The molecular virology of coronaviruses
Few human pathogens have been the focus of as much concentrated worldwide attention as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause of COVID-19. Its emergence into the human population and ensuing pandemic came on the heels of severe acute respiratory syndrome coronavirus...
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Published in | The Journal of biological chemistry Vol. 295; no. 37; pp. 12910 - 12934 |
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Main Authors | , , , , , |
Format | Journal Article |
Language | English |
Published |
United States
Elsevier Inc
11.09.2020
American Society for Biochemistry and Molecular Biology |
Subjects | |
Online Access | Get full text |
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Abstract | Few human pathogens have been the focus of as much concentrated worldwide attention as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause of COVID-19. Its emergence into the human population and ensuing pandemic came on the heels of severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV), two other highly pathogenic coronavirus spillovers, which collectively have reshaped our view of a virus family previously associated primarily with the common cold. It has placed intense pressure on the collective scientific community to develop therapeutics and vaccines, whose engineering relies on a detailed understanding of coronavirus biology. Here, we present the molecular virology of coronavirus infection, including its entry into cells, its remarkably sophisticated gene expression and replication mechanisms, its extensive remodeling of the intracellular environment, and its multifaceted immune evasion strategies. We highlight aspects of the viral life cycle that may be amenable to antiviral targeting as well as key features of its biology that await discovery. |
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AbstractList | Few human pathogens have been the focus of as much concentrated worldwide attention as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause of COVID-19. Its emergence into the human population and ensuing pandemic came on the heels of severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV), two other highly pathogenic coronavirus spillovers, which collectively have reshaped our view of a virus family previously associated primarily with the common cold. It has placed intense pressure on the collective scientific community to develop therapeutics and vaccines, whose engineering relies on a detailed understanding of coronavirus biology. Here, we present the molecular virology of coronavirus infection, including its entry into cells, its remarkably sophisticated gene expression and replication mechanisms, its extensive remodeling of the intracellular environment, and its multifaceted immune evasion strategies. We highlight aspects of the viral life cycle that may be amenable to antiviral targeting as well as key features of its biology that await discovery. Few human pathogens have been the focus of as much concentrated worldwide attention as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause of COVID-19. Its emergence into the human population and ensuing pandemic came on the heels of severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV), two other highly pathogenic coronavirus spillovers, which collectively have reshaped our view of a virus family previously associated primarily with the common cold. It has placed intense pressure on the collective scientific community to develop therapeutics and vaccines, whose engineering relies on a detailed understanding of coronavirus biology. Here, we present the molecular virology of coronavirus infection, including its entry into cells, its remarkably sophisticated gene expression and replication mechanisms, its extensive remodeling of the intracellular environment, and its multifaceted immune evasion strategies. We highlight aspects of the viral life cycle that may be amenable to antiviral targeting as well as key features of its biology that await discovery.Few human pathogens have been the focus of as much concentrated worldwide attention as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause of COVID-19. Its emergence into the human population and ensuing pandemic came on the heels of severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV), two other highly pathogenic coronavirus spillovers, which collectively have reshaped our view of a virus family previously associated primarily with the common cold. It has placed intense pressure on the collective scientific community to develop therapeutics and vaccines, whose engineering relies on a detailed understanding of coronavirus biology. Here, we present the molecular virology of coronavirus infection, including its entry into cells, its remarkably sophisticated gene expression and replication mechanisms, its extensive remodeling of the intracellular environment, and its multifaceted immune evasion strategies. We highlight aspects of the viral life cycle that may be amenable to antiviral targeting as well as key features of its biology that await discovery. |
Author | Hartenian, Ella Glaunsinger, Britt A. Ly, Michael Nandakumar, Divya Tucker, Jessica M. Lari, Azra |
Author_xml | – sequence: 1 givenname: Ella orcidid: 0000-0001-9277-2152 surname: Hartenian fullname: Hartenian, Ella organization: Department of Molecular and Cell Biology, University of California, Berkeley, California, USA – sequence: 2 givenname: Divya surname: Nandakumar fullname: Nandakumar, Divya organization: Department of Plant and Microbial Biology, University of California, Berkeley, California, USA – sequence: 3 givenname: Azra orcidid: 0000-0002-9649-8231 surname: Lari fullname: Lari, Azra organization: Department of Plant and Microbial Biology, University of California, Berkeley, California, USA – sequence: 4 givenname: Michael surname: Ly fullname: Ly, Michael organization: Department of Molecular and Cell Biology, University of California, Berkeley, California, USA – sequence: 5 givenname: Jessica M. surname: Tucker fullname: Tucker, Jessica M. organization: Department of Plant and Microbial Biology, University of California, Berkeley, California, USA – sequence: 6 givenname: Britt A. surname: Glaunsinger fullname: Glaunsinger, Britt A. email: glaunsinger@berkeley.edu organization: Department of Molecular and Cell Biology, University of California, Berkeley, California, USA |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/32661197$$D View this record in MEDLINE/PubMed |
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Cites_doi | 10.1074/jbc.AC120.013056 10.1371/journal.ppat.1000863 10.3346/jkms.2020.35.e86 10.1128/JVI.00003-17 10.1073/pnas.2003138117 10.1038/nm1001 10.1016/j.chom.2014.09.009 10.1128/JVI.01542-10 10.1128/jvi.57.1.328-334.1986 10.1128/JVI.01266-07 10.1073/pnas.1706696114 10.1128/JVI.78.11.5913-5922.2004 10.1086/675991 10.1128/JVI.00127-20 10.1128/JVI.01467-06 10.1099/vir.0.81624-0 10.1016/j.antiviral.2017.12.010 10.1016/S1473-3099(20)30113-4 10.1016/j.virol.2014.04.027 10.1128/JVI.01505-08 10.1128/JVI.02231-06 10.1128/JVI.79.4.2079-2086.2005 10.1016/j.chom.2020.04.009 10.20506/rst.28.1.1856 10.1007/s00705-012-1404-x 10.1128/JVI.02576-13 10.1128/JVI.00626-13 10.1042/BJ20131461 10.1038/s41422-020-0282-0 10.1128/JVI.79.11.6620-6630.2005 10.1006/viro.2000.0611 10.1016/j.tim.2016.03.003 10.1128/JVI.01358-06 10.1074/jbc.M704870200 10.1128/mBio.00524-13 10.1128/JVI.02012-06 10.4049/jimmunol.0903490 10.1128/JVI.00725-07 10.1016/j.antiviral.2014.06.013 10.1016/j.virusres.2006.01.017 10.1146/annurev-virology-100114-055218 10.1371/journal.ppat.1004166 10.1128/JVI.79.4.2506-2516.2005 10.1016/S0140-6736(20)30183-5 10.1093/emboj/21.9.2076 10.1038/s41586-020-2286-9 10.1371/journal.pbio.0060226 10.1128/JVI.02203-08 10.1073/pnas.0307877101 10.1371/journal.ppat.1006474 10.1016/j.coviro.2019.04.002 10.1371/journal.pbio.3000715 10.1101/cshperspect.a011254 10.1016/j.virusres.2007.11.017 10.1086/423808 10.1038/s41591-020-0819-2 10.1099/vir.0.80671-0 10.1126/science.abb3405 10.1371/journal.pone.0036521 10.1126/science.abc2241 10.1038/cr.2008.15 10.1126/science.1085952 10.1128/jvi.56.3.912-920.1985 10.1002/j.1460-2075.1996.tb00553.x 10.1111/irv.12101 10.1371/journal.ppat.1002294 10.1086/423286 10.1038/ni.1979 10.1128/JVI.01348-19 10.1128/JVI.00367-09 10.1073/pnas.1921485117 10.1080/22221751.2020.1729069 10.1038/s41586-020-2012-7 10.3390/v11100972 10.1128/JVI.02480-09 10.1021/ja1098325 10.1128/JVI.01774-19 10.1016/j.celrep.2019.03.063 10.1016/j.virusres.2019.03.005 10.1016/j.cell.2020.02.058 10.1016/j.virol.2018.01.026 10.1074/jbc.RA120.013679 10.1128/JVI.79.23.14909-14922.2005 10.1128/JVI.80.1.296-305.2006 10.1021/bi200303r 10.1371/journal.pone.0019655 10.1096/fj.06-6589com 10.1196/annals.1408.002 10.1099/vir.0.83665-0 10.1073/pnas.1407087111 10.1128/JVI.01890-13 10.4161/auto.29309 10.1128/mBio.00221-18 10.1073/pnas.1201130109 10.1016/j.antiviral.2017.02.007 10.1016/j.chom.2012.04.011 10.1128/JVI.00631-14 10.1016/j.virusres.2010.08.017 10.1002/path.1570 10.1016/j.ejmech.2017.10.064 10.1126/science.abb7498 10.1073/pnas.0603144103 10.1128/JVI.02776-14 10.1371/journal.pone.0165077 10.1182/blood-2004-10-4166 10.1016/j.jsb.2010.11.021 10.1038/ni1102-1013 10.1016/j.antiviral.2017.11.001 10.1128/JVI.05560-11 10.1371/journal.ppat.1004502 10.1073/pnas.1608147113 10.1038/s41467-019-10280-3 10.1016/j.chom.2020.02.001 10.1038/cr.2013.92 10.1038/s42003-018-0175-7 10.1128/JVI.77.8.4597-4608.2003 10.1016/j.jmb.2006.06.021 10.1128/JVI.78.14.7833-7838.2004 10.1016/j.chom.2016.01.007 10.1006/viro.1997.8681 10.1126/science.abc5312 10.1128/JVI.75.9.4439-4443.2001 10.1016/j.febslet.2006.11.046 10.1146/annurev-virology-110615-042301 10.3390/v5010279 10.1128/JVI.02143-16 10.1128/jvi.64.11.5367-5375.1990 10.1038/nsmb1123 10.1371/journal.ppat.1002059 10.1016/j.molcel.2020.04.022 10.1128/JVI.02406-07 10.1128/JVI.00893-18 10.1073/pnas.1323705111 10.1016/j.febslet.2006.05.051 10.1128/JVI.78.11.5619-5632.2004 10.1128/JVI.02472-07 10.1371/journal.ppat.1002433 10.1128/JVI.02501-05 10.1128/jvi.71.12.9278-9284.1997 10.1016/j.febslet.2005.10.065 10.1371/journal.ppat.1000896 10.1016/j.semarthrit.2010.10.002 10.1126/science.1092002 10.3201/eid1103.040906 10.1007/s10096-004-1271-9 10.1099/vir.0.033589-0 10.1016/j.virol.2011.03.029 10.1128/JVI.02371-08 10.1016/j.virol.2006.02.003 10.1128/mBio.01174-14 10.1126/science.1116480 10.1128/JVI.75.17.8173-8186.2001 10.1093/nar/gkp904 10.1038/s41577-020-0311-8 10.1128/JVI.02062-10 10.1093/nar/gkv838 10.1128/JVI.01199-08 10.1128/JVI.01772-09 10.1016/j.virol.2015.02.005 10.1016/j.virol.2009.02.021 10.1128/JVI.00090-07 10.1016/S0140-6736(03)13412-5 10.1016/j.antiviral.2020.104742 10.1128/JVI.02232-10 10.1016/j.virusres.2007.10.009 10.1128/JVI.02406-09 10.1128/JVI.01296-07 10.1128/JVI.01782-06 10.1111/j.1462-5822.2010.01437.x 10.1016/j.coi.2006.03.020 10.1073/pnas.0900971106 10.1111/febs.14863 10.1371/journal.ppat.1003565 10.1128/JVI.00373-19 10.1016/j.virol.2007.01.020 10.1056/NEJMc2001737 10.1016/j.cell.2020.02.052 10.1128/JVI.01794-07 10.1128/JVI.78.2.980-994.2004 10.1371/journal.ppat.1004320 10.1038/s41586-020-2008-3 10.1371/journal.pone.0076469 10.1128/JVI.00128-13 10.1128/JVI.01052-08 10.1016/j.virol.2015.01.019 10.1016/j.virol.2019.08.031 10.1038/nsmb.1680 10.1146/annurev-virology-031413-085507 10.1038/nature02145 10.1016/S0065-3527(08)60286-9 10.1007/978-1-4615-1325-4_71 10.1038/nm1726 10.1128/JVI.00042-11 10.1016/bs.aivir.2016.08.007 10.1126/science.1085658 10.1128/JVI.00078-11 10.1073/pnas.0808790106 10.1093/nar/18.7.1825 10.1007/978-1-4615-1325-4_13 10.1038/s41586-020-2180-5 10.1016/j.antiviral.2013.11.006 10.1016/j.str.2004.01.016 10.1093/nar/gkz409 10.3201/eid1002.030913 10.1083/jcb.131.2.339 10.1128/JVI.79.17.11335-11342.2005 10.1128/JVI.00702-07 10.1128/IAI.73.4.1907-1916.2005 10.1006/viro.2002.1412 10.1038/s41422-020-0305-x 10.1086/519166 10.1093/jac/dki346 10.1007/978-1-62703-032-8_1 10.1016/S0140-6736(03)13413-7 10.1093/infdis/jiv380 10.1128/JVI.79.13.8065-8078.2005 10.1128/mBio.00258-16 10.1016/j.antiviral.2012.07.007 10.1038/nm.2972 10.1128/JVI.77.5.2922-2927.2003 10.2741/3046 10.1016/j.virol.2004.09.033 10.1128/JVI.01331-15 10.4161/rna.8.2.14991 10.1128/AAC.00957-12 10.1038/nrmicro3469 10.1016/j.bbrc.2003.10.075 10.1128/JVI.00291-19 10.1016/S0140-6736(03)13973-6 10.1128/jvi.68.12.8131-8140.1994 10.1128/JVI.77.14.7890-7902.2003 10.1128/JVI.01253-09 10.1016/j.virusres.2014.11.021 10.1016/j.antiviral.2011.04.009 10.1016/j.jmb.2009.09.040 10.1111/j.1469-0691.2004.00956.x 10.1038/s41467-020-16256-y 10.1128/JVI.78.13.6723-6734.2004 10.1128/JVI.02011-09 10.1128/JVI.02050-13 10.1128/JVI.76.8.3697-3708.2002 10.1128/mBio.00319-19 10.1038/s41591-020-0820-9 10.1042/BJ20040984 10.1371/journal.ppat.1002315 10.1128/JVI.01700-12 10.3390/diseases4030026 10.1016/S0042-6822(03)00117-X 10.7554/eLife.42037 10.1371/journal.ppat.1003760 10.1128/jvi.64.12.6045-6053.1990 10.1074/jbc.M109.008227 10.2353/ajpath.2007.061088 10.1093/infdis/jiv381 10.1128/JVI.01782-12 10.1371/journal.pone.0003299 10.1006/viro.1996.0165 10.1016/j.antiviral.2020.104811 10.1128/JVI.01352-15 10.1016/j.virusres.2006.06.005 10.1371/journal.pone.0000459 10.1073/pnas.0505577102 10.1128/JVI.78.8.3863-3871.2004 10.1126/science.1085953 10.1128/JVI.02146-06 10.1002/path.4454 10.1371/journal.ppat.0030109 10.1016/j.chom.2017.08.006 10.1016/j.virusres.2014.12.001 10.1038/sj.emboj.7601368 10.1099/vir.0.038414-0 10.1128/JVI.00440-09 10.1517/14728222.2012.665879 10.1128/JVI.80.6.2684-2693.2006 10.1128/jvi.41.2.557-565.1982 10.1073/pnas.1618310114 10.1128/JVI.02622-07 10.1016/j.antiviral.2014.12.015 10.1001/jama.2020.0757 10.1126/science.abb2507 10.1074/jbc.M407233200 10.1128/JVI.00100-13 10.1016/S0046-8177(03)00367-8 10.1016/j.virusres.2009.01.005 10.1007/s11373-005-9035-9 10.1128/JVI.78.11.6048-6054.2004 10.1128/JVI.74.17.8127-8134.2000 10.1073/pnas.0701000104 10.1128/mBio.01503-17 10.1074/jbc.M116.716100 10.1128/JVI.00110-15 10.1099/0022-1317-81-4-853 10.1016/j.virol.2015.02.007 10.1128/JVI.01012-07 10.1016/j.virol.2013.11.040 10.1007/978-1-4614-5037-5_2 10.1128/JVI.01958-12 10.1093/nar/gkr893 10.1128/JVI.06048-11 10.1042/BJ20050698 10.1016/j.cell.2020.04.026 10.1128/jvi.62.11.4280-4287.1988 10.1016/bs.aivir.2016.08.008 10.1128/JVI.80.2.785-793.2006 10.1128/JVI.02560-09 10.1371/journal.pone.0019436 10.1128/JVI.73.8.6862-6871.1999 10.1371/journal.ppat.1005473 10.1128/JVI.78.22.12557-12565.2004 10.1016/S0140-6736(20)30566-3 10.1128/JVI.00253-07 10.1371/journal.ppat.1000054 10.1371/journal.pone.0070548 10.1084/jem.20080091 10.1038/s41419-018-0917-y 10.1128/jvi.66.6.3522-3530.1992 10.1038/s41467-020-15562-9 10.1073/pnas.0508200103 |
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References | Zhou, Li, Wang, Wang, Shi (bib231) 2012; 93 Wu, Wang, Shen, Peng, Li, Zhao, Li, Li, Bi, Yang, Gong, Xiao, Fan, Tan, Wu (bib45) 2020; 368 Kim, Ko, Kim, Kim, Kim, Chung, Kim, Han, Kim, Chin (bib282) 2020; 35 Ying, Li, Dimitrov (bib265) 2016; 213 Siu, Kok, Ng, Poon, Yuen, Zheng, Jin (bib233) 2009; 284 Amara, Mercer (bib261) 2015; 13 Liu, Fung, Chong, Shukla, Hilgenfeld (bib186) 2014; 109 Ou, Liu, Lei, Li, Mi, Ren, Guo, Guo, Chen, Hu, Xiang, Mu, Chen, Chen, Hu (bib43) 2020; 11 Shi, Su, Li, Liang, Dong, Huang (bib320) 2019; 265 Tay, Poh, Rénia, MacAry, Ng (bib44) 2020; 20 Lontok, Corse, Machamer (bib165) 2004; 78 Zhang, Li, Yan, Ming, Jia, Lou, Rao (bib318) 2018; 92 Brian, Baric (bib50) 2005; 287 Miknis, Donaldson, Umland, Rimmer, Baric, Schultz (bib103) 2009; 83 Gosert, Kanjanahaluethai, Egger, Bienz, Baker (bib147) 2002; 76 Lokugamage, Narayanan, Nakagawa, Terasaki, Ramirez, Tseng, Makino (bib203) 2015; 89 Cabeça, Granato, Bellei (bib211) 2013; 7 Cheng, Mir (bib127) 2012; 86 Smith, Case, Blanc, Isakov, Shomron, Vignuzzi, Denison (bib117) 2015; 89 Lundin, Dijkman, Bergström, Kann, Adamiak, Hannoun, Kindler, Jónsdóttir, Muth, Kint, Forlenza, Müller, Drosten, Thiel, Trybala (bib151) 2014; 10 Wang, Cao, Zhang, Yang, Liu, Xu, Shi, Hu, Zhong, Xiao (bib30) 2020; 30 DeDiego, Nieto-Torres, Jiménez-Guardeño, Regla-Nava, Álvarez, Oliveros, Zhao, Fett, Perlman, Enjuanes (bib269) 2011; 7 Abernathy, Glaunsinger (bib194) 2015; 479–480 Chen, Ping, Lee, Chen, Lee, Chan, Lien, Jap, Lin, Kao, Chen (bib275) 2007; 196 Inoue, Tanaka, Tanaka, Inoue, Morita, Zhuang, Hattori, Sugamura (bib26) 2007; 81 Frana, Behnke, Sturman, Holmes (bib14) 1985; 56 Lan, Ge, Yu, Shan, Zhou, Fan, Zhang, Shi, Wang, Zhang, Wang (bib34) 2020; 581 Fink, Cookson (bib257) 2005; 73 Follis, York, Nunberg (bib39) 2006; 350 Zhang, Lin, Sun, Curth, Drosten, Sauerhering, Becker, Rox, Hilgenfeld (bib60) 2020; 368 Schwegmann-Wessels, Al-Falah, Escors, Wang, Zimmer, Deng, Enjuanes, Naim, Herrler (bib166) 2004; 279 Velthuis, Te, Arnold, Cameron, van den Worm, Snijder (bib94) 2010; 38 Chen, Cai, Pan, Xiang, Tien, Ahola, Guo (bib129) 2009; 106 Kumar, Shin, Shie, Ku, Kim, Go, Huang, Kim, Liang (bib61) 2017; 141 Makino, Yokomori, Lai (bib168) 1990; 64 (bib192) 2004; 303 Venkatagopalan, Daskalova, Lopez, Dolezal, Hogue (bib164) 2015; 478 Beachboard, Anderson-Daniels, Denison (bib312) 2015; 89 Lin, Liao, Lai (bib133) 1994; 68 Cannalire, Tarantino, Astolfi, Barreca, Sabatini, Massari, Tabarrini, Milani, Querat, Mastrangelo, Manfroni, Cecchetti (bib143) 2018; 143 Cinatl, Morgenstern, Bauer, Chandra, Rabenau, Doerr (bib223) 2003; 362 Goldman, Sammani, Kempf, Saadat, Letsiou, Wang, Moreno-Vinasco, Rizzo, Fortman, Garcia (bib247) 2014; 4 Snijder, Decroly, Ziebuhr (bib298) 2016; 96 Nieto-Torres, DeDiego, Álvarez, Jiménez-Guardeño, Regla-Nava, Llorente, Kremer, Shuo, Enjuanes (bib301) 2011; 415 Wang, Sawicki (bib71) 2001; 494 Escors, Izeta, Capiscol, Enjuanes (bib169) 2003; 77 Ontiveros, Kuo, Masters, Perlman (bib179) 2001; 494 Spiegel, Pichlmair, Martínez-Sobrido, Cros, García-Sastre, Haller, Weber (bib214) 2005; 79 Millet, Whittaker (bib13) 2014; 111 Huang, Lokugamage, Rozovics, Narayanan, Semler, Makino (bib81) 2011; 7 Müller, Schulte, Lange-Grünweller, Obermann, Madhugiri, Pleschka, Ziebuhr, Hartmann, Grünweller (bib135) 2018; 150 Plant, Rakauskaite, Taylor, Dinman (bib54) 2010; 84 Rota, Oberste, Monroe, Nix, Campagnoli, Icenogle, Peñaranda, Bankamp, Maher, Chen, Tong, Tamin, Lowe, Frace, DeRisi (bib184) 2003; 300 Kanzawa, Nishigaki, Hayashi, Ishii, Furukawa, Niiro, Yasui, Kohara, Morita, Matsushima, Le, Masuda, Kannagi (bib250) 2006; 580 Hagemeijer, Ulasli, Vonk, Reggiori, Rottier, de Haan (bib68) 2011; 85 Bouvet, Imbert, Subissi, Gluais, Canard, Decroly (bib116) 2012; 109 Neuman, Kiss, Kunding, Bhella, Baksh, Connelly, Droese, Klaus, Makino, Sawicki, Siddell, Stamou, Wilson, Kuhn, Buchmeier (bib304) 2011; 174 Nicholls, Poon, Lee, Ng, Lai, Leung, Chu, Hui, Mak, Lim, Yan, Chan, Tsang, Guan, Yuen (bib218) 2003; 361 Lai, Cavanagh (bib185) 1997; 48 Zhou, Yu, Du, Fan, Liu, Liu, Xiang, Wang, Song, Gu, Guan, Wei, Li, Wu, Xu (bib221) 2020; 395 Gadlage, Sparks, Beachboard, Cox, Doyle, Stobart, Denison (bib311) 2010; 84 He, Zhang, Xu, Yang, Yang, Feng, Xia, Zhou, Zhen, Feng, Guo, Zhang, Tu (bib2) 2014; 88 Lo, Tsai, Lin, Lin, Wu (bib74) 2019; 286 Gralinski, Baric (bib212) 2015; 235 Ireland, Stohlman, Hinton, Atkinson, Bergmann (bib215) 2008; 82 Funk, Wang, Ito, Travanty, Voelker, Holmes, Mason (bib216) 2012; 93 Sawicki, Sawicki, Siddell (bib79) 2007; 81 Gordon, Tchesnokov, Woolner, Perry, Feng, Porter, Gotte (bib142) 2020; 295 Zhu, Chakraborti, He, Roberts, Sheahan, Xiao, Hensley, Prabakaran, Rockx, Sidorov, Corti, Vogel, Feng, Kim, Wang (bib285) 2007; 104 Kuo, Masters (bib303) 2003; 77 Gaucherand, Porter, Levene, Price, Schmaling, Rycroft, Kevorkian, McCormick, Khaperskyy, Gaglia (bib200) 2019; 27 Yue, Nabar, Shi, Kamenyeva, Xiao, Hwang, Wang, Kehrl (bib258) 2018; 9 Zhou, Yang, Wang, Hu, Zhang, Zhang, Si, Zhu, Li, Huang, Chen, Chen, Luo, Guo, Jiang (bib7) 2020; 579 Schaecher, Touchette, Schriewer, Buller, Pekosz (bib274) 2007; 81 Hussain, Gallagher (bib322) 2010; 153 Benedict, Norris, Ware (bib260) 2002; 3 Smith, Denison (bib111) 2013; 9 Tsoi, Li, Chen, Lau, Tsui, Chan (bib268) 2014; 464 Kalia, Sarkar, Gourley, Rouse, Ahmed (bib293) 2006; 18 Plant, Dinman (bib55) 2008; 13 Shulla, Heald-Sargent, Subramanya, Zhao, Perlman, Gallagher (bib12) 2011; 85 Vennema, Godeke, Rossen, Voorhout, Horzinek, Opstelten, Rottier (bib157) 1996; 15 Narayanan, Huang, Makino (bib187) 2008; 133 Lokugamage, Hage, Schindewolf, Rajsbaum, Menachery (bib190) 2020 Eckerle, Lu, Sperry, Choi, Denison (bib113) 2007; 81 Züst, Cervantes-Barragan, Habjan, Maier, Neuman, Ziebuhr, Szretter, Baker, Barchet, Diamond, Siddell, Ludewig, Thiel (bib132) 2011; 12 Narayanan, Chen, Maeda, Makino (bib175) 2003; 77 Bhardwaj, Sun, Holzenburg, Guarino, Kao (bib316) 2006; 361 Li, Li, Farzan, Harrison (bib286) 2005; 309 Gordon, Jang, Bouhaddou, Xu, Obernier, White, O'Meara, Rezelj, Guo, Swaney, Tummino, Hüttenhain, Kaake, Richards, Tutuncuoglu (bib137) 2020; 583 Andersen, Rambaut, Lipkin, Holmes, Garry (bib31) 2020; 26 Corey, Mascola, Fauci, Collins (bib47) 2020; 368 Hao, Wojdyla, Zhao, Han, Das, Zlatev, Manoharan, Wang, Cui (bib109) 2017; 13 Blanco-Melo, Nilsson-Payant, Liu, Uhl, Hoagland, Møller, Jordan, Oishi, Panis, Sachs, Wang, Schwartz, Lim, Albrecht, tenOever (bib222) 2020; 181 Tan, Teng, Shen, Tan, Goh, Fielding, Ooi, Tan, Lim, Hong (bib272) 2004; 78 Simmons, Gosalia, Rennekamp, Reeves, Diamond, Bates (bib24) 2005; 102 Adedeji, Singh, Calcaterra, DeDiego, Enjuanes, Weiss, Sarafianos (bib145) 2012; 56 Wu, Chen, Yeh (bib86) 2014; 16 Wang, Yang, Liu, Guo, Zhang, Zhang, Jiang (bib25) 2008; 18 Yang, Xiong, Zhang, Yan, Nguyen, Ng, Lu, Brendese, Yang, Wang, Yang (bib264) 2005; 392 Yount, Roberts, Sims, Deming, Frieman, Sparks, Denison, Davis, Baric (bib178) 2005; 79 Qian, Dominguez, Holmes (bib16) 2013; 8 Gribble, Pruijssers, Agostini, Anderson-Daniels, Chappell, Lu, Stevens, Routh, Denison (bib125) 2020 Kopecky-Bromberg, Martínez-Sobrido, Palese (bib205) 2006; 80 Khan, Fielding, Tan, Chou, Shen, Lim, Hong, Tan (bib259) 2006; 122 Zúñiga, Sola, Alonso, Enjuanes (bib78) 2004; 78 Li (bib4) 2016; 3 Cencic, Desforges, Hall, Kozakov, Du, Min, Dingledine, Fu, Vajda, Talbot, Pelletier (bib136) 2011; 85 Nguyen, Hogue (bib161) 1997; 71 Züst, Cervantes-Barragán, Kuri, Blakqori, Weber, Ludewig, Thiel (bib235) 2007; 3 Freundt, Yu, Park, Lenardo, Xu (bib321) 2009; 83 Wang, Shi, Jiang, Zhang, Wang, Tong, Guo, Fu, Cui, Liu, Arledge, Chen, Zhang, Wang (bib17) 2013; 23 Vignuzzi, Wendt, Andino (bib120) 2008; 14 Hussain, Perlman, Gallagher (bib324) 2008; 82 Clementz, Chen, Banach, Wang, Sun, Ratia, Baez-Santos, Wang, Takayama, Ghosh, Li, Mesecar, Baker (bib63) 2010; 84 Hyde, Diamond (bib126) 2015; 479–480 Kamitani, Narayanan, Huang, Lokugamage, Ikegami, Ito, Kubo, Makino (bib195) 2006; 103 Paules, Marston, Jama (bib1) 2020 Huang, Wang, Li, Ren, Zhao, Hu, Zhang, Fan, Xu, Gu, Cheng, Yu, Xia, Wei, Wu (bib220) 2020; 395 Masters (bib172) 2019; 537 Narayanan, Huang, Lokugamage, Kamitani, Ikegami, Tseng, Makino (bib196) 2008; 82 Opstelten, Raamsman, Wolfs, Horzinek, Rottier (bib162) 1995; 131 Schmidt, Schwerd, Hamm, Hellmuth, Cui, Wenzel, Hoffmann, Michallet, Besch, Hopfner, Endres, Rothenfusser (bib226) 2009; 106 de Haan, Masters, Shen, Weiss, Rottier (bib176) 2002; 296 Satija, Lal (bib191) 2007; 1102 Denison, Spaan, van der Meer, Gibson, Sims, Prentice, Lu (bib153) 1999; 73 DeDiego, Álvarez, Almazán, Rejas, Lamirande, Roberts, Shieh, Zaki, Subbarao, Enjuanes (bib302) 2007; 81 Siu, Teoh, Lo, Chan, Kien, Escriou, Tsao, Nicholls, Altmeyer, Peiris, Bruzzone, Nal (bib3) 2008; 82 Ahn, Choi, Taylor, Oh (bib95) 2012; 157 Raney, Byrd, Aarattuthodiyil (bib110) 2013; 767 Thevarajan, Nguyen, Koutsakos, Druce, Caly, van de Sandt, Jia, Nicholson, Catton, Cowie, Tong, Lewin, Kedzierska (bib278) 2020; 26 Bos, Luytjes, van der Meulen, Koerten, Spaan (bib156) 1996; 218 Velthuis, Te, van den Worm, Snijder (bib98) 2012; 40 Franks, Chong, Chui, Galvin, Lourens, Reid, Selbs, Mcevoy, Hayden, Fukuoka, Taubenberger, Travis (bib217) 2003; 34 Chen, van den Born, van den Worm, Pleij, Snijder, Olsthoorn (bib171) 2007; 81 Marceau (bib104) 2012; 922 Shen, Wen, Liu (bib180) 2003; 311 Liu, Yang, Gu, Yue, Wu, Wu, Zhu (bib248) 2007; 21 Glowacka, Bertram, Müller, Allen, Soilleux, Pfefferle, Steffen, Tsegaye, He, Gnirss, Niemeyer, Schneider, Drosten, Pöhlmann (bib10) 2011; 85 Zhou, Pan, Zhang, Li, Zhang, Bai, Huang, Peng, Zhang, Liu, Tao, Zhang (bib27) 2016; 291 van Hemert, van den Worm, Knoops, Mommaas, Gorbalenya, Snijder (bib152) 2008; 4 Haagmans, Kuiken, Martina, Fouchier, Rimmelzwaan, van Amerongen, van Riel, de Jong, Itamura, Chan, Tashiro, Osterhaus (bib224) 2004; 10 Imbert, Guillemot, Bourhis, Bussetta, Coutard, Egloff, Ferron, Gorbalenya, Canard (bib97) 2006; 25 Sawicki, Sawicki (bib70) 2005; 287 Bouvet, Debarnot, Imbert, Selisko, Snijder, Canard, Decroly (bib130) 2010; 6 Fosmire, Hwang, Makino (bib170) 1992; 66 Peng, Lin, Lin, Lo, Ts Kuo (10.1074/jbc.REV120.013930_bib159) 2013; 87 Park (10.1074/jbc.REV120.013930_bib28) 2016; 113 Makino (10.1074/jbc.REV120.013930_bib168) 1990; 64 Zhang (10.1074/jbc.REV120.013930_bib318) 2018; 92 Alexander (10.1074/jbc.REV120.013930_bib41) 2009; 28 Funk (10.1074/jbc.REV120.013930_bib216) 2012; 93 Zúñiga (10.1074/jbc.REV120.013930_bib88) 2010; 84 Channappanavar (10.1074/jbc.REV120.013930_bib209) 2016; 19 Nicholls (10.1074/jbc.REV120.013930_bib218) 2003; 361 Minskaia (10.1074/jbc.REV120.013930_bib112) 2006; 103 Kamitani (10.1074/jbc.REV120.013930_bib204) 2009; 16 Egloff (10.1074/jbc.REV120.013930_bib101) 2004; 101 Dosch (10.1074/jbc.REV120.013930_bib251) 2009; 142 Wang (10.1074/jbc.REV120.013930_bib71) 2001; 494 Graham (10.1074/jbc.REV120.013930_bib124) 2018; 1 Deng (10.1074/jbc.REV120.013930_bib317) 2017; 114 Knoops (10.1074/jbc.REV120.013930_bib66) 2008; 6 Li (10.1074/jbc.REV120.013930_bib286) 2005; 309 Hagemeijer (10.1074/jbc.REV120.013930_bib68) 2011; 85 Raney (10.1074/jbc.REV120.013930_bib110) 2013; 767 Paules (10.1074/jbc.REV120.013930_bib1) 2020 Rota (10.1074/jbc.REV120.013930_bib184) 2003; 300 Zhao (10.1074/jbc.REV120.013930_bib323) 2009; 83 Müller (10.1074/jbc.REV120.013930_bib135) 2018; 150 McBride (10.1074/jbc.REV120.013930_bib167) 2007; 81 Amara (10.1074/jbc.REV120.013930_bib261) 2015; 13 Zou (10.1074/jbc.REV120.013930_bib283) 2020; 382 Zhou (10.1074/jbc.REV120.013930_bib221) 2020; 395 Blau (10.1074/jbc.REV120.013930_bib20) 2001; 75 Sawicki (10.1074/jbc.REV120.013930_bib89) 1986; 57 Ying (10.1074/jbc.REV120.013930_bib265) 2016; 213 Pan (10.1074/jbc.REV120.013930_bib296) 2008; 3 Masters (10.1074/jbc.REV120.013930_bib172) 2019; 537 Ivanov (10.1074/jbc.REV120.013930_bib108) 2004; 78 Cheng (10.1074/jbc.REV120.013930_bib38) 2019; 11 Miknis (10.1074/jbc.REV120.013930_bib103) 2009; 83 Snijder (10.1074/jbc.REV120.013930_bib155) 2020; 18 Sawicki (10.1074/jbc.REV120.013930_bib70) 2005; 287 Varshney (10.1074/jbc.REV120.013930_bib249) 2011; 50 DeDiego (10.1074/jbc.REV120.013930_bib269) 2011; 7 Mateos-Gómez (10.1074/jbc.REV120.013930_bib84) 2013; 87 Nal (10.1074/jbc.REV120.013930_bib305) 2005; 86 Di (10.1074/jbc.REV120.013930_bib82) 2017; 114 Graham (10.1074/jbc.REV120.013930_bib118) 2012; 18 Hurst (10.1074/jbc.REV120.013930_bib308) 2009; 83 Tian (10.1074/jbc.REV120.013930_bib287) 2020; 9 Bolles (10.1074/jbc.REV120.013930_bib294) 2011; 85 Brunn, von (10.1074/jbc.REV120.013930_bib295) 2007; 2 Shirato (10.1074/jbc.REV120.013930_bib19) 2013; 87 Haijema (10.1074/jbc.REV120.013930_bib177) 2004; 78 Park (10.1074/jbc.REV120.013930_bib56) 2011; 133 Lei (10.1074/jbc.REV120.013930_bib309) 2018; 149 Mielech (10.1074/jbc.REV120.013930_bib64) 2014; 450–451 Menachery (10.1074/jbc.REV120.013930_bib210) 2014; 5 Tang (10.1074/jbc.REV120.013930_bib292) 2011; 186 Baric (10.1074/jbc.REV120.013930_bib173) 1988; 62 Millet (10.1074/jbc.REV120.013930_bib13) 2014; 111 Franks (10.1074/jbc.REV120.013930_bib217) 2003; 34 Gordon (10.1074/jbc.REV120.013930_bib141) 2020; 295 Xiao (10.1074/jbc.REV120.013930_bib121) 2017; 22 DeDiego (10.1074/jbc.REV120.013930_bib302) 2007; 81 Plant (10.1074/jbc.REV120.013930_bib53) 2013; 5 Smith (10.1074/jbc.REV120.013930_bib117) 2015; 89 Opstelten (10.1074/jbc.REV120.013930_bib162) 1995; 131 Hussain (10.1074/jbc.REV120.013930_bib322) 2010; 153 Bouvet (10.1074/jbc.REV120.013930_bib116) 2012; 109 He (10.1074/jbc.REV120.013930_bib2) 2014; 88 Tan (10.1074/jbc.REV120.013930_bib21) 2002; 21 Gordon (10.1074/jbc.REV120.013930_bib142) 2020; 295 Chen (10.1074/jbc.REV120.013930_bib319) 2011; 7 Wathelet (10.1074/jbc.REV120.013930_bib201) 2007; 81 Cheng (10.1074/jbc.REV120.013930_bib289) 2005; 24 Narayanan (10.1074/jbc.REV120.013930_bib175) 2003; 77 Follis (10.1074/jbc.REV120.013930_bib39) 2006; 350 Nguyen (10.1074/jbc.REV120.013930_bib161) 1997; 71 Adedeji (10.1074/jbc.REV120.013930_bib105) 2012; 7 Morrison (10.1074/jbc.REV120.013930_bib243) 2012; 4 Abernathy (10.1074/jbc.REV120.013930_bib194) 2015; 479–480 Hagemeijer (10.1074/jbc.REV120.013930_bib69) 2014; 458-459 Smith (10.1074/jbc.REV120.013930_bib115) 2013; 9 Huang (10.1074/jbc.REV120.013930_bib220) 2020; 395 Kopecky-Bromberg (10.1074/jbc.REV120.013930_bib205) 2006; 80 Surjit (10.1074/jbc.REV120.013930_bib254) 2004; 383 Lundin (10.1074/jbc.REV120.013930_bib151) 2014; 10 Lai (10.1074/jbc.REV120.013930_bib75) 1982; 41 Ulasli (10.1074/jbc.REV120.013930_bib150) 2010; 12 Lontok (10.1074/jbc.REV120.013930_bib165) 2004; 78 Fosmire (10.1074/jbc.REV120.013930_bib170) 1992; 66 Imbert (10.1074/jbc.REV120.013930_bib297) 2008; 133 Inoue (10.1074/jbc.REV120.013930_bib26) 2007; 81 Wu (10.1074/jbc.REV120.013930_bib100) 2013; 8 Ludwicka-Bradley (10.1074/jbc.REV120.013930_bib219) 2011; 41 Chu (10.1074/jbc.REV120.013930_bib266) 2016; 213 de Haan (10.1074/jbc.REV120.013930_bib176) 2002; 296 Narayanan (10.1074/jbc.REV120.013930_bib196) 2008; 82 Agostini (10.1074/jbc.REV120.013930_bib140) 2018; 9 Agostini (10.1074/jbc.REV120.013930_bib144) 2019; 93 Schwegmann-Wessels (10.1074/jbc.REV120.013930_bib166) 2004; 279 Moreno (10.1074/jbc.REV120.013930_bib83) 2008; 82 Züst (10.1074/jbc.REV120.013930_bib235) 2007; 3 Tsoi (10.1074/jbc.REV120.013930_bib268) 2014; 464 Tanaka (10.1074/jbc.REV120.013930_bib197) 2012; 86 Gu (10.1074/jbc.REV120.013930_bib262) 2007; 170 Li (10.1074/jbc.REV120.013930_bib8) 2003; 426 Zhou (10.1074/jbc.REV120.013930_bib27) 2016; 291 Subissi (10.1074/jbc.REV120.013930_bib91) 2014; 111 Gralinski (10.1074/jbc.REV120.013930_bib212) 2015; 235 Serrano (10.1074/jbc.REV120.013930_bib310) 2009; 83 Gaucherand (10.1074/jbc.REV120.013930_bib200) 2019; 27 Kopecky-Bromberg (10.1074/jbc.REV120.013930_bib232) 2007; 81 Stobart (10.1074/jbc.REV120.013930_bib313) 2013; 87 Law (10.1074/jbc.REV120.013930_bib326) 2006; 580 Jiménez-Guardeño (10.1074/jbc.REV120.013930_bib253) 2014; 10 Mantlo (10.1074/jbc.REV120.013930_bib225) 2020; 179 Neuman (10.1074/jbc.REV120.013930_bib304) 2011; 174 McCray (10.1074/jbc.REV120.013930_bib213) 2007; 81 Irigoyen (10.1074/jbc.REV120.013930_bib51) 2016; 12 Smith (10.1074/jbc.REV120.013930_bib90) 2014; 1 Goldman (10.1074/jbc.REV120.013930_bib247) 2014; 4 Wang (10.1074/jbc.REV120.013930_bib288) 2020; 11 Escors (10.1074/jbc.REV120.013930_bib169) 2003; 77 Vignuzzi (10.1074/jbc.REV120.013930_bib120) 2008; 14 Haagmans (10.1074/jbc.REV120.013930_bib224) 2004; 10 Yeh (10.1074/jbc.REV120.013930_bib291) 2005; 56 Plant (10.1074/jbc.REV120.013930_bib55) 2008; 13 Tan (10.1074/jbc.REV120.013930_bib272) 2004; 78 Marceau (10.1074/jbc.REV120.013930_bib104) 2012; 922 Schmidt (10.1074/jbc.REV120.013930_bib226) 2009; 106 Lan (10.1074/jbc.REV120.013930_bib34) 2020; 581 Collins (10.1074/jbc.REV120.013930_bib263) 2002; 9 Gordon (10.1074/jbc.REV120.013930_bib137) 2020; 583 Sung (10.1074/jbc.REV120.013930_bib325) 2009; 387 Matsuyama (10.1074/jbc.REV120.013930_bib11) 2010; 84 Blanco-Melo (10.1074/jbc.REV120.013930_bib222) 2020; 181 Sola (10.1074/jbc.REV120.013930_bib76) 2015; 2 Wu (10.1074/jbc.REV120.013930_bib188) 2020; 579 Adedeji (10.1074/jbc.REV120.013930_bib145) 2012; 56 Gao (10.1074/jbc.REV120.013930_bib93) 2020; 368 Venkatagopalan (10.1074/jbc.REV120.013930_bib164) 2015; 478 Wu (10.1074/jbc.REV120.013930_bib45) 2020; 368 Xia (10.1074/jbc.REV120.013930_bib46) 2020; 30 Decroly (10.1074/jbc.REV120.013930_bib131) 2011; 7 Lokugamage (10.1074/jbc.REV120.013930_bib190) 2020 Sharma (10.1074/jbc.REV120.013930_bib276) 2011; 6 Shang (10.1074/jbc.REV120.013930_bib29) 2020; 117 Su (10.1074/jbc.REV120.013930_bib122) 2016; 24 Roth-Cross (10.1074/jbc.REV120.013930_bib238) 2009; 83 Shi (10.1074/jbc.REV120.013930_bib320) 2019; 265 Padhan (10.1074/jbc.REV120.013930_bib271) 2008; 89 Nieto-Torres (10.1074/jbc.REV120.013930_bib301) 2011; 415 Su (10.1074/jbc.REV120.013930_bib193) 2020; 11 Temperton (10.1074/jbc.REV120.013930_bib280) 2005; 11 Subissi (10.1074/jbc.REV120.013930_bib138) 2014; 101 Lehmann (10.1074/jbc.REV120.013930_bib107) 2015; 202 van Hemert (10.1074/jbc.REV120.013930_bib152) 2008; 4 Law (10.1074/jbc.REV120.013930_bib206) 2005; 106 Hyde (10.1074/jbc.REV120.013930_bib126) 2015; 479–480 Cencic (10.1074/jbc.REV120.013930_bib136) 2011; 85 Tan (10.1074/jbc.REV120.013930_bib273) 2007; 81 Siu (10.1074/jbc.REV120.013930_bib3) 2008; 82 Yang (10.1074/jbc.REV120.013930_bib264) 2005; 392 Wrapp (10.1074/jbc.REV120.013930_bib33) 2020; 367 Narayanan (10.1074/jbc.REV120.013930_bib187) 2008; 133 Roth-Cross (10.1074/jbc.REV120.013930_bib228) 2008; 82 Soo (10.1074/jbc.REV120.013930_bib290) 2004; 10 Chang (10.1074/jbc.REV120.013930_bib306) 2006; 13 Khan (10.1074/jbc.REV120.013930_bib259) 2006; 122 Plant (10.1074/jbc.REV120.013930_bib54) 2010; 84 Eckerle (10.1074/jbc.REV120.013930_bib113) 2007; 81 Benedict (10.1074/jbc.REV120.013930_bib260) 2002; 3 Báez-Santos (10.1074/jbc.REV120.013930_bib65) 2015; 115 de Haan (10.1074/jbc.REV120.013930_bib15) 2004; 78 Hao (10.1074/jbc.REV120.013930_bib109) 2017; 13 Hussain (10.1074/jbc.REV120.013930_bib324) 2008; 82 Hoffmann (10.1074/jbc.REV120.013930_bib6) 2020; 181 Smith (10.1074/jbc.REV120.013930_bib111) 2013; 9 Chen (10.1074/jbc.REV120.013930_bib171) 2007; 81 Angelini (10.1074/jbc.REV120.013930_bib67) 2013; 4 Ireland (10.1074/jbc.REV120.013930_bib215) 2008; 82 Zhao (10.1074/jbc.REV120.013930_bib239) 2012; 11 Di (10.1074/jbc.REV120.013930_bib80) 2018; 517 Tay (10.1074/jbc.REV120.013930_bib44) 2020; 20 Kim (10.1074/jbc.REV120.013930_bib48) 2020; 38 Wu (10.1074/jbc.REV120.013930_bib86) 2014; 16 Pewe (10.1074/jbc.REV120.013930_bib236) 2005; 79 Ferron (10.1074/jbc.REV120.013930_bib146) 2012; 96 Grossoehme (10.1074/jbc.REV120.013930_bib87) 2009; 394 Marra (10.1074/jbc.REV120.013930_bib183) 2003; 300 Zhu (10.1074/jbc.REV120.013930_bib314) 2017; 91 Cannalire (10.1074/jbc.REV120.013930_bib143) 2018; 143 Frana (10.1074/jbc.REV120.013930_bib14) 1985; 56 Siu (10.1074/jbc.REV120.013930_bib233) 2009; 284 Qian (10.1074/jbc.REV120.013930_bib16) 2013; 8 Beachboard (10.1074/jbc.REV120.013930_bib312) 2015; 89 Kumar (10.1074/jbc.REV120.013930_bib61) 2017; 141 Yue (10.1074/jbc.REV120.013930_bib258) 2018; 9 Narayanan (10.1074/jbc.REV120.013930_bib160) 2000; 74 Devaraj (10.1074/jbc.REV120.013930_bib230) 2007; 282 DeDiego (10.1074/jbc.REV120.013930_bib255) 2014; 88 Wang (10.1074/jbc.REV120.01 |
References_xml | – volume: 96 start-page: 59 year: 2016 end-page: 126 ident: bib298 article-title: The nonstructural proteins directing coronavirus RNA synthesis and processing publication-title: Adv. Virus. Res – volume: 9 start-page: e00218 year: 2018 end-page: e00221 ident: bib140 article-title: Coronavirus susceptibility to the antiviral remdesivir (GS-5734) is mediated by the viral polymerase and the proofreading exoribonuclease publication-title: mBio – volume: 82 start-page: 300 year: 2008 end-page: 310 ident: bib215 article-title: Type I interferons are essential in controlling neurotropic coronavirus infection irrespective of functional CD8 T cells publication-title: J. Virol – volume: 3 start-page: 237 year: 2016 end-page: 261 ident: bib4 article-title: Structure, function, and evolution of coronavirus spike proteins publication-title: Annu. Rev. Virol – volume: 21 start-page: 2076 year: 2002 end-page: 2086 ident: bib21 article-title: Crystal structure of murine sCEACAM1a[1,4]: a coronavirus receptor in the CEA family publication-title: EMBO J – volume: 581 start-page: 215 year: 2020 end-page: 220 ident: bib34 article-title: Structure of the SARS-CoV-2 spike receptor-binding domain bound to the ACE2 receptor publication-title: Nature – volume: 131 start-page: 339 year: 1995 end-page: 349 ident: bib162 article-title: Envelope glycoprotein interactions in coronavirus assembly publication-title: J. Cell Biol – volume: 85 start-page: 4122 year: 2011 end-page: 4134 ident: bib10 article-title: Evidence that TMPRSS2 activates the severe acute respiratory syndrome coronavirus spike protein for membrane fusion and reduces viral control by the humoral immune response publication-title: J. Virol – volume: 89 start-page: 1960 year: 2008 end-page: 1969 ident: bib271 article-title: Severe acute respiratory syndrome coronavirus 3a protein activates the mitochondrial death pathway through p38 MAP kinase activation publication-title: J. Gen. Virol – volume: 579 start-page: 265 year: 2020 end-page: 269 ident: bib188 article-title: A new coronavirus associated with human respiratory disease in China publication-title: Nature – volume: 479–480 start-page: 66 year: 2015 end-page: 74 ident: bib126 article-title: Innate immune restriction and antagonism of viral RNA lacking 2′- publication-title: Virology – volume: 13 start-page: 4873 year: 2008 end-page: 4881 ident: bib55 article-title: The role of programmed-1 ribosomal frameshifting in coronavirus propagation publication-title: Front. Biosci – volume: 85 start-page: 6381 year: 2011 end-page: 6389 ident: bib136 article-title: Blocking eIF4E-eIF4G interaction as a strategy to impair coronavirus replication publication-title: J. Virol – volume: 8 start-page: e01503 year: 2017 end-page: e01517 ident: bib119 article-title: Proofreading-deficient coronaviruses adapt for increased fitness over long-term passage without reversion of exoribonuclease-inactivating mutations publication-title: mBio – volume: 89 start-page: 10970 year: 2015 end-page: 10981 ident: bib203 article-title: Middle East respiratory syndrome coronavirus nsp1 inhibits host gene expression by selectively targeting mRNAs transcribed in the nucleus while sparing mRNAs of cytoplasmic origin publication-title: J. Virol – volume: 12 start-page: e1005473 year: 2016 ident: bib51 article-title: High-resolution analysis of coronavirus gene expression by RNA sequencing and ribosome profiling publication-title: PLoS Pathog – volume: 3 start-page: 1013 year: 2002 end-page: 1018 ident: bib260 article-title: To kill or be killed: viral evasion of apoptosis publication-title: Nat. Immunol – volume: 426 start-page: 450 year: 2003 end-page: 454 ident: bib8 article-title: Angiotensin-converting enzyme 2 is a functional receptor for the SARS coronavirus publication-title: Nature – volume: 94 year: 2020 ident: bib32 article-title: Receptor recognition by the novel coronavirus from Wuhan: an analysis based on decade-long structural studies of SARS coronavirus publication-title: J. Virol – volume: 583 start-page: 459 year: 2020 end-page: 468 ident: bib137 article-title: A SARS-CoV-2 protein interaction map reveals targets for drug repurposing publication-title: Nature – volume: 141 start-page: 101 year: 2017 end-page: 106 ident: bib61 article-title: Identification and evaluation of potent Middle East respiratory syndrome coronavirus (MERS-CoV) 3CLPro inhibitors publication-title: Antiviral Res – volume: 362 start-page: 293 year: 2003 end-page: 294 ident: bib223 article-title: Treatment of SARS with human interferons publication-title: Lancet – volume: 235 start-page: 1 year: 1997 end-page: 9 ident: bib123 article-title: New insights into the mechanisms of RNA recombination publication-title: Virology – volume: 79 start-page: 2506 year: 2005 end-page: 2516 ident: bib77 article-title: Role of nucleotides immediately flanking the transcription-regulating sequence core in coronavirus subgenomic mRNA synthesis publication-title: J. Virol – volume: 111 start-page: 15214 year: 2014 end-page: 15219 ident: bib13 article-title: Host cell entry of Middle East respiratory syndrome coronavirus after two-step, furin-mediated activation of the spike protein publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 26 start-page: 450 year: 2020 end-page: 452 ident: bib31 article-title: The proximal origin of SARS-CoV-2 publication-title: Nat. Med – volume: 190 start-page: 1119 year: 2004 end-page: 1126 ident: bib279 article-title: Neutralizing antibodies in patients with severe acute respiratory syndrome-associated coronavirus infection publication-title: J. Infect. Dis – volume: 295 start-page: 4773 year: 2020 end-page: 4779 ident: bib141 article-title: The antiviral compound remdesivir potently inhibits RNA-dependent RNA polymerase from Middle East respiratory syndrome coronavirus publication-title: J. Biol. Chem – volume: 27 start-page: 325 year: 2020 end-page: 328 ident: bib189 article-title: Genome composition and divergence of the novel coronavirus (2019-nCoV) originating in China publication-title: Cell Host Microbe – volume: 196 start-page: 405 year: 2007 end-page: 415 ident: bib275 article-title: Open reading frame 8a of the human severe acute respiratory syndrome coronavirus not only promotes viral replication but also induces apoptosis publication-title: J. Infect. Dis – volume: 1 start-page: 111 year: 2014 end-page: 132 ident: bib90 article-title: Thinking outside the triangle: replication fidelity of the largest RNA viruses publication-title: Annu. Rev. Virol – volume: 81 start-page: 548 year: 2007 end-page: 557 ident: bib232 article-title: Severe acute respiratory syndrome coronavirus open reading frame (ORF) 3b, ORF 6, and nucleocapsid proteins function as interferon antagonists publication-title: J. Virol – volume: 103 start-page: 5108 year: 2006 end-page: 5113 ident: bib112 article-title: Discovery of an RNA virus 3′→5′ exoribonuclease that is critically involved in coronavirus RNA synthesis publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 361 start-page: 243 year: 2006 end-page: 256 ident: bib316 article-title: RNA recognition and cleavage by the SARS coronavirus endoribonuclease publication-title: J. Mol. Biol – volume: 287 start-page: 1 year: 2005 end-page: 30 ident: bib50 article-title: Coronavirus genome structure and replication publication-title: Curr. Top. Microbiol. Immunol – volume: 57 start-page: 328 year: 1986 end-page: 334 ident: bib89 article-title: Coronavirus minus-strand RNA synthesis and effect of cycloheximide on coronavirus RNA synthesis publication-title: J. Virol – volume: 103 start-page: 12885 year: 2006 end-page: 12890 ident: bib195 article-title: Severe acute respiratory syndrome coronavirus nsp1 protein suppresses host gene expression by promoting host mRNA degradation publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 6 start-page: e1000863 year: 2010 ident: bib130 article-title: reconstitution of SARS-coronavirus mRNA cap methylation publication-title: PLoS Pathog – volume: 7 start-page: 1040 year: 2013 end-page: 1047 ident: bib211 article-title: Epidemiological and clinical features of human coronavirus infections among different subsets of patients publication-title: Influenza Other Respir. Viruses – volume: 11 start-page: 2251 year: 2020 end-page: 2256 ident: bib288 article-title: A human monoclonal antibody blocking SARS-CoV-2 infection publication-title: Nat. Commun – volume: 4 start-page: 26 year: 2016 ident: bib244 article-title: Human coronaviruses: a review of virus-host interactions publication-title: Diseases – year: 2020 ident: bib125 article-title: The coronavirus proofreading exoribonuclease mediates extensive viral recombination publication-title: bioRxiv – volume: 85 start-page: 12201 year: 2011 end-page: 12215 ident: bib294 article-title: A double-inactivated severe acute respiratory syndrome coronavirus vaccine provides incomplete protection in mice and induces increased eosinophilic proinflammatory pulmonary response upon challenge publication-title: J. Virol – volume: 311 start-page: 870 year: 2003 end-page: 876 ident: bib252 article-title: Activation of AP-1 signal transduction pathway by SARS coronavirus nucleocapsid protein publication-title: Biochem. Biophys. Res. Commun – volume: 78 start-page: 12557 year: 2004 end-page: 12565 ident: bib158 article-title: Generation of synthetic severe acute respiratory syndrome coronavirus pseudoparticles: implications for assembly and vaccine production publication-title: J. Virol – volume: 279 start-page: 43661 year: 2004 end-page: 43666 ident: bib166 article-title: A novel sorting signal for intracellular localization is present in the S protein of a porcine coronavirus but absent from severe acute respiratory syndrome-associated coronavirus publication-title: J. Biol. Chem – volume: 300 start-page: 1394 year: 2003 end-page: 1399 ident: bib184 article-title: Characterization of a novel coronavirus associated with severe acute respiratory syndrome publication-title: Science – volume: 93 start-page: 494 year: 2012 end-page: 503 ident: bib216 article-title: Infection of human alveolar macrophages by human coronavirus strain 229E publication-title: J. Gen. Virol – volume: 79 start-page: 14909 year: 2005 end-page: 14922 ident: bib178 article-title: Severe acute respiratory syndrome coronavirus group-specific open reading frames encode nonessential functions for replication in cell cultures and mice publication-title: J. Virol – volume: 84 start-page: 4619 year: 2010 end-page: 4629 ident: bib63 article-title: Deubiquitinating and interferon antagonism activities of coronavirus papain-like proteases publication-title: J. Virol – volume: 367 start-page: 1260 year: 2020 end-page: 1263 ident: bib33 article-title: Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation publication-title: Science – volume: 150 start-page: 123 year: 2018 end-page: 129 ident: bib135 article-title: Broad-spectrum antiviral activity of the eIF4A inhibitor silvestrol against corona- and picornaviruses publication-title: Antiviral Res – volume: 21 start-page: 1586 year: 2007 end-page: 1596 ident: bib248 article-title: Spike protein of SARS-CoV stimulates cyclooxygenase-2 expression via both calcium-dependent and calcium-independent protein kinase C pathways publication-title: FASEB J – volume: 81 start-page: 20 year: 2007 end-page: 29 ident: bib79 article-title: A contemporary view of coronavirus transcription publication-title: J. Virol – volume: 309 start-page: 1864 year: 2005 end-page: 1868 ident: bib286 article-title: Structure of SARS coronavirus spike receptor-binding domain complexed with receptor publication-title: Science – volume: 286 start-page: 3222 year: 2019 end-page: 3239 ident: bib74 article-title: Interaction of coronavirus nucleocapsid protein with the 5′- and 3′- ends of the coronavirus genome is involved in genome circularization and negative-strand RNA synthesis publication-title: FEBS J – volume: 78 start-page: 5619 year: 2004 end-page: 5632 ident: bib108 article-title: Multiple enzymatic activities associated with severe acute respiratory syndrome coronavirus helicase publication-title: J. Virol – volume: 56 start-page: 4718 year: 2012 end-page: 4728 ident: bib145 article-title: Severe acute respiratory syndrome coronavirus replication inhibitor that interferes with the nucleic acid unwinding of the viral helicase publication-title: Antimicrob. Agents Chemother – volume: 3 start-page: e3299 year: 2008 ident: bib296 article-title: Genome-wide analysis of protein-protein interactions