Expansion of the genotypic and phenotypic spectrum of CTCF‐related disorder guides clinical management: 43 new subjects and a comprehensive literature review
Monoallelic variants of CTCF cause an autosomal dominant neurodevelopmental disorder with a wide range of features, including impacts on the brain, growth, and craniofacial development. A growing number of subjects with CTCF‐related disorder (CRD) have been identified due to the increased applicatio...
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Published in | American journal of medical genetics. Part A Vol. 191; no. 3; pp. 718 - 729 |
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Main Authors | , , , , , |
Format | Journal Article |
Language | English |
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Hoboken, USA
John Wiley & Sons, Inc
01.03.2023
Wiley Subscription Services, Inc |
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Abstract | Monoallelic variants of CTCF cause an autosomal dominant neurodevelopmental disorder with a wide range of features, including impacts on the brain, growth, and craniofacial development. A growing number of subjects with CTCF‐related disorder (CRD) have been identified due to the increased application of exome sequencing, and further delineation of the clinical spectrum of CRD is needed. Here, we examined the clinical features, including facial profiles, and genotypic spectrum of 107 subjects with identified CTCF variants, including 43 new and 64 previously described subjects. Among the 43 new subjects, 23 novel variants were reported. The cardinal clinical features in subjects with CRD included intellectual disability/developmental delay (91%) with speech delay (65%), motor delay (53%), feeding difficulties/failure to thrive (66%), ocular abnormalities (56%), musculoskeletal anomalies (53%), and behavioral problems (52%). Other congenital anomalies were also reported, but none of them were common. Our findings expanded the genotypic and phenotypic spectrum of CRD that will guide genetic counseling, management, and surveillance care for patients with CRD. Additionally, a newly built facial gestalt on the Face2Gene tool will facilitate prompt recognition of CRD by physicians and shorten a patient's diagnostic odyssey. |
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AbstractList | Monoallelic variants of CTCF cause an autosomal dominant neurodevelopmental disorder with a wide range of features, including impacts on the brain, growth, and craniofacial development. A growing number of subjects with CTCF‐related disorder (CRD) have been identified due to the increased application of exome sequencing, and further delineation of the clinical spectrum of CRD is needed. Here, we examined the clinical features, including facial profiles, and genotypic spectrum of 107 subjects with identified CTCF variants, including 43 new and 64 previously described subjects. Among the 43 new subjects, 23 novel variants were reported. The cardinal clinical features in subjects with CRD included intellectual disability/developmental delay (91%) with speech delay (65%), motor delay (53%), feeding difficulties/failure to thrive (66%), ocular abnormalities (56%), musculoskeletal anomalies (53%), and behavioral problems (52%). Other congenital anomalies were also reported, but none of them were common. Our findings expanded the genotypic and phenotypic spectrum of CRD that will guide genetic counseling, management, and surveillance care for patients with CRD. Additionally, a newly built facial gestalt on the Face2Gene tool will facilitate prompt recognition of CRD by physicians and shorten a patient's diagnostic odyssey. Monoallelic variants of CTCF cause an autosomal dominant neurodevelopmental disorder with a wide range of features, including impacts on the brain, growth, and craniofacial development. A growing number of subjects with CTCF-related disorder (CRD) have been identified due to the increased application of exome sequencing, and further delineation of the clinical spectrum of CRD is needed. Here, we examined the clinical features, including facial profiles, and genotypic spectrum of 107 subjects with identified CTCF variants, including 43 new and 64 previously described subjects. Among the 43 new subjects, 23 novel variants were reported. The cardinal clinical features in subjects with CRD included intellectual disability/developmental delay (91%) with speech delay (65%) and motor delay (53%), feeding difficulties/failure to thrive (66%), ocular abnormalities (56%), musculoskeletal anomalies (53%), and behavioral problems (52%). Other congenital anomalies were also reported, but none of them were common. Our findings expanded the