The molecular virology of coronaviruses

Few human pathogens have been the focus of as much concentrated worldwide attention as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause of COVID-19. Its emergence into the human population and ensuing pandemic came on the heels of severe acute respiratory syndrome coronavirus...

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Published inThe Journal of biological chemistry Vol. 295; no. 37; pp. 12910 - 12934
Main Authors Hartenian, Ella, Nandakumar, Divya, Lari, Azra, Ly, Michael, Tucker, Jessica M., Glaunsinger, Britt A.
Format Journal Article
LanguageEnglish
Published United States Elsevier Inc 11.09.2020
American Society for Biochemistry and Molecular Biology
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Abstract Few human pathogens have been the focus of as much concentrated worldwide attention as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause of COVID-19. Its emergence into the human population and ensuing pandemic came on the heels of severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV), two other highly pathogenic coronavirus spillovers, which collectively have reshaped our view of a virus family previously associated primarily with the common cold. It has placed intense pressure on the collective scientific community to develop therapeutics and vaccines, whose engineering relies on a detailed understanding of coronavirus biology. Here, we present the molecular virology of coronavirus infection, including its entry into cells, its remarkably sophisticated gene expression and replication mechanisms, its extensive remodeling of the intracellular environment, and its multifaceted immune evasion strategies. We highlight aspects of the viral life cycle that may be amenable to antiviral targeting as well as key features of its biology that await discovery.
AbstractList Few human pathogens have been the focus of as much concentrated worldwide attention as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause of COVID-19. Its emergence into the human population and ensuing pandemic came on the heels of severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV), two other highly pathogenic coronavirus spillovers, which collectively have reshaped our view of a virus family previously associated primarily with the common cold. It has placed intense pressure on the collective scientific community to develop therapeutics and vaccines, whose engineering relies on a detailed understanding of coronavirus biology. Here, we present the molecular virology of coronavirus infection, including its entry into cells, its remarkably sophisticated gene expression and replication mechanisms, its extensive remodeling of the intracellular environment, and its multifaceted immune evasion strategies. We highlight aspects of the viral life cycle that may be amenable to antiviral targeting as well as key features of its biology that await discovery.
Few human pathogens have been the focus of as much concentrated worldwide attention as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause of COVID-19. Its emergence into the human population and ensuing pandemic came on the heels of severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV), two other highly pathogenic coronavirus spillovers, which collectively have reshaped our view of a virus family previously associated primarily with the common cold. It has placed intense pressure on the collective scientific community to develop therapeutics and vaccines, whose engineering relies on a detailed understanding of coronavirus biology. Here, we present the molecular virology of coronavirus infection, including its entry into cells, its remarkably sophisticated gene expression and replication mechanisms, its extensive remodeling of the intracellular environment, and its multifaceted immune evasion strategies. We highlight aspects of the viral life cycle that may be amenable to antiviral targeting as well as key features of its biology that await discovery.Few human pathogens have been the focus of as much concentrated worldwide attention as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause of COVID-19. Its emergence into the human population and ensuing pandemic came on the heels of severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV), two other highly pathogenic coronavirus spillovers, which collectively have reshaped our view of a virus family previously associated primarily with the common cold. It has placed intense pressure on the collective scientific community to develop therapeutics and vaccines, whose engineering relies on a detailed understanding of coronavirus biology. Here, we present the molecular virology of coronavirus infection, including its entry into cells, its remarkably sophisticated gene expression and replication mechanisms, its extensive remodeling of the intracellular environment, and its multifaceted immune evasion strategies. We highlight aspects of the viral life cycle that may be amenable to antiviral targeting as well as key features of its biology that await discovery.
Author Hartenian, Ella
Glaunsinger, Britt A.
Ly, Michael
Nandakumar, Divya
Tucker, Jessica M.
Lari, Azra
Author_xml – sequence: 1
  givenname: Ella
  orcidid: 0000-0001-9277-2152
  surname: Hartenian
  fullname: Hartenian, Ella
  organization: Department of Molecular and Cell Biology, University of California, Berkeley, California, USA
– sequence: 2
  givenname: Divya
  surname: Nandakumar
  fullname: Nandakumar, Divya
  organization: Department of Plant and Microbial Biology, University of California, Berkeley, California, USA
– sequence: 3
  givenname: Azra
  orcidid: 0000-0002-9649-8231
  surname: Lari
  fullname: Lari, Azra
  organization: Department of Plant and Microbial Biology, University of California, Berkeley, California, USA
– sequence: 4
  givenname: Michael
  surname: Ly
  fullname: Ly, Michael
  organization: Department of Molecular and Cell Biology, University of California, Berkeley, California, USA
– sequence: 5
  givenname: Jessica M.
  surname: Tucker
  fullname: Tucker, Jessica M.
  organization: Department of Plant and Microbial Biology, University of California, Berkeley, California, USA
– sequence: 6
  givenname: Britt A.
  surname: Glaunsinger
  fullname: Glaunsinger, Britt A.
  email: glaunsinger@berkeley.edu
  organization: Department of Molecular and Cell Biology, University of California, Berkeley, California, USA
BackLink https://www.ncbi.nlm.nih.gov/pubmed/32661197$$D View this record in MEDLINE/PubMed
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Cites_doi 10.1074/jbc.AC120.013056
10.1371/journal.ppat.1000863
10.3346/jkms.2020.35.e86
10.1128/JVI.00003-17
10.1073/pnas.2003138117
10.1038/nm1001
10.1016/j.chom.2014.09.009
10.1128/JVI.01542-10
10.1128/jvi.57.1.328-334.1986
10.1128/JVI.01266-07
10.1073/pnas.1706696114
10.1128/JVI.78.11.5913-5922.2004
10.1086/675991
10.1128/JVI.00127-20
10.1128/JVI.01467-06
10.1099/vir.0.81624-0
10.1016/j.antiviral.2017.12.010
10.1016/S1473-3099(20)30113-4
10.1016/j.virol.2014.04.027
10.1128/JVI.01505-08
10.1128/JVI.02231-06
10.1128/JVI.79.4.2079-2086.2005
10.1016/j.chom.2020.04.009
10.20506/rst.28.1.1856
10.1007/s00705-012-1404-x
10.1128/JVI.02576-13
10.1128/JVI.00626-13
10.1042/BJ20131461
10.1038/s41422-020-0282-0
10.1128/JVI.79.11.6620-6630.2005
10.1006/viro.2000.0611
10.1016/j.tim.2016.03.003
10.1128/JVI.01358-06
10.1074/jbc.M704870200
10.1128/mBio.00524-13
10.1128/JVI.02012-06
10.4049/jimmunol.0903490
10.1128/JVI.00725-07
10.1016/j.antiviral.2014.06.013
