Quantitative elemental imaging in eukaryotic algae

Abstract All organisms, fundamentally, are made from the same raw material, namely the elements of the periodic table. Biochemical diversity is achieved by how these elements are utilized, for what purpose, and in which physical location. Determining elemental distributions, especially those of trac...

Full description

Saved in:
Bibliographic Details
Published inMetallomics Vol. 15; no. 5
Main Authors Schmollinger, Stefan, Chen, Si, Merchant, Sabeeha S
Format Journal Article
LanguageEnglish
Published England Oxford University Press 02.05.2023
Subjects
Online AccessGet full text

Cover

Loading…
Abstract Abstract All organisms, fundamentally, are made from the same raw material, namely the elements of the periodic table. Biochemical diversity is achieved by how these elements are utilized, for what purpose, and in which physical location. Determining elemental distributions, especially those of trace elements that facilitate metabolism as cofactors in the active centers of essential enzymes, can determine the state of metabolism, the nutritional status, or the developmental stage of an organism. Photosynthetic eukaryotes, especially algae, are excellent subjects for quantitative analysis of elemental distribution. These microbes utilize unique metabolic pathways that require various trace nutrients at their core to enable their operation. Photosynthetic microbes also have important environmental roles as primary producers in habitats with limited nutrient supplies or toxin contaminations. Accordingly, photosynthetic eukaryotes are of great interest for biotechnological exploitation, carbon sequestration, and bioremediation, with many of the applications involving various trace elements and consequently affecting their quota and intracellular distribution. A number of diverse applications were developed for elemental imaging, allowing subcellular resolution, with X-ray fluorescence microscopy (XFM, XRF) being at the forefront, enabling quantitative descriptions of intact cells in a non-destructive method. This Tutorial Review summarizes the workflow of a quantitative, single-cell elemental distribution analysis of a eukaryotic alga using XFM. Graphical Abstract Graphical Abstract Elemental imaging of a single-celled eukaryotic alga using X-ray fluorescence.
AbstractList Abstract All organisms, fundamentally, are made from the same raw material, namely the elements of the periodic table. Biochemical diversity is achieved by how these elements are utilized, for what purpose, and in which physical location. Determining elemental distributions, especially those of trace elements that facilitate metabolism as cofactors in the active centers of essential enzymes, can determine the state of metabolism, the nutritional status, or the developmental stage of an organism. Photosynthetic eukaryotes, especially algae, are excellent subjects for quantitative analysis of elemental distribution. These microbes utilize unique metabolic pathways that require various trace nutrients at their core to enable their operation. Photosynthetic microbes also have important environmental roles as primary producers in habitats with limited nutrient supplies or toxin contaminations. Accordingly, photosynthetic eukaryotes are of great interest for biotechnological exploitation, carbon sequestration, and bioremediation, with many of the applications involving various trace elements and consequently affecting their quota and intracellular distribution. A number of diverse applications were developed for elemental imaging, allowing subcellular resolution, with X-ray fluorescence microscopy (XFM, XRF) being at the forefront, enabling quantitative descriptions of intact cells in a non-destructive method. This Tutorial Review summarizes the workflow of a quantitative, single-cell elemental distribution analysis of a eukaryotic alga using XFM. Graphical Abstract Graphical Abstract Elemental imaging of a single-celled eukaryotic alga using X-ray fluorescence.
