Multiple genotypes of enterovirus G carrying a papain-like cysteine protease (PL-CP) sequence circulating on two pig farms in Japan: first identification of enterovirus G10 carrying a PL-CP sequence
Two and three genotypes of enterovirus G (EV-G) carrying a papain-like cysteine protease (PL-CP) sequence were detected on two pig farms and classified into genotypes G1 and G10, and G1, G8, and G17, respectively, based on VP1 sequences. A G10 EV-G virus bearing a PL-CP sequence was detected for the...
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Published in | Archives of virology Vol. 165; no. 12; pp. 2909 - 2914 |
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Main Authors | , , , , , , , , , , , , |
Format | Journal Article |
Language | English |
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Vienna
Springer Vienna
01.12.2020
Springer Nature B.V |
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Abstract | Two and three genotypes of enterovirus G (EV-G) carrying a papain-like cysteine protease (PL-CP) sequence were detected on two pig farms and classified into genotypes G1 and G10, and G1, G8, and G17, respectively, based on VP1 sequences. A G10 EV-G virus bearing a PL-CP sequence was detected for the first time. Phylogenetic analysis of the P2 and P3 regions grouped the viruses by farm with high sequence similarity. Furthermore, clear recombination break points were detected in the 2A region, suggesting that PL-CP EV-G-containing strains gained sequence diversity through recombination events among the multiple circulating EV-G genotypes on the farms. |
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AbstractList | Two and three genotypes of enterovirus G (EV-G) carrying a papain-like cysteine protease (PL-CP) sequence were detected on two pig farms and classified into genotypes G1 and G10, and G1, G8, and G17, respectively, based on VP1 sequences. A G10 EV-G virus bearing a PL-CP sequence was detected for the first time. Phylogenetic analysis of the P2 and P3 regions grouped the viruses by farm with high sequence similarity. Furthermore, clear recombination break points were detected in the 2A region, suggesting that PL-CP EV-G-containing strains gained sequence diversity through recombination events among the multiple circulating EV-G genotypes on the farms. Two and three genotypes of enterovirus G (EV-G) carrying a papain-like cysteine protease (PL-CP) sequence were detected on two pig farms and classified into genotypes G1 and G10, and G1, G8, and G17, respectively, based on VP1 sequences. A G10 EV-G virus bearing a PL-CP sequence was detected for the first time. Phylogenetic analysis of the P2 and P3 regions grouped the viruses by farm with high sequence similarity. Furthermore, clear recombination break points were detected in the 2A region, suggesting that PL-CP EV-G-containing strains gained sequence diversity through recombination events among the multiple circulating EV-G genotypes on the farms.Two and three genotypes of enterovirus G (EV-G) carrying a papain-like cysteine protease (PL-CP) sequence were detected on two pig farms and classified into genotypes G1 and G10, and G1, G8, and G17, respectively, based on VP1 sequences. A G10 EV-G virus bearing a PL-CP sequence was detected for the first time. Phylogenetic analysis of the P2 and P3 regions grouped the viruses by farm with high sequence similarity. Furthermore, clear recombination break points were detected in the 2A region, suggesting that PL-CP EV-G-containing strains gained sequence diversity through recombination events among the multiple circulating EV-G genotypes on the farms. |