10.1016/j.virusres.2006.01.017
10.1146/annurev-virology-100114-055218
10.1371/journal.ppat.1004166
10.1128/JVI.79.4.2506-2516.2005
10.1016/S0140-6736(20)30183-5
10.1093/emboj/21.9.2076
10.1038/s41586-020-2286-9
10.1371/journal.pbio.0060226
10.1128/JVI.02203-08
10.1073/pnas.0307877101
10.1371/journal.ppat.1006474
10.1016/j.coviro.2019.04.002
10.1371/journal.pbio.3000715
10.1101/cshperspect.a011254
10.1016/j.virusres.2007.11.017
10.1086/423808
10.1038/s41591-020-0819-2
10.1099/vir.0.80671-0
10.1126/science.abb3405
10.1371/journal.pone.0036521
10.1126/science.abc2241
10.1038/cr.2008.15
10.1126/science.1085952
10.1128/jvi.56.3.912-920.1985
10.1002/j.1460-2075.1996.tb00553.x
10.1111/irv.12101
10.1371/journal.ppat.1002294
10.1086/423286
10.1038/ni.1979
10.1128/JVI.01348-19
10.1128/JVI.00367-09
10.1073/pnas.1921485117
10.1080/22221751.2020.1729069
10.1038/s41586-020-2012-7
10.3390/v11100972
10.1128/JVI.02480-09
10.1021/ja1098325
10.1128/JVI.01774-19
10.1016/j.celrep.2019.03.063
10.1016/j.virusres.2019.03.005
10.1016/j.cell.2020.02.058
10.1016/j.virol.2018.01.026
10.1074/jbc.RA120.013679
10.1128/JVI.79.23.14909-14922.2005
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10.1021/bi200303r
10.1371/journal.pone.0019655
10.1096/fj.06-6589com
10.1196/annals.1408.002
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10.1073/pnas.1407087111
10.1128/JVI.01890-13
10.4161/auto.29309
10.1128/mBio.00221-18
10.1073/pnas.1201130109
10.1016/j.antiviral.2017.02.007
10.1016/j.chom.2012.04.011
10.1128/JVI.00631-14
10.1016/j.virusres.2010.08.017
10.1002/path.1570
10.1016/j.ejmech.2017.10.064
10.1126/science.abb7498
10.1073/pnas.0603144103
10.1128/JVI.02776-14
10.1371/journal.pone.0165077
10.1182/blood-2004-10-4166
10.1016/j.jsb.2010.11.021
10.1038/ni1102-1013
10.1016/j.antiviral.2017.11.001
10.1128/JVI.05560-11
10.1371/journal.ppat.1004502
10.1073/pnas.1608147113
10.1038/s41467-019-10280-3
10.1016/j.chom.2020.02.001
10.1038/cr.2013.92
10.1038/s42003-018-0175-7
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10.1016/j.jmb.2006.06.021
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10.1006/viro.1997.8681
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10.1128/jvi.64.11.5367-5375.1990
10.1038/nsmb1123
10.1371/journal.ppat.1002059
10.1016/j.molcel.2020.04.022
10.1128/JVI.02406-07
10.1128/JVI.00893-18
10.1073/pnas.1323705111
10.1016/j.febslet.2006.05.051
10.1128/JVI.78.11.5619-5632.2004
10.1128/JVI.02472-07
10.1371/journal.ppat.1002433
10.1128/JVI.02501-05
10.1128/jvi.71.12.9278-9284.1997
10.1016/j.febslet.2005.10.065
10.1371/journal.ppat.1000896
10.1016/j.semarthrit.2010.10.002
10.1126/science.1092002
10.3201/eid1103.040906
10.1007/s10096-004-1271-9
10.1099/vir.0.033589-0
10.1016/j.virol.2011.03.029
10.1128/JVI.02371-08
10.1016/j.virol.2006.02.003
10.1128/mBio.01174-14
10.1126/science.1116480
10.1128/JVI.75.17.8173-8186.2001
10.1093/nar/gkp904
10.1038/s41577-020-0311-8
10.1128/JVI.02062-10
10.1093/nar/gkv838
10.1128/JVI.01199-08
10.1128/JVI.01772-09
10.1016/j.virol.2015.02.005
10.1016/j.virol.2009.02.021
10.1128/JVI.00090-07
10.1016/S0140-6736(03)13412-5
10.1016/j.antiviral.2020.104742
10.1128/JVI.02232-10
10.1016/j.virusres.2007.10.009
10.1128/JVI.02406-09
10.1128/JVI.01296-07
10.1128/JVI.01782-06
10.1111/j.1462-5822.2010.01437.x
10.1016/j.coi.2006.03.020
10.1073/pnas.0900971106
10.1111/febs.14863
10.1371/journal.ppat.1003565
10.1128/JVI.00373-19
10.1016/j.virol.2007.01.020
10.1056/NEJMc2001737
10.1016/j.cell.2020.02.052
10.1128/JVI.01794-07
10.1128/JVI.78.2.980-994.2004
10.1371/journal.ppat.1004320
10.1038/s41586-020-2008-3
10.1371/journal.pone.0076469
10.1128/JVI.00128-13
10.1128/JVI.01052-08
10.1016/j.virol.2015.01.019
10.1016/j.virol.2019.08.031
10.1038/nsmb.1680
10.1146/annurev-virology-031413-085507
10.1038/nature02145
10.1016/S0065-3527(08)60286-9
10.1007/978-1-4615-1325-4_71
10.1038/nm1726
10.1128/JVI.00042-11
10.1016/bs.aivir.2016.08.007
10.1126/science.1085658
10.1128/JVI.00078-11
10.1073/pnas.0808790106
10.1093/nar/18.7.1825
10.1007/978-1-4615-1325-4_13
10.1038/s41586-020-2180-5
10.1016/j.antiviral.2013.11.006
10.1016/j.str.2004.01.016
10.1093/nar/gkz409
10.3201/eid1002.030913
10.1083/jcb.131.2.339
10.1128/JVI.79.17.11335-11342.2005
10.1128/JVI.00702-07
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10.1006/viro.2002.1412
10.1038/s41422-020-0305-x
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10.1093/jac/dki346
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10.1093/infdis/jiv380
10.1128/JVI.79.13.8065-8078.2005
10.1128/mBio.00258-16
10.1016/j.antiviral.2012.07.007
10.1038/nm.2972
10.1128/JVI.77.5.2922-2927.2003
10.2741/3046
10.1016/j.virol.2004.09.033
10.1128/JVI.01331-15
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10.1128/AAC.00957-12
10.1038/nrmicro3469
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10.1016/S0140-6736(03)13973-6
10.1128/jvi.68.12.8131-8140.1994
10.1128/JVI.77.14.7890-7902.2003
10.1128/JVI.01253-09
10.1016/j.virusres.2014.11.021
10.1016/j.antiviral.2011.04.009
10.1016/j.jmb.2009.09.040
10.1111/j.1469-0691.2004.00956.x
10.1038/s41467-020-16256-y
10.1128/JVI.78.13.6723-6734.2004
10.1128/JVI.02011-09
10.1128/JVI.02050-13
10.1128/JVI.76.8.3697-3708.2002
10.1128/mBio.00319-19
10.1038/s41591-020-0820-9
10.1042/BJ20040984
10.1371/journal.ppat.1002315
10.1128/JVI.01700-12
10.3390/diseases4030026
10.1016/S0042-6822(03)00117-X
10.7554/eLife.42037
10.1371/journal.ppat.1003760
10.1128/jvi.64.12.6045-6053.1990
10.1074/jbc.M109.008227
10.2353/ajpath.2007.061088
10.1093/infdis/jiv381
10.1128/JVI.01782-12
10.1371/journal.pone.0003299
10.1006/viro.1996.0165
10.1016/j.antiviral.2020.104811
10.1128/JVI.01352-15
10.1016/j.virusres.2006.06.005
10.1371/journal.pone.0000459
10.1073/pnas.0505577102
10.1128/JVI.78.8.3863-3871.2004
10.1126/science.1085953
10.1128/JVI.02146-06
10.1002/path.4454
10.1371/journal.ppat.0030109
10.1016/j.chom.2017.08.006
10.1016/j.virusres.2014.12.001
10.1038/sj.emboj.7601368
10.1099/vir.0.038414-0
10.1128/JVI.00440-09
10.1517/14728222.2012.665879
10.1128/JVI.80.6.2684-2693.2006
10.1128/jvi.41.2.557-565.1982
10.1073/pnas.1618310114
10.1128/JVI.02622-07
10.1016/j.antiviral.2014.12.015
10.1001/jama.2020.0757
10.1126/science.abb2507
10.1074/jbc.M407233200
10.1128/JVI.00100-13
10.1016/S0046-8177(03)00367-8
10.1016/j.virusres.2009.01.005
10.1007/s11373-005-9035-9
10.1128/JVI.78.11.6048-6054.2004
10.1128/JVI.74.17.8127-8134.2000
10.1073/pnas.0701000104
10.1128/mBio.01503-17
10.1074/jbc.M116.716100
10.1128/JVI.00110-15
10.1099/0022-1317-81-4-853
10.1016/j.virol.2015.02.007
10.1128/JVI.01012-07
10.1016/j.virol.2013.11.040
10.1007/978-1-4614-5037-5_2
10.1128/JVI.01958-12
10.1093/nar/gkr893
10.1128/JVI.06048-11
10.1042/BJ20050698
10.1016/j.cell.2020.04.026
10.1128/jvi.62.11.4280-4287.1988
10.1016/bs.aivir.2016.08.008
10.1128/JVI.80.2.785-793.2006
10.1128/JVI.02560-09
10.1371/journal.pone.0019436
10.1128/JVI.73.8.6862-6871.1999
10.1371/journal.ppat.1005473
10.1128/JVI.78.22.12557-12565.2004
10.1016/S0140-6736(20)30566-3
10.1128/JVI.00253-07
10.1371/journal.ppat.1000054
10.1371/journal.pone.0070548
10.1084/jem.20080091
10.1038/s41419-018-0917-y
10.1128/jvi.66.6.3522-3530.1992
10.1038/s41467-020-15562-9
10.1073/pnas.0508200103
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Issue 37
Keywords cellular immune response
coronavirus
RNA polymerase
virus
viral replication
pathogenesis
SARS-CoV-2
innate immunity
virology
plus-stranded RNA virus
virus entry
endoplasmic reticulum (ER)
endoplasmic reticulum
Language English
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2020 Hartenian et al.