All organisms, fundamentally, are made from the same raw material, namely the elements of the periodic table. Biochemical diversity is achieved by how these elements are utilized, for what purpose, and in which physical location. Determining elemental distributions, especially those of trace elements that facilitate metabolism as cofactors in the active centers of essential enzymes, can determine the state of metabolism, the nutritional status, or the developmental stage of an organism. Photosynthetic eukaryotes, especially algae, are excellent subjects for quantitative analysis of elemental distribution. These microbes utilize unique metabolic pathways that require various trace nutrients at their core to enable their operation. Photosynthetic microbes also have important environmental roles as primary producers in habitats with limited nutrient supplies or toxin contaminations. Accordingly, photosynthetic eukaryotes are of great interest for biotechnological exploitation, carbon sequestration, and bioremediation, with many of the applications involving various trace elements and consequently affecting their quota and intracellular distribution. A number of diverse applications were developed for elemental imaging, allowing subcellular resolution, with X-ray fluorescence microscopy (XFM, XRF) being at the forefront, enabling quantitative descriptions of intact cells in a non-destructive method. This Tutorial Review summarizes the workflow of a quantitative, single-cell elemental distribution analysis of a eukaryotic alga using XFM.
Author Schmollinger, Stefan
Chen, Si
Merchant, Sabeeha S
Author_xml – sequence: 1
  givenname: Stefan
  orcidid: 0000-0002-7487-8014
  surname: Schmollinger
  fullname: Schmollinger, Stefan
  email: schmolli@msu.edu
– sequence: 2
  givenname: Si
  orcidid: 0000-0001-6619-2699
  surname: Chen
  fullname: Chen, Si
– sequence: 3
  givenname: Sabeeha S
  orcidid: 0000-0002-2594-509X
  surname: Merchant
  fullname: Merchant, Sabeeha S
BackLink https://www.ncbi.nlm.nih.gov/pubmed/37186252$$D View this record in MEDLINE/PubMed
BookMark eNo9kEtLxDAYRYMozkO3LqVbF53Js2mXMviCgUFQcFe-pEmJNmlpU2H-vZWOru7iHi6Xs0LnoQ0GoRuCNwQXbOtj6_Ww9RYqTMUZWhIpslQU5GOBVsPwiXHGMRaXaMEkyTMq6BLR1xFCdBGi-zaJaYw3IUKTOA-1C3XiQmLGL-iPbXQ6gaYGc4UuLDSDuT7lGr0_PrztntP94elld79PNRc0psIyDoWWklvFMyszywwopY2mOZc5wwKKwgIFy4SgE6eUBDIBOde0qhhbo9t5txuVN1XZ9dOp_lj-nZ-Auxlox-6_Jbj8lVHOMsqTDPYDL-NW3g
CitedBy_id crossref_primary_10_1007_s11120_024_01103_8
crossref_primary_10_1039_D3JA00292F
ContentType Journal Article
Copyright The Author(s) 2023. Published by Oxford University Press. 2023
The Author(s) 2023. Published by Oxford University Press.
Copyright_xml – notice: The Author(s) 2023. Published by Oxford University Press. 2023
– notice: The Author(s) 2023. Published by Oxford University Press.
DBID TOX
CGR
CUY
CVF
ECM
EIF
NPM
DOI 10.1093/mtomcs/mfad025
DatabaseName Oxford Journals Open Access Collection
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
DatabaseTitle MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
DatabaseTitleList
MEDLINE
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
– sequence: 3
  dbid: TOX
  name: Oxford Journals Open Access Collection
  url: https://academic.oup.com/journals/
  sourceTypes: Publisher
DeliveryMethod fulltext_linktorsrc
Discipline Anatomy & Physiology
EISSN 1756-591X
ExternalDocumentID 37186252
10.1093/mtomcs/mfad025
