Bacterial diversity associated with the Brazilian endemic reef coral Mussismilia braziliensis
We performed the first characterization of the microbiota associated with the reef coral Mussismilia braziliensis by means of a culture-independent approach. The main groups were Proteobacteria, Cyanobacteria and unclassified bacteria according to the 16S rDNA libraries. Most of the sequences of the...
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Published in | Journal of applied microbiology Vol. 106; no. 4; pp. 1378 - 1387 |
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Main Authors | , , , , , , , |
Format | Journal Article |
Language | English |
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Oxford, UK
Oxford, UK : Blackwell Publishing Ltd
01.04.2009
Blackwell Publishing Ltd Blackwell |
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Abstract | We performed the first characterization of the microbiota associated with the reef coral Mussismilia braziliensis by means of a culture-independent approach. The main groups were Proteobacteria, Cyanobacteria and unclassified bacteria according to the 16S rDNA libraries. Most of the sequences of the mucus of healthy and diseased M. braziliensis did not find close matches in GenBank (i.e. >97% 16S rDNA similarity). Most of the sequences of seawater and mucus of healthy coral fell into tight clusters (17 and 15 clusters respectively). In contrast, most of the sequences of mucus of diseased coral did not form clusters. The rarefaction curves indicate saturation in the recovery of higher taxa (approximately 40 phyla). However, the number of species in the coral mucus (n = 130-170) and seawater (n = 170) did not reach a plateau. The coral microbiota encompasses several potentially novel species and higher taxa. The microbiota of M. braziliensis appears to be species-specific. Diseased coral may have provided a suitable place for colonization by opportunistic bacteria, resulting in a greater bacterial diversity. The first study on the diversity of the microbiota of the endemic and endangered of extinction coral M. braziliensis. |
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AbstractList | We performed the first characterization of the microbiota associated with the reef coral Mussismilia braziliensis by means of a culture-independent approach. The main groups were Proteobacteria, Cyanobacteria and unclassified bacteria according to the 16S rDNA libraries. Most of the sequences of the mucus of healthy and diseased M. braziliensis did not find close matches in GenBank (i.e. >97% 16S rDNA similarity). Most of the sequences of seawater and mucus of healthy coral fell into tight clusters (17 and 15 clusters respectively). In contrast, most of the sequences of mucus of diseased coral did not form clusters. The rarefaction curves indicate saturation in the recovery of higher taxa (approximately 40 phyla). However, the number of species in the coral mucus (n = 130-170) and seawater (n = 170) did not reach a plateau. The coral microbiota encompasses several potentially novel species and higher taxa. The microbiota of M. braziliensis appears to be species-specific. Diseased coral may have provided a suitable place for colonization by opportunistic bacteria, resulting in a greater bacterial diversity. The first study on the diversity of the microbiota of the endemic and endangered of extinction coral M. braziliensis. AbstractAims:We performed the first characterization of the microbiota associated with the reef coral Mussismilia braziliensis by means of a culture-independent approach.Methods and Results:The main groups were Proteobacteria, Cyanobacteria and unclassified bacteria according to the 16S rDNA libraries. Most of the sequences of the mucus of healthy and diseased M. braziliensis did not find close matches in GenBank (i.e. >97% 16S rDNA similarity). Most of the sequences of seawater and mucus of healthy coral fell into tight clusters (17 and 15 clusters respectively). In contrast, most of the sequences of mucus of diseased coral did not form clusters. The rarefaction curves indicate saturation in the recovery of higher taxa (approximately 40 phyla). However, the number of species in the coral mucus (n=130-170) and seawater (n=170) did not reach a plateau.Conclusions:The coral microbiota encompasses several potentially novel species and higher taxa. The microbiota of M. braziliensis appears to be species-specific. Diseased coral may have provided a suitable place for colonization by opportunistic bacteria, resulting in a greater bacterial diversity.Significance and Impact of the Study:The first study on the diversity of the microbiota of the endemic and endangered of extinction coral M. braziliensis. AIMSWe performed the first characterization of the microbiota associated with the reef coral Mussismilia braziliensis by means of a culture-independent approach.METHODS AND RESULTSThe main groups were Proteobacteria, Cyanobacteria and unclassified bacteria according to the 16S