Published under exclusive license by The American Society for Biochemistry and Molecular Biology, Inc.
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Edited by Craig E. Cameron
These authors contributed equally to this work.
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References Zhou, Li, Wang, Wang, Shi (bib231) 2012; 93
Wu, Wang, Shen, Peng, Li, Zhao, Li, Li, Bi, Yang, Gong, Xiao, Fan, Tan, Wu (bib45) 2020; 368
Kim, Ko, Kim, Kim, Kim, Chung, Kim, Han, Kim, Chin (bib282) 2020; 35
Ying, Li, Dimitrov (bib265) 2016; 213
Siu, Kok, Ng, Poon, Yuen, Zheng, Jin (bib233) 2009; 284
Amara, Mercer (bib261) 2015; 13
Liu, Fung, Chong, Shukla, Hilgenfeld (bib186) 2014; 109
Ou, Liu, Lei, Li, Mi, Ren, Guo, Guo, Chen, Hu, Xiang, Mu, Chen, Chen, Hu (bib43) 2020; 11
Shi, Su, Li, Liang, Dong, Huang (bib320) 2019; 265
Tay, Poh, Rénia, MacAry, Ng (bib44) 2020; 20
Lontok, Corse, Machamer (bib165) 2004; 78
Zhang, Li, Yan, Ming, Jia, Lou, Rao (bib318) 2018; 92
Brian, Baric (bib50) 2005; 287
Miknis, Donaldson, Umland, Rimmer, Baric, Schultz (bib103) 2009; 83
Gosert, Kanjanahaluethai, Egger, Bienz, Baker (bib147) 2002; 76
Lokugamage, Narayanan, Nakagawa, Terasaki, Ramirez, Tseng, Makino (bib203) 2015; 89
Cabeça, Granato, Bellei (bib211) 2013; 7
Cheng, Mir (bib127) 2012; 86
Smith, Case, Blanc, Isakov, Shomron, Vignuzzi, Denison (bib117) 2015; 89
Lundin, Dijkman, Bergström, Kann, Adamiak, Hannoun, Kindler, Jónsdóttir, Muth, Kint, Forlenza, Müller, Drosten, Thiel, Trybala (bib151) 2014; 10
Wang, Cao, Zhang, Yang, Liu, Xu, Shi, Hu, Zhong, Xiao (bib30) 2020; 30
DeDiego, Nieto-Torres, Jiménez-Guardeño, Regla-Nava, Álvarez, Oliveros, Zhao, Fett, Perlman, Enjuanes (bib269) 2011; 7
Abernathy, Glaunsinger (bib194) 2015; 479–480
Chen, Ping, Lee, Chen, Lee, Chan, Lien, Jap, Lin, Kao, Chen (bib275) 2007; 196
Inoue, Tanaka, Tanaka, Inoue, Morita, Zhuang, Hattori, Sugamura (bib26) 2007; 81
Frana, Behnke, Sturman, Holmes (bib14) 1985; 56
Lan, Ge, Yu, Shan, Zhou, Fan, Zhang, Shi, Wang, Zhang, Wang (bib34) 2020; 581
Fink, Cookson (bib257) 2005; 73
Follis, York, Nunberg (bib39) 2006; 350
Zhang, Lin, Sun, Curth, Drosten, Sauerhering, Becker, Rox, Hilgenfeld (bib60) 2020; 368
Schwegmann-Wessels, Al-Falah, Escors, Wang, Zimmer, Deng, Enjuanes, Naim, Herrler (bib166) 2004; 279
Velthuis, Te, Arnold, Cameron, van den Worm, Snijder (bib94) 2010; 38
Chen, Cai, Pan, Xiang, Tien, Ahola, Guo (bib129) 2009; 106
Kumar, Shin, Shie, Ku, Kim, Go, Huang, Kim, Liang (bib61) 2017; 141
Makino, Yokomori, Lai (bib168) 1990; 64
(bib192) 2004; 303
Venkatagopalan, Daskalova, Lopez, Dolezal, Hogue (bib164) 2015; 478
Beachboard, Anderson-Daniels, Denison (bib312) 2015; 89
Lin, Liao, Lai (bib133) 1994; 68
Cannalire, Tarantino, Astolfi, Barreca, Sabatini, Massari, Tabarrini, Milani, Querat, Mastrangelo, Manfroni, Cecchetti (bib143) 2018; 143
Cinatl, Morgenstern, Bauer, Chandra, Rabenau, Doerr (bib223) 2003; 362
Goldman, Sammani, Kempf, Saadat, Letsiou, Wang, Moreno-Vinasco, Rizzo, Fortman, Garcia (bib247) 2014; 4
Snijder, Decroly, Ziebuhr (bib298) 2016; 96
Nieto-Torres, DeDiego, Álvarez, Jiménez-Guardeño, Regla-Nava, Llorente, Kremer, Shuo, Enjuanes (bib301) 2011; 415
Wang, Sawicki (bib71) 2001; 494
Escors, Izeta, Capiscol, Enjuanes (bib169) 2003; 77
Ontiveros, Kuo, Masters, Perlman (bib179) 2001; 494
Spiegel, Pichlmair, Martínez-Sobrido, Cros, García-Sastre, Haller, Weber (bib214) 2005; 79
Millet, Whittaker (bib13) 2014; 111
Huang, Lokugamage, Rozovics, Narayanan, Semler, Makino (bib81) 2011; 7
Müller, Schulte, Lange-Grünweller, Obermann, Madhugiri, Pleschka, Ziebuhr, Hartmann, Grünweller (bib135) 2018; 150
Plant, Rakauskaite, Taylor, Dinman (bib54) 2010; 84
Rota, Oberste, Monroe, Nix, Campagnoli, Icenogle, Peñaranda, Bankamp, Maher, Chen, Tong, Tamin, Lowe, Frace, DeRisi (bib184) 2003; 300
Kanzawa, Nishigaki, Hayashi, Ishii, Furukawa, Niiro, Yasui, Kohara, Morita, Matsushima, Le, Masuda, Kannagi (bib250) 2006; 580
Hagemeijer, Ulasli, Vonk, Reggiori, Rottier, de Haan (bib68) 2011; 85
Bouvet, Imbert, Subissi, Gluais, Canard, Decroly (bib116) 2012; 109
Neuman, Kiss, Kunding, Bhella, Baksh, Connelly, Droese, Klaus, Makino, Sawicki, Siddell, Stamou, Wilson, Kuhn, Buchmeier (bib304) 2011; 174
Nicholls, Poon, Lee, Ng, Lai, Leung, Chu, Hui, Mak, Lim, Yan, Chan, Tsang, Guan, Yuen (bib218) 2003; 361
Lai, Cavanagh (bib185) 1997; 48
Zhou, Yu, Du, Fan, Liu, Liu, Xiang, Wang, Song, Gu, Guan, Wei, Li, Wu, Xu (bib221) 2020; 395
Gadlage, Sparks, Beachboard, Cox, Doyle, Stobart, Denison (bib311) 2010; 84
He, Zhang, Xu, Yang, Yang, Feng, Xia, Zhou, Zhen, Feng, Guo, Zhang, Tu (bib2) 2014; 88
Lo, Tsai, Lin, Lin, Wu (bib74) 2019; 286
Gralinski, Baric (bib212) 2015; 235
Ireland, Stohlman, Hinton, Atkinson, Bergmann (bib215) 2008; 82
Funk, Wang, Ito, Travanty, Voelker, Holmes, Mason (bib216) 2012; 93
Sawicki, Sawicki, Siddell (bib79) 2007; 81
Gordon, Tchesnokov, Woolner, Perry, Feng, Porter, Gotte (bib142) 2020; 295
Zhu, Chakraborti, He, Roberts, Sheahan, Xiao, Hensley, Prabakaran, Rockx, Sidorov, Corti, Vogel, Feng, Kim, Wang (bib285) 2007; 104
Kuo, Masters (bib303) 2003; 77
Gaucherand, Porter, Levene, Price, Schmaling, Rycroft, Kevorkian, McCormick, Khaperskyy, Gaglia (bib200) 2019; 27
Yue, Nabar, Shi, Kamenyeva, Xiao, Hwang, Wang, Kehrl (bib258) 2018; 9
Zhou, Yang, Wang, Hu, Zhang, Zhang, Si, Zhu, Li, Huang, Chen, Chen, Luo, Guo, Jiang (bib7) 2020; 579
Schaecher, Touchette, Schriewer, Buller, Pekosz (bib274) 2007; 81
Hussain, Gallagher (bib322) 2010; 153
Benedict, Norris, Ware (bib260) 2002; 3
Smith, Denison (bib111) 2013; 9
Tsoi, Li, Chen, Lau, Tsui, Chan (bib268) 2014; 464
Kalia, Sarkar, Gourley, Rouse, Ahmed (bib293) 2006; 18
Plant, Dinman (bib55) 2008; 13
Shulla, Heald-Sargent, Subramanya, Zhao, Perlman, Gallagher (bib12) 2011; 85
Vennema, Godeke, Rossen, Voorhout, Horzinek, Opstelten, Rottier (bib157) 1996; 15
