Age-associated changes in gene expression in the anterior pituitary glands of female Japanese black cattle
Proper functioning of the anterior pituitary (AP) gland is imperative, however, is suppressed by aging via unclear mechanisms. Therefore, we identified differentially expressed genes (DEGs) in the AP glands of Japanese Black young heifers (approximately 22 months old) compared to old cows (approxima...
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Published in | Mammalian genome Vol. 33; no. 4; pp. 606 - 618 |
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Main Authors | , , , , |
Format | Journal Article |
Language | English |
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01.12.2022
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Abstract | Proper functioning of the anterior pituitary (AP) gland is imperative, however, is suppressed by aging via unclear mechanisms. Therefore, we identified differentially expressed genes (DEGs) in the AP glands of Japanese Black young heifers (approximately 22 months old) compared to old cows (approximately 120 months old) via deep sequencing of the transcriptome (RNA-seq) to characterize potentially important pathways. The young and old AP glands expressed 20,171 annotated genes. Of the total transcripts per million, approximately 41.6% and 35.5% were the sum of seven AP hormone genes in young and old AP glands, respectively, with difference observed in the sum between the young and old AP glands (
P
< 0.05). Moreover, we identified 48 downregulated genes and 218 upregulated genes in old compared to young AP glands (
P
< 0.01, fold change > 120%). The DEGs included 1 cytokine (
AIMP1
), 3 growth factors (
NRG2
,
PTN
, and
TGFB1
), 1 receptor-associated protein gene (
AGTRAP
), and 10 receptor genes, including
PRLHR
and two orphan G-protein-coupled receptors (
GPR156
and
GPR176
). Metascape analysis of the DEGs revealed “Peptide metabolic process,” “Regulation of hormone levels,” and “Peptide hormone processing” as enriched pathways. Furthermore, Ingenuity Pathway analysis of the DEGs revealed (1) a network of 24 genes (including
GPR156
and
PRLHR
) named “Neurological disease, organismal injury and abnormalities, and psychological disorders”, and (2) two canonical pathways (
P
< 0.01), namely “Huntington’s disease signaling”, and “AMPK signaling”. Thus, the findings of the current study revealed relevant DEGs, while identifying important pathways that occur during aging in AP glands of female cattle. |
---|---|
AbstractList | Proper functioning of the anterior pituitary (AP) gland is imperative, however, is suppressed by aging via unclear mechanisms. Therefore, we identified differentially expressed genes (DEGs) in the AP glands of Japanese Black young heifers (approximately 22 months old) compared to old cows (approximately 120 months old) via deep sequencing of the transcriptome (RNA-seq) to characterize potentially important pathways. The young and old AP glands expressed 20,171 annotated genes. Of the total transcripts per million, approximately 41.6% and 35.5% were the sum of seven AP hormone genes in young and old AP glands, respectively, with difference observed in the sum between the young and old AP glands (P < 0.05). Moreover, we identified 48 downregulated genes and 218 upregulated genes in old compared to young AP glands (P < 0.01, fold change > 120%). The DEGs included 1 cytokine (AIMP1), 3 growth factors (NRG2, PTN, and TGFB1), 1 receptor-associated protein gene (AGTRAP), and 10 receptor genes, including PRLHR and two orphan G-protein-coupled receptors (GPR156 and GPR176). Metascape analysis of the DEGs revealed “Peptide metabolic process,” “Regulation of hormone levels,” and “Peptide hormone processing” as enriched pathways. Furthermore, Ingenuity Pathway analysis of the DEGs revealed (1) a network of 24 genes (including GPR156 and PRLHR) named “Neurological disease, organismal injury and abnormalities, and psychological disorders”, and (2) two canonical pathways (P < 0.01), namely “Huntington’s disease signaling”, and “AMPK signaling”. Thus, the findings of the current study revealed relevant DEGs, while identifying important pathways that occur during aging in AP glands of female cattle. Proper functioning of the anterior pituitary (AP) gland is