Linking sporadic hospital clusters during a community surge of the severe acute respiratory coronavirus virus 2 (SARS-CoV-2) B.1.617.2 delta variant: The utility of whole-genome sequencing

Sporadic clusters of healthcare-associated coronavirus disease 2019 (COVID-19) occurred despite intense rostered routine surveillance and a highly vaccinated healthcare worker (HCW) population, during a community surge of the severe acute respiratory coronavirus virus 2 (SARS-CoV-2) B.1.617.2 δ (del...

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Published inInfection control and hospital epidemiology Vol. 44; no. 6; pp. 1014 - 1018
Main Authors Wee, Liang En, Ko, Karrie Kwan-Ki, Conceicao, Edwin Philip, Sim, Jean Xiang-Ying, Rahman, Nurdyana Abdul, Tan, Shireen Yan-Ling, Cao, Delphine Yan-Hong, Chan, Kenneth Xing-Long, Aung, May Kyawt, Aung, Myat Oo, Yong, Yang, Arora, Shalvi, How, Molly Kue Bien, Tan, Kwee Yuen, Lee, Lai Chee, Tan, Thuan Tong, Wijaya, Limin, Sim, James Heng Chiak, Suphavilai, Chayaporn, Venkatachalam, Indumathi, Ling, Moi Lin
Format Journal Article
LanguageEnglish
Published New York, USA Cambridge University Press 01.06.2023
Subjects
Antigens
Asymptomatic
Concise Communication
Contact tracing
COVID-19
Disease transmission
Epidemics
Genomes
Health care
Infections
Kidney transplants
Patients
Pharmacy
Prevention
Severe acute respiratory syndrome coronavirus 2
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Abstract Sporadic clusters of healthcare-associated coronavirus disease 2019 (COVID-19) occurred despite intense rostered routine surveillance and a highly vaccinated healthcare worker (HCW) population, during a community surge of the severe acute respiratory coronavirus virus 2 (SARS-CoV-2) B.1.617.2 δ (delta) variant. Genomic analysis facilitated timely cluster detection and uncovered additional linkages via HCWs moving between clinical areas and among HCWs sharing a common lunch area, enabling early intervention.
AbstractList Sporadic clusters of healthcare-associated coronavirus disease 2019 (COVID-19) occurred despite intense rostered routine surveillance and a highly vaccinated healthcare worker (HCW) population, during a community surge of the severe acute respiratory coronavirus virus 2 (SARS-CoV-2) B.1.617.2 δ (delta) variant. Genomic analysis facilitated timely cluster detection and uncovered additional linkages via HCWs moving between clinical areas and among HCWs sharing a common lunch area, enabling early intervention.
Author Sim, James Heng Chiak
Sim, Jean Xiang-Ying
Cao, Delphine Yan-Hong
Arora, Shalvi
How, Molly Kue Bien
Tan, Thuan Tong
Venkatachalam, Indumathi
Wee, Liang En
Tan, Shireen Yan-Ling
Aung, May Kyawt
Wijaya, Limin
Ling, Moi Lin
Ko, Karrie Kwan-Ki
Conceicao, Edwin Philip
Aung, Myat Oo
Tan, Kwee Yuen
Chan, Kenneth Xing-Long
Lee, Lai Chee
Suphavilai, Chayaporn
Rahman, Nurdyana Abdul
Yong, Yang
AuthorAffiliation 4 Genome Institute of Singapore , ASTAR, Singapore , Singapore
1 Department of Infectious Diseases, Singapore General Hospital , Singapore , Singapore
3 Department of Microbiology, Singapore General Hospital , Singapore , Singapore
6 Department of Infection Prevention and Epidemiology, Singapore General Hospital , Singapore , Singapore
5 Duke–NUS Medical School , Singapore , Singapore
2 Department of Molecular Pathology, Singapore General Hospital , Singapore , Singapore
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CitedBy_id crossref_primary_10_1002_jmv_28442
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Cites_doi 10.1017/ice.2020.207
10.3389/fmed.2021.790662
10.1017/ice.2021.366
10.1093/cid/ciab100
10.1016/j.jinf.2021.07.034
10.2807/1560-7917.ES.2021.26.30.2100636
10.1017/ice.2021.268
10.1017/ice.2020.1222
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The Author(s), 2022. Published by Cambridge University Press on behalf of The Society for Healthcare Epidemiology of America. This work is licensed under the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
The Author(s) 2022 2022 The Author(s)
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Snippet Sporadic clusters of healthcare-associated coronavirus disease 2019 (COVID-19) occurred despite intense rostered routine surveillance and a highly vaccinated...
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SubjectTerms Antigens
Asymptomatic
Concise Communication
Contact tracing
COVID-19
Disease transmission
Epidemics
Genomes
Health care
Infections
Kidney transplants
Patients
Pharmacy
Prevention
Severe acute respiratory syndrome coronavirus 2
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Title Linking sporadic hospital clusters during a community surge of the severe acute respiratory coronavirus virus 2 (SARS-CoV-2) B.1.617.2 delta variant: The utility of whole-genome sequencing
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https://pubmed.ncbi.nlm.nih.gov/PMC10262163
Volume 44
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