and involvement of viral proteins in SARS-CoV replication publication-title: PLoS ONE – volume: 77 start-page: 4597 year: 2003 end-page: 4608 ident: bib303 article-title: The small envelope protein E is not essential for murine coronavirus replication publication-title: J. Virol – volume: 4 start-page: 280 year: 2014 end-page: 288 ident: bib247 article-title: Pleiotropic effects of interleukin-6 in a “two-hit” murine model of acute respiratory distress syndrome publication-title: Pulm. Circ – volume: 83 start-page: 7221 year: 2009 end-page: 7234 ident: bib308 article-title: Identification of publication-title: J. Virol – volume: 8 start-page: e76469 year: 2013 ident: bib16 article-title: Role of the spike glycoprotein of human Middle East respiratory syndrome coronavirus (MERS-CoV) in virus entry and syncytia formation publication-title: PLoS ONE – volume: 86 start-page: 13598 year: 2012 end-page: 13608 ident: bib202 article-title: Severe acute respiratory syndrome coronavirus protein nsp1 is a novel eukaryotic translation inhibitor that represses multiple steps of translation initiation publication-title: J. Virol – volume: 14 start-page: 154 year: 2008 end-page: 161 ident: bib120 article-title: Engineering attenuated virus vaccines by controlling replication fidelity publication-title: Nat. Med – volume: 213 start-page: 904 year: 2016 end-page: 914 ident: bib266 article-title: Middle East respiratory syndrome coronavirus efficiently infects human primary T lymphocytes and activates the extrinsic and intrinsic apoptosis pathways publication-title: J. Infect. Dis – volume: 142 start-page: 19 year: 2009 end-page: 27 ident: bib251 article-title: SARS coronavirus spike protein-induced innate immune response occurs via activation of the NF-κB pathway in human monocyte macrophages publication-title: Virus Res – volume: 11 start-page: 411 year: 2005 end-page: 416 ident: bib280 article-title: Longitudinally profiling neutralizing antibody response to SARS coronavirus with pseudotypes publication-title: Emerg. Infect. Dis – volume: 13 start-page: 59 year: 2006 end-page: 72 ident: bib306 article-title: Modular organization of SARS coronavirus nucleocapsid protein publication-title: J. Biomed. Sci – volume: 82 start-page: 11318 year: 2008 end-page: 11330 ident: bib3 article-title: The M, E, and N structural proteins of the severe acute respiratory syndrome coronavirus are required for efficient assembly, trafficking, and release of virus-like particles publication-title: J. Virol – volume: 5 start-page: e01114 year: 2014 end-page: e01174 ident: bib210 article-title: Pathogenic influenza viruses and coronaviruses utilize similar and contrasting approaches to control interferon-stimulated gene responses publication-title: mBio – volume: 81 start-page: 813 year: 2007 end-page: 821 ident: bib213 article-title: Lethal infection of K18-hACE2 mice infected with severe acute respiratory syndrome coronavirus publication-title: J. Virol – volume: 458-459 start-page: 125 year: 2014 end-page: 135 ident: bib69 article-title: Membrane rearrangements mediated by coronavirus nonstructural proteins 3 and 4 publication-title: Virology – volume: 27 start-page: 992 year: 2020 end-page: 1000.e3 ident: bib246 article-title: Complex immune dysregulation in COVID-19 patients with severe respiratory failure publication-title: Cell Host Microbe – volume: 6 start-page: e226 year: 2008 ident: bib66 article-title: SARS-coronavirus replication is supported by a reticulovesicular network of modified endoplasmic reticulum publication-title: PLoS Biol – volume: 64 start-page: 6045 year: 1990 end-page: 6053 ident: bib168 article-title: Analysis of efficiently packaged defective interfering RNAs of murine coronavirus: localization of a possible RNA-packaging signal publication-title: J. Virol – volume: 84 start-page: 12658 year: 2010 end-page: 12664 ident: bib11 article-title: Efficient activation of the severe acute respiratory syndrome coronavirus spike protein by the transmembrane protease TMPRSS2 publication-title: J. Virol – volume: 77 start-page: 7890 year: 2003 end-page: 7902 ident: bib169 article-title: Transmissible gastroenteritis coronavirus packaging signal is located at the 5′ end of the virus genome publication-title: J. Virol – volume: 102 start-page: 11876 year: 2005 end-page: 11881 ident: bib24 article-title: Inhibitors of cathepsin L prevent severe acute respiratory syndrome coronavirus entry publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 767 start-page: 17 year: 2013 end-page: 46 ident: bib110 article-title: Structure and mechanisms of SF1 DNA helicases publication-title: Adv. Exp. Med. Biol – volume: 83 start-page: 3743 year: 2009 end-page: 3753 ident: bib238 article-title: Organ-specific attenuation of murine hepatitis virus strain A59 by replacement of catalytic residues in the putative viral cyclic phosphodiesterase ns2 publication-title: J. Virol – volume: 85 start-page: 4572 year: 2011 end-page: 4577 ident: bib68 article-title: Mobility and interactions of coronavirus nonstructural protein 4 publication-title: J. Virol – volume: 111 start-page: E3900 year: 2014 end-page: E3909 ident: bib91 article-title: One severe acute respiratory syndrome coronavirus protein complex integrates processive RNA polymerase and exonuclease activities publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 350 start-page: 358 year: 2006 end-page: 369 ident: bib39 article-title: Furin cleavage of the SARS coronavirus spike glycoprotein enhances cell-cell fusion but does not affect virion entry publication-title: Virology – volume: 296 start-page: 177 year: 2002 end-page: 189 ident: bib176 article-title: The group-specific murine coronavirus genes are not essential, but their deletion, by reverse genetics, is attenuating in the natural host publication-title: Virology – volume: 382 start-page: 1177 year: 2020 end-page: 1179 ident: bib283 article-title: SARS-CoV-2 viral load in upper respiratory specimens of infected patients publication-title: N. Engl. J. Med – volume: 79 start-page: 11335 year: 2005 end-page: 11342 ident: bib236 article-title: A severe acute respiratory syndrome-associated coronavirus-specific protein enhances virulence of an attenuated murine coronavirus publication-title: J. Virol – volume: 101 start-page: 3792 year: 2004 end-page: 3796 ident: bib101 article-title: The severe acute respiratory syndrome-coronavirus replicative protein nsp9 is a single-stranded RNA-binding subunit unique in the RNA virus world publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 8 start-page: e70548 year: 2013 ident: bib100 article-title: Regulation of coronaviral poly(A) tail length during infection publication-title: PLoS ONE – volume: 16 start-page: 249 year: 2012 end-page: 258 ident: bib58 article-title: Targeting frameshifting in the human immunodeficiency virus publication-title: Expert Opin. Ther. Targets – volume: 7 start-page: e00212 year: 2016 end-page: e00258 ident: bib237 article-title: Middle East respiratory syndrome coronavirus NS4b protein inhibits host RNase L activation publication-title: mBio – volume: 494 start-page: 83 year: 2001 end-page: 89 ident: bib179 article-title: Analysis of nonessential gene function in recombinant MHV-JHM. Gene 4 knockout recombinant virus publication-title: Adv. Exp. Med. Biol – volume: 91 start-page: 14 year: 2017 end-page: 51 ident: bib314 article-title: Porcine deltacoronavirus nsp5 antagonizes type I interferon signaling by cleaving STAT2 publication-title: J. Virol – volume: 133 start-page: 113 year: 2008 end-page: 121 ident: bib187 article-title: SARS coronavirus accessory proteins publication-title: Virus Res – volume: 84 start-page: 7703 year: 2010 end-page: 7712 ident: bib256 article-title: Upregulation of the chemokine (C-C motif) ligand 2 via a severe acute respiratory syndrome coronavirus spike-ACE2 signaling pathway publication-title: J. Virol – volume: 7 start-page: e1002294 year: 2011 ident: bib319 article-title: Biochemical and structural insights into the mechanisms of SARS coronavirus RNA ribose 2′- publication-title: PLoS Pathog – volume: 153 start-page: 299 year: 2010 end-page: 304 ident: bib322 article-title: SARS-coronavirus protein 6 conformations required to impede protein import into the nucleus publication-title: Virus Res – volume: 18 start-page: 1825 year: 1990 end-page: 1832 ident: bib52 article-title: The primary structure and expression of the second open reading frame of the polymerase gene of the coronavirus MHV-A59; a highly conserved polymerase is expressed by an efficient ribosomal frameshifting mechanism publication-title: Nucleic Acids Res – volume: 330 start-page: 322 year: 2004 end-page: 331 ident: bib163 article-title: SARS coronavirus E protein forms cation-selective ion channels publication-title: Virology – volume: 78 start-page: 3863 year: 2004 end-page: 3871 ident: bib177 article-title: Live, attenuated coronavirus vaccines through the directed deletion of group-specific genes provide protection against feline infectious peritonitis publication-title: J. Virol – volume: 78 start-page: 779 year: 2020 end-page: 784.e5 ident: bib37 article-title: A multibasic cleavage site in the spike protein of SARS-CoV-2 is essential for infection of human lung cells publication-title: Mol. Cell – volume: 87 start-page: 177 year: 2013 end-page: 186 ident: bib84 article-title: Long-distance RNA-RNA interactions in the coronavirus genome form high-order structures promoting discontinuous RNA synthesis during transcription publication-title: J. Virol – volume: 20 start-page: 363 year: 2020 end-page: 374 ident: bib44 article-title: The trinity of COVID-19: immunity, inflammation and intervention publication-title: Nat. Rev. Immunol – volume: 47 start-page: 6538 year: 2019 end-page: 6550 ident: bib106 article-title: Delicate structural coordination of the severe acute respiratory syndrome coronavirus Nsp13 upon ATP hydrolysis publication-title: Nucleic Acids Res – volume: 179 start-page: 104811 year: 2020 ident: bib225 article-title: Antiviral activities of type I interferons to SARS-CoV-2 infection publication-title: Antiviral Res – volume: 392 start-page: 135 year: 2005 end-page: 143 ident: bib264 article-title: Bcl-xL inhibits T-cell apoptosis induced by expression of SARS coronavirus E protein in the absence of growth factors publication-title: Biochem. J – year: 2020 ident: bib1 article-title: Coronavirus infections—more than just the common cold publication-title: JAMA – volume: 81 start-page: 8722 year: 2007 end-page: 8729 ident: bib26 article-title: Clathrin-dependent entry of severe acute respiratory syndrome coronavirus into target cells expressing ACE2 with the cytoplasmic tail deleted publication-title: J. Virol – volume: 28 start-page: 19 year: 2009 end-page: 38 ident: bib41 article-title: History of highly pathogenic avian influenza publication-title: Rev. Sci. Tech – volume: 81 start-page: 9812 year: 2007 end-page: 9824 ident: bib234 article-title: Severe acute respiratory syndrome coronavirus ORF6 antagonizes STAT1 function by sequestering nuclear import factors on the rough endoplasmic reticulum/Golgi membrane publication-title: J. Virol – volume: 106 start-page: 12067 year: 2009 end-page: 12072 ident: bib226 article-title: 5′-Triphosphate RNA requires base-paired structures to activate antiviral signaling via RIG-I publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 16 start-page: 1134 year: 2009 end-page: 1140 ident: bib204 article-title: A two-pronged strategy to suppress host protein synthesis by SARS coronavirus Nsp1 protein publication-title: Nat. Struct. Mol. Biol – volume: 157 start-page: 2095 year: 2012 end-page: 2104 ident: bib95 article-title: Biochemical characterization of a recombinant SARS coronavirus nsp12 RNA-dependent RNA polymerase capable of copying viral RNA templates publication-title: Arch. Virol – volume: 39 start-page: 1071 year: 2004 end-page: 1075 ident: bib245 article-title: Temporal relationship of viral load, ribavirin, interleukin (IL)-6, IL-8, and clinical progression in patients with severe acute respiratory syndrome publication-title: Clin. Infect. Dis – volume: 10 start-page: 1814 year: 2019 end-page: 1816 ident: bib240 article-title: Antagonism of dsRNA-induced innate immune pathways by NS4a and NS4b accessory proteins during MERS coronavirus infection publication-title: mBio – volume: 64 start-page: 5367 year: 1990 end-page: 5375 ident: bib299 article-title: Assembly of coronavirus spike protein into trimers and its role in epitope expression publication-title: J. Virol – volume: 62 start-page: 4280 year: 1988 end-page: 4287 ident: bib173 article-title: Interactions between coronavirus nucleocapsid protein and viral RNAs: implications for viral transcription publication-title: J. Virol – volume: 87 start-page: 1953 year: 2006 end-page: 1960 ident: bib207 article-title: Interaction of severe acute respiratory syndrome-associated coronavirus with dendritic cells publication-title: J. Gen. Virol – volume: 87 start-page: 5182 year: 2013 end-page: 5192 ident: bib159 article-title: Functional analysis of the murine coronavirus genomic RNA packaging signal publication-title: J. Virol – volume: 82 start-page: 4471 year: 2008 end-page: 4479 ident: bib196 article-title: Severe acute respiratory syndrome coronavirus nsp1 suppresses host gene expression, including that of type I interferon, in infected cells publication-title: J. Virol – volume: 10 start-page: 290 year: 2004 end-page: 293 ident: bib224 article-title: Pegylated interferon-α protects type 1 pneumocytes against SARS coronavirus infection in macaques publication-title: Nat. Med – volume: 143 start-page: 1667 year: 2018 end-page: 1676 ident: bib143 article-title: Functionalized 2,1-benzothiazine 2,2-dioxides as new inhibitors of Dengue NS5 RNA-dependent RNA polymerase publication-title: Eur. J. Med. Chem – volume: 27 start-page: 776 year: 2019 end-page: 791.e7 ident: bib200 article-title: The influenza A virus endoribonuclease PA-X usurps host mRNA processing machinery to limit host gene expression publication-title: Cell Rep – volume: 91 start-page: e02116 year: 2017 end-page: e02143 ident: bib229 article-title: The severe acute respiratory syndrome coronavirus nucleocapsid inhibits type I interferon production by interfering with TRIM25-mediated RIG-I ubiquitination publication-title: J. Virol – volume: 38 start-page: 623 year: 2020 end-page: 661 ident: bib48 article-title: The architecture of SARS-CoV-2 transcriptome publication-title: Cell – volume: 38 start-page: 203 year: 2010 end-page: 214 ident: bib94 article-title: The RNA polymerase activity of SARS-coronavirus nsp12 is primer dependent publication-title: Nucleic Acids Res – volume: 6 start-page: e19436 year: 2011 ident: bib276 article-title: SARS-CoV 9b protein diffuses into nucleus, undergoes active Crm1 mediated nucleocytoplasmic export and triggers apoptosis when retained in the nucleus publication-title: PLoS ONE – volume: 361 start-page: 18 year: 2007 end-page: 26 ident: bib242 article-title: Group 2 coronaviruses prevent immediate early interferon induction by protection of viral RNA from host cell recognition publication-title: Virology – volume: 26 start-page: 453 year: 2020 end-page: 455 ident: bib278 article-title: Breadth of concomitant immune responses prior to patient recovery: a case report of non-severe COVID-19 publication-title: Nat. Med – volume: 368 start-page: 409 year: 2020 end-page: 412 ident: bib60 article-title: Crystal structure of SARS-CoV-2 main protease provides a basis for design of improved α-ketoamide inhibitors publication-title: Science – volume: 186 start-page: 7264 year: 2011 end-page: 7268 ident: bib292 article-title: Lack of peripheral memory B cell responses in recovered patients with severe acute respiratory syndrome: a six-year follow-up study publication-title: J. Immunol – volume: 282 start-page: 32208 year: 2007 end-page: 32221 ident: bib230 article-title: Regulation of IRF-3-dependent innate immunity by the papain-like protease domain of the severe acute respiratory syndrome coronavirus publication-title: J. Biol. Chem – volume: 202 start-page: 12 year: 2015 end-page: 32 ident: bib107 article-title: What we know but do not understand about nidovirus helicases publication-title: Virus Res – volume: 10 start-page: 676 year: 2004 end-page: 678 ident: bib290 article-title: Retrospective comparison of convalescent plasma with continuing high-dose methylprednisolone treatment in SARS patients publication-title: Clin. Microbiol. Infect – volume: 89 start-page: 9029 year: 2015 end-page: 9043 ident: bib307 article-title: The nucleocapsid protein of coronaviruses acts as a viral suppressor of RNA silencing in mammalian cells publication-title: J. Virol – volume: 82 start-page: 9829 year: 2008 end-page: 9838 ident: bib228 article-title: Murine coronavirus mouse hepatitis virus is recognized by MDA5 and induces type I interferon in brain macrophages/microglia publication-title: J. Virol – volume: 18 start-page: 1820 year: 2012 end-page: 1826 ident: bib118 article-title: A live, impaired-fidelity coronavirus vaccine protects in an aged, immunocompromised mouse model of lethal disease publication-title: Nat. Med – volume: 1 start-page: 110 year: 2018 end-page: 179 ident: bib124 article-title: Evaluation of a recombination-resistant coronavirus as a broadly applicable, rapidly implementable vaccine platform publication-title: Commun. Biol – volume: 80 start-page: 296 year: 2006 end-page: 305 ident: bib181 article-title: Neither the RNA nor the proteins of open reading frames 3a and 3b of the coronavirus infectious bronchitis virus are essential for replication publication-title: J. Virol – volume: 75 start-page: 8173 year: 2001 end-page: 8186 ident: bib20 article-title: Targeted disruption of the Ceacam1 (MHVR) gene leads to reduced susceptibility of mice to mouse hepatitis virus infection publication-title: J. Virol – volume: 117 start-page: 17 year: 2006 end-page: 37 ident: bib49 article-title: Nidovirales: evolving the largest RNA virus genome publication-title: Virus Res – volume: 48 start-page: 1 year: 1997 end-page: 100 ident: bib185 article-title: The molecular biology of coronaviruses publication-title: Adv. Virus Res – volume: 18 start-page: 290 year: 2008 end-page: 301 ident: bib25 article-title: SARS coronavirus entry into host cells through a novel clathrin- and caveolae-independent endocytic pathway publication-title: Cell Res – volume: 96 start-page: 127 year: 2016 end-page: 163 ident: bib73 article-title: Coronavirus cis-acting RNA elements publication-title: Adv. Virus Res – volume: 78 start-page: 980 year: 2004 end-page: 994 ident: bib78 article-title: Sequence motifs involved in the regulation of discontinuous coronavirus subgenomic RNA synthesis publication-title: J. Virol – volume: 368 start-page: 948 year: 2020 end-page: 950 ident: bib47 article-title: A strategic approach to COVID-19 vaccine R&D publication-title: Science – volume: 395 start-page: 497 year: 2020 end-page: 506 ident: bib220 article-title: Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China publication-title: Lancet – volume: 10 start-page: e1004502 year: 2014 ident: bib22 article-title: Coronavirus cell entry occurs through the endo-/lysosomal pathway in a proteolysis-dependent manner publication-title: PLoS Pathog – volume: 79 start-page: 8065 year: 2005 end-page: 8078 ident: bib182 article-title: Gene 5 of the avian coronavirus infectious bronchitis virus is not essential for replication publication-title: J. Virol – volume: 300 start-page: 1763 year: 2003 end-page: 1767 ident: bib62 article-title: Coronavirus main proteinase (3CLpro) structure: basis for design of anti-SARS drugs publication-title: Science – volume: 9 start-page: 904 year: 2018 ident: bib258 article-title: SARS-coronavirus open reading frame-3a drives multimodal necrotic cell death publication-title: Cell Death Dis – volume: 83 start-page: 2368 year: 2009 end-page: 2373 ident: bib323 article-title: Severe acute respiratory syndrome coronavirus protein 6 is required for optimal replication publication-title: J. Virol – volume: 10 start-page: 320 year: 2004 end-page: 326 ident: bib148 article-title: Ultrastructural characterization of SARS coronavirus publication-title: Emerg. Infect. Dis – volume: 11 start-page: 362 year: 2004 end-page: 371 ident: bib277 article-title: Profiles of antibody responses against severe acute respiratory syndrome coronavirus recombinant proteins and their potential use as diagnostic markers publication-title: Clin. Diagn. Lab. Immunol – volume: 287 start-page: 31 year: 2005 end-page: 55 ident: bib70 article-title: Coronavirus transcription: a perspective publication-title: Curr. Top. Microbiol. Immunol – volume: 361 start-page: 1767 year: 2003 end-page: 1772 ident: bib284 article-title: Clinical progression and viral load in a community outbreak of coronavirus-associated SARS pneumonia: a prospective study publication-title: Lancet – volume: 8 start-page: 237 year: 2011 end-page: 248 ident: bib72 article-title: RNA-RNA and RNA-protein interactions in coronavirus replication and transcription publication-title: RNA Biol – volume: 83 start-page: 3007 year: 2009 end-page: 3018 ident: bib103 article-title: Severe acute respiratory syndrome coronavirus nsp9 dimerization is essential for efficient viral growth publication-title: J. Virol – volume: 117 start-page: 11727 year: 2020 end-page: 11734 ident: bib29 article-title: Cell entry mechanisms of SARS-CoV-2 publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 11 start-page: 607 year: 2012 end-page: 616 ident: bib239 article-title: Antagonism of the interferon-induced OAS-RNase L pathway by murine coronavirus ns2 protein is required for virus replication and liver pathology publication-title: Cell Host Microbe – volume: 11 start-page: e0165077 year: 2016 ident: bib134 article-title: Characterization of the role of hexamer AGUAAA and poly(A) tail in coronavirus polyadenylation publication-title: PLoS ONE – volume: 93 start-page: e01319 year: 2019 end-page: e01348 ident: bib144 article-title: Small-molecule antiviral β- publication-title: J. Virol – volume: 74 start-page: 8127 year: 2000 end-page: 8134 ident: bib160 article-title: Characterization of the coronavirus M protein and nucleocapsid interaction in infected cells publication-title: J. Virol – volume: 580 start-page: 6807 year: 2006 end-page: 6812 ident: bib250 article-title: Augmentation of chemokine production by severe acute respiratory syndrome coronavirus 3a/X1 and 7a/X4 proteins through NF-κB activation publication-title: FEBS Lett – volume: 6 start-page: e1000896 year: 2010 ident: bib114 article-title: Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing publication-title: PLoS Pathog – volume: 181 start-page: 1036 year: 2020 end-page: 1045.e9 ident: bib222 article-title: Imbalanced host response to SARS-CoV-2 drives development of COVID-19 publication-title: Cell – volume: 213 start-page: 877 year: 2016 end-page: 879 ident: bib265 article-title: Discovery of T-cell infection and apoptosis by Middle East respiratory syndrome coronavirus publication-title: J. Infect. Dis – volume: 2 start-page: e459 year: 2007 ident: bib295 article-title: Analysis of intraviral protein-protein interactions of the SARS coronavirus ORFeome publication-title: PLoS ONE – volume: 25 start-page: 4933 year: 2006 end-page: 4942 ident: bib97 article-title: A second, non-canonical RNA-dependent RNA polymerase in SARS coronavirus publication-title: EMBO J – volume: 106 start-page: 2366 year: 2005 end-page: 2374 ident: bib206 article-title: Chemokine up-regulation in SARS-coronavirus-infected, monocyte-derived human dendritic cells publication-title: Blood – volume: 117 start-page: 8094 year: 2020 end-page: 8103 ident: bib241 article-title: Coronavirus endoribonuclease targets viral polyuridine sequences to evade activating host sensors publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 450–451 start-page: 64 year: 2014 end-page: 70 ident: bib64 article-title: MERS-CoV papain-like protease has deISGylating and deubiquitinating activities publication-title: Virology – volume: 368 start-page: 779 year: 2020 end-page: 782 ident: bib93 article-title: Structure of the RNA-dependent RNA polymerase from COVID-19 virus publication-title: Science – volume: 83 start-page: 6631 year: 2009 end-page: 6640 ident: bib321 article-title: Molecular determinants for subcellular localization of the severe acute respiratory syndrome coronavirus open reading frame 3b protein publication-title: J. Virol – volume: 12 start-page: 844 year: 2010 end-page: 861 ident: bib150 article-title: Qualitative and quantitative ultrastructural analysis of the membrane rearrangements induced by coronavirus publication-title: Cell. Microbiol – volume: 18 start-page: 255 year: 2006 end-page: 264 ident: bib293 article-title: Differentiation of memory B and T cells publication-title: Curr. Opin. Immunol – volume: 415 start-page: 69 year: 2011 end-page: 82 ident: bib301 article-title: Subcellular location and topology of severe acute respiratory syndrome coronavirus envelope protein publication-title: Virology – volume: 5 start-page: 279 year: 2013 end-page: 294 ident: bib53 article-title: Altering SARS coronavirus frameshift efficiency affects genomic and subgenomic RNA production publication-title: Viruses – volume: 579 start-page: 6699 year: 2005 end-page: 6704 ident: bib267 article-title: Adenovirus-mediated expression of the C-terminal domain of SARS-CoV spike protein is sufficient to induce apoptosis in Vero E6 cells publication-title: FEBS Lett – volume: 79 start-page: 6620 year: 2005 end-page: 6630 ident: bib85 article-title: Selective replication of coronavirus genomes that express nucleocapsid protein publication-title: J. Virol – volume: 284 start-page: 16202 year: 2009 end-page: 16209 ident: bib233 article-title: Severe acute respiratory syndrome coronavirus M protein inhibits type I interferon production by impeding the formation of TRAF3·TANK·TBK1/IKKε complex publication-title: J. Biol. Chem – volume: 7 start-page: e36521 year: 2012 ident: bib105 article-title: Mechanism of nucleic acid unwinding by SARS-CoV helicase publication-title: PLoS ONE – volume: 303 start-page: 1666 year: 2004 end-page: 1669 ident: bib192 article-title: Molecular evolution of the SARS coronavirus during the course of the SARS epidemic in China publication-title: Science – volume: 81 start-page: 6771 year: 2007 end-page: 6774 ident: bib171 article-title: New structure model for the packaging signal in the genome of group IIa coronaviruses publication-title: J. Virol – volume: 13 start-page: e1006474 year: 2017 ident: bib109 article-title: Crystal structure of Middle East respiratory syndrome coronavirus helicase publication-title: PLoS Pathog – volume: 202 start-page: 120 year: 2015 end-page: 134 ident: bib5 article-title: Host cell proteases: critical determinants of coronavirus tropism and pathogenesis publication-title: Virus Res – volume: 109 start-page: 97 year: 2014 end-page: 109 ident: bib186 article-title: Accessory proteins of SARS-CoV and other coronaviruses publication-title: Antiviral Res – volume: 2 start-page: 265 year: 2015 end-page: 288 ident: bib76 article-title: Continuous and discontinuous RNA synthesis in coronaviruses publication-title: Annu. Rev. Virol – volume: 82 start-page: 7212 year: 2008 end-page: 7222 ident: bib324 article-title: Severe acute respiratory syndrome coronavirus protein 6 accelerates murine hepatitis virus infections by more than one mechanism publication-title: J. Virol – volume: 80 start-page: 785 year: 2006 end-page: 793 ident: bib205 article-title: 7a protein of severe acute respiratory syndrome coronavirus inhibits cellular protein synthesis and activates p38 mitogen-activated protein kinase publication-title: J. Virol – volume: 43 start-page: 8416 year: 2015 end-page: 8434 ident: bib96 article-title: Discovery of an essential nucleotidylating activity associated with a newly delineated conserved domain in the RNA polymerase-containing protein of all nidoviruses publication-title: Nucleic Acids Res – volume: 96 start-page: 21 year: 2012 end-page: 31 ident: bib146 article-title: The viral RNA capping machinery as a target for antiviral drugs publication-title: Antiviral Res – volume: 394 start-page: 544 year: 2009 end-page: 557 ident: bib87 article-title: Coronavirus N protein N-terminal domain (NTD) specifically binds the transcriptional regulatory sequence (TRS) and melts TRS-cTRS RNA duplexes publication-title: J. Mol. Biol – volume: 115 start-page: 21 year: 2015 end-page: 38 ident: bib65 article-title: The SARS-coronavirus papain-like protease: structure, function and inhibition by designed antiviral compounds publication-title: Antiviral Res – volume: 34 start-page: 743 year: 2003 end-page: 748 ident: bib217 article-title: Lung pathology of severe acute respiratory syndrome (SARS): a study of 8 autopsy cases from Singapore publication-title: Hum. Pathol – volume: 92 start-page: 216 year: 2018 end-page: 286 ident: bib318 article-title: Structural and biochemical characterization of endoribonuclease Nsp15 encoded by Middle East respiratory syndrome coronavirus publication-title: J. Virol – volume: 291 start-page: 9218 year: 2016 end-page: 9232 ident: bib27 article-title: Glycopeptide antibiotics potently inhibit cathepsin L in the late endosome/lysosome and block the entry of Ebola virus, Middle East respiratory syndrome coronavirus (MERS-CoV), and severe acute respiratory syndrome coronavirus (SARS-CoV) publication-title: J. Biol. Chem – volume: 78 start-page: 5913 year: 2004 end-page: 5922 ident: bib165 article-title: Intracellular targeting signals contribute to localization of coronavirus spike proteins near the virus assembly site publication-title: J. Virol – volume: 277 start-page: 235 year: 2000 end-page: 249 ident: bib174 article-title: Identification of nucleocapsid binding sites within coronavirus-defective genomes publication-title: Virology – volume: 395 start-page: 1054 year: 2020 end-page: 1062 ident: bib221 article-title: Clinical course and risk factors for mortality of adult inpatients with COVID-19 in Wuhan, China: a retrospective cohort study publication-title: Lancet – volume: 176 start-page: 104742 year: 2020 ident: bib36 article-title: The spike glycoprotein of the new coronavirus 2019-nCoV contains a furin-like cleavage site absent in CoV of the same clade publication-title: Antiviral Res – volume: 79 start-page: 2079 year: 2005 end-page: 2086 ident: bib214 article-title: Inhibition of β interferon induction by severe acute respiratory syndrome coronavirus suggests a two-step model for activation of interferon regulatory factor 3 publication-title: J. Virol – volume: 295 start-page: 6785 year: 2020 end-page: 6797 ident: bib142 article-title: Remdesivir is a direct-acting antiviral that inhibits RNA-dependent RNA polymerase from severe acute respiratory syndrome coronavirus 2 with high potency publication-title: J. Biol. Chem – volume: 922 start-page: 1 year: 2012 end-page: 21 ident: bib104 article-title: Functions of single-strand DNA-binding proteins in DNA replication, recombination, and repair publication-title: Methods Mol. Biol – volume: 24 start-page: 490 year: 2016 end-page: 502 ident: bib122 article-title: Epidemiology, genetic recombination, and pathogenesis of coronaviruses publication-title: Trends Microbiol – volume: 203 start-page: 631 year: 2004 end-page: 637 ident: bib9 article-title: Tissue distribution of ACE2 protein, the functional receptor for SARS coronavirus: a first step in understanding SARS pathogenesis publication-title: J. Pathol – volume: 6 start-page: e19612 year: 2011 end-page: e19655 ident: bib198 article-title: Deep sequencing reveals direct targets of gammaherpesvirus-induced mRNA decay and suggests that multiple mechanisms govern cellular transcript escape publication-title: PLoS ONE – volume: 56 start-page: 919 year: 2005 end-page: 922 ident: bib291 article-title: Experience of using convalescent plasma for severe acute respiratory syndrome among healthcare workers in a Taiwan hospital publication-title: J. Antimicrob. Chemother – volume: 93 start-page: 275 year: 2012 end-page: 281 ident: bib231 article-title: Bat severe acute respiratory syndrome-like coronavirus ORF3b homologues display different interferon antagonist activities publication-title: J. Gen. Virol – volume: 205 start-page: 1601 year: 2008 end-page: 1610 ident: bib227 article-title: Length-dependent recognition of double-stranded ribonucleic acids by retinoic acid–inducible gene-I and melanoma differentiation–associated gene 5 publication-title: J. Exp. Med – volume: 9 start-page: e1003565 year: 2013 ident: bib115 article-title: Coronaviruses lacking exoribonuclease activity are susceptible to lethal mutagenesis: evidence for proofreading and potential therapeutics publication-title: PLoS Pathog – volume: 30 start-page: 343 year: 2020 end-page: 355 ident: bib46 article-title: Inhibition of SARS-CoV-2 (previously 2019-nCoV) infection by a highly potent pan-coronavirus fusion inhibitor targeting its spike protein that harbors a high capacity to mediate membrane fusion publication-title: Cell Res – volume: 7 start-page: e1002059 year: 2011 ident: bib131 article-title: Crystal structure and functional analysis of the SARS-coronavirus RNA cap 2′- publication-title: PLoS Pathog – volume: 11 start-page: e01610 year: 2020 end-page: e01620 ident: bib193 article-title: Discovery and Genomic Characterization of a 382-Nucleotide Deletion in ORF7b and ORF8 during the Early Evolution of SARS-CoV-2 publication-title: bioRxiv – year: 2020 ident: bib190 article-title: SARS-CoV-2 is sensitive to type I interferon pretreatment publication-title: bioRxiv – volume: 4 start-page: a011254 year: 2012 ident: bib243 article-title: MAP kinase pathways publication-title: Cold Spring Harb. Perspect. Biol – volume: 122 start-page: 20 year: 2006 end-page: 27 ident: bib259 article-title: Over-expression of severe acute respiratory syndrome coronavirus 3b protein induces both apoptosis and necrosis in Vero E6 cells publication-title: Virus Res – volume: 106 start-page: 3484 year: 2009 end-page: 3489 ident: bib129 article-title: Functional screen reveals SARS coronavirus nonstructural protein nsp14 as a novel cap N7 methyltransferase publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 16 start-page: 462 year: 2014 end-page: 472 ident: bib86 article-title: Nucleocapsid phosphorylation and RNA helicase DDX1 recruitment enables coronavirus transition from discontinuous to continuous transcription publication-title: Cell Host Microbe – volume: 265 start-page: 57 year: 2019 end-page: 66 ident: bib320 article-title: PEDV nsp16 negatively regulates innate immunity to promote viral proliferation publication-title: Virus Res – volume: 368 start-page: 1274 year: 2020 end-page: 1278 ident: bib45 article-title: A noncompeting pair of human neutralizing antibodies block COVID-19 virus binding to its receptor ACE2 publication-title: Science – volume: 81 start-page: 6346 year: 2007 end-page: 6355 ident: bib273 article-title: Induction of apoptosis by the severe acute respiratory syndrome coronavirus 7a protein is dependent on its interaction with the Bcl-XL protein publication-title: J. Virol – volume: 11 start-page: 972 year: 2019 ident: bib38 article-title: The S2 subunit of QX-type infectious bronchitis coronavirus spike protein is an essential determinant of neurotropism publication-title: Viruses – volume: 300 start-page: 1399 year: 2003 end-page: 1404 ident: bib183 article-title: The genome sequence of the SARS-associated coronavirus publication-title: Science – volume: 86 start-page: 11128 year: 2012 end-page: 11137 ident: bib197 article-title: Severe acute respiratory syndrome coronavirus nsp1 facilitates efficient propagation in cells through a specific translational shutoff of host mRNA publication-title: J. Virol – volume: 235 start-page: 185 year: 2015 end-page: 195 ident: bib212 article-title: Molecular pathology of emerging coronavirus infections publication-title: J. Pathol – volume: 87 start-page: 12611 year: 2013 end-page: 12618 ident: bib313 article-title: Chimeric exchange of coronavirus nsp5 proteases (3CLpro) identifies common and divergent regulatory determinants of protease activity publication-title: J. Virol – volume: 10 start-page: e1004166 year: 2014 ident: bib151 article-title: Targeting membrane-bound viral RNA synthesis reveals potent inhibition of diverse coronaviruses including the middle East respiratory syndrome virus publication-title: PLoS Pathog – volume: 73 start-page: 1907 year: 2005 end-page: 1916 ident: bib257 article-title: Apoptosis, pyroptosis, and necrosis: mechanistic description of dead and dying eukaryotic cells publication-title: Infect. Immun – volume: 35 start-page: e86 year: 2020 ident: bib282 article-title: Viral load kinetics of SARS-CoV-2 infection in first two patients in Korea publication-title: J. Korean Med. Sci – volume: 12 start-page: 137 year: 2011 end-page: 143 ident: bib132 article-title: Ribose 2′- publication-title: Nat. Immunol – volume: 88 start-page: 913 year: 2014 end-page: 924 ident: bib255 article-title: Inhibition of NF-κB-mediated inflammation in severe acute respiratory syndrome coronavirus-infected mice increases survival publication-title: J. Virol – volume: 10 start-page: 2342 year: 2019 ident: bib92 article-title: Structure of the SARS-CoV nsp12 polymerase bound to nsp7 and nsp8 co-factors publication-title: Nat. Commun – volume: 181 start-page: 281 year: 2020 end-page: 292.e6 ident: bib35 article-title: Structure, function, and antigenicity of the SARS-CoV-2 spike glycoprotein publication-title: Cell – volume: 66 start-page: 3522 year: 1992 end-page: 3530 ident: bib170 article-title: Identification and characterization of a coronavirus packaging signal publication-title: J. Virol – volume: 73 start-page: 6862 year: 1999 end-page: 6871 ident: bib153 article-title: The putative helicase of the coronavirus mouse hepatitis virus is processed from the replicase gene polyprotein and localizes in complexes that are active in viral RNA synthesis publication-title: J. Virol – volume: 87 start-page: 12552 year: 2013 end-page: 12561 ident: bib19 article-title: Middle East respiratory syndrome coronavirus infection mediated by the transmembrane serine protease TMPRSS2 publication-title: J. Virol – volume: 68 start-page: 8131 year: 1994 end-page: 8140 ident: bib133 article-title: Identification of the cis-acting signal for minus-strand RNA synthesis of a murine coronavirus: implications for the role of minus-strand RNA in RNA replication and transcription publication-title: J. Virol – volume: 18 start-page: e3000715 year: 2020 ident: bib155 article-title: A unifying structural and functional model of the coronavirus replication organelle: tracking down RNA synthesis publication-title: PLoS Biol – volume: 80 start-page: 2684 year: 2006 end-page: 2693 ident: bib208 article-title: Modeling the early events of severe acute respiratory syndrome coronavirus infection publication-title: J. Virol – volume: 361 start-page: 1773 year: 2003 end-page: 1778 ident: bib218 article-title: Lung pathology of fatal severe acute respiratory syndrome publication-title: Lancet – volume: 387 start-page: 402 year: 2009 end-page: 413 ident: bib325 article-title: The 8ab protein of SARS-CoV is a luminal ER membrane-associated protein and induces the activation of ATF6 publication-title: Virology – volume: 87 start-page: 5502 year: 2013 end-page: 5511 ident: bib18 article-title: The spike protein of the emerging betacoronavirus EMC uses a novel coronavirus receptor for entry, can be activated by TMPRSS2, and is targeted by neutralizing antibodies publication-title: J. Virol – volume: 104 start-page: 12123 year: 2007 end-page: 12128 ident: bib285 article-title: Potent cross-reactive neutralization of SARS coronavirus isolates by human monoclonal antibodies publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 19 start-page: 181 year: 2016 end-page: 193 ident: bib209 article-title: Dysregulated type I interferon and inflammatory monocyte-macrophage responses cause lethal pneumonia in SARS-CoV-infected mice publication-title: Cell Host Microbe – volume: 478 start-page: 75 year: 2015 end-page: 85 ident: bib164 article-title: Coronavirus envelope (E) protein remains at the site of assembly publication-title: Virology – volume: 77 start-page: 2922 year: 2003 end-page: 2927 ident: bib175 article-title: Nucleocapsid-independent specific viral RNA packaging via viral envelope protein and viral RNA signal publication-title: J. Virol – volume: 81 start-page: 12135 year: 2007 end-page: 12144 ident: bib113 article-title: High fidelity of murine hepatitis virus replication is decreased in nsp14 exoribonuclease mutants publication-title: J. Virol – volume: 7 start-page: e1002433 year: 2011 ident: bib81 article-title: SARS coronavirus nsp1 protein induces template-dependent endonucleolytic cleavage of mRNAs: viral mRNAs are resistant to nsp1-induced RNA cleavage publication-title: PLoS Pathog – volume: 3 start-page: e109 year: 2007 ident: bib235 article-title: Coronavirus non-structural protein 1 is a major pathogenicity factor: implications for the rational design of coronavirus vaccines publication-title: PLoS Pathog – volume: 7 start-page: e1002315 year: 2011 ident: bib269 article-title: Severe acute respiratory syndrome coronavirus envelope protein regulates cell stress response and apoptosis publication-title: PLoS Pathog – volume: 9 start-page: e1003760 year: 2013 ident: bib111 article-title: Coronaviruses as DNA wannabes: a new model for the regulation of RNA virus replication fidelity publication-title: PLoS Pathog – volume: 78 start-page: 6723 year: 2004 end-page: 6734 ident: bib272 article-title: A novel severe acute respiratory syndrome coronavirus protein, U274, is transported to the cell surface and undergoes endocytosis publication-title: J. Virol – volume: 89 start-page: 2080 year: 2015 end-page: 2089 ident: bib312 article-title: Mutations across murine hepatitis virus nsp4 alter virus fitness and membrane modifications publication-title: J. Virol – volume: 9 start-page: 1392 year: 2002 end-page: 1395 ident: bib263 article-title: detection of apoptosis in monocytes/macrophages infected with human coronavirus publication-title: Clin. Diagn. Lab. Immunol – volume: 114 start-page: E4251 year: 2017 end-page: E4260 ident: bib317 article-title: Coronavirus nonstructural protein 15 mediates evasion of dsRNA sensors and limits apoptosis in macrophages publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 24 start-page: 44 year: 2005 end-page: 46 ident: bib289 article-title: Use of convalescent plasma therapy in SARS patients in Hong Kong publication-title: Eur. J. Clin. Microbiol. Infect. Dis – volume: 133 start-page: 136 year: 2008 end-page: 148 ident: bib297 article-title: The SARS-coronavirus PLnc domain of nsp3 as a replication/transcription scaffolding protein publication-title: Virus Res – volume: 56 start-page: 912 year: 1985 end-page: 920 ident: bib14 article-title: Proteolytic cleavage of the E2-glycoprotein of murine coronavirus: host-dependent differences in proteolytic cleavage and cell-fusion publication-title: J. Virol – volume: 89 start-page: 6418 year: 2015 end-page: 6426 ident: bib117 article-title: Mutations in coronavirus nonstructural protein 10 decrease virus replication fidelity publication-title: J. Virol – volume: 11 start-page: 1620 year: 2020 ident: bib43 article-title: Characterization of spike glycoprotein of SARS-CoV-2 on virus entry and its immune cross-reactivity with SARS-CoV publication-title: Nat. Commun – volume: 75 start-page: 4439 year: 2001 end-page: 4443 ident: bib42 article-title: Generation of a highly pathogenic avian influenza A virus from an avirulent field isolate by passaging in chickens publication-title: J. Virol – volume: 218 start-page: 52 year: 1996 end-page: 60 ident: bib156 article-title: The production of recombinant infectious DI-particles of a murine coronavirus in the absence of helper virus publication-title: Virology – volume: 10 start-page: 1426 year: 2014 end-page: 1441 ident: bib315 article-title: Coronavirus NSP6 restricts autophagosome expansion publication-title: Autophagy – volume: 71 start-page: 9278 year: 1997 end-page: 9284 ident: bib161 article-title: Protein interactions during coronavirus assembly publication-title: J. Virol – volume: 83 start-page: 12998 year: 2009 end-page: 13008 ident: bib310 article-title: Nuclear magnetic resonance structure of the nucleic acid-binding domain of severe acute respiratory syndrome coronavirus nonstructural protein 3 publication-title: J. Virol – volume: 517 start-page: 38 year: 2018 end-page: 43 ident: bib80 article-title: New insights about the regulation of Nidovirus subgenomic mRNA synthesis publication-title: Virology – volume: 81 start-page: 1701 year: 2007 end-page: 1713 ident: bib302 article-title: A severe acute respiratory syndrome coronavirus that lacks the E gene is attenuated publication-title: J. Virol – volume: 87 start-page: 8124 year: 2013 end-page: 8134 ident: bib270 article-title: Upregulation of CHOP/GADD153 during coronavirus infectious bronchitis virus infection modulates apoptosis by restricting activation of the extracellular signal-regulated kinase pathway publication-title: J. Virol – volume: 113 start-page: 12262 year: 2016 end-page: 12267 ident: bib28 article-title: Proteolytic processing of Middle East respiratory syndrome coronavirus spikes expands virus tropism publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 20 start-page: 411 year: 2020 end-page: 412 ident: bib281 article-title: Viral load of SARS-CoV-2 in clinical samples publication-title: Lancet Infect. Dis – volume: 81 start-page: 11054 year: 2007 end-page: 11068 ident: bib274 article-title: Severe acute respiratory syndrome coronavirus gene 7 products contribute to virus-induced apoptosis publication-title: J. Virol – volume: 9 start-page: 382 year: 2020 end-page: 385 ident: bib287 article-title: Potent binding of 2019 novel coronavirus spike protein by a SARS coronavirus-specific human monoclonal antibody publication-title: Emerg. Microbes Infect – volume: 81 start-page: 853 year: 2000 end-page: 879 ident: bib59 article-title: Virus-encoded proteinases and proteolytic processing in the Nidovirales publication-title: J. Gen. Virol – volume: 22 start-page: 420 year: 2017 ident: bib121 article-title: RNA recombination enhances adaptability and is required for virus spread and virulence publication-title: Cell Host Microbe – volume: 30 start-page: 269 year: 2020 end-page: 271 ident: bib30 article-title: Remdesivir and chloroquine effectively inhibit the recently emerged novel coronavirus (2019-nCoV) publication-title: Cell Res – volume: 84 start-page: 2169 year: 2010 end-page: 2175 ident: bib88 article-title: Coronavirus nucleocapsid protein facilitates template switching and is required for efficient transcription publication-title: J. Virol – volume: 40 start-page: 1737 year: 2012 end-page: 1747 ident: bib98 article-title: The SARS-coronavirus nsp7+nsp8 complex is a unique multimeric RNA polymerase capable of both publication-title: Nucleic Acids Res – volume: 311 start-page: 16 year: 2003 end-page: 27 ident: bib180 article-title: Emergence of a coronavirus infectious bronchitis virus mutant with a truncated 3b gene: functional characterization of the 3b protein in pathogenesis and replication publication-title: Virology – volume: 82 