Author | Imai, Ryo Madarame, Hiroo Sekiguchi, Yuya Sunaga, Fujiko Oi, Toru Mizutani, Tetsuya Nagai, Makoto Nagata, Ayaka Misawa, Naoaki Katayama, Yukie Okabayashi, Tamaki Oba, Mami Oka, Tomoichiro |
Author_xml | – sequence: 1 givenname: Yuya surname: Sekiguchi fullname: Sekiguchi, Yuya organization: School of Veterinary Medicine, Azabu University – sequence: 2 givenname: Ayaka surname: Nagata fullname: Nagata, Ayaka organization: School of Veterinary Medicine, Azabu University – sequence: 3 givenname: Fujiko surname: Sunaga fullname: Sunaga, Fujiko organization: School of Veterinary Medicine, Azabu University – sequence: 4 givenname: Toru surname: Oi fullname: Oi, Toru organization: Faculty of Bioresources and Environmental Science, Ishikawa Prefectural University – sequence: 5 givenname: Ryo surname: Imai fullname: Imai, Ryo organization: Research and Education Center for Prevention of Global Infectious Disease of Animals, Tokyo University of Agriculture and Technology – sequence: 6 givenname: Hiroo surname: Madarame fullname: Madarame, Hiroo organization: School of Veterinary Medicine, Azabu University – sequence: 7 givenname: Yukie surname: Katayama fullname: Katayama, Yukie organization: Research and Education Center for Prevention of Global Infectious Disease of Animals, Tokyo University of Agriculture and Technology – sequence: 8 givenname: Mami surname: Oba fullname: Oba, Mami organization: Research and Education Center for Prevention of Global Infectious Disease of Animals, Tokyo University of Agriculture and Technology – sequence: 9 givenname: Tamaki surname: Okabayashi fullname: Okabayashi, Tamaki organization: Center for Animal Disease Control, University of Miyazaki – sequence: 10 givenname: Naoaki surname: Misawa fullname: Misawa, Naoaki organization: Center for Animal Disease Control, University of Miyazaki – sequence: 11 givenname: Tomoichiro surname: Oka fullname: Oka, Tomoichiro organization: Department of Virology II, National Institute of Infectious Diseases – sequence: 12 givenname: Tetsuya surname: Mizutani fullname: Mizutani, Tetsuya email: tmizutan@cc.tuat.ac.jp organization: Research and Education Center for Prevention of Global Infectious Disease of Animals, Tokyo University of Agriculture and Technology – sequence: 13 givenname: Makoto orcidid: 0000-0001-5884-620X surname: Nagai fullname: Nagai, Makoto email: m-nagai@azabu-u.ac.jp, m-nagai@cc.tuat.ac.jp organization: School of Veterinary Medicine, Azabu University, Research and Education Center for Prevention of Global Infectious Disease of Animals, Tokyo University of Agriculture and Technology |
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CitedBy_id | crossref_primary_10_3389_fvets_2024_1431180 crossref_primary_10_3390_v15081747 crossref_primary_10_1186_s12917_021_02988_6 crossref_primary_10_1292_jvms_22_0505 |