Narayanan, Huang, Makino (bib187) 2008; 133
Lokugamage, Hage, Schindewolf, Rajsbaum, Menachery (bib190) 2020
Eckerle, Lu, Sperry, Choi, Denison (bib113) 2007; 81
Züst, Cervantes-Barragan, Habjan, Maier, Neuman, Ziebuhr, Szretter, Baker, Barchet, Diamond, Siddell, Ludewig, Thiel (bib132) 2011; 12
Narayanan, Chen, Maeda, Makino (bib175) 2003; 77
Bhardwaj, Sun, Holzenburg, Guarino, Kao (bib316) 2006; 361
Li, Li, Farzan, Harrison (bib286) 2005; 309
Gordon, Jang, Bouhaddou, Xu, Obernier, White, O'Meara, Rezelj, Guo, Swaney, Tummino, Hüttenhain, Kaake, Richards, Tutuncuoglu (bib137) 2020; 583
Andersen, Rambaut, Lipkin, Holmes, Garry (bib31) 2020; 26
Corey, Mascola, Fauci, Collins (bib47) 2020; 368
Hao, Wojdyla, Zhao, Han, Das, Zlatev, Manoharan, Wang, Cui (bib109) 2017; 13
Blanco-Melo, Nilsson-Payant, Liu, Uhl, Hoagland, Møller, Jordan, Oishi, Panis, Sachs, Wang, Schwartz, Lim, Albrecht, tenOever (bib222) 2020; 181
Tan, Teng, Shen, Tan, Goh, Fielding, Ooi, Tan, Lim, Hong (bib272) 2004; 78
Simmons, Gosalia, Rennekamp, Reeves, Diamond, Bates (bib24) 2005; 102
Adedeji, Singh, Calcaterra, DeDiego, Enjuanes, Weiss, Sarafianos (bib145) 2012; 56
Wu, Chen, Yeh (bib86) 2014; 16
Wang, Yang, Liu, Guo, Zhang, Zhang, Jiang (bib25) 2008; 18
Yang, Xiong, Zhang, Yan, Nguyen, Ng, Lu, Brendese, Yang, Wang, Yang (bib264) 2005; 392
Yount, Roberts, Sims, Deming, Frieman, Sparks, Denison, Davis, Baric (bib178) 2005; 79
Qian, Dominguez, Holmes (bib16) 2013; 8
Gribble, Pruijssers, Agostini, Anderson-Daniels, Chappell, Lu, Stevens, Routh, Denison (bib125) 2020
Kopecky-Bromberg, Martínez-Sobrido, Palese (bib205) 2006; 80
Khan, Fielding, Tan, Chou, Shen, Lim, Hong, Tan (bib259) 2006; 122
Zúñiga, Sola, Alonso, Enjuanes (bib78) 2004; 78
Li (bib4) 2016; 3
Cencic, Desforges, Hall, Kozakov, Du, Min, Dingledine, Fu, Vajda, Talbot, Pelletier (bib136) 2011; 85
Nguyen, Hogue (bib161) 1997; 71
Züst, Cervantes-Barragán, Kuri, Blakqori, Weber, Ludewig, Thiel (bib235) 2007; 3
Freundt, Yu, Park, Lenardo, Xu (bib321) 2009; 83
Wang, Shi, Jiang, Zhang, Wang, Tong, Guo, Fu, Cui, Liu, Arledge, Chen, Zhang, Wang (bib17) 2013; 23
Vignuzzi, Wendt, Andino (bib120) 2008; 14
Hussain, Perlman, Gallagher (bib324) 2008; 82
Clementz, Chen, Banach, Wang, Sun, Ratia, Baez-Santos, Wang, Takayama, Ghosh, Li, Mesecar, Baker (bib63) 2010; 84
Hyde, Diamond (bib126) 2015; 479–480
Kamitani, Narayanan, Huang, Lokugamage, Ikegami, Ito, Kubo, Makino (bib195) 2006; 103
Paules, Marston, Jama (bib1) 2020
Huang, Wang, Li, Ren, Zhao, Hu, Zhang, Fan, Xu, Gu, Cheng, Yu, Xia, Wei, Wu (bib220) 2020; 395
Masters (bib172) 2019; 537
Narayanan, Huang, Lokugamage, Kamitani, Ikegami, Tseng, Makino (bib196) 2008; 82
Opstelten, Raamsman, Wolfs, Horzinek, Rottier (bib162) 1995; 131
Schmidt, Schwerd, Hamm, Hellmuth, Cui, Wenzel, Hoffmann, Michallet, Besch, Hopfner, Endres, Rothenfusser (bib226) 2009; 106
de Haan, Masters, Shen, Weiss, Rottier (bib176) 2002; 296
Satija, Lal (bib191) 2007; 1102
Denison, Spaan, van der Meer, Gibson, Sims, Prentice, Lu (bib153) 1999; 73
DeDiego, Álvarez, Almazán, Rejas, Lamirande, Roberts, Shieh, Zaki, Subbarao, Enjuanes (bib302) 2007; 81
Siu, Teoh, Lo, Chan, Kien, Escriou, Tsao, Nicholls, Altmeyer, Peiris, Bruzzone, Nal (bib3) 2008; 82
Ahn, Choi, Taylor, Oh (bib95) 2012; 157
Raney, Byrd, Aarattuthodiyil (bib110) 2013; 767
Thevarajan, Nguyen, Koutsakos, Druce, Caly, van de Sandt, Jia, Nicholson, Catton, Cowie, Tong, Lewin, Kedzierska (bib278) 2020; 26
Bos, Luytjes, van der Meulen, Koerten, Spaan (bib156) 1996; 218
Velthuis, Te, van den Worm, Snijder (bib98) 2012; 40
Franks, Chong, Chui, Galvin, Lourens, Reid, Selbs, Mcevoy, Hayden, Fukuoka, Taubenberger, Travis (bib217) 2003; 34
Chen, van den Born, van den Worm, Pleij, Snijder, Olsthoorn (bib171) 2007; 81
Marceau (bib104) 2012; 922
Shen, Wen, Liu (bib180) 2003; 311
Liu, Yang, Gu, Yue, Wu, Wu, Zhu (bib248) 2007; 21
Glowacka, Bertram, Müller, Allen, Soilleux, Pfefferle, Steffen, Tsegaye, He, Gnirss, Niemeyer, Schneider, Drosten, Pöhlmann (bib10) 2011; 85
Zhou, Pan, Zhang, Li, Zhang, Bai, Huang, Peng, Zhang, Liu, Tao, Zhang (bib27) 2016; 291
van Hemert, van den Worm, Knoops, Mommaas, Gorbalenya, Snijder (bib152) 2008; 4
Haagmans, Kuiken, Martina, Fouchier, Rimmelzwaan, van Amerongen, van Riel, de Jong, Itamura, Chan, Tashiro, Osterhaus (bib224) 2004; 10
Imbert, Guillemot, Bourhis, Bussetta, Coutard, Egloff, Ferron, Gorbalenya, Canard (bib97) 2006; 25
Sawicki, Sawicki (bib70) 2005; 287
Bouvet, Debarnot, Imbert, Selisko, Snijder, Canard, Decroly (bib130) 2010; 6
Fosmire, Hwang, Makino (bib170) 1992; 66
Peng, Lin, Lin, Lo, Ts
Kuo (10.1074/jbc.REV120.013930_bib159) 2013; 87
Park (10.1074/jbc.REV120.013930_bib28) 2016; 113
Makino (10.1074/jbc.REV120.013930_bib168) 1990; 64
Zhang (10.1074/jbc.REV120.013930_bib318) 2018; 92
Alexander (10.1074/jbc.REV120.013930_bib41) 2009; 28
Funk (10.1074/jbc.REV120.013930_bib216) 2012; 93
Zúñiga (10.1074/jbc.REV120.013930_bib88) 2010; 84
Channappanavar (10.1074/jbc.REV120.013930_bib209) 2016; 19
Nicholls (10.1074/jbc.REV120.013930_bib218) 2003; 361
Minskaia (10.1074/jbc.REV120.013930_bib112) 2006; 103
Kamitani (10.1074/jbc.REV120.013930_bib204) 2009; 16
Egloff (10.1074/jbc.REV120.013930_bib101) 2004; 101
Dosch (10.1074/jbc.REV120.013930_bib251) 2009; 142
Wang (10.1074/jbc.REV120.013930_bib71) 2001; 494
Graham (10.1074/jbc.REV120.013930_bib124) 2018; 1
Deng (10.1074/jbc.REV120.013930_bib317) 2017; 114
Knoops (10.1074/jbc.REV120.013930_bib66) 2008; 6
Li (10.1074/jbc.REV120.013930_bib286) 2005; 309
Hagemeijer (10.1074/jbc.REV120.013930_bib68) 2011; 85
Raney (10.1074/jbc.REV120.013930_bib110) 2013; 767
Paules (10.1074/jbc.REV120.013930_bib1) 2020
Rota (10.1074/jbc.REV120.013930_bib184) 2003; 300
Zhao (10.1074/jbc.REV120.013930_bib323) 2009; 83
Müller (10.1074/jbc.REV120.013930_bib135) 2018; 150
