Y-chromosome and mitochondrial DNA studies on the population structure of the Christmas Island community
Christmas Island is a remote Australian territory located close to the main Indonesian island of Java. Y‐chromosome and mitochondrial DNA (mtDNA) markers were used to investigate the genetic structure of the population, which comprises communities of mixed ethnic origin. Analysis of 12 Y‐chromosome...
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Published in | American journal of physical anthropology Vol. 128; no. 3; pp. 670 - 677 |
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Language | English |
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Abstract | Christmas Island is a remote Australian territory located close to the main Indonesian island of Java. Y‐chromosome and mitochondrial DNA (mtDNA) markers were used to investigate the genetic structure of the population, which comprises communities of mixed ethnic origin. Analysis of 12 Y‐chromosome biallelic polymorphisms revealed a high level of gene diversity and haplotype frequencies that were consistent with source populations in southern China and Southeast Asia. mtDNA hypervariable segment I (HVS‐I) sequences displayed high levels of haplotype diversity and nucleotide diversity that were comparable to various Asian populations. Genetic distances revealed extremely low mtDNA differentiation among Christmas Islanders and Asian populations. This was supported by the relatively high proportion of sequence types shared among these populations. The most common mtDNA haplogroups were M* and B, followed by D and F, which are prevalent in East/Southeast Asia. Christmas Islanders of European descent were characterized by the Eurasian haplogroup R*, and a limited degree of admixture was observed. In general, analysis of the genetic data indicated population affinities to southern Chinese (in particular from the Yunnan Province) and Southeast Asia (Thailand, Malaysia, and Cambodia), which was consistent with historical records of settlement. The combined use of these different marker systems provides a useful and appropriate model for the study of contemporary populations derived from different ethnic origins. Am J Phys Anthropol, 2005. © 2005 Wiley‐Liss, Inc. |
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AbstractList | Christmas Island is a remote Australian territory located close to the main Indonesian island of Java. Y-chromosome and mitochondrial DNA (mtDNA) markers were used to investigate the genetic structure of the population, which comprises communities of mixed ethnic origin. Analysis of 12 Y-chromosome biallelic polymorphisms revealed a high level of gene diversity and haplotype frequencies that were consistent with source populations in southern China and Southeast Asia. mtDNA hypervariable segment I (HVS-I) sequences displayed high levels of haplotype diversity and nucleotide diversity that were comparable to various Asian populations. Genetic distances revealed extremely low mtDNA differentiation among Christmas Islanders and Asian populations. This was supported by the relatively high proportion of sequence types shared among these populations. The most common mtDNA haplogroups were M* and B, followed by D and F, which are prevalent in East/Southeast Asia. Christmas Islanders of European descent were characterized by the Eurasian haplogroup R*, and a limited degree of admixture was observed. In general, analysis of the genetic data indicated population affinities to southern Chinese (in particular from the Yunnan Province) and Southeast Asia (Thailand, Malaysia, and