Cites_doi | 10.1007/s00705-017-3612-x 10.1002/rmv.457 10.1007/s00705-013-1634-6 10.1099/jgv.0.000911 10.1128/JVI.00450-17 10.1007/s11262-017-1481-8 10.1099/vir.0.81264-0 10.1128/JVI.78.6.2948-2955.2004 10.1007/s11262-014-1152-y 10.1136/vr.122.18.441 10.1128/JVI.00083-07 10.1099/vir.0.82146-0 10.1371/journal.pone.0190819 10.1128/JVI.80.1.483-493.2006 10.1186/1743-422X-10-99 10.1093/molbev/msy096 10.1371/journal.ppat.1005266 10.1002/rmv.663 10.1016/j.meegid.2012 10.1128/JVI.73.1.152-160.1999 10.1111/tbed.13073 10.1128/JVI.00180-07 10.1016/j.virol.2018.10.006 10.1099/jgv.0.000799 10.1007/s00705-015-2543-7 10.1371/journal.pone.0015300 10.1093/ve/vev003 10.1099/jgv.0.001446 10.1099/vir.0.008540-0 10.1016/j.chom.2016.03.009 10.1007/s00705-017-3600-1 10.1016/j.meegid.2019.103975 10.1099/vir.0.061978-0 10.1007/s00705-018-3875-x 10.1093/ve/vex024 10.1099/jgv.0.000366 |
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References | Xiao, Rouzine, Bianco, Acevedo, Goldstein, Farkov, Brodsky, Andino (CR30) 2016; 19 Lee, Lee (CR13) 2019; 66 Martin, Murrell, Golden, Khoosal, Muhire (CR22) 2015; 1 Savolainen-Kopra, Blomqvist (CR28) 2010; 20 Shang, Misra, Hause, Fang (CR10) 2017; 91 Bouslama, Nasri, Chollet, Belguith, Bourlet, Aouni, Pozzetto, Pillet (CR31) 2007; 81 Brown, Maher, Flemister, Naraghi-Arani, Uddin, Oberste, Pallansch (CR3) 2009; 90 CR12 McIntyre, Savolainen-Kopra, Hovi, Simmonds (CR25) 2013; 158 CR11 Bunke, Receveur, Oeser, Fickenscher, Zell, Krumbholz (CR14) 2018; 163 Tsuchiaka, Naoi, Imai, Masuda, Ito, Akagami, Ouchi, Ishii, Sakaguchi, Omatsu, Katayama, Oba, Shirai, Satani, Takashima, Taniguchi, Takasu, Madarame, Sunaga, Aoki, Makino, Mizutani, Nagai (CR15) 2018; 13 Tapparel, Siegrist, Petty, Kaiser (CR4) 2013; 14 Nikolaidis, Mimouli, Kyriakopoulou, Tsimpidis, Tsakogiannis, Markoulatos, Amoutzias (CR33) 2019; 526 Zhang, Zhu, Yan, Liu, Bai, Wang, Chen, Zhu, An, Kew, Xu (CR32) 2010; 5 Kyriakopoulou, Pliaka, Amoutzias, Markoulatos (CR35) 2015; 50 Yang, Wang, Shen, Zhang, Hua (CR8) 2013; 28 Nagata, Sekiguchi, Oi, Sunaga, Madarame, Imai, Sano, Katayama, Omatsu, Oba, Furuya, Shirai, Okabayashi, Misawa, Oka, Mizutani, Nagai (CR17) 2020; 101 Knowles (CR7) 1988; 122 Lole, Bollinger, Paranjape, Gadkari, Kulkarni, Novak, Ingersoll, Sheppard, Ray (CR21) 1999; 73 Knutson, Velayudhan, Marthaler (CR9) 2017; 98 CR2 Lukashev, Lashkevich, Ivanova, Koroleva, Hinkkanen, Ilonen (CR24) 2005; 86 Simmonds, Welch (CR29) 2006; 80 Kyriakopoulou, Amoutzias, Dimitriou, Tsakogiannis, Mossialos, Markoulatos (CR34) 2017 Nora, Charpentier, Tenaillon, Hoede, Clavel, Hance (CR26) 2007; 81 Kumar, Stecher, Li, Knyaz, Tamura (CR19) 2018; 35 CR6 CR5 Muslin, Joffret, Pelletier, Blondel, Delpeyroux (CR37) 2015; 11 Imai, Nagai, Oba, Sakaguchi, Ujike, Kimura, Kida, Masuda, Kuroda, Wen, Li, Katayama, Naoi, Tsuchiaka, Omatsu, Yamazato, Makino, Mizutani (CR16) 2019; 75 Nagai, Omatsu, Aoki, Otomaru, Uto, Koizumi, Minami-Fukuda, Takai, Murakami, Masuda, Yamasato, Shiokawa, Tsuchiaka, Naoi, Sano, Okazaki, Katayama, Oba, Furuya, Shirai, Mizutani (CR18) 2015; 160 Oka, Doan, Shimoike, Haga, Takizawa (CR20) 2017; 53 Lukashev (CR23) 2005; 15 Oberste, Peñaranda, Pallansch (CR27) 2004; 78 Zell, Delwart, Gorbalenya, Hovi, King, Knowles, Lindberg, Pallansch, Palmenberg, Reuter, Simmonds, Skern, Stanway, Yamashita (CR1) 2017; 98 Mirand, Henquell, Archimbaud, Peigue-Lafeuille, Bailly (CR36) 2007; 88 P Simmonds (4816_CR29) 2006; 80 Y Zhang (4816_CR32) 2010; 5 M Nagai (4816_CR18) 2015; 160 R Zell (4816_CR1) 2017; 98 J Bunke (4816_CR14) 2018; 163 C Savolainen-Kopra (4816_CR28) 2010; 20 T Oka (4816_CR20) 2017; 53 4816_CR5 4816_CR6 S Tsuchiaka (4816_CR15) 2018; 13 4816_CR2 S Yang (4816_CR8) 2013; 28 A Nagata (4816_CR17) 2020; 101 KS Lole (4816_CR21) 1999; 73 4816_CR11 CL McIntyre (4816_CR25) 2013; 158 S Kumar (4816_CR19) 2018; 35 4816_CR12 M Nikolaidis (4816_CR33) 2019; 526 L Bouslama (4816_CR31) 2007; 81 P Shang (4816_CR10) 2017; 91 R Imai (4816_CR16) 2019; 75 TP Knutson (4816_CR9) 2017; 98 Y Xiao (4816_CR30) 2016; 19 C Tapparel (4816_CR4) 2013; 14 Z Kyriakopoulou (4816_CR35) 2015; 50 MS Oberste (4816_CR27) 2004; 78 S Lee (4816_CR13) 2019; 66 C Muslin (4816_CR37) 2015; 11 BA Brown (4816_CR3) 2009; 90 Z Kyriakopoulou (4816_CR34) 2017 AN Lukashev (4816_CR23) 2005; 15 DP Martin (4816_CR22) 2015; 1 AN Lukashev (4816_CR24) 2005; 86 T Nora (4816_CR26) 2007; 81 NJ Knowles (4816_CR7) 1988; 122 A Mirand (4816_CR36) 2007; 88 |
References_xml | – volume: 163 start-page: 489 year: 2018 end-page: 493 ident: CR14 article-title: High genetic diversity of porcine enterovirus G in Schleswig-Holstein, Germany publication-title: Arch Virol doi: 10.1007/s00705-017-3612-x – volume: 15 start-page: 157 year: 2005 end-page: 167 ident: CR23 article-title: Role of recombination in evolution of enteroviruses publication-title: Rev MedVirol doi: 10.1002/rmv.457 – volume: 158 start-page: 1497 year: 2013 end-page: 1515 ident: CR25 article-title: Recombination in theevolution of human rhinovirus genomes publication-title: Arch Virol doi: 10.1007/s00705-013-1634-6 – volume: 98 start-page: 2421 year: 2017 end-page: 2422 ident: CR1 article-title: ICTV Virus Taxonomy Profile: Picornaviridae publication-title: J Gen Virol doi: 10.1099/jgv.0.000911 – volume: 91 start-page: e00450-17 issue: 14 year: 2017 ident: CR10 article-title: Naturally occurring recombinant enterovirus expresses a torovirus deubiquitinase publication-title: J Virol doi: 10.1128/JVI.00450-17 – ident: CR2 – volume: 53 start-page: 848 year: 2017 end-page: 855 ident: CR20 article-title: First complete genome sequences of genogroup V, genotype 3 porcine sapoviruses: common 5’-terminal genomic feature of sapoviruses publication-title: Virus Genes doi: 10.1007/s11262-017-1481-8 – ident: CR12 – volume: 86 start-page: 3281 year: 2005 end-page: 3290 ident: CR24 article-title: Recombination in circulating Human enterovirus B: independent evolutionof structural and non-structural genome regions publication-title: J Gen Virol doi: 10.1099/vir.0.81264-0 – volume: 78 start-page: 2948 year: 2004 end-page: 2955 ident: CR27 article-title: RNA recombination plays a major role in genomic change during circulation of coxsackie B viruses publication-title: J Virol doi: 10.1128/JVI.78.6.2948-2955.2004 – volume: 50 start-page: 177 year: 2015 end-page: 188 ident: CR35 article-title: Recombination among human non-polio enteroviruses: implications for epidemiology and evolution publication-title: Virus Genes Virus Genes doi: 10.1007/s11262-014-1152-y – ident: CR6 – volume: 122 start-page: 441 year: 1988 end-page: 442 ident: CR7 article-title: The association of group III porcine enteroviruses with epithelial tissue publication-title: Vet Rec doi: 10.1136/vr.122.18.441 – volume: 81 start-page: 7620 year: 2007 end-page: 7628 ident: CR26 article-title: Contribution of recombination to the evolution of human immunodeficiency virusesexpressing resistance to