start-page: 3882 year: 2008 end-page: 3893 ident: bib83 article-title: Identification of a coronavirus transcription enhancer publication-title: J. Virol – volume: 86 start-page: 10173 year: 2012 end-page: 10185 ident: bib127 article-title: Signatures of host mRNA 5′ terminus for efficient hantavirus cap snatching publication-title: J. Virol – volume: 174 start-page: 11 year: 2011 end-page: 22 ident: bib304 article-title: A structural analysis of M protein in coronavirus assembly and morphology publication-title: J. Struct. Biol – volume: 8 start-page: 25 year: 2019 ident: bib154 article-title: Determination of host proteins composing the microenvironment of coronavirus replicase complexes by proximity-labeling publication-title: Elife – volume: 93 start-page: e00291 year: 2019 ident: bib99 article-title: Identification and characterization of a human coronavirus 229E nonstructural protein 8-associated RNA 3′-terminal adenylyltransferase activity publication-title: J. Virol – volume: 86 start-page: 1423 year: 2005 end-page: 1434 ident: bib305 article-title: Differential maturation and subcellular localization of severe acute respiratory syndrome coronavirus surface proteins S, M and E publication-title: J. Gen. Virol – volume: 479–480 start-page: 600 year: 2015 end-page: 608 ident: bib194 article-title: Emerging roles for RNA degradation in viral replication and antiviral defense publication-title: Virology – volume: 41 start-page: 557 year: 1982 end-page: 565 ident: bib75 article-title: Further characterization of mRNA's of mouse hepatitis virus: presence of common 5-”end nucleotides publication-title: J. Virol – volume: 15 start-page: 2020 year: 1996 end-page: 2028 ident: bib157 article-title: Nucleocapsid-independent assembly of coronavirus-like particles by co-expression of viral envelope protein genes publication-title: EMBO J – volume: 580 start-page: 3643 year: 2006 end-page: 3648 ident: bib326 article-title: Expression and functional characterization of the putative protein 8b of the severe acute respiratory syndrome-associated coronavirus publication-title: FEBS Lett – volume: 4 start-page: e1000054 year: 2008 ident: bib152 article-title: SARS-coronavirus replication/transcription complexes are membrane-protected and need a host factor for activity publication-title: PLoS Pathog – volume: 1102 start-page: 26 year: 2007 end-page: 38 ident: bib191 article-title: The molecular biology of SARS coronavirus publication-title: Ann. N. Y. Acad. Sci – volume: 494 start-page: 491 year: 2001 end-page: 497 ident: bib71 article-title: Mouse hepatitis virus minus-strand templates are unstable and turnover during viral replication publication-title: Adv. Exp. Med. Biol – volume: 41 start-page: 212 year: 2011 end-page: 222 ident: bib219 article-title: Coagulation and autoimmunity in scleroderma interstitial lung disease publication-title: Semin. Arthritis Rheum – volume: 76 start-page: 3697 year: 2002 end-page: 3708 ident: bib147 article-title: RNA replication of mouse hepatitis virus takes place at double-membrane vesicles publication-title: J. Virol – volume: 170 start-page: 1136 year: 2007 end-page: 1147 ident: bib262 article-title: Pathology and pathogenesis of severe acute respiratory syndrome publication-title: Am. J. Pathol – volume: 579 start-page: 270 year: 2020 end-page: 273 ident: bib7 article-title: A pneumonia outbreak associated with a new coronavirus of probable bat origin publication-title: Nature – volume: 78 start-page: 6048 year: 2004 end-page: 6054 ident: bib15 article-title: Cleavage inhibition of the murine coronavirus spike protein by a furin-like enzyme affects cell-cell but not virus-cell fusion publication-title: J. Virol – volume: 91 start-page: 1 year: 2011 end-page: 10 ident: bib57 article-title: Interference of ribosomal frameshifting by antisense peptide nucleic acids suppresses SARS coronavirus replication publication-title: Antiviral Res – volume: 464 start-page: 439 year: 2014 end-page: 447 ident: bib268 article-title: The SARS-coronavirus membrane protein induces apoptosis via interfering with PDK1-PKB/Akt signalling publication-title: Biochem. J – volume: 85 start-page: 873 year: 2011 end-page: 882 ident: bib12 article-title: A transmembrane serine protease is linked to the severe acute respiratory syndrome coronavirus receptor and activates virus entry publication-title: J. Virol – volume: 12 start-page: 341 year: 2004 end-page: 353 ident: bib102 article-title: The nsp9 replicase protein of SARS-coronavirus, structure and functional insights publication-title: Structure – volume: 78 start-page: 7833 year: 2004 end-page: 7838 ident: bib128 article-title: Human coronavirus 229E nonstructural protein 13: characterization of duplex-unwinding, nucleoside triphosphatase, and RNA 5′-triphosphatase activities publication-title: J. Virol – volume: 101 start-page: 122 year: 2014 end-page: 130 ident: bib138 article-title: SARS-CoV ORF1b-encoded nonstructural proteins 12-16: replicative enzymes as antiviral targets publication-title: Antiviral Res – volume: 35 start-page: 57 year: 2019 end-page: 62 ident: bib139 article-title: Nucleoside analogues for the treatment of coronavirus infections publication-title: Curr. Opin. Virol – volume: 133 start-page: 10094 year: 2011 end-page: 10100 ident: bib56 article-title: Identification of RNA pseudoknot-binding ligand that inhibits the −1 ribosomal frameshifting of SARS-coronavirus by structure-based virtual screening publication-title: J. Am. Chem. Soc – volume: 114 start-page: E8895 year: 2017 end-page: E8904 ident: bib82 article-title: Expanded subgenomic mRNA transcriptome and coding capacity of a nidovirus publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 537 start-page: 198 year: 2019 end-page: 207 ident: bib172 article-title: Coronavirus genomic RNA packaging publication-title: Virology – volume: 88 start-page: 7070 year: 2014 end-page: 7082 ident: bib2 article-title: Identification of diverse alphacoronaviruses and genomic characterization of a novel severe acute respiratory syndrome-like coronavirus from bats in China publication-title: J. Virol – volume: 94 start-page: e01719 year: 2020 end-page: e01774 ident: bib40 article-title: Trypsin treatment unlocks barrier for zoonotic bat coronavirus infection publication-title: J. Virol – volume: 383 start-page: 13 year: 2004 end-page: 18 ident: bib254 article-title: The SARS coronavirus nucleocapsid protein induces actin reorganization and apoptosis in COS-1 cells in the absence of growth factors publication-title: Biochem. J – volume: 181 start-page: 271 year: 2020 end-page: 280.e8 ident: bib6 article-title: SARS-CoV-2 cell entry depends on ACE2 and TMPRSS2 and is blocked by a clinically proven protease inhibitor publication-title: Cell – volume: 84 start-page: 280 year: 2010 end-page: 290 ident: bib311 article-title: Murine hepatitis virus nonstructural protein 4 regulates virus-induced membrane modifications and replication complex function publication-title: J. Virol – volume: 93 start-page: e00319 year: 2019 end-page: e00373 ident: bib199 article-title: C19ORF66 broadly escapes virus-induced endonuclease cleavage and restricts Kaposi's sarcoma-associated herpesvirus publication-title: J. Virol – volume: 81 start-page: 10758 year: 2007 end-page: 10768 ident: bib23 article-title: Role of endocytosis and low pH in murine hepatitis virus strain A59 cell entry publication-title: J. Virol – volume: 84 start-page: 4330 year: 2010 end-page: 4340 ident: bib54 article-title: Achieving a golden mean: mechanisms by which coronaviruses ensure synthesis of the correct stoichiometric ratios of viral proteins publication-title: J. Virol – volume: 10 start-page: e1004320 year: 2014 ident: bib253 article-title: The PDZ-binding motif of severe acute respiratory syndrome coronavirus envelope protein is a determinant of viral pathogenesis publication-title: PLoS Pathog – volume: 13 start-page: 461 year: 2015 end-page: 469 ident: bib261 article-title: Viral apoptotic mimicry publication-title: Nat. Rev. Microbiol – volume: 81 start-page: 2418 year: 2007 end-page: 2428 ident: bib167 article-title: The cytoplasmic tail of the severe acute respiratory syndrome coronavirus spike protein contains a novel endoplasmic reticulum retrieval signal that binds COPI and promotes interaction with membrane protein publication-title: J. Virol – volume: 23 start-page: 986 year: 2013 end-page: 993 ident: bib17 article-title: Structure of MERS-CoV spike receptor-binding domain complexed with human receptor DPP4 publication-title: Cell Res – volume: 81 start-page: 11620 year: 2007 end-page: 11633 ident: bib201 article-title: Severe acute respiratory syndrome coronavirus evades antiviral signaling: role of nsp1 and rational design of an attenuated strain publication-title: J. Virol – volume: 13 start-page: 751 year: 2006 end-page: 752 ident: bib300 article-title: Architecture of the SARS coronavirus prefusion spike publication-title: Nat. Struct. Mol. Biol – volume: 109 start-page: 9372 year: 2012 end-page: 9377 ident: bib116 article-title: RNA 3′-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10/nsp14 exoribonuclease complex publication-title: Proc. Natl. Acad. Sci. U.S.A – volume: 149 start-page: 58 year: 2018 end-page: 74 ident: bib309 article-title: Nsp3 of coronaviruses: structures and functions of a large multi-domain protein publication-title: Antiviral Res – volume: 50 start-page: 5419 year: 2011 end-page: 5425 ident: bib249 article-title: SARS-CoV accessory protein 3b induces AP-1 transcriptional activity through activation of JNK and ERK pathways publication-title: Biochemistry – volume: 4 start-page: e00513 year: 2013 end-page: e00524 ident: bib67 article-title: Severe acute respiratory syndrome coronavirus nonstructural proteins 3, 4, and 6 induce double-membrane vesicles publication-title: mBio – volume: 80 start-page: 5927 year: 2006 end-page: 5940 ident: bib149 article-title: Ultrastructure and origin of membrane vesicles associated with the severe acute respiratory syndrome coronavirus replication complex publication-title: J. Virol – volume: 295 start-page: 4773 year: 2020 ident: 10.1074/jbc.REV120.013930_bib141 article-title: The antiviral compound remdesivir potently inhibits RNA-dependent RNA polymerase from Middle East respiratory syndrome coronavirus publication-title: J. Biol. Chem doi: 10.1074/jbc.AC120.013056 – volume: 6 start-page: e1000863 year: 2010 ident: 10.1074/jbc.REV120.013930_bib130 article-title: In vitro reconstitution of SARS-coronavirus mRNA cap methylation publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1000863 – volume: 35 start-page: e86 year: 2020 ident: 10.1074/jbc.REV120.013930_bib282 article-title: Viral load kinetics of SARS-CoV-2 infection in first two patients in Korea publication-title: J. Korean Med. Sci doi: 10.3346/jkms.2020.35.e86 – volume: 91 start-page: 14 year: 2017 ident: 10.1074/jbc.REV120.013930_bib314 article-title: Porcine deltacoronavirus nsp5 antagonizes type I interferon signaling by cleaving STAT2 publication-title: J. Virol doi: 10.1128/JVI.00003-17 – volume: 117 start-page: 11727 year: 2020 ident: 10.1074/jbc.REV120.013930_bib29 article-title: Cell entry mechanisms of SARS-CoV-2 publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.2003138117 – volume: 10 start-page: 290 year: 2004 ident: 10.1074/jbc.REV120.013930_bib224 article-title: Pegylated interferon-α protects type 1 pneumocytes against SARS coronavirus infection in macaques publication-title: Nat. Med doi: 10.1038/nm1001 – volume: 16 start-page: 462 year: 2014 ident: 10.1074/jbc.REV120.013930_bib86 article-title: Nucleocapsid phosphorylation and RNA helicase DDX1 recruitment enables coronavirus transition from discontinuous to continuous transcription publication-title: Cell Host Microbe doi: 10.1016/j.chom.2014.09.009 – volume: 84 start-page: 12658 year: 2010 ident: 10.1074/jbc.REV120.013930_bib11 article-title: Efficient activation of the severe acute respiratory syndrome coronavirus spike protein by the transmembrane protease TMPRSS2 publication-title: J. Virol doi: 10.1128/JVI.01542-10 – volume: 57 start-page: 328 year: 1986 ident: 10.1074/jbc.REV120.013930_bib89 article-title: Coronavirus minus-strand RNA synthesis and effect of cycloheximide on coronavirus RNA synthesis publication-title: J. Virol doi: 10.1128/jvi.57.1.328-334.1986 – volume: 81 start-page: 11054 year: 2007 ident: 10.1074/jbc.REV120.013930_bib274 article-title: Severe acute respiratory syndrome coronavirus gene 7 products contribute to virus-induced apoptosis publication-title: J. Virol doi: 10.1128/JVI.01266-07 – volume: 114 start-page: E8895 year: 2017 ident: 10.1074/jbc.REV120.013930_bib82 article-title: Expanded subgenomic mRNA transcriptome and coding capacity of a nidovirus publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.1706696114 – volume: 78 start-page: 5913 year: 2004 ident: 10.1074/jbc.REV120.013930_bib165 article-title: Intracellular targeting signals contribute to localization of coronavirus spike proteins near the virus assembly site publication-title: J. Virol doi: 10.1128/JVI.78.11.5913-5922.2004 – year: 2020 ident: 10.1074/jbc.REV120.013930_bib190 article-title: SARS-CoV-2 is sensitive to type I interferon pretreatment publication-title: bioRxiv – volume: 4 start-page: 280 year: 2014 ident: 10.1074/jbc.REV120.013930_bib247 article-title: Pleiotropic effects of interleukin-6 in a “two-hit” murine model of acute respiratory distress syndrome publication-title: Pulm. Circ doi: 10.1086/675991 – volume: 94 year: 2020 ident: 10.1074/jbc.REV120.013930_bib32 article-title: Receptor recognition by the novel coronavirus from Wuhan: an analysis based on decade-long structural studies of SARS coronavirus publication-title: J. Virol doi: 10.1128/JVI.00127-20 – volume: 81 start-page: 1701 year: 2007 ident: 10.1074/jbc.REV120.013930_bib302 article-title: A severe acute respiratory syndrome coronavirus that lacks the E gene is attenuated in vitro in vivo publication-title: J. Virol doi: 10.1128/JVI.01467-06 – volume: 87 start-page: 1953 year: 2006 ident: 10.1074/jbc.REV120.013930_bib207 article-title: Interaction of severe acute respiratory syndrome-associated coronavirus with dendritic cells publication-title: J. Gen. Virol doi: 10.1099/vir.0.81624-0 – volume: 150 start-page: 123 year: 2018 ident: 10.1074/jbc.REV120.013930_bib135 article-title: Broad-spectrum antiviral activity of the eIF4A inhibitor silvestrol against corona- and picornaviruses publication-title: Antiviral Res doi: 10.1016/j.antiviral.2017.12.010 – volume: 20 start-page: 411 year: 2020 ident: 10.1074/jbc.REV120.013930_bib281 article-title: Viral load of SARS-CoV-2 in clinical samples publication-title: Lancet Infect. Dis doi: 10.1016/S1473-3099(20)30113-4 – volume: 458-459 start-page: 125 year: 2014 ident: 10.1074/jbc.REV120.013930_bib69 article-title: Membrane rearrangements mediated by coronavirus nonstructural proteins 3 and 4 publication-title: Virology doi: 10.1016/j.virol.2014.04.027 – volume: 83 start-page: 3007 year: 2009 ident: 10.1074/jbc.REV120.013930_bib103 article-title: Severe acute respiratory syndrome coronavirus nsp9 dimerization is essential for efficient viral growth publication-title: J. Virol doi: 10.1128/JVI.01505-08 – volume: 81 start-page: 6771 year: 2007 ident: 10.1074/jbc.REV120.013930_bib171 article-title: New structure model for the packaging signal in the genome of group IIa coronaviruses publication-title: J. Virol doi: 10.1128/JVI.02231-06 – volume: 79 start-page: 2079 year: 2005 ident: 10.1074/jbc.REV120.013930_bib214 article-title: Inhibition of β interferon induction by severe acute respiratory syndrome coronavirus suggests a two-step model for activation of interferon regulatory factor 3 publication-title: J. Virol doi: 10.1128/JVI.79.4.2079-2086.2005 – volume: 27 start-page: 992 year: 2020 ident: 10.1074/jbc.REV120.013930_bib246 article-title: Complex immune dysregulation in COVID-19 patients with severe respiratory failure publication-title: Cell Host Microbe doi: 10.1016/j.chom.2020.04.009 – volume: 28 start-page: 19 year: 2009 ident: 10.1074/jbc.REV120.013930_bib41 article-title: History of highly pathogenic avian influenza publication-title: Rev. Sci. Tech doi: 10.20506/rst.28.1.1856 – volume: 157 start-page: 2095 year: 2012 ident: 10.1074/jbc.REV120.013930_bib95 article-title: Biochemical characterization of a recombinant SARS coronavirus nsp12 RNA-dependent RNA polymerase capable of copying viral RNA templates publication-title: Arch. Virol doi: 10.1007/s00705-012-1404-x – volume: 88 start-page: 913 year: 2014 ident: 10.1074/jbc.REV120.013930_bib255 article-title: Inhibition of NF-κB-mediated inflammation in severe acute respiratory syndrome coronavirus-infected mice increases survival publication-title: J. Virol doi: 10.1128/JVI.02576-13 – volume: 87 start-page: 8124 year: 2013 ident: 10.1074/jbc.REV120.013930_bib270 article-title: Upregulation of CHOP/GADD153 during coronavirus infectious bronchitis virus infection modulates apoptosis by restricting activation of the extracellular signal-regulated kinase pathway publication-title: J. Virol doi: 10.1128/JVI.00626-13 – volume: 464 start-page: 439 year: 2014 ident: 10.1074/jbc.REV120.013930_bib268 article-title: The SARS-coronavirus membrane protein induces apoptosis via interfering with PDK1-PKB/Akt signalling publication-title: Biochem. J doi: 10.1042/BJ20131461 – volume: 30 start-page: 269 year: 2020 ident: 10.1074/jbc.REV120.013930_bib30 article-title: Remdesivir and chloroquine effectively inhibit the recently emerged novel coronavirus (2019-nCoV) in vitro publication-title: Cell Res doi: 10.1038/s41422-020-0282-0 – volume: 79 start-page: 6620 year: 2005 ident: 10.1074/jbc.REV120.013930_bib85 article-title: Selective replication of coronavirus genomes that express nucleocapsid protein publication-title: J. Virol doi: 10.1128/JVI.79.11.6620-6630.2005 – volume: 277 start-page: 235 year: 2000 ident: 10.1074/jbc.REV120.013930_bib174 article-title: Identification of nucleocapsid binding sites within coronavirus-defective genomes publication-title: Virology doi: 10.1006/viro.2000.0611 – volume: 24 start-page: 490 year: 2016 ident: 10.1074/jbc.REV120.013930_bib122 article-title: Epidemiology, genetic recombination, and pathogenesis of coronaviruses publication-title: Trends Microbiol doi: 10.1016/j.tim.2016.03.003 – volume: 287 start-page: 31 year: 2005 ident: 10.1074/jbc.REV120.013930_bib70 article-title: Coronavirus transcription: a perspective publication-title: Curr. Top. Microbiol. Immunol – volume: 81 start-page: 20 year: 2007 ident: 10.1074/jbc.REV120.013930_bib79 article-title: A contemporary view of coronavirus transcription publication-title: J. Virol doi: 10.1128/JVI.01358-06 – volume: 282 start-page: 32208 year: 2007 ident: 10.1074/jbc.REV120.013930_bib230 article-title: Regulation of IRF-3-dependent innate immunity by the papain-like protease domain of the severe acute respiratory syndrome coronavirus publication-title: J. Biol. Chem doi: 10.1074/jbc.M704870200 – volume: 4 start-page: e00513 year: 2013 ident: 10.1074/jbc.REV120.013930_bib67 article-title: Severe acute respiratory syndrome coronavirus nonstructural proteins 3, 4, and 6 induce double-membrane vesicles publication-title: mBio doi: 10.1128/mBio.00524-13 – volume: 81 start-page: 813 year: 2007 ident: 10.1074/jbc.REV120.013930_bib213 article-title: Lethal infection of K18-hACE2 mice infected with severe acute respiratory syndrome coronavirus publication-title: J. Virol doi: 10.1128/JVI.02012-06 – volume: 186 start-page: 7264 year: 2011 ident: 10.1074/jbc.REV120.013930_bib292 article-title: Lack of peripheral memory B cell responses in recovered patients with severe acute respiratory syndrome: a six-year follow-up study publication-title: J. Immunol doi: 10.4049/jimmunol.0903490 – volume: 81 start-page: 10758 year: 2007 ident: 10.1074/jbc.REV120.013930_bib23 article-title: Role of endocytosis and low pH in murine hepatitis virus strain A59 cell entry publication-title: J. Virol doi: 10.1128/JVI.00725-07 – volume: 109 start-page: 97 year: 2014 ident: 10.1074/jbc.REV120.013930_bib186 article-title: Accessory proteins of SARS-CoV and other coronaviruses publication-title: Antiviral Res doi: 10.1016/j.antiviral.2014.06.013 – volume: 117 start-page: 17 year: 2006 ident: 10.1074/jbc.REV120.013930_bib49 article-title: Nidovirales: evolving the largest RNA virus genome publication-title: Virus Res doi: 10.1016/j.virusres.2006.01.017 – volume: 2 start-page: 265 year: 2015 ident: 10.1074/jbc.REV120.013930_bib76 article-title: Continuous and discontinuous RNA synthesis in coronaviruses publication-title: Annu. Rev. Virol doi: 10.1146/annurev-virology-100114-055218 – volume: 10 start-page: e1004166 year: 2014 ident: 10.1074/jbc.REV120.013930_bib151 article-title: Targeting membrane-bound viral RNA synthesis reveals potent inhibition of diverse coronaviruses including the middle East respiratory syndrome virus publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1004166 – volume: 79 start-page: 2506 year: 2005 ident: 10.1074/jbc.REV120.013930_bib77 article-title: Role of nucleotides immediately flanking the transcription-regulating sequence core in coronavirus subgenomic mRNA synthesis publication-title: J. Virol doi: 10.1128/JVI.79.4.2506-2516.2005 – volume: 395 start-page: 497 year: 2020 ident: 10.1074/jbc.REV120.013930_bib220 article-title: Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China publication-title: Lancet doi: 10.1016/S0140-6736(20)30183-5 – volume: 21 start-page: 2076 year: 2002 ident: 10.1074/jbc.REV120.013930_bib21 article-title: Crystal structure of murine sCEACAM1a[1,4]: a coronavirus receptor in the CEA family publication-title: EMBO J doi: 10.1093/emboj/21.9.2076 – volume: 583 start-page: 459 year: 2020 ident: 10.1074/jbc.REV120.013930_bib137 article-title: A SARS-CoV-2 protein interaction map reveals targets for drug repurposing publication-title: Nature doi: 10.1038/s41586-020-2286-9 – volume: 6 start-page: e226 year: 2008 ident: 10.1074/jbc.REV120.013930_bib66 article-title: SARS-coronavirus replication is supported by a reticulovesicular network of modified endoplasmic reticulum publication-title: PLoS Biol doi: 10.1371/journal.pbio.0060226 – volume: 83 start-page: 3743 year: 2009 ident: 10.1074/jbc.REV120.013930_bib238 article-title: Organ-specific attenuation of murine hepatitis virus strain A59 by replacement of catalytic residues in the putative viral cyclic phosphodiesterase ns2 publication-title: J. Virol doi: 10.1128/JVI.02203-08 – volume: 101 start-page: 3792 year: 2004 ident: 10.1074/jbc.REV120.013930_bib101 article-title: The severe acute respiratory syndrome-coronavirus replicative protein nsp9 is a single-stranded RNA-binding subunit unique in the RNA virus world publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.0307877101 – volume: 13 start-page: e1006474 year: 2017 ident: 10.1074/jbc.REV120.013930_bib109 article-title: Crystal structure of Middle East respiratory syndrome coronavirus helicase publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1006474 – volume: 35 start-page: 57 year: 2019 ident: 10.1074/jbc.REV120.013930_bib139 article-title: Nucleoside analogues for the treatment of coronavirus infections publication-title: Curr. Opin. Virol doi: 10.1016/j.coviro.2019.04.002 – volume: 18 start-page: e3000715 year: 2020 ident: 10.1074/jbc.REV120.013930_bib155 article-title: A unifying structural and functional model of the coronavirus replication organelle: tracking down RNA synthesis publication-title: PLoS Biol doi: 10.1371/journal.pbio.3000715 – volume: 4 start-page: a011254 year: 2012 ident: 10.1074/jbc.REV120.013930_bib243 article-title: MAP kinase pathways publication-title: Cold Spring Harb. Perspect. Biol doi: 10.1101/cshperspect.a011254 – volume: 133 