Genre Research Support, U.S. Gov't, Non-P.H.S
Journal Article
Research Support, N.I.H., Extramural
GrantInformation_xml – fundername: NIGMS NIH HHS
  grantid: R37 GM042143
– fundername: NIGMS NIH HHS
  grantid: R01 GM042143
GroupedDBID ---
-JG
0-7
0R~
123
29M
4.4
53G
5WD
705
7~J
AAEMU
AAIWI
AAJAE
AANOJ
AAPXW
AARHZ
AASNB
AAUAY
AAVAP
AAWGC
ABDVN
ABEMK
ABJNI
ABMNT
ABPQP
ABPTD
ABRYZ
ABWST
ABXOH
ABXVV
ACGFS
ACIWK
ACLDK
ACPRK
ADGKP
ADIPN
ADMRA
ADQBN
ADSRN
ADVEK
AEFDR
AENEX
AESAV
AFFZL
AFGWE
AFLYV
AFRAH
AFVBQ
AGQXC
AGSTE
AHGCF
AHGXI
AJEEA
ALMA_UNASSIGNED_HOLDINGS
ANBJS
ANLMG
ANUXI
APEMP
ASKNT
ASPBG
ATGXG
AUDPV
AUNWK
AVWKF
AZFZN
BCRHZ
BEYMZ
BSQNT
C6K
CAG
COF
DU5
EBS
EE0
EF-
EJD
F5P
FEDTE
FLUFQ
FOEOM
H13
HVGLF
HZ~
H~N
J3G
J3H
J3I
KBUDW
KOP
KSI
KSN
L-8
N9A
NOMLY
O-G
O9-
OBOKY
OJZSN
OK1
R56
RCNCU
RNS
ROX
ROYLF
RPMJG
RRC
RSCEA
SMJ
TOX
UCJ
VUG
ABDFA
ABEJV
ABGNP
ABVGC
CGR
CUY
CVF
ECM
EIF
NPM
OWPYF
ID FETCH-LOGICAL-c452t-5f34a9c774fb46f76f3eabbcec28478305a99fa2af3552c77bb7a1bbc84c2dd33
IEDL.DBID TOX
IngestDate Wed Feb 19 02:05:39 EST 2025
Wed Aug 28 03:17:25 EDT 2024
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 5
Keywords heavy metal detoxification
iron
copper
XRF
SXRF
Chlamydomonas
Language English
License This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
The Author(s) 2023. Published by Oxford University Press.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c452t-5f34a9c774fb46f76f3eabbcec28478305a99fa2af3552c77bb7a1bbc84c2dd33
ORCID 0000-0001-6619-2699
0000-0002-2594-509X
0000-0002-7487-8014
OpenAccessLink https://dx.doi.org/10.1093/mtomcs/mfad025
PMID 37186252
ParticipantIDs pubmed_primary_37186252
oup_primary_10_1093_mtomcs_mfad025
PublicationCentury 2000
PublicationDate 2023-05-02
PublicationDateYYYYMMDD 2023-05-02
PublicationDate_xml – month: 05
  year: 2023
  text: 2023-05-02
  day: 02
PublicationDecade 2020
PublicationPlace England
PublicationPlace_xml – name: England
PublicationTitle Metallomics
PublicationTitleAlternate Metallomics
PublicationYear 2023
Publisher Oxford University Press
Publisher_xml – name: Oxford University Press
SSID ssj0064005
Score 2.3467352
SecondaryResourceType review_article
Snippet Abstract All organisms, fundamentally, are made from the same raw material, namely the elements of the periodic table. Biochemical diversity is achieved by how...
All organisms, fundamentally, are made from the same raw material, namely the elements of the periodic table. Biochemical diversity is achieved by how these...
SourceID pubmed
oup
SourceType Index Database
Publisher
SubjectTerms Eukaryota - metabolism
Eukaryotic Cells - metabolism
Humans
Microscopy
Plants - metabolism
Trace Elements - metabolism
Title Quantitative elemental imaging in eukaryotic algae
URI https://www.ncbi.nlm.nih.gov/pubmed/37186252
Volume 15
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwjV1LSwMxEB60Jy-i1kd9lCDibalNsunmWMRShFaFFva2JNkEiu5uabeH_ntns9uC4kFynQQySeabmcwD4CGNHJOVo0pF1AScWxHIJ2EChmhtqUKbi1bZyJOpGM_5axzGTbHo9R9f-JL1srLIzLqXOZUiQKO0RQSuquTP3uKdzBV4E8N9ScbfU3a5az_0Ro8foxM4bhQ_MqxP6hQObH4G7WGORm-2JY_Eh2J6H3cb6MdG5T77C2URsU2E9xdZZL6nEFnkxG4-1Wpb4GKkysaw5zAfvcyex0HT3CAwPKRlEDrGlTSofTnNhRsIx6zS2lhTAUaEz1BJ6RRVDjUCinRaD1QfCSJuaJoydgGtvMjtFZAodQNtKFOCGi6Zkq6fammYwCG5sR24x_0ny7p8RVJ_O7OkZlLSMKkDlzV79nQMYQutI3r9n-k3cFQ1YvehgPQWWuVqY-8QrkvdhcPp-6Trz-sbdw6W-w
linkProvider Oxford University Press
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Quantitative+elemental+imaging+in+eukaryotic+algae&rft.jtitle=Metallomics&rft.au=Schmollinger%2C+Stefan&rft.au=Chen%2C+Si&rft.au=Merchant%2C+Sabeeha+S&rft.date=2023-05-02&rft.pub=Oxford+University+Press&rft.eissn=1756-591X&rft.volume=15&rft.issue=5&rft_id=info:doi/10.1093%2Fmtomcs%2Fmfad025&rft.externalDocID=10.1093%2Fmtomcs%2Fmfad025