McBride (10.1074/jbc.REV120.013930_bib167) 2007; 81
Amara (10.1074/jbc.REV120.013930_bib261) 2015; 13
Zou (10.1074/jbc.REV120.013930_bib283) 2020; 382
Zhou (10.1074/jbc.REV120.013930_bib221) 2020; 395
Blau (10.1074/jbc.REV120.013930_bib20) 2001; 75
Sawicki (10.1074/jbc.REV120.013930_bib89) 1986; 57
Ying (10.1074/jbc.REV120.013930_bib265) 2016; 213
Pan (10.1074/jbc.REV120.013930_bib296) 2008; 3
Masters (10.1074/jbc.REV120.013930_bib172) 2019; 537
Ivanov (10.1074/jbc.REV120.013930_bib108) 2004; 78
Cheng (10.1074/jbc.REV120.013930_bib38) 2019; 11
Miknis (10.1074/jbc.REV120.013930_bib103) 2009; 83
Snijder (10.1074/jbc.REV120.013930_bib155) 2020; 18
Sawicki (10.1074/jbc.REV120.013930_bib70) 2005; 287
Varshney (10.1074/jbc.REV120.013930_bib249) 2011; 50
DeDiego (10.1074/jbc.REV120.013930_bib269) 2011; 7
Mateos-Gómez (10.1074/jbc.REV120.013930_bib84) 2013; 87
Nal (10.1074/jbc.REV120.013930_bib305) 2005; 86
Di (10.1074/jbc.REV120.013930_bib82) 2017; 114
Graham (10.1074/jbc.REV120.013930_bib118) 2012; 18
Hurst (10.1074/jbc.REV120.013930_bib308) 2009; 83
Tian (10.1074/jbc.REV120.013930_bib287) 2020; 9
Bolles (10.1074/jbc.REV120.013930_bib294) 2011; 85
Brunn, von (10.1074/jbc.REV120.013930_bib295) 2007; 2
Shirato (10.1074/jbc.REV120.013930_bib19) 2013; 87
Haijema (10.1074/jbc.REV120.013930_bib177) 2004; 78
Park (10.1074/jbc.REV120.013930_bib56) 2011; 133
Lei (10.1074/jbc.REV120.013930_bib309) 2018; 149
Mielech (10.1074/jbc.REV120.013930_bib64) 2014; 450–451
Menachery (10.1074/jbc.REV120.013930_bib210) 2014; 5
Tang (10.1074/jbc.REV120.013930_bib292) 2011; 186
Baric (10.1074/jbc.REV120.013930_bib173) 1988; 62
Millet (10.1074/jbc.REV120.013930_bib13) 2014; 111
Franks (10.1074/jbc.REV120.013930_bib217) 2003; 34
Gordon (10.1074/jbc.REV120.013930_bib141) 2020; 295
Xiao (10.1074/jbc.REV120.013930_bib121) 2017; 22
DeDiego (10.1074/jbc.REV120.013930_bib302) 2007; 81
Plant (10.1074/jbc.REV120.013930_bib53) 2013; 5
Smith (10.1074/jbc.REV120.013930_bib117) 2015; 89
Opstelten (10.1074/jbc.REV120.013930_bib162) 1995; 131
Hussain (10.1074/jbc.REV120.013930_bib322) 2010; 153
Bouvet (10.1074/jbc.REV120.013930_bib116) 2012; 109
He (10.1074/jbc.REV120.013930_bib2) 2014; 88
Tan (10.1074/jbc.REV120.013930_bib21) 2002; 21
Gordon (10.1074/jbc.REV120.013930_bib142) 2020; 295
Chen (10.1074/jbc.REV120.013930_bib319) 2011; 7
Wathelet (10.1074/jbc.REV120.013930_bib201) 2007; 81
Cheng (10.1074/jbc.REV120.013930_bib289) 2005; 24
Narayanan (10.1074/jbc.REV120.013930_bib175) 2003; 77
Follis (10.1074/jbc.REV120.013930_bib39) 2006; 350
Nguyen (10.1074/jbc.REV120.013930_bib161) 1997; 71
Adedeji (10.1074/jbc.REV120.013930_bib105) 2012; 7
Morrison (10.1074/jbc.REV120.013930_bib243) 2012; 4
Abernathy (10.1074/jbc.REV120.013930_bib194) 2015; 479–480
Hagemeijer (10.1074/jbc.REV120.013930_bib69) 2014; 458-459
Smith (10.1074/jbc.REV120.013930_bib115) 2013; 9
Huang (10.1074/jbc.REV120.013930_bib220) 2020; 395
Kopecky-Bromberg (10.1074/jbc.REV120.013930_bib205) 2006; 80
Surjit (10.1074/jbc.REV120.013930_bib254) 2004; 383
Lundin (10.1074/jbc.REV120.013930_bib151) 2014; 10
Lai (10.1074/jbc.REV120.013930_bib75) 1982; 41
Ulasli (10.1074/jbc.REV120.013930_bib150) 2010; 12
Lontok (10.1074/jbc.REV120.013930_bib165) 2004; 78
Fosmire (10.1074/jbc.REV120.013930_bib170) 1992; 66
Imbert (10.1074/jbc.REV120.013930_bib297) 2008; 133
Inoue (10.1074/jbc.REV120.013930_bib26) 2007; 81
Wu (10.1074/jbc.REV120.013930_bib100) 2013; 8
Ludwicka-Bradley (10.1074/jbc.REV120.013930_bib219) 2011; 41
Chu (10.1074/jbc.REV120.013930_bib266) 2016; 213
de Haan (10.1074/jbc.REV120.013930_bib176) 2002; 296
Narayanan (10.1074/jbc.REV120.013930_bib196) 2008; 82
Agostini (10.1074/jbc.REV120.013930_bib140) 2018; 9
Agostini (10.1074/jbc.REV120.013930_bib144) 2019; 93
Schwegmann-Wessels (10.1074/jbc.REV120.013930_bib166) 2004; 279
Moreno (10.1074/jbc.REV120.013930_bib83) 2008; 82
Züst (10.1074/jbc.REV120.013930_bib235) 2007; 3
Tsoi (10.1074/jbc.REV120.013930_bib268) 2014; 464
Tanaka (10.1074/jbc.REV120.013930_bib197) 2012; 86
Gu (10.1074/jbc.REV120.013930_bib262) 2007; 170
Li (10.1074/jbc.REV120.013930_bib8) 2003; 426
Zhou (10.1074/jbc.REV120.013930_bib27) 2016; 291
Subissi (10.1074/jbc.REV120.013930_bib91) 2014; 111
Gralinski (10.1074/jbc.REV120.013930_bib212) 2015; 235
Serrano (10.1074/jbc.REV120.013930_bib310) 2009; 83
Gaucherand (10.1074/jbc.REV120.013930_bib200) 2019; 27
Kopecky-Bromberg (10.1074/jbc.REV120.013930_bib232) 2007; 81
Stobart (10.1074/jbc.REV120.013930_bib313) 2013; 87
Law (10.1074/jbc.REV120.013930_bib326) 2006; 580
Jiménez-Guardeño (10.1074/jbc.REV120.013930_bib253) 2014; 10
Mantlo (10.1074/jbc.REV120.013930_bib225) 2020; 179
Neuman (10.1074/jbc.REV120.013930_bib304) 2011; 174
McCray (10.1074/jbc.REV120.013930_bib213) 2007; 81
Irigoyen (10.1074/jbc.REV120.013930_bib51) 2016; 12
Smith (10.1074/jbc.REV120.013930_bib90) 2014; 1
Goldman (10.1074/jbc.REV120.013930_bib247) 2014; 4
Wang (10.1074/jbc.REV120.013930_bib288) 2020; 11
Escors (10.1074/jbc.REV120.013930_bib169) 2003; 77
Vignuzzi (10.1074/jbc.REV120.013930_bib120) 2008; 14
Haagmans (10.1074/jbc.REV120.013930_bib224) 2004; 10
Yeh (10.1074/jbc.REV120.013930_bib291) 2005; 56
Plant (10.1074/jbc.REV120.013930_bib55) 2008; 13
Tan (10.1074/jbc.REV120.013930_bib272) 2004; 78
Marceau (10.1074/jbc.REV120.013930_bib104) 2012; 922
Schmidt (10.1074/jbc.REV120.013930_bib226) 2009; 106
Lan (10.1074/jbc.REV120.013930_bib34) 2020; 581
Collins (10.1074/jbc.REV120.013930_bib263) 2002; 9
Gordon (10.1074/jbc.REV120.013930_bib137) 2020; 583
Sung (10.1074/jbc.REV120.013930_bib325) 2009; 387
Matsuyama (10.1074/jbc.REV120.013930_bib11) 2010; 84
Blanco-Melo (10.1074/jbc.REV120.013930_bib222) 2020; 181
Sola (10.1074/jbc.REV120.013930_bib76) 2015; 2
Wu (10.1074/jbc.REV120.013930_bib188) 2020; 579
Adedeji (10.1074/jbc.REV120.013930_bib145) 2012; 56
Gao (10.1074/jbc.REV120.013930_bib93) 2020; 368