Cambodia), which was consistent with historical records of settlement. The combined use of these different marker systems provides a useful and appropriate model for the study of contemporary populations derived from different ethnic origins. Christmas Island is a remote Australian territory located close to the main Indonesian island of Java. Y‐chromosome and mitochondrial DNA (mtDNA) markers were used to investigate the genetic structure of the population, which comprises communities of mixed ethnic origin. Analysis of 12 Y‐chromosome biallelic polymorphisms revealed a high level of gene diversity and haplotype frequencies that were consistent with source populations in southern China and Southeast Asia. mtDNA hypervariable segment I (HVS‐I) sequences displayed high levels of haplotype diversity and nucleotide diversity that were comparable to various Asian populations. Genetic distances revealed extremely low mtDNA differentiation among Christmas Islanders and Asian populations. This was supported by the relatively high proportion of sequence types shared among these populations. The most common mtDNA haplogroups were M* and B, followed by D and F, which are prevalent in East/Southeast Asia. Christmas Islanders of European descent were characterized by the Eurasian haplogroup R*, and a limited degree of admixture was observed. In general, analysis of the genetic data indicated population affinities to southern Chinese (in particular from the Yunnan Province) and Southeast Asia (Thailand, Malaysia, and Cambodia), which was consistent with historical records of settlement. The combined use of these different marker systems provides a useful and appropriate model for the study of contemporary populations derived from different ethnic origins. Am J Phys Anthropol, 2005. © 2005 Wiley‐Liss, Inc. Abstract Christmas Island is a remote Australian territory located close to the main Indonesian island of Java. Y‐chromosome and mitochondrial DNA (mtDNA) markers were used to investigate the genetic structure of the population, which comprises communities of mixed ethnic origin. Analysis of 12 Y‐chromosome biallelic polymorphisms revealed a high level of gene diversity and haplotype frequencies that were consistent with source populations in southern China and Southeast Asia. mtDNA hypervariable segment I (HVS‐I) sequences displayed high levels of haplotype diversity and nucleotide diversity that were comparable to various Asian populations. Genetic distances revealed extremely low mtDNA differentiation among Christmas Islanders and Asian populations. This was supported by the relatively high proportion of sequence types shared among these populations. The most common mtDNA haplogroups were M* and B, followed by D and F, which are prevalent in East/Southeast Asia. Christmas Islanders of European descent were characterized by the Eurasian haplogroup R*, and a limited degree of admixture was observed. In general, analysis of the genetic data indicated population affinities to southern Chinese (in particular from the Yunnan Province) and Southeast Asia (Thailand, Malaysia, and Cambodia), which was consistent with historical records of settlement. The combined use of these different marker systems provides a useful and appropriate model for the study of contemporary populations derived from different ethnic origins. Am J Phys Anthropol, 2005. © 2005 Wiley‐Liss, Inc. Christmas Island is a remote Australian territory located close to the main Indonesian island of Java. Y-chromosome and mitochondrial DNA (mtDNA) markers were used to investigate the genetic structure of the population, which