start-page: 136 year: 2008 ident: 10.1074/jbc.REV120.013930_bib297 article-title: The SARS-coronavirus PLnc domain of nsp3 as a replication/transcription scaffolding protein publication-title: Virus Res doi: 10.1016/j.virusres.2007.11.017 – volume: 39 start-page: 1071 year: 2004 ident: 10.1074/jbc.REV120.013930_bib245 article-title: Temporal relationship of viral load, ribavirin, interleukin (IL)-6, IL-8, and clinical progression in patients with severe acute respiratory syndrome publication-title: Clin. Infect. Dis doi: 10.1086/423808 – volume: 26 start-page: 453 year: 2020 ident: 10.1074/jbc.REV120.013930_bib278 article-title: Breadth of concomitant immune responses prior to patient recovery: a case report of non-severe COVID-19 publication-title: Nat. Med doi: 10.1038/s41591-020-0819-2 – volume: 86 start-page: 1423 year: 2005 ident: 10.1074/jbc.REV120.013930_bib305 article-title: Differential maturation and subcellular localization of severe acute respiratory syndrome coronavirus surface proteins S, M and E publication-title: J. Gen. Virol doi: 10.1099/vir.0.80671-0 – volume: 368 start-page: 409 year: 2020 ident: 10.1074/jbc.REV120.013930_bib60 article-title: Crystal structure of SARS-CoV-2 main protease provides a basis for design of improved α-ketoamide inhibitors publication-title: Science doi: 10.1126/science.abb3405 – volume: 7 start-page: e36521 year: 2012 ident: 10.1074/jbc.REV120.013930_bib105 article-title: Mechanism of nucleic acid unwinding by SARS-CoV helicase publication-title: PLoS ONE doi: 10.1371/journal.pone.0036521 – volume: 368 start-page: 1274 year: 2020 ident: 10.1074/jbc.REV120.013930_bib45 article-title: A noncompeting pair of human neutralizing antibodies block COVID-19 virus binding to its receptor ACE2 publication-title: Science doi: 10.1126/science.abc2241 – volume: 18 start-page: 290 year: 2008 ident: 10.1074/jbc.REV120.013930_bib25 article-title: SARS coronavirus entry into host cells through a novel clathrin- and caveolae-independent endocytic pathway publication-title: Cell Res doi: 10.1038/cr.2008.15 – volume: 300 start-page: 1394 year: 2003 ident: 10.1074/jbc.REV120.013930_bib184 article-title: Characterization of a novel coronavirus associated with severe acute respiratory syndrome publication-title: Science doi: 10.1126/science.1085952 – volume: 56 start-page: 912 year: 1985 ident: 10.1074/jbc.REV120.013930_bib14 article-title: Proteolytic cleavage of the E2-glycoprotein of murine coronavirus: host-dependent differences in proteolytic cleavage and cell-fusion publication-title: J. Virol doi: 10.1128/jvi.56.3.912-920.1985 – volume: 15 start-page: 2020 year: 1996 ident: 10.1074/jbc.REV120.013930_bib157 article-title: Nucleocapsid-independent assembly of coronavirus-like particles by co-expression of viral envelope protein genes publication-title: EMBO J doi: 10.1002/j.1460-2075.1996.tb00553.x – volume: 7 start-page: 1040 year: 2013 ident: 10.1074/jbc.REV120.013930_bib211 article-title: Epidemiological and clinical features of human coronavirus infections among different subsets of patients publication-title: Influenza Other Respir. Viruses doi: 10.1111/irv.12101 – volume: 7 start-page: e1002294 year: 2011 ident: 10.1074/jbc.REV120.013930_bib319 article-title: Biochemical and structural insights into the mechanisms of SARS coronavirus RNA ribose 2′-O-methylation by nsp16/nsp10 protein complex publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1002294 – volume: 190 start-page: 1119 year: 2004 ident: 10.1074/jbc.REV120.013930_bib279 article-title: Neutralizing antibodies in patients with severe acute respiratory syndrome-associated coronavirus infection publication-title: J. Infect. Dis doi: 10.1086/423286 – volume: 12 start-page: 137 year: 2011 ident: 10.1074/jbc.REV120.013930_bib132 article-title: Ribose 2′-O-methylation provides a molecular signature for the distinction of self and non-self mRNA dependent on the RNA sensor Mda5 publication-title: Nat. Immunol doi: 10.1038/ni.1979 – volume: 93 start-page: e01319 year: 2019 ident: 10.1074/jbc.REV120.013930_bib144 article-title: Small-molecule antiviral β-d-N4-hydroxycytidine inhibits a proofreading-intact coronavirus with a high genetic barrier to resistance publication-title: J. Virol doi: 10.1128/JVI.01348-19 – volume: 83 start-page: 6631 year: 2009 ident: 10.1074/jbc.REV120.013930_bib321 article-title: Molecular determinants for subcellular localization of the severe acute respiratory syndrome coronavirus open reading frame 3b protein publication-title: J. Virol doi: 10.1128/JVI.00367-09 – volume: 117 start-page: 8094 year: 2020 ident: 10.1074/jbc.REV120.013930_bib241 article-title: Coronavirus endoribonuclease targets viral polyuridine sequences to evade activating host sensors publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.1921485117 – volume: 9 start-page: 382 year: 2020 ident: 10.1074/jbc.REV120.013930_bib287 article-title: Potent binding of 2019 novel coronavirus spike protein by a SARS coronavirus-specific human monoclonal antibody publication-title: Emerg. Microbes Infect doi: 10.1080/22221751.2020.1729069 – volume: 579 start-page: 270 year: 2020 ident: 10.1074/jbc.REV120.013930_bib7 article-title: A pneumonia outbreak associated with a new coronavirus of probable bat origin publication-title: Nature doi: 10.1038/s41586-020-2012-7 – volume: 11 start-page: 972 year: 2019 ident: 10.1074/jbc.REV120.013930_bib38 article-title: The S2 subunit of QX-type infectious bronchitis coronavirus spike protein is an essential determinant of neurotropism publication-title: Viruses doi: 10.3390/v11100972 – volume: 84 start-page: 4330 year: 2010 ident: 10.1074/jbc.REV120.013930_bib54 article-title: Achieving a golden mean: mechanisms by which coronaviruses ensure synthesis of the correct stoichiometric ratios of viral proteins publication-title: J. Virol doi: 10.1128/JVI.02480-09 – volume: 133 start-page: 10094 year: 2011 ident: 10.1074/jbc.REV120.013930_bib56 article-title: Identification of RNA pseudoknot-binding ligand that inhibits the −1 ribosomal frameshifting of SARS-coronavirus by structure-based virtual screening publication-title: J. Am. Chem. Soc doi: 10.1021/ja1098325 – volume: 94 start-page: e01719 year: 2020 ident: 10.1074/jbc.REV120.013930_bib40 article-title: Trypsin treatment unlocks barrier for zoonotic bat coronavirus infection publication-title: J. Virol doi: 10.1128/JVI.01774-19 – volume: 27 start-page: 776 year: 2019 ident: 10.1074/jbc.REV120.013930_bib200 article-title: The influenza A virus endoribonuclease PA-X usurps host mRNA processing machinery to limit host gene expression publication-title: Cell Rep doi: 10.1016/j.celrep.2019.03.063 – volume: 265 start-page: 57 year: 2019 ident: 10.1074/jbc.REV120.013930_bib320 article-title: PEDV nsp16 negatively regulates innate immunity to promote viral proliferation publication-title: Virus Res doi: 10.1016/j.virusres.2019.03.005 – volume: 181 start-page: 281 year: 2020 ident: 10.1074/jbc.REV120.013930_bib35 article-title: Structure, function, and antigenicity of the SARS-CoV-2 spike glycoprotein publication-title: Cell doi: 10.1016/j.cell.2020.02.058 – volume: 517 start-page: 38 year: 2018 ident: 10.1074/jbc.REV120.013930_bib80 article-title: New insights about the regulation of Nidovirus subgenomic mRNA synthesis publication-title: Virology doi: 10.1016/j.virol.2018.01.026 – volume: 295 start-page: 6785 year: 2020 ident: 10.1074/jbc.REV120.013930_bib142 article-title: Remdesivir is a direct-acting antiviral that inhibits RNA-dependent RNA polymerase from severe acute respiratory syndrome coronavirus 2 with high potency publication-title: J. Biol. Chem doi: 10.1074/jbc.RA120.013679 – volume: 79 start-page: 14909 year: 2005 ident: 10.1074/jbc.REV120.013930_bib178 article-title: Severe acute respiratory syndrome coronavirus group-specific open reading frames encode nonessential functions for replication in cell cultures and mice publication-title: J. Virol doi: 10.1128/JVI.79.23.14909-14922.2005 – volume: 80 start-page: 296 year: 2006 ident: 10.1074/jbc.REV120.013930_bib181 article-title: Neither the RNA nor the proteins of open reading frames 3a and 3b of the coronavirus infectious bronchitis virus are essential for replication publication-title: J. Virol doi: 10.1128/JVI.80.1.296-305.2006 – volume: 50 start-page: 5419 year: 2011 ident: 10.1074/jbc.REV120.013930_bib249 article-title: SARS-CoV accessory protein 3b induces AP-1 transcriptional activity through activation of JNK and ERK pathways publication-title: Biochemistry doi: 10.1021/bi200303r – volume: 6 start-page: e19612 year: 2011 ident: 10.1074/jbc.REV120.013930_bib198 article-title: Deep sequencing reveals direct targets of gammaherpesvirus-induced mRNA decay and suggests that multiple mechanisms govern cellular transcript escape publication-title: PLoS ONE doi: 10.1371/journal.pone.0019655 – volume: 21 start-page: 1586 year: 2007 ident: 10.1074/jbc.REV120.013930_bib248 article-title: Spike protein of SARS-CoV stimulates cyclooxygenase-2 expression via both calcium-dependent and calcium-independent protein kinase C pathways publication-title: FASEB J doi: 10.1096/fj.06-6589com – volume: 1102 start-page: 26 year: 2007 ident: 10.1074/jbc.REV120.013930_bib191 article-title: The molecular biology of SARS coronavirus publication-title: Ann. N. Y. Acad. Sci doi: 10.1196/annals.1408.002 – volume: 89 start-page: 1960 year: 2008 ident: 10.1074/jbc.REV120.013930_bib271 article-title: Severe acute respiratory syndrome coronavirus 3a protein activates the mitochondrial death pathway through p38 MAP kinase activation publication-title: J. Gen. Virol doi: 10.1099/vir.0.83665-0 – volume: 111 start-page: 15214 year: 2014 ident: 10.1074/jbc.REV120.013930_bib13 article-title: Host cell entry of Middle East respiratory syndrome coronavirus after two-step, furin-mediated activation of the spike protein publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.1407087111 – volume: 87 start-page: 12552 year: 2013 ident: 10.1074/jbc.REV120.013930_bib19 article-title: Middle East respiratory syndrome coronavirus infection mediated by the transmembrane serine protease TMPRSS2 publication-title: J. Virol doi: 10.1128/JVI.01890-13 – volume: 10 start-page: 1426 year: 2014 ident: 10.1074/jbc.REV120.013930_bib315 article-title: Coronavirus NSP6 restricts autophagosome expansion publication-title: Autophagy doi: 10.4161/auto.29309 – volume: 9 start-page: e00218 year: 2018 ident: 10.1074/jbc.REV120.013930_bib140 article-title: Coronavirus susceptibility to the antiviral remdesivir (GS-5734) is mediated by the viral polymerase and the proofreading exoribonuclease publication-title: mBio doi: 10.1128/mBio.00221-18 – volume: 109 start-page: 9372 year: 2012 ident: 10.1074/jbc.REV120.013930_bib116 article-title: RNA 3′-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10/nsp14 exoribonuclease complex publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.1201130109 – volume: 141 start-page: 101 year: 2017 ident: 10.1074/jbc.REV120.013930_bib61 article-title: Identification and evaluation of potent Middle East respiratory syndrome coronavirus (MERS-CoV) 3CLPro inhibitors publication-title: Antiviral Res doi: 10.1016/j.antiviral.2017.02.007 – volume: 11 start-page: 607 year: 2012 ident: 10.1074/jbc.REV120.013930_bib239 article-title: Antagonism of the interferon-induced OAS-RNase L pathway by murine coronavirus ns2 protein is required for virus replication and liver pathology publication-title: Cell Host Microbe doi: 10.1016/j.chom.2012.04.011 – volume: 88 start-page: 7070 year: 2014 ident: 10.1074/jbc.REV120.013930_bib2 article-title: Identification of diverse alphacoronaviruses and genomic characterization of a novel severe acute respiratory syndrome-like coronavirus from bats in China publication-title: J. Virol doi: 10.1128/JVI.00631-14 – volume: 153 start-page: 299 year: 2010 ident: 10.1074/jbc.REV120.013930_bib322 article-title: SARS-coronavirus protein 6 conformations required to impede protein import into the nucleus publication-title: Virus Res doi: 10.1016/j.virusres.2010.08.017 – volume: 203 start-page: 631 year: 2004 ident: 10.1074/jbc.REV120.013930_bib9 article-title: Tissue distribution of ACE2 protein, the functional receptor for SARS coronavirus: a first step in understanding SARS pathogenesis publication-title: J. Pathol doi: 10.1002/path.1570 – volume: 143 start-page: 1667 year: 2018 ident: 10.1074/jbc.REV120.013930_bib143 article-title: Functionalized 2,1-benzothiazine 2,2-dioxides as new inhibitors of Dengue NS5 RNA-dependent RNA polymerase publication-title: Eur. J. Med. Chem doi: 10.1016/j.ejmech.2017.10.064 – volume: 368 start-page: 779 year: 2020 ident: 10.1074/jbc.REV120.013930_bib93 article-title: Structure of the RNA-dependent RNA polymerase from COVID-19 virus publication-title: Science doi: 10.1126/science.abb7498 – volume: 103 start-page: 12885 year: 2006 ident: 10.1074/jbc.REV120.013930_bib195 article-title: Severe acute respiratory syndrome coronavirus nsp1 protein suppresses host gene expression by promoting host mRNA degradation publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.0603144103 – volume: 89 start-page: 2080 year: 2015 ident: 10.1074/jbc.REV120.013930_bib312 article-title: Mutations across murine hepatitis virus nsp4 alter virus fitness and membrane modifications publication-title: J. Virol doi: 10.1128/JVI.02776-14 – volume: 11 start-page: e0165077 year: 2016 ident: 10.1074/jbc.REV120.013930_bib134 article-title: Characterization of the role of hexamer AGUAAA and poly(A) tail in coronavirus polyadenylation publication-title: PLoS ONE doi: 10.1371/journal.pone.0165077 – volume: 106 start-page: 2366 year: 2005 ident: 10.1074/jbc.REV120.013930_bib206 article-title: Chemokine up-regulation in SARS-coronavirus-infected, monocyte-derived human dendritic cells publication-title: Blood doi: 10.1182/blood-2004-10-4166 – volume: 174 start-page: 11 year: 2011 ident: 10.1074/jbc.REV120.013930_bib304 article-title: A structural analysis of M protein in coronavirus assembly and morphology publication-title: J. Struct. Biol doi: 10.1016/j.jsb.2010.11.021 – volume: 3 start-page: 1013 year: 2002 ident: 10.1074/jbc.REV120.013930_bib260 article-title: To kill or be killed: viral evasion of apoptosis publication-title: Nat. Immunol doi: 10.1038/ni1102-1013 – volume: 149 start-page: 58 year: 2018 ident: 10.1074/jbc.REV120.013930_bib309 article-title: Nsp3 of coronaviruses: structures and functions of a large multi-domain protein publication-title: Antiviral Res doi: 10.1016/j.antiviral.2017.11.001 – volume: 86 start-page: 10173 year: 2012 ident: 10.1074/jbc.REV120.013930_bib127 article-title: Signatures of host mRNA 5′ terminus for efficient hantavirus cap snatching publication-title: J. Virol doi: 10.1128/JVI.05560-11 – volume: 10 start-page: e1004502 year: 2014 ident: 10.1074/jbc.REV120.013930_bib22 article-title: Coronavirus cell entry occurs through the endo-/lysosomal pathway in a proteolysis-dependent manner publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1004502 – volume: 113 start-page: 12262 year: 2016 ident: 10.1074/jbc.REV120.013930_bib28 article-title: Proteolytic processing of Middle East respiratory syndrome coronavirus spikes expands virus tropism publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.1608147113 – volume: 10 start-page: 2342 year: 2019 ident: 10.1074/jbc.REV120.013930_bib92 article-title: Structure of the SARS-CoV nsp12 polymerase bound to nsp7 and nsp8 co-factors publication-title: Nat. Commun doi: 10.1038/s41467-019-10280-3 – volume: 27 start-page: 325 year: 2020 ident: 10.1074/jbc.REV120.013930_bib189 article-title: Genome composition and divergence of the novel coronavirus (2019-nCoV) originating in China publication-title: Cell Host Microbe doi: 10.1016/j.chom.2020.02.001 – volume: 23 start-page: 986 year: 2013 ident: 10.1074/jbc.REV120.013930_bib17 article-title: Structure of MERS-CoV spike receptor-binding domain complexed with human receptor DPP4 publication-title: Cell Res doi: 10.1038/cr.2013.92 – volume: 1 start-page: 110 year: 2018 ident: 10.1074/jbc.REV120.013930_bib124 article-title: Evaluation of a recombination-resistant coronavirus as a broadly applicable, rapidly implementable vaccine platform publication-title: Commun. Biol doi: 10.1038/s42003-018-0175-7 – volume: 77 start-page: 4597 year: 2003 ident: 10.1074/jbc.REV120.013930_bib303 article-title: The small envelope protein E is not essential for murine coronavirus replication publication-title: J. Virol doi: 10.1128/JVI.77.8.4597-4608.2003 – volume: 361 start-page: 243 year: 2006 ident: 10.1074/jbc.REV120.013930_bib316 article-title: RNA recognition and cleavage by the SARS coronavirus endoribonuclease publication-title: J. Mol. Biol doi: 10.1016/j.jmb.2006.06.021 – volume: 78 start-page: 7833 year: 2004 ident: 10.1074/jbc.REV120.013930_bib128 article-title: Human coronavirus 229E nonstructural protein 13: characterization of duplex-unwinding, nucleoside triphosphatase, and RNA 5′-triphosphatase activities publication-title: J. Virol doi: 10.1128/JVI.78.14.7833-7838.2004 – volume: 19 start-page: 181 year: 2016 ident: 10.1074/jbc.REV120.013930_bib209 article-title: Dysregulated type I interferon and inflammatory monocyte-macrophage responses cause lethal pneumonia in SARS-CoV-infected mice publication-title: Cell Host Microbe doi: 10.1016/j.chom.2016.01.007 – volume: 235 start-page: 1 year: 1997 ident: 10.1074/jbc.REV120.013930_bib123 article-title: New insights into the mechanisms of RNA recombination publication-title: Virology doi: 10.1006/viro.1997.8681 – volume: 368 start-page: 948 year: 2020 ident: 10.1074/jbc.REV120.013930_bib47 article-title: A strategic approach to COVID-19 vaccine R&D publication-title: Science doi: 10.1126/science.abc5312 – volume: 75 start-page: 4439 year: 2001 ident: 10.1074/jbc.REV120.013930_bib42 article-title: Generation of a highly pathogenic avian influenza A virus from an avirulent field isolate by passaging in chickens publication-title: J. Virol doi: 10.1128/JVI.75.9.4439-4443.2001 – volume: 580 start-page: 6807 year: 2006 ident: 10.1074/jbc.REV120.013930_bib250 article-title: Augmentation of chemokine production by severe acute respiratory syndrome coronavirus 3a/X1 and 7a/X4 proteins through NF-κB activation publication-title: FEBS Lett doi: 10.1016/j.febslet.2006.11.046 – volume: 3 start-page: 237 year: 2016 ident: 10.1074/jbc.REV120.013930_bib4 article-title: Structure, function, and evolution of coronavirus spike proteins publication-title: Annu. Rev. Virol doi: 10.1146/annurev-virology-110615-042301 – volume: 5 start-page: 279 year: 2013 ident: 10.1074/jbc.REV120.013930_bib53 article-title: Altering SARS coronavirus frameshift efficiency affects genomic and subgenomic RNA production publication-title: Viruses doi: 10.3390/v5010279 – volume: 91 start-page: e02116 year: 2017 ident: 10.1074/jbc.REV120.013930_bib229 article-title: The severe acute respiratory syndrome coronavirus nucleocapsid inhibits type I interferon production by interfering with TRIM25-mediated RIG-I ubiquitination publication-title: J. Virol doi: 10.1128/JVI.02143-16 – volume: 64 start-page: 5367 year: 1990 ident: 10.1074/jbc.REV120.013930_bib299 article-title: Assembly of coronavirus spike protein into trimers and its role in epitope expression publication-title: J. Virol doi: 10.1128/jvi.64.11.5367-5375.1990 – volume: 13 start-page: 751 year: 2006 ident: 10.1074/jbc.REV120.013930_bib300 article-title: Architecture of the SARS coronavirus prefusion spike publication-title: Nat. Struct. Mol. Biol doi: 10.1038/nsmb1123 – volume: 7 start-page: e1002059 year: 2011 ident: 10.1074/jbc.REV120.013930_bib131 article-title: Crystal structure and functional analysis of the SARS-coronavirus RNA cap 2′-O-methyltransferase nsp10/nsp16 complex publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1002059 – volume: 78 start-page: 779 year: 2020 ident: 10.1074/jbc.REV120.013930_bib37 article-title: A multibasic cleavage site in the spike protein of SARS-CoV-2 is essential for infection of human lung cells publication-title: Mol. Cell doi: 10.1016/j.molcel.2020.04.022 – volume: 82 start-page: 7212 year: 2008 ident: 10.1074/jbc.REV120.013930_bib324 article-title: Severe acute respiratory syndrome coronavirus protein 6 accelerates murine hepatitis virus infections by more than one mechanism publication-title: J. Virol doi: 10.1128/JVI.02406-07 – volume: 92 start-page: 216 year: 2018 ident: 10.1074/jbc.REV120.013930_bib318 article-title: Structural and biochemical characterization of endoribonuclease Nsp15 encoded by Middle East respiratory syndrome coronavirus publication-title: J. Virol doi: 10.1128/JVI.00893-18 – volume: 111 start-page: E3900 year: 2014 ident: 10.1074/jbc.REV120.013930_bib91 article-title: One severe acute respiratory syndrome coronavirus protein complex integrates processive RNA polymerase and exonuclease activities publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.1323705111 – volume: 580 start-page: 3643 year: 2006 ident: 10.1074/jbc.REV120.013930_bib326 article-title: Expression and functional characterization of the putative protein 8b of the severe acute respiratory syndrome-associated coronavirus publication-title: FEBS Lett doi: 10.1016/j.febslet.2006.05.051 – volume: 78 start-page: 5619 year: 2004 ident: 10.1074/jbc.REV120.013930_bib108 article-title: Multiple enzymatic activities associated with severe acute respiratory syndrome coronavirus helicase publication-title: J. Virol doi: 10.1128/JVI.78.11.5619-5632.2004 – volume: 82 start-page: 4471 year: 2008 ident: 10.1074/jbc.REV120.013930_bib196 article-title: Severe acute respiratory syndrome coronavirus nsp1 suppresses host gene expression, including that of type I interferon, in infected cells publication-title: J. Virol doi: 10.1128/JVI.02472-07 – volume: 7 start-page: e1002433 year: 2011 ident: 10.1074/jbc.REV120.013930_bib81 article-title: SARS coronavirus nsp1 protein induces template-dependent endonucleolytic cleavage of mRNAs: viral mRNAs are resistant to nsp1-induced RNA cleavage publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1002433 – volume: 80 start-page: 5927 year: 2006 ident: 10.1074/jbc.REV120.013930_bib149 article-title: Ultrastructure and origin of membrane vesicles associated with the severe acute respiratory syndrome coronavirus replication complex publication-title: J. Virol doi: 10.1128/JVI.02501-05 – volume: 71 start-page: 9278 year: 1997 ident: 10.1074/jbc.REV120.013930_bib161 article-title: Protein interactions during coronavirus assembly publication-title: J. Virol doi: 10.1128/jvi.71.12.9278-9284.1997 – volume: 579 start-page: 6699 year: 2005 ident: 10.1074/jbc.REV120.013930_bib267 article-title: Adenovirus-mediated expression of the C-terminal domain of SARS-CoV spike protein is sufficient to induce apoptosis in Vero E6 cells publication-title: FEBS Lett doi: 10.1016/j.febslet.2005.10.065 – volume: 6 start-page: e1000896 year: 2010 ident: 10.1074/jbc.REV120.013930_bib114 article-title: Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1000896 – volume: 41 start-page: 212 year: 2011 ident: 10.1074/jbc.REV120.013930_bib219 article-title: Coagulation and autoimmunity in scleroderma interstitial lung disease publication-title: Semin. Arthritis Rheum doi: 10.1016/j.semarthrit.2010.10.002 – volume: 303 start-page: 1666 year: 2004 ident: 10.1074/jbc.REV120.013930_bib192 article-title: Molecular evolution of the SARS coronavirus during the course of the SARS epidemic in China publication-title: Science doi: 10.1126/science.1092002 – volume: 11 start-page: 411 year: 2005 ident: 10.1074/jbc.REV120.013930_bib280 article-title: Longitudinally profiling neutralizing antibody response to SARS coronavirus with pseudotypes publication-title: Emerg. Infect. Dis doi: 10.3201/eid1103.040906 – volume: 24 start-page: 