rDNA libraries. Most of the sequences of the mucus of healthy and diseased M. braziliensis did not find close matches in GenBank (i.e. >97% 16S rDNA similarity). Most of the sequences of seawater and mucus of healthy coral fell into tight clusters (17 and 15 clusters respectively). In contrast, most of the sequences of mucus of diseased coral did not form clusters. The rarefaction curves indicate saturation in the recovery of higher taxa (approximately 40 phyla). However, the number of species in the coral mucus (n = 130-170) and seawater (n = 170) did not reach a plateau.CONCLUSIONSThe coral microbiota encompasses several potentially novel species and higher taxa. The microbiota of M. braziliensis appears to be species-specific. Diseased coral may have provided a suitable place for colonization by opportunistic bacteria, resulting in a greater bacterial diversity.SIGNIFICANCE AND IMPACT OF THE STUDYThe first study on the diversity of the microbiota of the endemic and endangered of extinction coral M. braziliensis. Aims: We performed the first characterization of the microbiota associated with the reef coral Mussismilia braziliensis by means of a culture‐independent approach. Methods and Results: The main groups were Proteobacteria, Cyanobacteria and unclassified bacteria according to the 16S rDNA libraries. Most of the sequences of the mucus of healthy and diseased M. braziliensis did not find close matches in GenBank (i.e. >97% 16S rDNA similarity). Most of the sequences of seawater and mucus of healthy coral fell into tight clusters (17 and 15 clusters respectively). In contrast, most of the sequences of mucus of diseased coral did not form clusters. The rarefaction curves indicate saturation in the recovery of higher taxa (approximately 40 phyla). However, the number of species in the coral mucus (n = 130–170) and seawater (n = 170) did not reach a plateau. Conclusions: The coral microbiota encompasses several potentially novel species and higher taxa. The microbiota of M. braziliensis appears to be species‐specific. Diseased coral may have provided a suitable place for colonization by opportunistic bacteria, resulting in a greater bacterial diversity. Significance and Impact of the Study: The first study on the diversity of the microbiota of the endemic and endangered of extinction coral M. braziliensis. We performed the first characterization of the microbiota associated with the reef coral Mussismilia braziliensis by means of a culture-independent approach. The main groups were Proteobacteria, Cyanobacteria and unclassified bacteria according to the 16S rDNA libraries. Most of the sequences of the mucus of healthy and diseased M. braziliensis did not find close matches in GenBank (i.e. >97% 16S rDNA similarity). Most of the sequences of seawater and mucus of healthy coral fell into tight clusters (17 and 15 clusters respectively). In contrast, most of the sequences of mucus of diseased coral did not form clusters. The rarefaction curves indicate saturation in the recovery of higher taxa (approximately 40 phyla). However, the number of species in the coral mucus (n = 130-170) and seawater (n = 170) did not reach a plateau. The coral microbiota encompasses several potentially novel species and higher taxa. The microbiota of M. braziliensis appears to be species-specific. Diseased coral may have provided a suitable place for colonization by opportunistic bacteria, resulting in a greater bacterial diversity. The first study on the diversity of the microbiota of the endemic and endangered of extinction coral M. braziliensis. |
Author | Pappas Jr, G Reis, A.M.M Araújo Jr, S.D Thompson, F.L Coelho, A.M.A Francini-Filho, R.B Krüger, R.H Moura, R.L |
Author_xml | – sequence: 1 fullname: Reis, A.M.M – sequence: 2 fullname: Araújo Jr, S.D – sequence: 3 fullname: Moura, R.L – sequence: 4 fullname: Francini-Filho, R.B – sequence: 5 fullname: Pappas Jr, G – sequence: 6 fullname: Coelho, A.M.A – sequence: 7 fullname: Krüger, R.H – sequence: 8 fullname: Thompson, F.L |
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Keywords | Applied microbiology Health Ribosomal DNA Diversity Coral reef Mussismilia braziliensis coral health 16S rDNA Coral 16S-RNA Bacteria Microorganism microbial diversity |
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SubjectTerms | 16S rDNA Animals Anthozoa - microbiology Atlantic Ocean bacteria Bacteria - classification Bacteria - genetics Biodiversity Biological and medical sciences Brazil coral health Cyanobacteria DNA, Bacterial - genetics Ecosystem Fundamental and applied biological sciences. Psychology Gene Library Marine microbial diversity Microbiology Molecular Sequence Data Mussismilia braziliensis Proteobacteria Proteobacteria - classification Proteobacteria - genetics RNA, Ribosomal, 16S - genetics Seawater - microbiology Sequence Analysis, DNA |
Title | Bacterial diversity associated with the Brazilian endemic reef coral Mussismilia braziliensis |
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