comprises communities of mixed ethnic origin. Analysis of 12 Y-chromosome biallelic polymorphisms revealed a high level of gene diversity and haplotype frequencies that were consistent with source populations in southern China and Southeast Asia. mtDNA hypervariable segment I (HVS-I) sequences displayed high levels of haplotype diversity and nucleotide diversity that were comparable to various Asian populations. Genetic distances revealed extremely low mtDNA differentiation among Christmas Islanders and Asian populations. This was supported by the relatively high proportion of sequence types shared among these populations. The most common mtDNA haplogroups were M* and B, followed by D and F, which are prevalent in East/Southeast Asia. Christmas Islanders of European descent were characterized by the Eurasian haplogroup R*, and a limited degree of admixture was observed. In general, analysis of the genetic data indicated population affinities to southern Chinese (in particular from the Yunnan Province) and Southeast Asia (Thailand, Malaysia, and Cambodia), which was consistent with historical records of settlement. The combined use of these different marker systems provides a useful and appropriate model for the study of contemporary populations derived from different ethnic origins. Am J Phys Anthropol, 2005. |
Author | Wise, Cheryl A. Bittles, Alan H. Black, Michael L. Erber, Wendy N. Sullivan, Sheena G. |
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Cites_doi | 10.1086/323299 10.1086/302204 10.1007/s100380170091 10.1007/s100380200042 10.1038/290457a0 10.1086/302680 10.1029/96PA03934 10.1126/science.290.5494.1155 10.1046/j.1469-1809.2001.6510043.x 10.1520/JFS14909J 10.1038/81685 10.1086/383236 10.1353/hub.2002.0034 10.1093/oxfordjournals.molbev.a003996 10.1007/s004390000403 10.1111/j.1365-2656.2006.01186.x 10.1002/rcm.1038 10.1007/BF01225046 10.1093/genetics/130.1.139 10.1007/BF02289565 10.1007/s004390000406 10.1007/s00439-003-0945-1 10.1002/ajpa.10056 10.1093/genetics/152.3.1103 10.1086/302825 10.1093/bioinformatics/17.12.1244 10.1002/ajpa.10052 10.1111/j.1365-294X.2006.02908.x 10.1016/S0002-9297(07)62954-1 10.1086/344348 10.1007/s00439-003-0948-y 10.1086/338999 10.1007/s10038-004-0131-x 10.1101/gr.217602 10.1126/science.1840702 |
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Keywords | Origin Study southern China Genetic genetic variation Mitochondrial DNA Island Source Land use Settlement Type Southeast Asia Analysis Population contemporary population Various |
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References | Melton T, Clifford S, Kayser M, Nasidze I, Batzer M, Stoneking M. 2001. Diversity and heterogeneity in mitochondrial DNA of North American populations. J Forensic Sci 46: 46-52. Piercy R, Sullivan KM, Benson N, Gill P. 1993. The application of mitochondrial DNA typing to the study of white Caucasian genetic identification. Int J Leg Med 106: 85-90. Nei M. 1987. Molecular evolutionary genetics. New York: Columbia University Press. Schurr TG, Wallace DC. 2002. Mitochondrial DNA diversity in Southeast Asian populations. Hum Biol 74: 431-452. Su B, Xiao J, Underhill P, Deka R, Zhang W, Akey J, Huang W, Shen D, Lu D, Luo J, Chu J, Tan J, Shen P, Davis R, Cavalli-Sforza L, Chakraborty R, Xiong M, Du R, Oefner P, Chen Z, Jin L. 1999. Y-chromosome evidence for a northward migration of modern humans into eastern Asia during the last Ice Age. Am J Hum Genet 65: 1718-1724. Wang W, Wise C, Baric T, Black ML, Bittles AH. 2003. The origins and genetic structure of three co-resident Chinese Muslim populations: the Salar, Bo'an and