Venkatagopalan (10.1074/jbc.REV120.013930_bib164) 2015; 478
Wu (10.1074/jbc.REV120.013930_bib45) 2020; 368
Xia (10.1074/jbc.REV120.013930_bib46) 2020; 30
Decroly (10.1074/jbc.REV120.013930_bib131) 2011; 7
Lokugamage (10.1074/jbc.REV120.013930_bib190) 2020
Sharma (10.1074/jbc.REV120.013930_bib276) 2011; 6
Shang (10.1074/jbc.REV120.013930_bib29) 2020; 117
Su (10.1074/jbc.REV120.013930_bib122) 2016; 24
Roth-Cross (10.1074/jbc.REV120.013930_bib238) 2009; 83
Shi (10.1074/jbc.REV120.013930_bib320) 2019; 265
Padhan (10.1074/jbc.REV120.013930_bib271) 2008; 89
Nieto-Torres (10.1074/jbc.REV120.013930_bib301) 2011; 415
Su (10.1074/jbc.REV120.013930_bib193) 2020; 11
Temperton (10.1074/jbc.REV120.013930_bib280) 2005; 11
Subissi (10.1074/jbc.REV120.013930_bib138) 2014; 101
Lehmann (10.1074/jbc.REV120.013930_bib107) 2015; 202
van Hemert (10.1074/jbc.REV120.013930_bib152) 2008; 4
Law (10.1074/jbc.REV120.013930_bib206) 2005; 106
Hyde (10.1074/jbc.REV120.013930_bib126) 2015; 479–480
Cencic (10.1074/jbc.REV120.013930_bib136) 2011; 85
Tan (10.1074/jbc.REV120.013930_bib273) 2007; 81
Siu (10.1074/jbc.REV120.013930_bib3) 2008; 82
Yang (10.1074/jbc.REV120.013930_bib264) 2005; 392
Wrapp (10.1074/jbc.REV120.013930_bib33) 2020; 367
Narayanan (10.1074/jbc.REV120.013930_bib187) 2008; 133
Roth-Cross (10.1074/jbc.REV120.013930_bib228) 2008; 82
Soo (10.1074/jbc.REV120.013930_bib290) 2004; 10
Chang (10.1074/jbc.REV120.013930_bib306) 2006; 13
Khan (10.1074/jbc.REV120.013930_bib259) 2006; 122
Plant (10.1074/jbc.REV120.013930_bib54) 2010; 84
Eckerle (10.1074/jbc.REV120.013930_bib113) 2007; 81
Benedict (10.1074/jbc.REV120.013930_bib260) 2002; 3
Báez-Santos (10.1074/jbc.REV120.013930_bib65) 2015; 115
de Haan (10.1074/jbc.REV120.013930_bib15) 2004; 78
Hao (10.1074/jbc.REV120.013930_bib109) 2017; 13
Hussain (10.1074/jbc.REV120.013930_bib324) 2008; 82
Hoffmann (10.1074/jbc.REV120.013930_bib6) 2020; 181
Smith (10.1074/jbc.REV120.013930_bib111) 2013; 9
Chen (10.1074/jbc.REV120.013930_bib171) 2007; 81
Angelini (10.1074/jbc.REV120.013930_bib67) 2013; 4
Ireland (10.1074/jbc.REV120.013930_bib215) 2008; 82
Zhao (10.1074/jbc.REV120.013930_bib239) 2012; 11
Di (10.1074/jbc.REV120.013930_bib80) 2018; 517
Tay (10.1074/jbc.REV120.013930_bib44) 2020; 20
Kim (10.1074/jbc.REV120.013930_bib48) 2020; 38
Wu (10.1074/jbc.REV120.013930_bib86) 2014; 16
Pewe (10.1074/jbc.REV120.013930_bib236) 2005; 79
Ferron (10.1074/jbc.REV120.013930_bib146) 2012; 96
Grossoehme (10.1074/jbc.REV120.013930_bib87) 2009; 394
Marra (10.1074/jbc.REV120.013930_bib183) 2003; 300
Zhu (10.1074/jbc.REV120.013930_bib314) 2017; 91
Cannalire (10.1074/jbc.REV120.013930_bib143) 2018; 143
Frana (10.1074/jbc.REV120.013930_bib14) 1985; 56
Siu (10.1074/jbc.REV120.013930_bib233) 2009; 284
Qian (10.1074/jbc.REV120.013930_bib16) 2013; 8
Beachboard (10.1074/jbc.REV120.013930_bib312) 2015; 89
Kumar (10.1074/jbc.REV120.013930_bib61) 2017; 141
Yue (10.1074/jbc.REV120.013930_bib258) 2018; 9
Narayanan (10.1074/jbc.REV120.013930_bib160) 2000; 74
Devaraj (10.1074/jbc.REV120.013930_bib230) 2007; 282
DeDiego (10.1074/jbc.REV120.013930_bib255) 2014; 88
Wang (10.1074/jbc.REV120.01
References_xml – volume: 96
  start-page: 59
  year: 2016
  end-page: 126
  ident: bib298
  article-title: The nonstructural proteins directing coronavirus RNA synthesis and processing
  publication-title: Adv. Virus. Res
– volume: 9
  start-page: e00218
  year: 2018
  end-page: e00221
  ident: bib140
  article-title: Coronavirus susceptibility to the antiviral remdesivir (GS-5734) is mediated by the viral polymerase and the proofreading exoribonuclease
  publication-title: mBio
– volume: 82
  start-page: 300
  year: 2008
  end-page: 310
  ident: bib215
  article-title: Type I interferons are essential in controlling neurotropic coronavirus infection irrespective of functional CD8 T cells
  publication-title: J. Virol
– volume: 3
  start-page: 237
  year: 2016
  end-page: 261
  ident: bib4
  article-title: Structure, function, and evolution of coronavirus spike proteins
  publication-title: Annu. Rev. Virol
– volume: 21
  start-page: 2076
  year: 2002
  end-page: 2086
  ident: bib21
  article-title: Crystal structure of murine sCEACAM1a[1,4]: a coronavirus receptor in the CEA family
  publication-title: EMBO J
– volume: 581
  start-page: 215
  year: 2020
  end-page: 220
  ident: bib34
  article-title: Structure of the SARS-CoV-2 spike receptor-binding domain bound to the ACE2 receptor
  publication-title: Nature
– volume: 131
  start-page: 339
  year: 1995
  end-page: 349
  ident: bib162
  article-title: Envelope glycoprotein interactions in coronavirus assembly
  publication-title: J. Cell Biol
– volume: 85
  start-page: 4122
  year: 2011
  end-page: 4134
  ident: bib10
  article-title: Evidence that TMPRSS2 activates the severe acute respiratory syndrome coronavirus spike protein for membrane fusion and reduces viral control by the humoral immune response
  publication-title: J. Virol
– volume: 89
  start-page: 1960
  year: 2008
  end-page: 1969
  ident: bib271
  article-title: Severe acute respiratory syndrome coronavirus 3a protein activates the mitochondrial death pathway through p38 MAP kinase activation
  publication-title: J. Gen. Virol
– volume: 579
  start-page: 265
  year: 2020
  end-page: 269
  ident: bib188
  article-title: A new coronavirus associated with human respiratory disease in China
  publication-title: Nature
– volume: 479–480
  start-page: 66
  year: 2015
  end-page: 74
  ident: bib126
  article-title: Innate immune restriction and antagonism of viral RNA lacking 2′-
  publication-title: Virology
– volume: 13
  start-page: 4873
  year: 2008
  end-page: 4881
  ident: bib55
  article-title: The role of programmed-1 ribosomal frameshifting in coronavirus propagation
  publication-title: Front. Biosci
– volume: 85
  start-page: 6381
  year: 2011
