi: 10.1093/plankt/25.4.365
– volume: 53
  start-page: 469
  year: 2008
  ident: 10.1016/j.mimet.2020.105901_bb0120
  article-title: Production, oxygen respiration rates, and sinking velocity of copepod fecal pellets: direct measurements of ballasting by opal and calcite
  publication-title: Limnol. Oceanogr.
  doi: 10.4319/lo.2008.53.2.0469
SSID ssj0015348
Score 2.3358967
Snippet Diatoms are one of the earth's major oxygen producers. For that reason, studying the floating phenomena of living diatom cells in water is an important...
SourceID proquest
pubmed
crossref
elsevier
SourceType Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 105901
SubjectTerms ambient temperature
Bacillariophyceae
computer software
Floating diatom
freshwater
microscopy
nutrient solutions
oxygen
photosynthesis
Self-made glass chamber
Temperature control stage
Tumbled microscope
Title Unique observation method of temperature dependence of diatom floating by direct microscope
URI https://dx.doi.org/10.1016/j.mimet.2020.105901
https://www.ncbi.nlm.nih.gov/pubmed/32199876
https://www.proquest.com/docview/2381846774
https://www.proquest.com/docview/2439393333
Volume 172
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV3NS8MwFA9jIngRv50fI4JH67b0I-1xDMdU3EUHAw8lnzBZ2-G2wy7-7eYlbUHQHaSnNAmkL-nLa_N7vx9Ct5oLs0wY9yIVMy-gXHhxrKQnlJDaFKMuh-Tkl3E0mgRP03DaQIMqFwZglaXvdz7deuvyTqe0Zmcxm3VeAUBP4WQIovquTb8G9jqzpu-_apiHeaGtgpbl94bWFfOQxXhls0wBoJJYvdukVIb5ZXf6K_q0u9DwAO2X4SPuuxEeoobKj9CuE5TcHKP3ieVjxQWvf7ZipxGNC42BhqrkUMaV-K1QUANyHUWG9bxgAIPGfIOdXXAGgD2bunKCJsOHt8HIK-UTPBGE8cqLGe1pHjCtmY4EDZmfCNFLAkmJ7kme9GIlTPBgPF4iecgjoWOppJ-wSAuiCfdPUTMvcnWOsG8-ogXVnJruASMyZjqUfjdRAeHEBIwtRCqzpaLkFgeJi3lagcg-UmvrFGydOlu30F3daeGoNbY3j6r5SH-skNQ4_-0db6rZM5VLOBBhuSrWy9SGK2anoMGWNiZiM5cPD3nmpr4erU8gQ5FGF_8d2iXag5IDUF6h5upzra5NkLPibbuK22in__g8Gn8Dsjj9fA
linkProvider Elsevier
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1LSwMxEA6lInoR32-N4NGlbTa72T2KKNU-LloQPIQ8odJ2RevBf28myRYE7UH2tJsMZCdh8u1m5vsQurRSuWUiZJKbQiSUSZUUhdGJMkpbd5u3JRQnD4Z5d0QfnrPnBrqpa2EgrTLG_hDTfbSOT1rRm6238bj1CAn0DE6GANW3ofx6BdipaBOtXN_3usPFYUKWehEtT_ENBjX5kE_zmo6nBnIqiZe8LaM4zC8b1F8A1G9Ed5toIyJIfB0GuYUaZraNVoOm5NcOehl5SlZcycX_VhxkonFlMTBRRRplXOvfKgMtoNhRTbGdVAIyobH8wsE1eAo5e756ZReN7m6fbrpJVFBIFM2KeVII1rGSCmuFzRXLRFoq1SmpZsR2tCw7hVEOP7igV2qZyVzZQhudliK3ilgi0z3UnFUzc4Bw6r6jFbOSOXMqiC6EzXTaLg0lkjjMeIhI7TauIr04qFxMeJ1H9sq9rzn4mgdfH6KrhdFbYNdY3j2v54P_WCTcxf_lhhf17LnGDzgTETNTfX5wj1jcZsHokj4OtLkrhZfcD1O_GG1KoEiR5Uf_Hdo5Wus-Dfq8fz_sHaN1aAn5lCeoOX__NKcO88zlWVzT314AADw
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Unique+observation+method+of+temperature+dependence+of+diatom+floating+by+direct+microscope&rft.jtitle=Journal+of+microbiological+methods&rft.au=Ide%2C+Yuki&rft.au=Matsukawa%2C+Yuji&rft.au=Miyashiro%2C+Daisuke&rft.au=Mayama%2C+Shigeki&rft.date=2020-05-01&rft.issn=0167-7012&rft.volume=172+p.105901-&rft_id=info:doi/10.1016%2Fj.mimet.2020.105901&rft.externalDBID=NO_FULL_TEXT
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0167-7012&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0167-7012&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0167-7012&client=summon