antiretroviral treatment publication-title: J Virol doi: 10.1128/JVI.00083-07 – volume: 88 start-page: 166 year: 2007 end-page: 176 ident: CR36 article-title: Emergence of recent echovirus 30 lineages is marked by serial genetic recombination events publication-title: J Gen Virol. doi: 10.1099/vir.0.82146-0 – volume: 13 start-page: e0190819 year: 2018 ident: CR15 article-title: Genetic diversity and recombination of enterovirus G strains in Japanese pigs: High prevalence of strains carrying a papain-like cysteine protease sequence in the enterovirus G population publication-title: PLoS One doi: 10.1371/journal.pone.0190819 – volume: 80 start-page: 483 year: 2006 end-page: 493 ident: CR29 article-title: Frequency and dynamics of recombination within different species of human enteroviruses publication-title: J Virol. doi: 10.1128/JVI.80.1.483-493.2006 – volume: 28 start-page: 99 issue: 10 year: 2013 ident: CR8 article-title: Prevalence of porcine enterovirus 9 in pigs in middle and eastern China publication-title: Virol J doi: 10.1186/1743-422X-10-99 – volume: 35 start-page: 1547 year: 2018 end-page: 1549 ident: CR19 article-title: MEGA X: molecular evolutionary genetics analysis across computing platforms publication-title: Mol Biol Evol doi: 10.1093/molbev/msy096 – volume: 11 start-page: e1005266 year: 2015 ident: CR37 article-title: Evolution and emergence of enteroviruses through intra- and inter-species recombination: plasticity and phenotypic impact of modular genetic exchanges in the 5’ untranslated region publication-title: PLoS Pathog. doi: 10.1371/journal.ppat.1005266 – volume: 20 start-page: 358 year: 2010 end-page: 371 ident: CR28 article-title: Mechanisms of genetic variation in polio-viruses publication-title: Rev Med Virol doi: 10.1002/rmv.663 – volume: 14 start-page: 282 year: 2013 end-page: 293 ident: CR4 article-title: Picornavirus and enterovirus diversity with associated human diseases publication-title: Infect Genet Evol doi: 10.1016/j.meegid.2012 – volume: 73 start-page: 152 year: 1999 end-page: 160 ident: CR21 article-title: Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination publication-title: J Virol doi: 10.1128/JVI.73.1.152-160.1999 – volume: 66 start-page: 1023 year: 2019 end-page: 1028 ident: CR13 article-title: First detection of novel enterovirus G recombining a torovirus papain-like protease gene associated with diarrhoea in swine in South Korea publication-title: Transbound Emerg Dis doi: 10.1111/tbed.13073 – volume: 81 start-page: 8944 year: 2007 end-page: 8952 ident: CR31 article-title: Natural recombination event within the capsid genomic region leading to a chimeric strain of human enterovirus B publication-title: J Virol. doi: 10.1128/JVI.00180-07 – volume: 526 start-page: 72 year: 2019 end-page: 80 ident: CR33 article-title: Large-scale genomic analysis reveals recurrent patterns of intertypic recombination in human enteroviruses publication-title: Virology doi: 10.1016/j.virol.2018.10.006 – volume: 98 start-page: 1305 year: 2017 end-page: 1310 ident: CR9 article-title: A porcine enterovirus G associated with enteric disease contains a novel papain-like cysteine protease publication-title: J Gen Virol doi: 10.1099/jgv.0.000799 – volume: 160 start-page: 2491 year: 2015 end-page: 2501 ident: CR18 article-title: Full genome analysis of bovine astrovirus