imperative, however, is suppressed by aging via unclear mechanisms. Therefore, we identified differentially expressed genes (DEGs) in the AP glands of Japanese Black young heifers (approximately 22 months old) compared to old cows (approximately 120 months old) via deep sequencing of the transcriptome (RNA-seq) to characterize potentially important pathways. The young and old AP glands expressed 20,171 annotated genes. Of the total transcripts per million, approximately 41.6% and 35.5% were the sum of seven AP hormone genes in young and old AP glands, respectively, with difference observed in the sum between the young and old AP glands ( P < 0.05). Moreover, we identified 48 downregulated genes and 218 upregulated genes in old compared to young AP glands ( P < 0.01, fold change > 120%). The DEGs included 1 cytokine ( AIMP1 ), 3 growth factors ( NRG2 , PTN , and TGFB1 ), 1 receptor-associated protein gene ( AGTRAP ), and 10 receptor genes, including PRLHR and two orphan G-protein-coupled receptors ( GPR156 and GPR176 ). Metascape analysis of the DEGs revealed “Peptide metabolic process,” “Regulation of hormone levels,” and “Peptide hormone processing” as enriched pathways. Furthermore, Ingenuity Pathway analysis of the DEGs revealed (1) a network of 24 genes (including GPR156 and PRLHR ) named “Neurological disease, organismal injury and abnormalities, and psychological disorders”, and (2) two canonical pathways ( P < 0.01), namely “Huntington’s disease signaling”, and “AMPK signaling”. Thus, the findings of the current study revealed relevant DEGs, while identifying important pathways that occur during aging in AP glands of female cattle. Proper functioning of the anterior pituitary (AP) gland is imperative, however, is suppressed by aging via unclear mechanisms. Therefore, we identified differentially expressed genes (DEGs) in the AP glands of Japanese Black young heifers (approximately 22 months old) compared to old cows (approximately 120 months old) via deep sequencing of the transcriptome (RNA-seq) to characterize potentially important pathways. The young and old AP glands expressed 20,171 annotated genes. Of the total transcripts per million, approximately 41.6% and 35.5% were the sum of seven AP hormone genes in young and old AP glands, respectively, with difference observed in the sum between the young and old AP glands (P < 0.05). Moreover, we identified 48 downregulated genes and 218 upregulated genes in old compared to young AP glands (P < 0.01, fold change > 120%). The DEGs included 1 cytokine (AIMP1), 3 growth factors (NRG2, PTN, and TGFB1), 1 receptor-associated protein gene (AGTRAP), and 10 receptor genes, including PRLHR and two orphan G-protein-coupled receptors (GPR156 and GPR176). Metascape analysis of the DEGs revealed "Peptide metabolic process," "Regulation of hormone levels," and "Peptide hormone processing" as enriched pathways. Furthermore, Ingenuity Pathway analysis of the DEGs revealed (1) a network of 24 genes (including GPR156 and PRLHR) named "Neurological disease, organismal injury and abnormalities, and psychological disorders", and (2) two canonical pathways (P < 0.01), namely "Huntington's disease signaling", and "AMPK signaling". Thus, the findings of the current study revealed relevant DEGs, while identifying important pathways that occur during aging in AP glands of female cattle.Proper functioning of the anterior pituitary (AP) gland is imperative, however, is suppressed by aging via unclear mechanisms. Therefore, we identified differentially expressed genes (DEGs) in the AP glands of Japanese Black young heifers (approximately 22 months old) compared to old cows (approximately 120 months old) via deep sequencing of the transcriptome (RNA-seq) to characterize potentially important pathways. The young and old AP glands expressed 20,171 annotated genes. Of the total transcripts per million, approximately 41.6% and 35.5% were the sum of seven AP hormone genes in young and old AP glands, respectively, with difference observed in the sum between the young and old AP glands (P < 0.05). Moreover, we identified 48 downregulated genes and 218 upregulated genes in old compared to young AP glands (P < 0.01, fold change > 120%). The DEGs included 1 cytokine (AIMP1), 3 growth factors (NRG2, PTN, and TGFB1), 1 