44 year: 2005 ident: 10.1074/jbc.REV120.013930_bib289 article-title: Use of convalescent plasma therapy in SARS patients in Hong Kong publication-title: Eur. J. Clin. Microbiol. Infect. Dis doi: 10.1007/s10096-004-1271-9 – volume: 93 start-page: 275 year: 2012 ident: 10.1074/jbc.REV120.013930_bib231 article-title: Bat severe acute respiratory syndrome-like coronavirus ORF3b homologues display different interferon antagonist activities publication-title: J. Gen. Virol doi: 10.1099/vir.0.033589-0 – volume: 415 start-page: 69 year: 2011 ident: 10.1074/jbc.REV120.013930_bib301 article-title: Subcellular location and topology of severe acute respiratory syndrome coronavirus envelope protein publication-title: Virology doi: 10.1016/j.virol.2011.03.029 – volume: 83 start-page: 2368 year: 2009 ident: 10.1074/jbc.REV120.013930_bib323 article-title: Severe acute respiratory syndrome coronavirus protein 6 is required for optimal replication publication-title: J. Virol doi: 10.1128/JVI.02371-08 – volume: 350 start-page: 358 year: 2006 ident: 10.1074/jbc.REV120.013930_bib39 article-title: Furin cleavage of the SARS coronavirus spike glycoprotein enhances cell-cell fusion but does not affect virion entry publication-title: Virology doi: 10.1016/j.virol.2006.02.003 – volume: 5 start-page: e01114 year: 2014 ident: 10.1074/jbc.REV120.013930_bib210 article-title: Pathogenic influenza viruses and coronaviruses utilize similar and contrasting approaches to control interferon-stimulated gene responses publication-title: mBio doi: 10.1128/mBio.01174-14 – volume: 309 start-page: 1864 year: 2005 ident: 10.1074/jbc.REV120.013930_bib286 article-title: Structure of SARS coronavirus spike receptor-binding domain complexed with receptor publication-title: Science doi: 10.1126/science.1116480 – volume: 75 start-page: 8173 year: 2001 ident: 10.1074/jbc.REV120.013930_bib20 article-title: Targeted disruption of the Ceacam1 (MHVR) gene leads to reduced susceptibility of mice to mouse hepatitis virus infection publication-title: J. Virol doi: 10.1128/JVI.75.17.8173-8186.2001 – volume: 38 start-page: 203 year: 2010 ident: 10.1074/jbc.REV120.013930_bib94 article-title: The RNA polymerase activity of SARS-coronavirus nsp12 is primer dependent publication-title: Nucleic Acids Res doi: 10.1093/nar/gkp904 – volume: 20 start-page: 363 year: 2020 ident: 10.1074/jbc.REV120.013930_bib44 article-title: The trinity of COVID-19: immunity, inflammation and intervention publication-title: Nat. Rev. Immunol doi: 10.1038/s41577-020-0311-8 – volume: 85 start-page: 873 year: 2011 ident: 10.1074/jbc.REV120.013930_bib12 article-title: A transmembrane serine protease is linked to the severe acute respiratory syndrome coronavirus receptor and activates virus entry publication-title: J. Virol doi: 10.1128/JVI.02062-10 – volume: 43 start-page: 8416 year: 2015 ident: 10.1074/jbc.REV120.013930_bib96 article-title: Discovery of an essential nucleotidylating activity associated with a newly delineated conserved domain in the RNA polymerase-containing protein of all nidoviruses publication-title: Nucleic Acids Res doi: 10.1093/nar/gkv838 – volume: 82 start-page: 9829 year: 2008 ident: 10.1074/jbc.REV120.013930_bib228 article-title: Murine coronavirus mouse hepatitis virus is recognized by MDA5 and induces type I interferon in brain macrophages/microglia publication-title: J. Virol doi: 10.1128/JVI.01199-08 – volume: 84 start-page: 280 year: 2010 ident: 10.1074/jbc.REV120.013930_bib311 article-title: Murine hepatitis virus nonstructural protein 4 regulates virus-induced membrane modifications and replication complex function publication-title: J. Virol doi: 10.1128/JVI.01772-09 – volume: 478 start-page: 75 year: 2015 ident: 10.1074/jbc.REV120.013930_bib164 article-title: Coronavirus envelope (E) protein remains at the site of assembly publication-title: Virology doi: 10.1016/j.virol.2015.02.005 – volume: 387 start-page: 402 year: 2009 ident: 10.1074/jbc.REV120.013930_bib325 article-title: The 8ab protein of SARS-CoV is a luminal ER membrane-associated protein and induces the activation of ATF6 publication-title: Virology doi: 10.1016/j.virol.2009.02.021 – volume: 81 start-page: 6346 year: 2007 ident: 10.1074/jbc.REV120.013930_bib273 article-title: Induction of apoptosis by the severe acute respiratory syndrome coronavirus 7a protein is dependent on its interaction with the Bcl-XL protein publication-title: J. Virol doi: 10.1128/JVI.00090-07 – volume: 361 start-page: 1767 year: 2003 ident: 10.1074/jbc.REV120.013930_bib284 article-title: Clinical progression and viral load in a community outbreak of coronavirus-associated SARS pneumonia: a prospective study publication-title: Lancet doi: 10.1016/S0140-6736(03)13412-5 – volume: 176 start-page: 104742 year: 2020 ident: 10.1074/jbc.REV120.013930_bib36 article-title: The spike glycoprotein of the new coronavirus 2019-nCoV contains a furin-like cleavage site absent in CoV of the same clade publication-title: Antiviral Res doi: 10.1016/j.antiviral.2020.104742 – volume: 85 start-page: 4122 year: 2011 ident: 10.1074/jbc.REV120.013930_bib10 article-title: Evidence that TMPRSS2 activates the severe acute respiratory syndrome coronavirus spike protein for membrane fusion and reduces viral control by the humoral immune response publication-title: J. Virol doi: 10.1128/JVI.02232-10 – volume: 133 start-page: 113 year: 2008 ident: 10.1074/jbc.REV120.013930_bib187 article-title: SARS coronavirus accessory proteins publication-title: Virus Res doi: 10.1016/j.virusres.2007.10.009 – volume: 84 start-page: 4619 year: 2010 ident: 10.1074/jbc.REV120.013930_bib63 article-title: Deubiquitinating and interferon antagonism activities of coronavirus papain-like proteases publication-title: J. Virol doi: 10.1128/JVI.02406-09 – volume: 81 start-page: 12135 year: 2007 ident: 10.1074/jbc.REV120.013930_bib113 article-title: High fidelity of murine hepatitis virus replication is decreased in nsp14 exoribonuclease mutants publication-title: J. Virol doi: 10.1128/JVI.01296-07 – volume: 81 start-page: 548 year: 2007 ident: 10.1074/jbc.REV120.013930_bib232 article-title: Severe acute respiratory syndrome coronavirus open reading frame (ORF) 3b, ORF 6, and nucleocapsid proteins function as interferon antagonists publication-title: J. Virol doi: 10.1128/JVI.01782-06 – volume: 12 start-page: 844 year: 2010 ident: 10.1074/jbc.REV120.013930_bib150 article-title: Qualitative and quantitative ultrastructural analysis of the membrane rearrangements induced by coronavirus publication-title: Cell. Microbiol doi: 10.1111/j.1462-5822.2010.01437.x – volume: 18 start-page: 255 year: 2006 ident: 10.1074/jbc.REV120.013930_bib293 article-title: Differentiation of memory B and T cells publication-title: Curr. Opin. Immunol doi: 10.1016/j.coi.2006.03.020 – volume: 106 start-page: 12067 year: 2009 ident: 10.1074/jbc.REV120.013930_bib226 article-title: 5′-Triphosphate RNA requires base-paired structures to activate antiviral signaling via RIG-I publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.0900971106 – volume: 286 start-page: 3222 year: 2019 ident: 10.1074/jbc.REV120.013930_bib74 article-title: Interaction of coronavirus nucleocapsid protein with the 5′- and 3′- ends of the coronavirus genome is involved in genome circularization and negative-strand RNA synthesis publication-title: FEBS J doi: 10.1111/febs.14863 – volume: 9 start-page: e1003565 year: 2013 ident: 10.1074/jbc.REV120.013930_bib115 article-title: Coronaviruses lacking exoribonuclease activity are susceptible to lethal mutagenesis: evidence for proofreading and potential therapeutics publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1003565 – volume: 93 start-page: e00319 year: 2019 ident: 10.1074/jbc.REV120.013930_bib199 article-title: C19ORF66 broadly escapes virus-induced endonuclease cleavage and restricts Kaposi's sarcoma-associated herpesvirus publication-title: J. Virol doi: 10.1128/JVI.00373-19 – volume: 361 start-page: 18 year: 2007 ident: 10.1074/jbc.REV120.013930_bib242 article-title: Group 2 coronaviruses prevent immediate early interferon induction by protection of viral RNA from host cell recognition publication-title: Virology doi: 10.1016/j.virol.2007.01.020 – volume: 382 start-page: 1177 year: 2020 ident: 10.1074/jbc.REV120.013930_bib283 article-title: SARS-CoV-2 viral load in upper respiratory specimens of infected patients publication-title: N. Engl. J. Med doi: 10.1056/NEJMc2001737 – volume: 181 start-page: 271 year: 2020 ident: 10.1074/jbc.REV120.013930_bib6 article-title: SARS-CoV-2 cell entry depends on ACE2 and TMPRSS2 and is blocked by a clinically proven protease inhibitor publication-title: Cell doi: 10.1016/j.cell.2020.02.052 – volume: 82 start-page: 300 year: 2008 ident: 10.1074/jbc.REV120.013930_bib215 article-title: Type I interferons are essential in controlling neurotropic coronavirus infection irrespective of functional CD8 T cells publication-title: J. Virol doi: 10.1128/JVI.01794-07 – volume: 78 start-page: 980 year: 2004 ident: 10.1074/jbc.REV120.013930_bib78 article-title: Sequence motifs involved in the regulation of discontinuous coronavirus subgenomic RNA synthesis publication-title: J. Virol doi: 10.1128/JVI.78.2.980-994.2004 – volume: 10 start-page: e1004320 year: 2014 ident: 10.1074/jbc.REV120.013930_bib253 article-title: The PDZ-binding motif of severe acute respiratory syndrome coronavirus envelope protein is a determinant of viral pathogenesis publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1004320 – volume: 579 start-page: 265 year: 2020 ident: 10.1074/jbc.REV120.013930_bib188 article-title: A new coronavirus associated with human respiratory disease in China publication-title: Nature doi: 10.1038/s41586-020-2008-3 – volume: 8 start-page: e76469 year: 2013 ident: 10.1074/jbc.REV120.013930_bib16 article-title: Role of the spike glycoprotein of human Middle East respiratory syndrome coronavirus (MERS-CoV) in virus entry and syncytia formation publication-title: PLoS ONE doi: 10.1371/journal.pone.0076469 – volume: 87 start-page: 5502 year: 2013 ident: 10.1074/jbc.REV120.013930_bib18 article-title: The spike protein of the emerging betacoronavirus EMC uses a novel coronavirus receptor for entry, can be activated by TMPRSS2, and is targeted by neutralizing antibodies publication-title: J. Virol doi: 10.1128/JVI.00128-13 – volume: 82 start-page: 11318 year: 2008 ident: 10.1074/jbc.REV120.013930_bib3 article-title: The M, E, and N structural proteins of the severe acute respiratory syndrome coronavirus are required for efficient assembly, trafficking, and release of virus-like particles publication-title: J. Virol doi: 10.1128/JVI.01052-08 – volume: 479–480 start-page: 66 year: 2015 ident: 10.1074/jbc.REV120.013930_bib126 article-title: Innate immune restriction and antagonism of viral RNA lacking 2′-O methylation publication-title: Virology doi: 10.1016/j.virol.2015.01.019 – volume: 537 start-page: 198 year: 2019 ident: 10.1074/jbc.REV120.013930_bib172 article-title: Coronavirus genomic RNA packaging publication-title: Virology doi: 10.1016/j.virol.2019.08.031 – volume: 16 start-page: 1134 year: 2009 ident: 10.1074/jbc.REV120.013930_bib204 article-title: A two-pronged strategy to suppress host protein synthesis by SARS coronavirus Nsp1 protein publication-title: Nat. Struct. Mol. Biol doi: 10.1038/nsmb.1680 – volume: 1 start-page: 111 year: 2014 ident: 10.1074/jbc.REV120.013930_bib90 article-title: Thinking outside the triangle: replication fidelity of the largest RNA viruses publication-title: Annu. Rev. Virol doi: 10.1146/annurev-virology-031413-085507 – volume: 426 start-page: 450 year: 2003 ident: 10.1074/jbc.REV120.013930_bib8 article-title: Angiotensin-converting enzyme 2 is a functional receptor for the SARS coronavirus publication-title: Nature doi: 10.1038/nature02145 – volume: 48 start-page: 1 year: 1997 ident: 10.1074/jbc.REV120.013930_bib185 article-title: The molecular biology of coronaviruses publication-title: Adv. Virus Res doi: 10.1016/S0065-3527(08)60286-9 – volume: 494 start-page: 491 year: 2001 ident: 10.1074/jbc.REV120.013930_bib71 article-title: Mouse hepatitis virus minus-strand templates are unstable and turnover during viral replication publication-title: Adv. Exp. Med. Biol doi: 10.1007/978-1-4615-1325-4_71 – volume: 14 start-page: 154 year: 2008 ident: 10.1074/jbc.REV120.013930_bib120 article-title: Engineering attenuated virus vaccines by controlling replication fidelity publication-title: Nat. Med doi: 10.1038/nm1726 – volume: 85 start-page: 4572 year: 2011 ident: 10.1074/jbc.REV120.013930_bib68 article-title: Mobility and interactions of coronavirus nonstructural protein 4 publication-title: J. Virol doi: 10.1128/JVI.00042-11 – volume: 96 start-page: 127 year: 2016 ident: 10.1074/jbc.REV120.013930_bib73 article-title: Coronavirus cis-acting RNA elements publication-title: Adv. Virus Res doi: 10.1016/bs.aivir.2016.08.007 – volume: 300 start-page: 1763 year: 2003 ident: 10.1074/jbc.REV120.013930_bib62 article-title: Coronavirus main proteinase (3CLpro) structure: basis for design of anti-SARS drugs publication-title: Science doi: 10.1126/science.1085658 – volume: 85 start-page: 6381 year: 2011 ident: 10.1074/jbc.REV120.013930_bib136 article-title: Blocking eIF4E-eIF4G interaction as a strategy to impair coronavirus replication publication-title: J. Virol doi: 10.1128/JVI.00078-11 – volume: 106 start-page: 3484 year: 2009 ident: 10.1074/jbc.REV120.013930_bib129 article-title: Functional screen reveals SARS coronavirus nonstructural protein nsp14 as a novel cap N7 methyltransferase publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.0808790106 – volume: 18 start-page: 1825 year: 1990 ident: 10.1074/jbc.REV120.013930_bib52 article-title: The primary structure and expression of the second open reading frame of the polymerase gene of the coronavirus MHV-A59; a highly conserved polymerase is expressed by an efficient ribosomal frameshifting mechanism publication-title: Nucleic Acids Res doi: 10.1093/nar/18.7.1825 – volume: 494 start-page: 83 year: 2001 ident: 10.1074/jbc.REV120.013930_bib179 article-title: Analysis of nonessential gene function in recombinant MHV-JHM. Gene 4 knockout recombinant virus publication-title: Adv. Exp. Med. Biol doi: 10.1007/978-1-4615-1325-4_13 – volume: 581 start-page: 215 year: 2020 ident: 10.1074/jbc.REV120.013930_bib34 article-title: Structure of the SARS-CoV-2 spike receptor-binding domain bound to the ACE2 receptor publication-title: Nature doi: 10.1038/s41586-020-2180-5 – volume: 101 start-page: 122 year: 2014 ident: 10.1074/jbc.REV120.013930_bib138 article-title: SARS-CoV ORF1b-encoded nonstructural proteins 12-16: replicative enzymes as antiviral targets publication-title: Antiviral Res doi: 10.1016/j.antiviral.2013.11.006 – volume: 12 start-page: 341 year: 2004 ident: 10.1074/jbc.REV120.013930_bib102 article-title: The nsp9 replicase protein of SARS-coronavirus, structure and functional insights publication-title: Structure doi: 10.1016/j.str.2004.01.016 – volume: 11 start-page: e01610 year: 2020 ident: 10.1074/jbc.REV120.013930_bib193 article-title: Discovery and Genomic Characterization of a 382-Nucleotide Deletion in ORF7b and ORF8 during the Early Evolution of SARS-CoV-2 publication-title: bioRxiv – volume: 47 start-page: 6538 year: 2019 ident: 10.1074/jbc.REV120.013930_bib106 article-title: Delicate structural coordination of the severe acute respiratory syndrome coronavirus Nsp13 upon ATP hydrolysis publication-title: Nucleic Acids Res doi: 10.1093/nar/gkz409 – volume: 10 start-page: 320 year: 2004 ident: 10.1074/jbc.REV120.013930_bib148 article-title: Ultrastructural characterization of SARS coronavirus publication-title: Emerg. Infect. Dis doi: 10.3201/eid1002.030913 – volume: 131 start-page: 339 year: 1995 ident: 10.1074/jbc.REV120.013930_bib162 article-title: Envelope glycoprotein interactions in coronavirus assembly publication-title: J. Cell Biol doi: 10.1083/jcb.131.2.339 – volume: 79 start-page: 11335 year: 2005 ident: 10.1074/jbc.REV120.013930_bib236 article-title: A severe acute respiratory syndrome-associated coronavirus-specific protein enhances virulence of an attenuated murine coronavirus publication-title: J. Virol doi: 10.1128/JVI.79.17.11335-11342.2005 – volume: 81 start-page: 11620 year: 2007 ident: 10.1074/jbc.REV120.013930_bib201 article-title: Severe acute respiratory syndrome coronavirus evades antiviral signaling: role of nsp1 and rational design of an attenuated strain publication-title: J. Virol doi: 10.1128/JVI.00702-07 – volume: 73 start-page: 1907 year: 2005 ident: 10.1074/jbc.REV120.013930_bib257 article-title: Apoptosis, pyroptosis, and necrosis: mechanistic description of dead and dying eukaryotic cells publication-title: Infect. Immun doi: 10.1128/IAI.73.4.1907-1916.2005 – volume: 296 start-page: 177 year: 2002 ident: 10.1074/jbc.REV120.013930_bib176 article-title: The group-specific murine coronavirus genes are not essential, but their deletion, by reverse genetics, is attenuating in the natural host publication-title: Virology doi: 10.1006/viro.2002.1412 – volume: 30 start-page: 343 year: 2020 ident: 10.1074/jbc.REV120.013930_bib46 article-title: Inhibition of SARS-CoV-2 (previously 2019-nCoV) infection by a highly potent pan-coronavirus fusion inhibitor targeting its spike protein that harbors a high capacity to mediate membrane fusion publication-title: Cell Res doi: 10.1038/s41422-020-0305-x – volume: 196 start-page: 405 year: 2007 ident: 10.1074/jbc.REV120.013930_bib275 article-title: Open reading frame 8a of the human severe acute respiratory syndrome coronavirus not only promotes viral replication but also induces apoptosis publication-title: J. Infect. Dis doi: 10.1086/519166 – volume: 56 start-page: 919 year: 2005 ident: 10.1074/jbc.REV120.013930_bib291 article-title: Experience of using convalescent plasma for severe acute respiratory syndrome among healthcare workers in a Taiwan hospital publication-title: J. Antimicrob. Chemother doi: 10.1093/jac/dki346 – volume: 922 start-page: 1 year: 2012 ident: 10.1074/jbc.REV120.013930_bib104 article-title: Functions of single-strand DNA-binding proteins in DNA replication, recombination, and repair publication-title: Methods Mol. Biol doi: 10.1007/978-1-62703-032-8_1 – volume: 361 start-page: 1773 year: 2003 ident: 10.1074/jbc.REV120.013930_bib218 article-title: Lung pathology of fatal severe acute respiratory syndrome publication-title: Lancet doi: 10.1016/S0140-6736(03)13413-7 – volume: 213 start-page: 904 year: 2016 ident: 10.1074/jbc.REV120.013930_bib266 article-title: Middle East respiratory syndrome coronavirus efficiently infects human primary T lymphocytes and activates the extrinsic and intrinsic apoptosis pathways publication-title: J. Infect. Dis doi: 10.1093/infdis/jiv380 – volume: 79 start-page: 8065 year: 2005 ident: 10.1074/jbc.REV120.013930_bib182 article-title: Gene 5 of the avian coronavirus infectious bronchitis virus is not essential for replication publication-title: J. Virol doi: 10.1128/JVI.79.13.8065-8078.2005 – volume: 7 start-page: e00212 year: 2016 ident: 10.1074/jbc.REV120.013930_bib237 article-title: Middle East respiratory syndrome coronavirus NS4b protein inhibits host RNase L activation publication-title: mBio doi: 10.1128/mBio.00258-16 – volume: 96 start-page: 21 year: 2012 ident: 10.1074/jbc.REV120.013930_bib146 article-title: The viral RNA capping machinery as a target for antiviral drugs publication-title: Antiviral Res doi: 10.1016/j.antiviral.2012.07.007 – volume: 18 start-page: 1820 year: 2012 ident: 10.1074/jbc.REV120.013930_bib118 article-title: A live, impaired-fidelity coronavirus vaccine protects in an aged, immunocompromised mouse model of lethal disease publication-title: Nat. Med doi: 10.1038/nm.2972 – volume: 77 start-page: 2922 year: 2003 ident: 10.1074/jbc.REV120.013930_bib175 article-title: Nucleocapsid-independent specific viral RNA packaging via viral envelope protein and viral RNA signal publication-title: J. Virol doi: 10.1128/JVI.77.5.2922-2927.2003 – volume: 13 start-page: 4873 year: 2008 ident: 10.1074/jbc.REV120.013930_bib55 article-title: The role of programmed-1 ribosomal frameshifting in coronavirus propagation publication-title: Front. Biosci doi: 10.2741/3046 – volume: 330 start-page: 322 year: 2004 ident: 10.1074/jbc.REV120.013930_bib163 article-title: SARS coronavirus E protein forms cation-selective ion channels publication-title: Virology doi: 10.1016/j.virol.2004.09.033 – volume: 89 start-page: 9029 year: 2015 ident: 10.1074/jbc.REV120.013930_bib307 article-title: The nucleocapsid protein of coronaviruses acts as a viral suppressor of RNA silencing in mammalian cells publication-title: J. Virol doi: 10.1128/JVI.01331-15 – volume: 8 start-page: 237 year: 2011 ident: 10.1074/jbc.REV120.013930_bib72 article-title: RNA-RNA and RNA-protein interactions in coronavirus replication and transcription publication-title: RNA Biol doi: 10.4161/rna.8.2.14991 – volume: 56 start-page: 4718 year: 2012 ident: 10.1074/jbc.REV120.013930_bib145 article-title: Severe acute respiratory syndrome coronavirus replication inhibitor that interferes with the nucleic acid unwinding of the viral helicase publication-title: Antimicrob. Agents Chemother doi: 10.1128/AAC.00957-12 – volume: 13 start-page: 461 year: 2015 ident: 10.1074/jbc.REV120.013930_bib261 article-title: Viral apoptotic mimicry publication-title: Nat. Rev. Microbiol doi: 10.1038/nrmicro3469 – volume: 311 start-page: 870 year: 2003 ident: 10.1074/jbc.REV120.013930_bib252 article-title: Activation of AP-1 signal transduction pathway by SARS coronavirus nucleocapsid protein publication-title: Biochem. Biophys. Res. Commun doi: 10.1016/j.bbrc.2003.10.075 – volume: 93 start-page: e00291 year: 2019 ident: 10.1074/jbc.REV120.013930_bib99 article-title: Identification and characterization of a human coronavirus 229E nonstructural protein 8-associated RNA 3′-terminal adenylyltransferase activity publication-title: J. Virol doi: 10.1128/JVI.00291-19 – volume: 362 start-page: 293 year: 2003 ident: 10.1074/jbc.REV120.013930_bib223 article-title: Treatment of SARS with human interferons publication-title: Lancet doi: 10.1016/S0140-6736(03)13973-6 – volume: 68 start-page: 8131 year: 1994 ident: 10.1074/jbc.REV120.013930_bib133 article-title: Identification of the cis-acting signal for minus-strand RNA synthesis of a murine coronavirus: implications for the role of minus-strand RNA in RNA replication and transcription publication-title: J. Virol doi: 10.1128/jvi.68.12.8131-8140.1994 – volume: 77 start-page: 7890 year: 2003 ident: 10.1074/jbc.REV120.013930_bib169 article-title: Transmissible gastroenteritis coronavirus packaging signal is located at the 5′ end of the virus genome publication-title: J. Virol doi: 10.1128/JVI.77.14.7890-7902.2003 – volume: 83 start-page: 12998 year: 2009 ident: 10.1074/jbc.REV120.013930_bib310 article-title: Nuclear magnetic resonance structure of the nucleic acid-binding domain of severe acute respiratory syndrome coronavirus nonstructural protein 3 publication-title: J. Virol doi: 10.1128/JVI.01253-09 – volume: 202 start-page: 120 year: 2015 ident: 10.1074/jbc.REV120.013930_bib5 article-title: Host cell proteases: critical determinants of coronavirus tropism and pathogenesis publication-title: Virus Res doi: 10.1016/j.virusres.2014.11.021 – volume: 91 start-page: 1 year: 2011 ident: 10.1074/jbc.REV120.013930_bib57 article-title: Interference of ribosomal frameshifting by antisense peptide nucleic acids suppresses SARS coronavirus replication publication-title: Antiviral Res doi: 10.1016/j.antiviral.2011.04.009 – volume: 394 start-page: 544 year: 2009 ident: 10.1074/jbc.REV120.013930_bib87 article-title: Coronavirus N protein N-terminal domain (NTD) specifically binds the transcriptional regulatory sequence (TRS) and melts TRS-cTRS RNA duplexes publication-title: J. Mol. Biol doi: 10.1016/j.jmb.2009.09.040 – volume: 10 start-page: 676 year: 2004 ident: 10.1074/jbc.REV120.013930_bib290 article-title: Retrospective comparison of convalescent plasma with continuing high-dose methylprednisolone treatment in SARS patients publication-title: Clin. Microbiol. Infect doi: 10.1111/j.1469-0691.2004.00956.x – volume: 11 start-page: 2251 year: 2020 ident: 10.1074/jbc.REV120.013930_bib288 article-title: A human monoclonal antibody blocking SARS-CoV-2 infection publication-title: Nat. Commun doi: 10.1038/s41467-020-16256-y – volume: 78 start-page: 6723 year: 2004 ident: 10.1074/jbc.REV120.013930_bib272 article-title: A novel severe acute respiratory syndrome coronavirus protein, U274, is transported to the cell surface and undergoes endocytosis publication-title: J. Virol doi: 10.1128/JVI.78.13.6723-6734.2004 – volume: 84 start-page: 2169 year: 2010 ident: 10.1074/jbc.REV120.013930_bib88 article-title: Coronavirus nucleocapsid protein facilitates template switching and is required for efficient transcription publication-title: J. Virol doi: 10.1128/JVI.02011-09 – volume: 87 start-page: 12611 year: 2013 ident: 10.1074/jbc.REV120.013930_bib313 article-title: Chimeric exchange of coronavirus nsp5 proteases (3CLpro) identifies common and divergent regulatory determinants of protease activity publication-title: J. Virol doi: 10.1128/JVI.02050-13 – volume: 76 start-page: 3697 year: 2002 ident: 10.1074/jbc.REV120.013930_bib147 article-title: RNA replication of mouse hepatitis virus takes place at double-membrane vesicles publication-title: J. Virol doi: 10.1128/JVI.76.8.3697-3708.2002 – volume: 10 start-page: 1814 year: 2019 ident: 10.1074/jbc.REV120.013930_bib240 article-title: Antagonism of dsRNA-induced innate immune pathways by NS4a and NS4b accessory proteins during MERS coronavirus infection publication-title: mBio doi: 10.1128/mBio.00319-19 – volume: 26 start-page: 450 year: 2020 ident: 10.1074/jbc.REV120.013930_bib31 article-title: The proximal origin of SARS-CoV-2 publication-title: Nat. Med doi: 10.1038/s41591-020-0820-9 – volume: 383 start-page: 13 year: 2004 ident: 10.1074/jbc.REV120.013930_bib254 article-title: The SARS coronavirus nucleocapsid protein induces actin reorganization and apoptosis in COS-1 cells in the absence of growth factors publication-title: Biochem. J doi: 10.1042/BJ20040984 – volume: 7 start-page: e1002315 year: 2011 ident: 10.1074/jbc.REV120.013930_bib269 article-title: Severe acute respiratory syndrome coronavirus envelope protein regulates cell stress response and apoptosis publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1002315 – volume: 86 start-page: 11128 year: 2012 ident: 10.1074/jbc.REV120.013930_bib197 article-title: Severe acute respiratory syndrome coronavirus nsp1 facilitates efficient propagation in cells through a specific translational shutoff of host mRNA publication-title: J. Virol doi: 10.1128/JVI.01700-12 – volume: 4 start-page: 26 year: 2016 ident: 10.1074/jbc.REV120.013930_bib244 article-title: Human coronaviruses: a review of virus-host interactions publication-title: Diseases doi: 10.3390/diseases4030026 – volume: 311 start-page: 16 year: 2003 ident: 10.1074/jbc.REV120.013930_bib180 article-title: Emergence of a coronavirus infectious bronchitis virus mutant with a truncated 3b gene: functional characterization of the 3b protein in pathogenesis and replication publication-title: Virology doi: 10.1016/S0042-6822(03)00117-X – volume: 8 start-page: 25 year: 2019 ident: 10.1074/jbc.REV120.013930_bib154 article-title: Determination of host proteins composing the microenvironment of coronavirus replicase complexes by proximity-labeling publication-title: Elife doi: 10.7554/eLife.42037 – volume: 9 start-page: e1003760 year: 2013 ident: 10.1074/jbc.REV120.013930_bib111 article-title: Coronaviruses as DNA wannabes: a new model for the regulation of RNA virus replication fidelity publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1003760 – volume: 64 start-page: 6045 year: 1990 ident: 10.1074/jbc.REV120.013930_bib168 article-title: Analysis of efficiently packaged defective interfering RNAs of murine coronavirus: localization of a possible RNA-packaging signal publication-title: J. Virol doi: 10.1128/jvi.64.12.6045-6053.1990 – volume: 284 start-page: 16202 year: 2009 ident: 10.1074/jbc.REV120.013930_bib233 article-title: Severe acute respiratory syndrome coronavirus M protein inhibits type I interferon production by impeding the formation of TRAF3·TANK·TBK1/IKKε complex publication-title: J. Biol. Chem doi: 10.1074/jbc.M109.008227 – volume: 170 start-page: 1136 year: 2007 ident: 10.1074/jbc.REV120.013930_bib262 article-title: Pathology and pathogenesis of severe acute respiratory syndrome publication-title: Am. J. Pathol doi: 10.2353/ajpath.2007.061088 – volume: 213 start-page: 877 year: 2016 ident: 10.1074/jbc.REV120.013930_bib265 article-title: Discovery of T-cell infection and apoptosis by Middle East respiratory syndrome coronavirus publication-title: J. Infect. Dis doi: 10.1093/infdis/jiv381 – volume: 87 start-page: 177 year: 2013 ident: 10.1074/jbc.REV120.013930_bib84 article-title: Long-distance RNA-RNA interactions in the coronavirus genome form high-order structures promoting discontinuous RNA synthesis during transcription publication-title: J. Virol doi: 10.1128/JVI.01782-12 – volume: 3 start-page: e3299 year: 2008 ident: 10.1074/jbc.REV120.013930_bib296 article-title: Genome-wide analysis of protein-protein interactions and involvement of viral proteins in SARS-CoV replication publication-title: PLoS ONE doi: 10.1371/journal.pone.0003299 – volume: 287 start-page: 1 year: 2005 ident: 10.1074/jbc.REV120.013930_bib50 article-title: Coronavirus genome structure and replication publication-title: Curr. Top. Microbiol. Immunol – volume: 218 start-page: 52 year: 1996 ident: 10.1074/jbc.REV120.013930_bib156 article-title: The production of recombinant infectious DI-particles of a murine coronavirus in the absence of helper virus publication-title: Virology doi: 10.1006/viro.1996.0165 – volume: 179 start-page: 104811 year: 2020 ident: 10.1074/jbc.REV120.013930_bib225 article-title: Antiviral activities of type I interferons to SARS-CoV-2 infection publication-title: Antiviral Res doi: 10.1016/j.antiviral.2020.104811 – volume: 89 start-page: 10970 year: 2015 ident: 10.1074/jbc.REV120.013930_bib203 article-title: Middle East respiratory syndrome coronavirus nsp1 inhibits host gene expression by selectively targeting mRNAs transcribed in the nucleus while sparing mRNAs of cytoplasmic origin publication-title: J. Virol doi: 10.1128/JVI.01352-15 – volume: 11 start-page: 362 year: 2004 ident: 10.1074/jbc.REV120.013930_bib277 article-title: Profiles of antibody responses against severe acute respiratory syndrome coronavirus recombinant proteins and their potential use as diagnostic markers publication-title: Clin. Diagn. Lab. Immunol – volume: 122 start-page: 20 year: 2006 ident: 10.1074/jbc.REV120.013930_bib259 article-title: Over-expression of severe acute respiratory syndrome coronavirus 3b protein induces both apoptosis and necrosis in Vero E6 cells publication-title: Virus Res doi: 10.1016/j.virusres.2006.06.005 – volume: 2 start-page: e459 year: 2007 ident: 10.1074/jbc.REV120.013930_bib295 article-title: Analysis of intraviral protein-protein interactions of the SARS coronavirus ORFeome publication-title: PLoS ONE doi: 10.1371/journal.pone.0000459 – volume: 102 start-page: 11876 year: 2005 ident: 10.1074/jbc.REV120.013930_bib24 article-title: Inhibitors of cathepsin L prevent severe acute respiratory syndrome coronavirus entry publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.0505577102 – volume: 78 start-page: 3863 year: 2004 ident: 10.1074/jbc.REV120.013930_bib177 article-title: Live, attenuated coronavirus vaccines through the directed deletion of group-specific genes provide protection against feline infectious peritonitis publication-title: J. Virol doi: 10.1128/JVI.78.8.3863-3871.2004 – volume: 300 start-page: 1399 year: 2003 ident: 10.1074/jbc.REV120.013930_bib183 article-title: The genome sequence of the SARS-associated coronavirus publication-title: Science doi: 10.1126/science.1085953 – volume: 9 start-page: 1392 year: 2002 ident: 10.1074/jbc.REV120.013930_bib263 article-title: In vitro detection of apoptosis in monocytes/macrophages infected with human coronavirus publication-title: Clin. Diagn. Lab. Immunol – volume: 81 start-page: 2418 year: 2007 ident: 10.1074/jbc.REV120.013930_bib167 article-title: The cytoplasmic tail of the severe acute respiratory syndrome coronavirus spike protein contains a novel endoplasmic reticulum retrieval signal that binds COPI and promotes interaction with membrane protein publication-title: J. Virol doi: 10.1128/JVI.02146-06 – volume: 235 start-page: 185 year: 2015 ident: 10.1074/jbc.REV120.013930_bib212 article-title: Molecular pathology of emerging coronavirus infections publication-title: J. Pathol doi: 10.1002/path.4454 – volume: 3 start-page: e109 year: 2007 ident: 10.1074/jbc.REV120.013930_bib235 article-title: Coronavirus non-structural protein 1 is a major pathogenicity factor: implications for the rational design of coronavirus vaccines publication-title: PLoS Pathog doi: 10.1371/journal.ppat.0030109 – volume: 22 start-page: 420 year: 2017 ident: 10.1074/jbc.REV120.013930_bib121 article-title: RNA recombination enhances adaptability and is required for virus spread and virulence publication-title: Cell Host Microbe doi: 10.1016/j.chom.2017.08.006 – volume: 202 start-page: 12 year: 2015 ident: 10.1074/jbc.REV120.013930_bib107 article-title: What we know but do not understand about nidovirus helicases publication-title: Virus Res doi: 10.1016/j.virusres.2014.12.001 – year: 2020 ident: 10.1074/jbc.REV120.013930_bib125 article-title: The coronavirus proofreading exoribonuclease mediates extensive viral recombination publication-title: bioRxiv – volume: 25 start-page: 4933 year: 2006 ident: 10.1074/jbc.REV120.013930_bib97 article-title: A second, non-canonical RNA-dependent RNA polymerase in SARS coronavirus publication-title: EMBO J doi: 10.1038/sj.emboj.7601368 – volume: 93 start-page: 494 year: 2012 ident: 10.1074/jbc.REV120.013930_bib216 article-title: Infection of human alveolar macrophages by human coronavirus strain 229E publication-title: J. Gen. Virol doi: 10.1099/vir.0.038414-0 – volume: 83 start-page: 7221 year: 2009 ident: 10.1074/jbc.REV120.013930_bib308 article-title: Identification of in vivo-interacting domains of the murine coronavirus nucleocapsid protein publication-title: J. Virol doi: 10.1128/JVI.00440-09 – volume: 16 start-page: 249 year: 2012 ident: 10.1074/jbc.REV120.013930_bib58 article-title: Targeting frameshifting in the human immunodeficiency virus publication-title: Expert Opin. Ther. Targets doi: 10.1517/14728222.2012.665879 – volume: 80 start-page: 2684 year: 2006 ident: 10.1074/jbc.REV120.013930_bib208 article-title: Modeling the early events of severe acute respiratory syndrome coronavirus infection in vitro publication-title: J. Virol doi: 10.1128/JVI.80.6.2684-2693.2006 – volume: 41 start-page: 557 year: 1982 ident: 10.1074/jbc.REV120.013930_bib75 article-title: Further characterization of mRNA's of mouse hepatitis virus: presence of common 5-”end nucleotides publication-title: J. Virol doi: 10.1128/jvi.41.2.557-565.1982 – volume: 114 start-page: E4251 year: 2017 ident: 10.1074/jbc.REV120.013930_bib317 article-title: Coronavirus nonstructural protein 15 mediates evasion of dsRNA sensors and limits apoptosis in macrophages publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.1618310114 – volume: 38 start-page: 623 year: 2020 ident: 10.1074/jbc.REV120.013930_bib48 article-title: The architecture of SARS-CoV-2 transcriptome publication-title: Cell – volume: 82 start-page: 3882 year: 2008 ident: 10.1074/jbc.REV120.013930_bib83 article-title: Identification of a coronavirus transcription enhancer publication-title: J. Virol doi: 10.1128/JVI.02622-07 – volume: 115 start-page: 21 year: 2015 ident: 10.1074/jbc.REV120.013930_bib65 article-title: The SARS-coronavirus papain-like protease: structure, function and inhibition by designed antiviral compounds publication-title: Antiviral Res doi: 10.1016/j.antiviral.2014.12.015 – year: 2020 ident: 10.1074/jbc.REV120.013930_bib1 article-title: Coronavirus infections—more than just the common cold publication-title: JAMA doi: 10.1001/jama.2020.0757 – volume: 367 start-page: 1260 year: 2020 ident: 10.1074/jbc.REV120.013930_bib33 article-title: Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation publication-title: Science doi: 10.1126/science.abb2507 – volume: 279 start-page: 43661 year: 2004 ident: 10.1074/jbc.REV120.013930_bib166 article-title: A novel sorting signal for intracellular localization is present in the S protein of a porcine coronavirus but absent from severe acute respiratory syndrome-associated coronavirus publication-title: J. Biol. Chem doi: 10.1074/jbc.M407233200 – volume: 87 start-page: 5182 year: 2013 ident: 10.1074/jbc.REV120.013930_bib159 article-title: Functional analysis of the murine coronavirus genomic RNA packaging signal publication-title: J. Virol doi: 10.1128/JVI.00100-13 – volume: 34 start-page: 743 year: 2003 ident: 10.1074/jbc.REV120.013930_bib217 article-title: Lung pathology of severe acute respiratory syndrome (SARS): a study of 8 autopsy cases from Singapore publication-title: Hum. Pathol doi: 10.1016/S0046-8177(03)00367-8 – volume: 142 start-page: 19 year: 2009 ident: 10.1074/jbc.REV120.013930_bib251 article-title: SARS coronavirus spike protein-induced innate immune response occurs via activation of the NF-κB pathway in human monocyte macrophages in vitro publication-title: Virus Res doi: 10.1016/j.virusres.2009.01.005 – volume: 13 start-page: 59 year: 2006 ident: 10.1074/jbc.REV120.013930_bib306 article-title: Modular organization of SARS coronavirus nucleocapsid protein publication-title: J. Biomed. Sci doi: 10.1007/s11373-005-9035-9 – volume: 78 start-page: 6048 year: 2004 ident: 10.1074/jbc.REV120.013930_bib15 article-title: Cleavage inhibition of the murine coronavirus spike protein by a furin-like enzyme affects cell-cell but not virus-cell fusion publication-title: J. Virol doi: 10.1128/JVI.78.11.6048-6054.2004 – volume: 74 start-page: 8127 year: 2000 ident: 10.1074/jbc.REV120.013930_bib160 article-title: Characterization of the coronavirus M protein and nucleocapsid interaction in infected cells publication-title: J. Virol doi: 10.1128/JVI.74.17.8127-8134.2000 – volume: 104 start-page: 12123 year: 2007 ident: 10.1074/jbc.REV120.013930_bib285 article-title: Potent cross-reactive neutralization of SARS coronavirus isolates by human monoclonal antibodies publication-title: Proc. Natl. Acad. Sci. U.S.A doi: 10.1073/pnas.0701000104 – volume: 8 start-page: e01503 year: 2017 ident: 10.1074/jbc.REV120.013930_bib119 article-title: Proofreading-deficient coronaviruses adapt for increased fitness over long-term passage without reversion of exoribonuclease-inactivating mutations publication-title: mBio doi: 10.1128/mBio.01503-17 – volume: 291 start-page: 9218 year: 2016 ident: 10.1074/jbc.REV120.013930_bib27 article-title: Glycopeptide antibiotics potently inhibit cathepsin L in the late endosome/lysosome and block the entry of Ebola virus, Middle East respiratory syndrome coronavirus (MERS-CoV), and severe acute respiratory syndrome coronavirus (SARS-CoV) publication-title: J. Biol. Chem doi: 10.1074/jbc.M116.716100 – volume: 89 start-page: 6418 year: 2015 ident: 10.1074/jbc.REV120.013930_bib117 article-title: Mutations in coronavirus nonstructural protein 10 decrease virus replication fidelity publication-title: J. Virol doi: 10.1128/JVI.00110-15 – volume: 81 start-page: 853 year: 2000 ident: 10.1074/jbc.REV120.013930_bib59 article-title: Virus-encoded proteinases and proteolytic processing in the Nidovirales publication-title: J. Gen. Virol doi: 10.1099/0022-1317-81-4-853 – volume: 479–480 start-page: 600 year: 2015 ident: 10.1074/jbc.REV120.013930_bib194 article-title: Emerging roles for RNA degradation in viral replication and antiviral defense publication-title: Virology doi: 10.1016/j.virol.2015.02.007 – volume: 81 start-page: 9812 year: 2007 ident: 10.1074/jbc.REV120.013930_bib234 article-title: Severe acute respiratory syndrome coronavirus ORF6 antagonizes STAT1 function by sequestering nuclear import factors on the rough endoplasmic reticulum/Golgi membrane publication-title: J. Virol doi: 10.1128/JVI.01012-07 – volume: 450–451 start-page: 64 year: 2014 ident: 10.1074/jbc.REV120.013930_bib64 article-title: MERS-CoV papain-like protease has deISGylating and deubiquitinating activities publication-title: Virology doi: 10.1016/j.virol.2013.11.040 – volume: 767 start-page: 17 year: 2013 ident: 10.1074/jbc.REV120.013930_bib110 article-title: Structure and mechanisms of SF1 DNA helicases publication-title: Adv. Exp. Med. Biol doi: 10.1007/978-1-4614-5037-5_2 – volume: 86 start-page: 13598 year: 2012 ident: 10.1074/jbc.REV120.013930_bib202 article-title: Severe acute respiratory syndrome coronavirus protein nsp1 is a novel eukaryotic translation inhibitor that represses multiple steps of translation initiation publication-title: J. Virol doi: 10.1128/JVI.01958-12 – volume: 40 start-page: 1737 year: 2012 ident: 10.1074/jbc.REV120.013930_bib98 article-title: The SARS-coronavirus nsp7+nsp8 complex is a unique multimeric RNA polymerase capable of both de novo initiation and primer extension publication-title: Nucleic Acids Res doi: 10.1093/nar/gkr893 – volume: 85 start-page: 12201 year: 2011 ident: 10.1074/jbc.REV120.013930_bib294 article-title: A double-inactivated severe acute respiratory syndrome coronavirus vaccine provides incomplete protection in mice and induces increased eosinophilic proinflammatory pulmonary response upon challenge publication-title: J. Virol doi: 10.1128/JVI.06048-11 – volume: 392 start-page: 135 year: 2005 ident: 10.1074/jbc.REV120.013930_bib264 article-title: Bcl-xL inhibits T-cell apoptosis induced by expression of SARS coronavirus E protein in the absence of growth factors publication-title: Biochem. J doi: 10.1042/BJ20050698 – volume: 181 start-page: 1036 year: 2020 ident: 10.1074/jbc.REV120.013930_bib222 article-title: Imbalanced host response to SARS-CoV-2 drives development of COVID-19 publication-title: Cell doi: 10.1016/j.cell.2020.04.026 – volume: 62 start-page: 4280 year: 1988 ident: 10.1074/jbc.REV120.013930_bib173 article-title: Interactions between coronavirus nucleocapsid protein and viral RNAs: implications for viral transcription publication-title: J. Virol doi: 10.1128/jvi.62.11.4280-4287.1988 – volume: 96 start-page: 59 year: 2016 ident: 10.1074/jbc.REV120.013930_bib298 article-title: The nonstructural proteins directing coronavirus RNA synthesis and processing publication-title: Adv. Virus. Res doi: 10.1016/bs.aivir.2016.08.008 – volume: 80 start-page: 785 year: 2006 ident: 10.1074/jbc.REV120.013930_bib205 article-title: 7a protein of severe acute respiratory syndrome coronavirus inhibits cellular protein synthesis and activates p38 mitogen-activated protein kinase publication-title: J. Virol doi: 10.1128/JVI.80.2.785-793.2006 – volume: 84 start-page: 7703 year: 2010 ident: 10.1074/jbc.REV120.013930_bib256 article-title: Upregulation of the chemokine (C-C motif) ligand 2 via a severe acute respiratory syndrome coronavirus spike-ACE2 signaling pathway publication-title: J. Virol doi: 10.1128/JVI.02560-09 – volume: 6 start-page: e19436 year: 2011 ident: 10.1074/jbc.REV120.013930_bib276 article-title: SARS-CoV 9b protein diffuses into nucleus, undergoes active Crm1 mediated nucleocytoplasmic export and triggers apoptosis when retained in the nucleus publication-title: PLoS ONE doi: 10.1371/journal.pone.0019436 – volume: 73 start-page: 6862 year: 1999 ident: 10.1074/jbc.REV120.013930_bib153 article-title: The putative helicase of the coronavirus mouse hepatitis virus is processed from the replicase gene polyprotein and localizes in complexes that are active in viral RNA synthesis publication-title: J. Virol doi: 10.1128/JVI.73.8.6862-6871.1999 – volume: 12 start-page: e1005473 year: 2016 ident: 10.1074/jbc.REV120.013930_bib51 article-title: High-resolution analysis of coronavirus gene expression by RNA sequencing and ribosome profiling publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1005473 – volume: 78 start-page: 12557 year: 2004 ident: 10.1074/jbc.REV120.013930_bib158 article-title: Generation of synthetic severe acute respiratory syndrome coronavirus pseudoparticles: implications for assembly and vaccine production publication-title: J. Virol doi: 10.1128/JVI.78.22.12557-12565.2004 – volume: 395 start-page: 1054 year: 2020 ident: 10.1074/jbc.REV120.013930_bib221 article-title: Clinical course and risk factors for mortality of adult inpatients with COVID-19 in Wuhan, China: a retrospective cohort study publication-title: Lancet doi: 10.1016/S0140-6736(20)30566-3 – volume: 81 start-page: 8722 year: 2007 ident: 10.1074/jbc.REV120.013930_bib26 article-title: Clathrin-dependent entry of severe acute respiratory syndrome coronavirus into target cells expressing ACE2 with the cytoplasmic tail deleted publication-title: J. Virol doi: 10.1128/JVI.00253-07 – volume: 4 start-page: e1000054 year: 2008 ident: 10.1074/jbc.REV120.013930_bib152 article-title: SARS-coronavirus replication/transcription complexes are membrane-protected and need a host factor for activity in vitro publication-title: PLoS Pathog doi: 10.1371/journal.ppat.1000054 – volume: 8 start-page: e70548 year: 2013 ident: 10.1074/jbc.REV120.013930_bib100 article-title: Regulation of coronaviral poly(A) tail length during infection publication-title: PLoS ONE doi: 10.1371/journal.pone.0070548 – volume: 205 start-page: 1601 year: 2008 ident: 10.1074/jbc.REV120.013930_bib227 article-title: Length-dependent recognition of double-stranded ribonucleic acids by retinoic acid–inducible gene-I and melanoma differentiation–associated gene 5 publication-title: J. Exp. Med doi: 10.1084/jem.20080091 – volume: 9 start-page: 904 year: 2018 ident: 10.1074/jbc.REV120.013930_bib258 article-title: SARS-coronavirus open reading frame-3a drives multimodal necrotic cell death publication-title: Cell Death Dis doi: 10.1038/s41419-018-0917-y – volume: 66 start-page: 3522 year: 1992 ident: 10.1074/jbc.REV120.013930_bib170 article-title: Identification and characterization of a coronavirus packaging signal publication-title: J. Virol doi: 10.1128/jvi.66.6.3522-3530.1992 – volume: 11 start-page: 1620 year: 2020 ident: 10.1074/jbc.REV120.013930_bib43 article-title: Characterization of spike glycoprotein of SARS-CoV-2 on virus entry and its immune cross-reactivity with SARS-CoV publication-title: Nat. Commun doi: 10.1038/s41467-020-15562-9 – volume: 103 start-page: 5108 year: 2006 ident: 10.1074/jbc.REV120.013930_bib112 article-title: Discovery of an RNA virus 3′→5′ exoribonuclease that is critically involved in coronavirus RNA synthesis publication-title: Proc. 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SubjectTerms | Animals Antigens, Viral - immunology cellular immune response coronavirus Coronavirus - genetics Coronavirus - immunology Coronavirus - physiology Coronavirus Infections - genetics Coronavirus Infections - immunology Coronavirus Infections - virology endoplasmic reticulum endoplasmic reticulum (ER) Gene Expression Regulation, Viral Host-Pathogen Interactions Humans innate immunity JBC Reviews pathogenesis plus-stranded RNA virus RNA polymerase SARS-CoV-2 viral replication virology virus virus entry Virus Physiological Phenomena |
Title | The molecular virology of coronaviruses |
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