from fecal samples of cattle in Japan: identification of possible interspecies transmission of bovine astrovirus publication-title: Arch Virol doi: 10.1007/s00705-015-2543-7 – volume: 5 start-page: e15300 year: 2010 ident: CR32 article-title: Natural type 3/type 2 intertypic vaccine-related poliovirus recombinants with the first crossover sites within the VP1 capsid coding region publication-title: PLoS One doi: 10.1371/journal.pone.0015300 – ident: CR11 – volume: 1 start-page: vev003 issue: 1 year: 2015 ident: CR22 article-title: RDP4: Detection and analysis of recombination patterns in virus genomes publication-title: Virus Evol doi: 10.1093/ve/vev003 – ident: CR5 – volume: 101 start-page: 840 year: 2020 end-page: 852 ident: CR17 article-title: Genetic diversity of Enterovirus G detected in fecal samples of wild boars in Japan: identification of novel genotypes carrying a papain-like cysteine protease sequence publication-title: J Gen Virol doi: 10.1099/jgv.0.001446 – volume: 90 start-page: 1713 year: 2009 end-page: 1723 ident: CR3 article-title: Resolving ambiguities in genetic typing of human enterovirus species C clinical isolates and identification of enterovirus 96, 99 and 102 publication-title: J Gen Virol doi: 10.1099/vir.0.008540-0 – volume: 19 start-page: 493 year: 2016 end-page: 503 ident: CR30 article-title: RNA recombination enhances adaptability and is required for virusspread and virulence publication-title: Cell Host Microbe doi: 10.1016/j.chom.2016.03.009 – year: 2017 ident: CR34 publication-title: Intra- and inter-serotypic recombinations in the 5΄ UTR-VP4 region of Echovirus 30 strains doi: 10.1007/s00705-017-3600-1 – volume: 75 start-page: 103975 year: 2019 ident: CR16 article-title: A novel defective recombinant porcine enterovirus G virus carrying a porcine torovirus papain-like cysteine protease gene and a putative anti-apoptosis gene in place of viral structural protein genes publication-title: Infect Genet Evol doi: 10.1016/j.meegid.2019.103975 – volume: 13 start-page: e0190819 year: 2018 ident: 4816_CR15 publication-title: PLoS One doi: 10.1371/journal.pone.0190819 – volume: 53 start-page: 848 year: 2017 ident: 4816_CR20 publication-title: Virus Genes doi: 10.1007/s11262-017-1481-8 – ident: 4816_CR2 – volume: 80 start-page: 483 year: 2006 ident: 4816_CR29 publication-title: J Virol. doi: 10.1128/JVI.80.1.483-493.2006 – volume: 90 start-page: 1713 year: 2009 ident: 4816_CR3 publication-title: J Gen Virol doi: 10.1099/vir.0.008540-0 – volume: 160 start-page: 2491 year: 2015 ident: 4816_CR18 publication-title: Arch Virol doi: 10.1007/s00705-015-2543-7 – volume-title: Intra- and inter-serotypic recombinations in the 5΄ UTR-VP4 region of Echovirus 30 strains year: 2017 ident: 4816_CR34 doi: 10.1007/s00705-017-3600-1 – volume: 15 start-page: 157 year: 2005 ident: 4816_CR23 publication-title: Rev MedVirol doi: 10.1002/rmv.457 – volume: 11 start-page: e1005266 year: 2015 ident: 4816_CR37 publication-title: PLoS Pathog. doi: 10.1371/journal.ppat.1005266 – volume: 98 start-page: 1305 year: 2017 ident: 4816_CR9 publication-title: J Gen Virol doi: 10.1099/jgv.0.000799 – volume: 50 start-page: 177 year: 2015 ident: 4816_CR35 publication-title: Virus Genes Virus Genes doi: 10.1007/s11262-014-1152-y – volume: 66 start-page: 1023 year: 2019 ident: 4816_CR13 publication-title: Transbound