Dongxiang. Hum Genet 113: 244-252. Jorde LB, Watkins WS, Bamshad MJ, Dixon ME, Ricker CE, Seielstad MT, Batzer MA. 2000. The distribution of human genetic diversity: a comparison of mitochondrial, autosomal, and Y-chromosome data. Am J Hum Genet 66: 979-988. Karafet T, Xu L, Du R, Wang W, Feng S, Wells RS, Redd AJ, Zegura SL, Hammer MF. 2001. Paternal population history of East Asia: sources, patterns, and microevolutionary processes. Am J Hum Genet 69: 615-628. Underhill P, Passarino G, Lin AA, Shen P, Lahr MM, Foley RA, Oefner PJ, Cavalli-Sforza LL. 2001. The pylogeography of Y chromosome binary haplotypes and the origins of modern human populations. Ann Hum Genet 65: 43-62. Vigilant L, Stoneking M, Harpending H, Hawkes K, Wilson AC. 1991. African populations and the evolution of human mitochondrial DNA. Science 253: 1503-1507. Yao YG, Nie L, Harpending H, Fu YX, Yuan ZG, Zhang YP. 2002b. Genetic relationship of Chinese ethnic populations revealed by mtDNA sequence diversity. Am J Phys Anthropol 118: 63-76. Redd AJ, Takezaki N, Sherry ST, McGarvey ST, Sofro ASM, Stoneking M. 1995. Evolutionary history of the COII/tRNALysintergenic 9 base pair deletion in human mitochondrial DNAs from the Pacific. Mol Biol Evol 12: 604-615. Quintana-Murci L, Chaix R, Wells RS, Behar DM, et al. 2004. Where West meets East: the complex mtDNA landscape of the Southwest and Central Asian corridor. Am J Hum Genet 74: 827-845. Salas A, Richards M, De la Fe T, Lareu MV, Sobrino B, Sanchez-Diz P, Macaulay V, Carracedo A. 2002. The making of the African mtDNA landscape. Am J Hum Genet 71: 1082-1111. StatSoft, Inc. 2001. STATISTICA (data analysis software system)version 6. www.statsoft.com. Wise CA, Paris M, Morar B, Wang W, Kalaydjieva L, Bittles AH. 2003. A standard protocol for single nucleotide primer extension in the human genome using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Rapid Commun Mass Spectrom 17: 1195-1202. Meyer S, Weiss G, von Haeseler A. 1999. Pattern of nucleotide substitution and rate heterogeneity in the hypervariable regions I and II of human mtDNA. Genetics 152: 1103-1110. Kumar S, Tamura K, Jakobsen IB, Nei M. 2001. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17: 1244-1245. Yao YG, Zhang YP. 2002. Phylogeographic analysis of mtDNA variation in four ethnic populations from Yunnan Province: new data and a reappraisal. J Hum Genet 47: 311-318. Su B, Xiao C, Deka R, Seielstad MT, Kangwanpong D, Xiao J, Lu D, Underhill P, Cavalli-Sforza L, Chakraborty R, Jin L. 2000. Y chromosome haplotypes reveal prehistorical migrations to the Himalayas. Hum Genet 107: 582-590. Kruskal JB. 1964. Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis. Pyschometrika 29: 1-27. Tamura K, Nei M. 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol 10: 512-526. Underhill PA, Shen P, Lin AA, Jin L, Passarino G, Yang WH, Kauffman E, Bonné-Tamir B, Bertranpetit J, Francalacci P, Ibrahim M, Jenkins T, Kidd JR, Mehdi SQ, Seielstad MT, Wells RS, Piazza A, Davis RW, Feldman MW, Cavalli-Sforza LL, Oefner PJ. 2000. Y chromosome sequence variation and the history of human populations. Nat Genet 26: 358-361. Yao YG, Kong QP, Bandelt HJ, Kivisild T, Zhang YP. 2002a. Phylogeographic differentiation of mitochondrial DNA in Han Chinese. Am J Hum Genet 70: 635-651. Schneider S, Roessli D, Excoffier L. 2000. Arlequin version 2.000: a software for population genetics data analysis. Geneva: Genetics and Biometry Laboratory, University of Geneva. Tajima A, Hayami M, Tokunaga K, Juji T, Matsuo M, Marzuki S, Omoto K, Horai S. 2004. Genetic origins of the Ainu inferred from combined DNA