genotypic and phenotypic spectrum of CRD that will guide genetic counseling, management and surveillance care for CRD patients. Additionally, a newly built facial gestalt on the Face2Gene tool will facilitate prompt recognition of CRD by physicians and shorten a patient’s diagnostic odyssey. Monoallelic variants of CTCF cause an autosomal dominant neurodevelopmental disorder with a wide range of features, including impacts on the brain, growth, and craniofacial development. A growing number of subjects with CTCF‐related disorder (CRD) have been identified due to the increased application of exome sequencing, and further delineation of the clinical spectrum of CRD is needed. Here, we examined the clinical features, including facial profiles, and genotypic spectrum of 107 subjects with identified CTCF variants, including 43 new and 64 previously described subjects. Among the 43 new subjects, 23 novel variants were reported. The cardinal clinical features in subjects with CRD included intellectual disability/developmental delay (91%) with speech delay (65%), motor delay (53%), feeding difficulties/failure to thrive (66%), ocular abnormalities (56%), musculoskeletal anomalies (53%), and behavioral problems (52%). Other congenital anomalies were also reported, but none of them were common. Our findings expanded the genotypic and phenotypic spectrum of CRD that will guide genetic counseling, management, and surveillance care for patients with CRD. Additionally, a newly built facial gestalt on the Face2Gene tool will facilitate prompt recognition of CRD by physicians and shorten a patient's diagnostic odyssey. Monoallelic variants of CTCF cause an autosomal dominant neurodevelopmental disorder with a wide range of features, including impacts on the brain, growth, and craniofacial development. A growing number of subjects with CTCF-related disorder (CRD) have been identified due to the increased application of exome sequencing, and further delineation of the clinical spectrum of CRD is needed. Here, we examined the clinical features, including facial profiles, and genotypic spectrum of 107 subjects with identified CTCF variants, including 43 new and 64 previously described subjects. Among the 43 new subjects, 23 novel variants were reported. The cardinal clinical features in subjects with CRD included intellectual disability/developmental delay (91%) with speech delay (65%), motor delay (53%), feeding difficulties/failure to thrive (66%), ocular abnormalities (56%), musculoskeletal anomalies (53%), and behavioral problems (52%). Other congenital anomalies were also reported, but none of them were common. Our findings expanded the genotypic and phenotypic spectrum of CRD that will guide genetic counseling, management, and surveillance care for patients with CRD. Additionally, a newly built facial gestalt on the Face2Gene tool will facilitate prompt recognition of CRD by physicians and shorten a patient's diagnostic odyssey.Monoallelic variants of CTCF cause an autosomal dominant neurodevelopmental disorder with a wide range of features, including impacts on the brain, growth, and craniofacial development. A growing number of subjects with CTCF-related disorder (CRD) have been identified due to the increased application of exome sequencing, and further delineation of the clinical spectrum of CRD is needed. Here, we examined the clinical features, including facial profiles, and genotypic spectrum of 107 subjects with identified CTCF variants, including 43 new and 64 previously described subjects. Among the 43 new subjects, 23 novel variants were reported. The cardinal clinical features in subjects with CRD included intellectual disability/developmental delay (91%) with speech delay (65%), motor delay (53%), feeding difficulties/failure to thrive (66%), ocular abnormalities (56%), musculoskeletal anomalies (53%), and behavioral problems (52%). Other congenital anomalies were also reported, but none of them were common. Our findings expanded the genotypic and phenotypic spectrum of CRD that will guide genetic counseling, management, and surveillance care for patients with CRD. Additionally, a newly built facial gestalt on the Face2Gene tool will facilitate prompt recognition of CRD by physicians and shorten a patient's diagnostic odyssey. |
Author | Garber, Kathryn Valverde de Morales, Hannah Gabriela Li, Hong Wang, Hsiao‐Lin V. Cheng, Xiaodong Corces, Victor G. |
AuthorAffiliation | 3 Department of Pediatrics, Emory University School of Medicine, Atlanta, GA. 30322 1 Department of Human Genetics, Emory University School of Medicine, Atlanta, GA. 30322 2 Department of Epigenetics and Molecular Carcinogenesis, The University of Texas MD Anderson Cancer Center, Houston, TX. 77030 |