Emerg Dis doi: 10.1111/tbed.13073 – volume: 163 start-page: 489 year: 2018 ident: 4816_CR14 publication-title: Arch Virol doi: 10.1007/s00705-017-3612-x – volume: 20 start-page: 358 year: 2010 ident: 4816_CR28 publication-title: Rev Med Virol doi: 10.1002/rmv.663 – volume: 158 start-page: 1497 year: 2013 ident: 4816_CR25 publication-title: Arch Virol doi: 10.1007/s00705-013-1634-6 – volume: 5 start-page: e15300 year: 2010 ident: 4816_CR32 publication-title: PLoS One doi: 10.1371/journal.pone.0015300 – volume: 19 start-page: 493 year: 2016 ident: 4816_CR30 publication-title: Cell Host Microbe doi: 10.1016/j.chom.2016.03.009 – volume: 526 start-page: 72 year: 2019 ident: 4816_CR33 publication-title: Virology doi: 10.1016/j.virol.2018.10.006 – volume: 35 start-page: 1547 year: 2018 ident: 4816_CR19 publication-title: Mol Biol Evol doi: 10.1093/molbev/msy096 – volume: 81 start-page: 7620 year: 2007 ident: 4816_CR26 publication-title: J Virol doi: 10.1128/JVI.00083-07 – volume: 81 start-page: 8944 year: 2007 ident: 4816_CR31 publication-title: J Virol. doi: 10.1128/JVI.00180-07 – volume: 98 start-page: 2421 year: 2017 ident: 4816_CR1 publication-title: J Gen Virol doi: 10.1099/jgv.0.000911 – volume: 1 start-page: vev003 issue: 1 year: 2015 ident: 4816_CR22 publication-title: Virus Evol doi: 10.1093/ve/vev003 – ident: 4816_CR5 doi: 10.1099/vir.0.061978-0 – volume: 86 start-page: 3281 year: 2005 ident: 4816_CR24 publication-title: J Gen Virol doi: 10.1099/vir.0.81264-0 – volume: 78 start-page: 2948 year: 2004 ident: 4816_CR27 publication-title: J Virol doi: 10.1128/JVI.78.6.2948-2955.2004 – volume: 75 start-page: 103975 year: 2019 ident: 4816_CR16 publication-title: Infect Genet Evol doi: 10.1016/j.meegid.2019.103975 – volume: 14 start-page: 282 year: 2013 ident: 4816_CR4 publication-title: Infect Genet Evol doi: 10.1016/j.meegid.2012 – volume: 122 start-page: 441 year: 1988 ident: 4816_CR7 publication-title: Vet Rec doi: 10.1136/vr.122.18.441 – ident: 4816_CR12 doi: 10.1007/s00705-018-3875-x – volume: 91 start-page: e00450-17 issue: 14 year: 2017 ident: 4816_CR10 publication-title: J Virol doi: 10.1128/JVI.00450-17 – volume: 73 start-page: 152 year: 1999 ident: 4816_CR21 publication-title: J Virol doi: 10.1128/JVI.73.1.152-160.1999 – volume: 101 start-page: 840 year: 2020 ident: 4816_CR17 publication-title: J Gen Virol doi: 10.1099/jgv.0.001446 – ident: 4816_CR11 doi: 10.1093/ve/vex024 – volume: 28 start-page: 99 issue: 10 year: 2013 ident: 4816_CR8 publication-title: Virol J doi: 10.1186/1743-422X-10-99 – volume: 88 start-page: 166 year: 2007 ident: 4816_CR36 publication-title: J Gen Virol. doi: 10.1099/vir.0.82146-0 – ident: 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SubjectTerms | Biomedical and Life Sciences Biomedicine Brief Report Cysteine Cysteine proteinase cysteine proteinases Enterovirus G Farms genotype Genotypes Infectious Diseases Japan Medical Microbiology Papain Phylogeny Recombination sequence diversity sequence homology strains swine Virology viruses VP1 protein |
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Title | Multiple genotypes of enterovirus G carrying a papain-like cysteine protease (PL-CP) sequence circulating on two pig farms in Japan: first identification of enterovirus G10 carrying a PL-CP sequence |
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