analyses of maternal and paternal lineages. J Hum Genet 49: 187-193. Yao YG, Watkins WS, Zhang YP. 2000. Evolutionary history of the mtDNA 9-bp deletion in Chinese populations and its relevance to the peopling of East and Southeast Asia. Hum Genet 107: 504-512. Horai S, Murayama K, Hayasaka K, Matsubayashi S, Hattori Y, Fucharoen G, Harihara S, Park KS, Omoto K, Pan IH. 1996. mtDNA polymorphism in East Asian Populations, with special reference to the peopling of Japan. Am J Hum Genet 59: 579-590. Kivisild T, Tolk HV, Parik J, Wang Y, Papiha SS, Bandelt HJ, Villems R. 2002. The emerging limbs and twigs of the East Asian mtDNA tree. Mol Biol Evol 19: 1737-1751. Semino O, Passarino G, Oefner PJ, Lin AA, Arbuzova S, Beckman LE, De Benedictis G, Francalacci P, Kouvatsi A, Limborska S, Marcikiae M, Mika A, Mika B, Primorac D, Santachiara-Benerecetti AS, Cavalli-Sforza LL, Underhill PA. 2000. The genetic legacy of Paleolithic Homo sapiens sapiensin extant Europeans: a Y chromosome perspective. Science 290: 1155-1159. Qian YP, Chu ZT, Dai Q, Wei CD, Chu JY, Tajima A, Horai S. 2001. Mitochondrial DNA polymorphisms in Yunnan nationalities in China. J Hum Genet 46: 211-220. Anderson S, Bankier AT, Barrell BG, de Bruijn MHL, Coulson AR, Drouin J, Eperon IC, Nierlich DP, Roe BA, Sanger F, Schreier PH, Smith AJH, Staden R, Young IG. 1981. Sequence and organization of the human mitochondrial genome. Nature 290: 457-465. Ballinger SW, Schurr TG, Torroni A, Gan YY, Hodge JA, Hassan K, Chen KH, Wallace DC. 1992. Southeast Asian mitochondrial DNA analysis reveals genetic continuity of ancient Mongoloid migrations. Genetics 130: 139-152. Richards M, Macaulay V, Hickey E, Vega E, et al. 2000. Tracing European founder lineages in the Near Eastern mtDNA pool. Am J Hum Genet 67: 1251-1276. Oota H, Kitano T, Jin F, Yuasa I, Wang L, Ueda S, Saitou N, Stoneking M. 2002. Extreme mtDNA homogeneity in continental Asian populations. Am J Phys Anthropol 118: 146-153. Y Chromosome Consortium. 2002. A nomenclature system for the tree of human Y-chromosomal binary haplogroups. Genome Res 12: 339-348. Macaulay V, Richards M, Hickey E, Vega E, Cruciani F, Guida V, Scozzari R, Bonné-Tamir B, Sykes B, Torroni A. 1999. The emerging tree of West Eurasian mtDNAs: a synthesis of control-region sequences and RFLPs. Am J Hum Genet 64: 232-249. Excoffier L, Smouse PE, Quattro JM. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491. Tajima A, Sun C-S, Pan I-H, Ishida T, Saitou N, Horai S. 2003. Mitochondrial DNA polymorphisms in nine aboriginal groups of Taiwan: implications for the population history of aboriginal Taiwanese. Hum Genet 113: 24-33. 1991; 253 1993; 106 2002; 19 1964; 29 2002; 74 2000; 26 2000; 67 2004; 49 2002; 12 2000; 66 1995; 12 2002; 118 1999; 65 1999; 64 2003; 17 2002 2001; 46 2003; 113 1996; 59 2001; 69 2000; 290 2001; 65 2004; 74 2002; 47 1981; 290 1992; 130 2001 1992; 131 2000 2000; 107 1993; 10 1987 1999; 152 2002; 71 2001; 17 2002b; 118 2002a; 70 e_1_2_1_41_1 e_1_2_1_40_1 Commonwealth of Australia (e_1_2_1_4_1) 2002 e_1_2_1_24_1 e_1_2_1_21_1 e_1_2_1_22_1 Schneider S (e_1_2_1_23_1) 2000 e_1_2_1_27_1 Redd AJ (e_1_2_1_20_1) 1995; 12 e_1_2_1_28_1 e_1_2_1_25_1 Tajima A (e_1_2_1_29_1) 2003; 113 e_1_2_1_7_1 e_1_2_1_31_1 e_1_2_1_8_1 e_1_2_1_30_1 e_1_2_1_5_1 e_1_2_1_3_1 e_1_2_1_12_1 e_1_2_1_35_1 e_1_2_1_13_1 e_1_2_1_34_1 e_1_2_1_10_1 e_1_2_1_33_1 e_1_2_1_2_1 e_1_2_1_11_1 e_1_2_1_32_1 e_1_2_1_16_1 e_1_2_1_39_1 e_1_2_1_17_1 StatSoft, Inc. (e_1_2_1_26_1) 2001 e_1_2_1_38_1 Horai S (e_1_2_1_6_1) 1996; 59 e_1_2_1_14_1 e_1_2_1_37_1 e_1_2_1_15_1 e_1_2_1_36_1 e_1_2_1_9_1 e_1_2_1_18_1 e_1_2_1_19_1 |