  end-page: 6389
  ident: bib136
  article-title: Blocking eIF4E-eIF4G interaction as a strategy to impair coronavirus replication
  publication-title: J. Virol
– volume: 8
  start-page: e01503
  year: 2017
  end-page: e01517
  ident: bib119
  article-title: Proofreading-deficient coronaviruses adapt for increased fitness over long-term passage without reversion of exoribonuclease-inactivating mutations
  publication-title: mBio
– volume: 89
  start-page: 10970
  year: 2015
  end-page: 10981
  ident: bib203
  article-title: Middle East respiratory syndrome coronavirus nsp1 inhibits host gene expression by selectively targeting mRNAs transcribed in the nucleus while sparing mRNAs of cytoplasmic origin
  publication-title: J. Virol
– volume: 12
  start-page: e1005473
  year: 2016
  ident: bib51
  article-title: High-resolution analysis of coronavirus gene expression by RNA sequencing and ribosome profiling
  publication-title: PLoS Pathog
– volume: 3
  start-page: 1013
  year: 2002
  end-page: 1018
  ident: bib260
  article-title: To kill or be killed: viral evasion of apoptosis
  publication-title: Nat. Immunol
– volume: 426
  start-page: 450
  year: 2003
  end-page: 454
  ident: bib8
  article-title: Angiotensin-converting enzyme 2 is a functional receptor for the SARS coronavirus
  publication-title: Nature
– volume: 94
  year: 2020
  ident: bib32
  article-title: Receptor recognition by the novel coronavirus from Wuhan: an analysis based on decade-long structural studies of SARS coronavirus
  publication-title: J. Virol
– volume: 583
  start-page: 459
  year: 2020
  end-page: 468
  ident: bib137
  article-title: A SARS-CoV-2 protein interaction map reveals targets for drug repurposing
  publication-title: Nature
– volume: 141
  start-page: 101
  year: 2017
  end-page: 106
  ident: bib61
  article-title: Identification and evaluation of potent Middle East respiratory syndrome coronavirus (MERS-CoV) 3CLPro inhibitors
  publication-title: Antiviral Res
– volume: 362
  start-page: 293
  year: 2003
  end-page: 294
  ident: bib223
  article-title: Treatment of SARS with human interferons
  publication-title: Lancet
– volume: 235
  start-page: 1
  year: 1997
  end-page: 9
  ident: bib123
  article-title: New insights into the mechanisms of RNA recombination
  publication-title: Virology
– volume: 79
  start-page: 2506
  year: 2005
  end-page: 2516
  ident: bib77
  article-title: Role of nucleotides immediately flanking the transcription-regulating sequence core in coronavirus subgenomic mRNA synthesis
  publication-title: J. Virol
– volume: 111
  start-page: 15214
  year: 2014
  end-page: 15219
  ident: bib13
  article-title: Host cell entry of Middle East respiratory syndrome coronavirus after two-step, furin-mediated activation of the spike protein
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 26
  start-page: 450
  year: 2020
  end-page: 452
  ident: bib31
  article-title: The proximal origin of SARS-CoV-2
  publication-title: Nat. Med
– volume: 190
  start-page: 1119
  year: 2004
  end-page: 1126
  ident: bib279
  article-title: Neutralizing antibodies in patients with severe acute respiratory syndrome-associated coronavirus infection
  publication-title: J. Infect. Dis
– volume: 295
  start-page: 4773
  year: 2020
  end-page: 4779
  ident: bib141
  article-title: The antiviral compound remdesivir potently inhibits RNA-dependent RNA polymerase from Middle East respiratory syndrome coronavirus
  publication-title: J. Biol. Chem
– volume: 27
  start-page: 325
  year: 2020
  end-page: 328
  ident: bib189
  article-title: Genome composition and divergence of the novel coronavirus (2019-nCoV) originating in China
  publication-title: Cell Host Microbe
– volume: 196
  start-page: 405
  year: 2007
  end-page: 415
  ident: bib275
  article-title: Open reading frame 8a of the human severe acute respiratory syndrome coronavirus not only promotes viral replication but also induces apoptosis
  publication-title: J. Infect. Dis
– volume: 1
  start-page: 111
  year: 2014
  end-page: 132
  ident: bib90
  article-title: Thinking outside the triangle: replication fidelity of the largest RNA viruses
  publication-title: Annu. Rev. Virol
– volume: 81
  start-page: 548
  year: 2007
  end-page: 557
  ident: bib232
  article-title: Severe acute respiratory syndrome coronavirus open reading frame (ORF) 3b, ORF 6, and nucleocapsid proteins function as interferon antagonists
  publication-title: J. Virol
– volume: 103
  start-page: 5108
  year: 2006
  end-page: 5113
  ident: bib112
  article-title: Discovery of an RNA virus 3′→5′ exoribonuclease that is critically involved in coronavirus RNA synthesis
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 361
  start-page: 243
  year: 2006
  end-page: 256
  ident: bib316
  article-title: RNA recognition and cleavage by the SARS coronavirus endoribonuclease
  publication-title: J. Mol. Biol
– volume: 287
  start-page: 1
  year: 2005
  end-page: 30
  ident: bib50
  article-title: Coronavirus genome structure and replication
  publication-title: Curr. Top. Microbiol. Immunol
– volume: 57
  start-page: 328
  year: 1986
  end-page: 334
  ident: bib89
  article-title: Coronavirus minus-strand RNA synthesis and effect of cycloheximide on coronavirus RNA synthesis
  publication-title: J. Virol
– volume: 103
  start-page: 12885
  year: 2006
  end-page: 12890
  ident: bib195
  article-title: Severe acute respiratory syndrome coronavirus nsp1 protein suppresses host gene expression by promoting host mRNA degradation
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 6
  start-page: e1000863
  year: 2010
  ident: bib130
  article-title: reconstitution of SARS-coronavirus mRNA cap methylation
  publication-title: PLoS Pathog
– volume: 7
  start-page: 1040
  year: 2013
  end-page: 1047
  ident: bib211