receptor-associated protein gene (AGTRAP), and 10 receptor genes, including PRLHR and two orphan G-protein-coupled receptors (GPR156 and GPR176). Metascape analysis of the DEGs revealed "Peptide metabolic process," "Regulation of hormone levels," and "Peptide hormone processing" as enriched pathways. Furthermore, Ingenuity Pathway analysis of the DEGs revealed (1) a network of 24 genes (including GPR156 and PRLHR) named "Neurological disease, organismal injury and abnormalities, and psychological disorders", and (2) two canonical pathways (P < 0.01), namely "Huntington's disease signaling", and "AMPK signaling". Thus, the findings of the current study revealed relevant DEGs, while identifying important pathways that occur during aging in AP glands of female cattle. |
Author | Watanabe, Kenji Kereilwe, Onalenna Kadokawa, Hiroya Abdillah, Dimas Arya Mizukami, Yoichi |
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CitedBy_id | crossref_primary_10_1016_j_domaniend_2025_106936 crossref_primary_10_1111_age_13434 |
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Copyright | The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2022 The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2022. 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature. |
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ONE201610.1371/journal.pone.0152274279925445161481 MiyamotoYSkarzynskiDJOkudaKIs tumor necrosis factor alpha a trigger for the initiation of endometrial prostaglandin F(2alpha) release at luteolysis in cattle?Biol Reprod200062110911151:CAS:528:DC%2BD3cXisl2htr8%3D10.1095/biolreprod62.5.110910775155 PareekCSSmoczyńskiRKadarmideenHNDziubaPBłaszczykPSingle nucleotide polymorphism discovery in bovine pituitary gland using RNA-Seq technologyPLoS ONE201611e01613701:CAS:528:DC%2BC2sXitVart7Y%3D10.1371/journal.pone.0161370276064295015895 LiMLuXXiaHZhangCWangXIn-depth characterization of the pituitary transcriptome in Simmental and Chinese native cattleDomest Anim Endocrinol20196635421:CAS:528:DC%2BC1cXhvFSqtb%2FP10.1016/j.domaniend.2018.09.00330391830 HeWDaiXChenXHeJYinZZebrafish pituitary gene expression before and after sexual maturationJ Endocrinol20142214294401:CAS:528:DC%2BC2cXhtFOnurnI10.1530/JOE-13-048824709578 ZhouYZhouBPacheLChangMKhodabakhshiAHMetascape provides a biologist-oriented 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the pituitary gland and its action on PRL-secretion and lactotropic growthMol Endocrinol19926182518331:CAS:528:DyaK3sXjtlGmtg%3D%3D10.1210/mend.6.11.14801721480172 GunesSHekimGNArslanMAAsciREffects of aging on the male reproductive systemJ Assist Reprod Genet20163344145410.1007/s10815-016-0663-y268676404818633 NakamuraSNodaKMiwaMMinabeSHagiwaraTColocalization of GPR120 and anterior pituitary hormone-producing cells in female Japanese black cattleJ Reprod Dev2020661351411:CAS:528:DC%2BB3cXitlSltLjO10.1262/jrd.2019-11131902805 HaradaKFerdousTWatanabeKMizukamiYMishimaKEffects of an elemental diet, Elental, may differ between healthy oral cells and oral cancer cellsOncol Rep2021457387511:CAS:528:DC%2BB3MXhtlCgtr8%3D10.3892/or.2020.789633416174 GoreAJPhilipsDPMillerWLBernardDJDifferential regulation of follicle stimulating hormone by activin A and TGFB1 in murine gonadotropesReprod Biol Endocrinol20053731:CAS:528:DC%2BD28XislShsbk%3D10.1186/1477-7827-3-73163845331351181 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Snippet | Proper functioning of the anterior pituitary (AP) gland is imperative, however, is suppressed by aging via unclear mechanisms. Therefore, we identified... |
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SubjectTerms | Aging Animal Genetics and Genomics anterior pituitary Biomedical and Life Sciences Cattle Cell Biology cows Cytokines G protein-coupled receptors Gene expression gene expression regulation genes Growth factors Human Genetics Huntingtons disease Life Sciences nervous system diseases Neurological diseases Peptides Pituitary (anterior) sequence analysis Signal transduction transcriptome Transcriptomes Transforming growth factor-b1 Wagyu |
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Title | Age-associated changes in gene expression in the anterior pituitary glands of female Japanese black cattle |
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