References_xml | – volume: 70 start-page: 635 year: 2002a end-page: 651 article-title: Phylogeographic differentiation of mitochondrial DNA in Han Chinese publication-title: Am J Hum Genet – volume: 113 start-page: 24 year: 2003 end-page: 33 article-title: Mitochondrial DNA polymorphisms in nine aboriginal groups of Taiwan: implications for the population history of aboriginal Taiwanese publication-title: Hum Genet – volume: 17 start-page: 1195 year: 2003 end-page: 1202 article-title: A standard protocol for single nucleotide primer extension in the human genome using matrix‐assisted laser desorption/ionization time‐of‐flight mass spectrometry publication-title: Rapid Commun Mass Spectrom – volume: 46 start-page: 211 year: 2001 end-page: 220 article-title: Mitochondrial DNA polymorphisms in Yunnan nationalities in China publication-title: J Hum Genet – volume: 47 start-page: 311 year: 2002 end-page: 318 article-title: Phylogeographic analysis of mtDNA variation in four ethnic populations from Yunnan Province: new data and a reappraisal publication-title: J Hum Genet – volume: 113 start-page: 244 year: 2003 end-page: 252 article-title: The origins and genetic structure of three co‐resident Chinese Muslim populations: the Salar, Bo'an and Dongxiang publication-title: Hum Genet – volume: 19 start-page: 1737 year: 2002 end-page: 1751 article-title: The emerging limbs and twigs of the East Asian mtDNA tree publication-title: Mol Biol Evol – volume: 71 start-page: 1082 year: 2002 end-page: 1111 article-title: The making of the African mtDNA landscape publication-title: Am J Hum Genet – volume: 74 start-page: 431 year: 2002 end-page: 452 article-title: Mitochondrial DNA diversity in Southeast Asian populations publication-title: Hum Biol – volume: 152 start-page: 1103 year: 1999 end-page: 1110 article-title: Pattern of nucleotide substitution and rate heterogeneity in the hypervariable regions I and II of human mtDNA publication-title: Genetics – volume: 12 start-page: 339 year: 2002 end-page: 348 article-title: A nomenclature system for the tree of human Y‐chromosomal binary haplogroups publication-title: Genome Res – volume: 290 start-page: 1155 year: 2000 end-page: 1159 article-title: The genetic legacy of Paleolithic in extant Europeans: a Y chromosome perspective publication-title: Science – year: 1987 – year: 2001 – volume: 74 start-page: 827 year: 2004 end-page: 845 article-title: Where West meets East: the complex mtDNA landscape of the Southwest and Central Asian corridor publication-title: Am J Hum Genet – year: 2000 – volume: 26 start-page: 358 year: 2000 end-page: 361 article-title: Y chromosome sequence variation and the history of human populations publication-title: Nat Genet – volume: 29 start-page: 1 year: 1964 end-page: 27 article-title: Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis publication-title: Pyschometrika – volume: 64 start-page: 232 year: 1999 end-page: 249 article-title: The emerging tree of West Eurasian mtDNAs: a synthesis of control‐region sequences and RFLPs publication-title: Am J Hum Genet – volume: 67 start-page: 1251 year: 2000 end-page: 1276 article-title: Tracing European founder lineages in the Near Eastern mtDNA pool publication-title: Am J Hum Genet – volume: 290 start-page: 457 year: 1981 end-page: 465 article-title: Sequence and organization of the human mitochondrial genome publication-title: Nature – volume: 17 start-page: 1244 year: 2001 end-page: 1245 article-title: MEGA2: molecular evolutionary genetics analysis software publication-title: Bioinformatics – volume: 59 start-page: 579 year: 1996 end-page: 590 article-title: mtDNA polymorphism in East Asian Populations, with special reference to the peopling of Japan publication-title: Am J Hum Genet – volume: 107 start-page: 504 year: 2000 end-page: 512 article-title: Evolutionary history of the mtDNA 9‐bp deletion in Chinese populations and its relevance to the peopling of East and Southeast Asia publication-title: Hum Genet – volume: 46 start-page: 46 year: 2001 end-page: 52 article-title: Diversity and heterogeneity in mitochondrial DNA of North American populations publication-title: J Forensic Sci – volume: 118 start-page: 63 year: 2002b end-page: 76 article-title: Genetic relationship of Chinese ethnic populations revealed by mtDNA sequence diversity publication-title: Am J Phys Anthropol – volume: 106 start-page: 85 year: 1993 end-page: 90 article-title: The application of mitochondrial DNA typing to the study of white Caucasian genetic identification publication-title: Int J Leg Med – volume: 10 start-page: 512 year: 1993 end-page: 526 article-title: Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees publication-title: Mol Biol Evol – volume: 12 start-page: 604 year: 1995 end-page: 615 article-title: Evolutionary history of the COII/tRNA intergenic 9 base pair deletion in human mitochondrial DNAs from the Pacific publication-title: Mol Biol Evol – year: 2002 – volume: 131 start-page: 479 year: 1992 end-page: 491 article-title: Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data publication-title: Genetics – volume: 118 start-page: 146 year: 2002 end-page: 153 article-title: Extreme mtDNA homogeneity in continental Asian populations publication-title: Am J Phys Anthropol – volume: 65 start-page: 1718 year: 1999 end-page: 1724 article-title: Y‐chromosome evidence for a northward migration of modern humans into eastern Asia during the last Ice Age publication-title: Am J Hum Genet – volume: 130 start-page: 139 year: 1992 end-page: 152 article-title: Southeast Asian mitochondrial DNA analysis reveals genetic continuity of ancient Mongoloid migrations publication-title: Genetics – volume: 65 start-page: 43 year: 2001 end-page: 62 article-title: The pylogeography of Y chromosome binary haplotypes and the origins of modern human populations publication-title: Ann Hum Genet – volume: 69 start-page: 615 year: 2001 end-page: 628 article-title: Paternal population history of East Asia: sources, patterns, and microevolutionary processes publication-title: Am J Hum Genet – volume: 49 start-page: 187 year: 2004 end-page: 193 article-title: Genetic origins of the Ainu inferred from combined DNA analyses of maternal and paternal lineages publication-title: J Hum Genet – volume: 253 start-page: 1503 year: 1991 end-page: 1507 article-title: African populations and the evolution of human mitochondrial DNA publication-title: Science – volume: 66 start-page: 979 year: 2000 end-page: 988 article-title: The distribution of human genetic diversity: a comparison of mitochondrial, autosomal, and Y‐chromosome data publication-title: Am J Hum Genet – volume: 107 start-page: 582 year: 2000 end-page: 590 article-title: Y chromosome haplotypes reveal prehistorical migrations to the Himalayas publication-title: Hum Genet – ident: e_1_2_1_8_1 doi: 10.1086/323299 – ident: e_1_2_1_12_1 doi: 10.1086/302204 – ident: e_1_2_1_18_1 doi: 10.1007/s100380170091 – ident: e_1_2_1_37_1 doi: 10.1007/s100380200042 – ident: e_1_2_1_2_1 doi: 10.1038/290457a0 – ident: e_1_2_1_27_1 doi: 10.1086/302680 – ident: e_1_2_1_31_1 doi: 10.1029/96PA03934 – ident: e_1_2_1_25_1 doi: 10.1126/science.290.5494.1155 – ident: e_1_2_1_33_1 doi: 10.1046/j.1469-1809.2001.6510043.x – ident: e_1_2_1_13_1 doi: 10.1520/JFS14909J – ident: e_1_2_1_32_1 doi: 10.1038/81685 – ident: e_1_2_1_19_1 doi: 10.1086/383236 – volume-title: Census of Population and Housing year: 2002 ident: e_1_2_1_4_1 contributor: fullname: Commonwealth of Australia – ident: e_1_2_1_24_1 doi: 10.1353/hub.2002.0034 – ident: e_1_2_1_9_1 doi: 10.1093/oxfordjournals.molbev.a003996 – ident: e_1_2_1_38_1 doi: 10.1007/s004390000403 – ident: e_1_2_1_5_1 doi: 10.1111/j.1365-2656.2006.01186.x – ident: e_1_2_1_36_1 doi: 10.1002/rcm.1038 – ident: e_1_2_1_17_1 doi: 10.1007/BF01225046 – ident: e_1_2_1_3_1 doi: 10.1093/genetics/130.1.139 – ident: e_1_2_1_10_1 doi: 10.1007/BF02289565 – ident: e_1_2_1_28_1 doi: 10.1007/s004390000406 – volume: 113 start-page: 24 year: 2003 ident: e_1_2_1_29_1 article-title: Mitochondrial DNA polymorphisms in nine aboriginal groups of Taiwan: implications for the population history of aboriginal Taiwanese publication-title: Hum Genet doi: 10.1007/s00439-003-0945-1 contributor: fullname: Tajima A – ident: e_1_2_1_16_1 doi: 10.1002/ajpa.10056 – ident: e_1_2_1_14_1 doi: 10.1093/genetics/152.3.1103 – ident: e_1_2_1_7_1 doi: 10.1086/302825 – ident: e_1_2_1_11_1 doi: 10.1093/bioinformatics/17.12.1244 – volume-title: STATISTICA (data analysis software system) year: 2001 ident: e_1_2_1_26_1 contributor: fullname: StatSoft, Inc. – ident: e_1_2_1_40_1 doi: 10.1002/ajpa.10052 – ident: e_1_2_1_15_1 doi: 10.1111/j.1365-294X.2006.02908.x – volume: 12 start-page: 604 year: 1995 ident: e_1_2_1_20_1 article-title: Evolutionary history of the COII/tRNALysintergenic 9 base pair deletion in human mitochondrial DNAs from the Pacific publication-title: Mol Biol Evol contributor: fullname: Redd AJ – ident: e_1_2_1_21_1 doi: 10.1016/S0002-9297(07)62954-1 – ident: e_1_2_1_22_1 doi: 10.1086/344348 – ident: e_1_2_1_35_1 doi: 10.1007/s00439-003-0948-y – ident: e_1_2_1_39_1 doi: 10.1086/338999 – ident: e_1_2_1_30_1 doi: 10.1007/s10038-004-0131-x – volume-title: Arlequin version 2.000: a software for population genetics data analysis year: 2000 ident: e_1_2_1_23_1 contributor: fullname: Schneider S – ident: e_1_2_1_41_1 doi: 10.1101/gr.217602 – volume: 59 start-page: 579 year: 1996 ident: e_1_2_1_6_1 article-title: mtDNA polymorphism in East Asian Populations, with special reference to the peopling of Japan publication-title: Am J Hum Genet contributor: fullname: Horai S – ident: e_1_2_1_34_1 doi: 10.1126/science.1840702 |
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Snippet | Christmas Island is a remote Australian territory located close to the main Indonesian island of Java. Y‐chromosome and mitochondrial DNA (mtDNA) markers were... Christmas Island is a remote Australian territory located close to the main Indonesian island of Java. Y-chromosome and mitochondrial DNA (mtDNA) markers were... Abstract Christmas Island is a remote Australian territory located close to the main Indonesian island of Java. Y‐chromosome and mitochondrial DNA (mtDNA)... |
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SubjectTerms | Asian Continental Ancestry Group - genetics Australia Chromosomes Chromosomes, Human, Y - genetics Community contemporary population DNA DNA, Mitochondrial - genetics Empirical research Generalities genetic variation Genetics Genetics, Population Humans Masculinity Organisation and history of research Physical anthropology Prehistory and protohistory Social isolation Southeast Asia southern China |
Title | Y-chromosome and mitochondrial DNA studies on the population structure of the Christmas Island community |
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