AuthorAffiliation_xml | – name: 1 Department of Human Genetics, Emory University School of Medicine, Atlanta, GA. 30322 – name: 2 Department of Epigenetics and Molecular Carcinogenesis, The University of Texas MD Anderson Cancer Center, Houston, TX. 77030 – name: 3 Department of Pediatrics, Emory University School of Medicine, Atlanta, GA. 30322 |
Author_xml | – sequence: 1 givenname: Hannah Gabriela orcidid: 0000-0001-7359-7694 surname: Valverde de Morales fullname: Valverde de Morales, Hannah Gabriela organization: Emory University School of Medicine – sequence: 2 givenname: Hsiao‐Lin V. surname: Wang fullname: Wang, Hsiao‐Lin V. organization: Emory University School of Medicine – sequence: 3 givenname: Kathryn surname: Garber fullname: Garber, Kathryn organization: Emory University School of Medicine – sequence: 4 givenname: Xiaodong surname: Cheng fullname: Cheng, Xiaodong organization: The University of Texas MD Anderson Cancer Center – sequence: 5 givenname: Victor G. surname: Corces fullname: Corces, Victor G. organization: Emory University School of Medicine – sequence: 6 givenname: Hong orcidid: 0000-0002-9367-0761 surname: Li fullname: Li, Hong email: hong.li@emory.edu organization: Emory University School of Medicine |
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CitedBy_id | crossref_primary_10_1073_pnas_2416384122 crossref_primary_10_1016_j_jbc_2025_108337 crossref_primary_10_1016_j_gde_2024_102244 crossref_primary_10_1016_j_isci_2024_111452 crossref_primary_10_1016_j_xgen_2025_100813 crossref_primary_10_1016_j_neubiorev_2023_105293 crossref_primary_10_1038_s41467_023_41964_6 crossref_primary_10_1016_j_gim_2023_101041 crossref_primary_10_1093_nar_gkad594 crossref_primary_10_3389_fnmol_2023_1185796 |
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Keywords | phenotype variant CTCF facial gestalt gene genotype |
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Notes | Funding information F32 ES031827; R35 GM134744 (XC); R35 GM139408 ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 14 ObjectType-Article-2 ObjectType-Feature-3 content type line 23 ObjectType-Review-1 This manuscript has been read and approved by all listed authors, and there are no other persons who satisfied the criteria for authorship but are not listed. We further confirm that the order of authors listed in the manuscript has been approved by all of us. Author Contribution Hannah Gabriela Valverde de Morales: intensively involved with the patient/family consent, questionnaire design, data collection and analysis, literature review, drafted initial manuscript, and continuing review and editing.Hsiao-Lin V. Wang: involved in extensive literature review on CTCF function, variant database and reference management, writing the related content in the manuscript. Critically reviewed and revised the manuscript.Kathryn Garber: intensively involved in variant curation and reclassification based on the updated clinical data and biochemical properties of CTCF protein. Critically reviewed and revised the manuscript.Xiaodong Cheng: conducted the graphic modeling of CTCF variants and provided expertise in interpreting their potential structural or functional effects to assist in variant curation. Reviewed and revised the manuscript.Victor G. Corces: Conceptualized this study as a part of Emory CRD project, provided his expertise on current knowledge of the CTCF gene and protein. Critically reviewed and revised the manuscript.Hong Li: Conceptualized this study on expanding the genotype and phenotype spectrum of CRD, and supervised the consent, data collection, analysis and review. Critically reviewed and revised the manuscript. |
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Snippet | Monoallelic variants of CTCF cause an autosomal dominant neurodevelopmental disorder with a wide range of features, including impacts on the brain, growth, and... Monoallelic variants of CTCF cause an autosomal dominant neurodevelopmental disorder with a wide range of features, including impacts on the brain, growth, and... |
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SubjectTerms | Congenital defects Craniofacial growth CTCF facial gestalt gene Genetic counseling Genotype Hereditary diseases Humans Intellectual disabilities Intellectual Disability - diagnosis Intellectual Disability - genetics Language Development Disorders - genetics Literature reviews Mutation Neurodevelopmental disorders Phenotype variant |
Title | Expansion of the genotypic and phenotypic spectrum of CTCF‐related disorder guides clinical management: 43 new subjects and a comprehensive literature review |
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