  article-title: Epidemiological and clinical features of human coronavirus infections among different subsets of patients
  publication-title: Influenza Other Respir. Viruses
– volume: 11
  start-page: 2251
  year: 2020
  end-page: 2256
  ident: bib288
  article-title: A human monoclonal antibody blocking SARS-CoV-2 infection
  publication-title: Nat. Commun
– volume: 4
  start-page: 26
  year: 2016
  ident: bib244
  article-title: Human coronaviruses: a review of virus-host interactions
  publication-title: Diseases
– year: 2020
  ident: bib125
  article-title: The coronavirus proofreading exoribonuclease mediates extensive viral recombination
  publication-title: bioRxiv
– volume: 85
  start-page: 12201
  year: 2011
  end-page: 12215
  ident: bib294
  article-title: A double-inactivated severe acute respiratory syndrome coronavirus vaccine provides incomplete protection in mice and induces increased eosinophilic proinflammatory pulmonary response upon challenge
  publication-title: J. Virol
– volume: 311
  start-page: 870
  year: 2003
  end-page: 876
  ident: bib252
  article-title: Activation of AP-1 signal transduction pathway by SARS coronavirus nucleocapsid protein
  publication-title: Biochem. Biophys. Res. Commun
– volume: 78
  start-page: 12557
  year: 2004
  end-page: 12565
  ident: bib158
  article-title: Generation of synthetic severe acute respiratory syndrome coronavirus pseudoparticles: implications for assembly and vaccine production
  publication-title: J. Virol
– volume: 279
  start-page: 43661
  year: 2004
  end-page: 43666
  ident: bib166
  article-title: A novel sorting signal for intracellular localization is present in the S protein of a porcine coronavirus but absent from severe acute respiratory syndrome-associated coronavirus
  publication-title: J. Biol. Chem
– volume: 300
  start-page: 1394
  year: 2003
  end-page: 1399
  ident: bib184
  article-title: Characterization of a novel coronavirus associated with severe acute respiratory syndrome
  publication-title: Science
– volume: 93
  start-page: 494
  year: 2012
  end-page: 503
  ident: bib216
  article-title: Infection of human alveolar macrophages by human coronavirus strain 229E
  publication-title: J. Gen. Virol
– volume: 79
  start-page: 14909
  year: 2005
  end-page: 14922
  ident: bib178
  article-title: Severe acute respiratory syndrome coronavirus group-specific open reading frames encode nonessential functions for replication in cell cultures and mice
  publication-title: J. Virol
– volume: 84
  start-page: 4619
  year: 2010
  end-page: 4629
  ident: bib63
  article-title: Deubiquitinating and interferon antagonism activities of coronavirus papain-like proteases
  publication-title: J. Virol
– volume: 367
  start-page: 1260
  year: 2020
  end-page: 1263
  ident: bib33
  article-title: Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation
  publication-title: Science
– volume: 150
  start-page: 123
  year: 2018
  end-page: 129
  ident: bib135
  article-title: Broad-spectrum antiviral activity of the eIF4A inhibitor silvestrol against corona- and picornaviruses
  publication-title: Antiviral Res
– volume: 21
  start-page: 1586
  year: 2007
  end-page: 1596
  ident: bib248
  article-title: Spike protein of SARS-CoV stimulates cyclooxygenase-2 expression via both calcium-dependent and calcium-independent protein kinase C pathways
  publication-title: FASEB J
– volume: 81
  start-page: 20
  year: 2007
  end-page: 29
  ident: bib79
  article-title: A contemporary view of coronavirus transcription
  publication-title: J. Virol
– volume: 309
  start-page: 1864
  year: 2005
  end-page: 1868
  ident: bib286
  article-title: Structure of SARS coronavirus spike receptor-binding domain complexed with receptor
  publication-title: Science
– volume: 286
  start-page: 3222
  year: 2019
  end-page: 3239
  ident: bib74
  article-title: Interaction of coronavirus nucleocapsid protein with the 5′- and 3′- ends of the coronavirus genome is involved in genome circularization and negative-strand RNA synthesis
  publication-title: FEBS J
– volume: 78
  start-page: 5619
  year: 2004
  end-page: 5632
  ident: bib108
  article-title: Multiple enzymatic activities associated with severe acute respiratory syndrome coronavirus helicase
  publication-title: J. Virol
– volume: 56
  start-page: 4718
  year: 2012
  end-page: 4728
  ident: bib145
  article-title: Severe acute respiratory syndrome coronavirus replication inhibitor that interferes with the nucleic acid unwinding of the viral helicase
  publication-title: Antimicrob. Agents Chemother
– volume: 3
  start-page: e3299
  year: 2008
  ident: bib296
  article-title: Genome-wide analysis of protein-protein interactions and involvement of viral proteins in SARS-CoV replication
  publication-title: PLoS ONE
– volume: 77
  start-page: 4597
  year: 2003
  end-page: 4608
  ident: bib303
  article-title: The small envelope protein E is not essential for murine coronavirus replication
  publication-title: J. Virol
– volume: 4
  start-page: 280
  year: 2014
  end-page: 288
  ident: bib247
  article-title: Pleiotropic effects of interleukin-6 in a “two-hit” murine model of acute respiratory distress syndrome
  publication-title: Pulm. Circ
– volume: 83
  start-page: 7221
  year: 2009
  end-page: 7234
  ident: bib308
  article-title: Identification of
  publication-title: J. Virol
– volume: 8
  start-page: e76469
  year: 2013
  ident: bib16
  article-title: Role of the spike glycoprotein of human Middle East respiratory syndrome coronavirus (MERS-CoV) in virus entry and syncytia formation
  publication-title: PLoS ONE
– volume: 86
  start-page: 13598
  year: 2012
  end-page: 13608
  ident: bib202
  article-title: Severe acute respiratory syndrome coronavirus protein nsp1 is a novel eukaryotic translation inhibitor that represses multiple steps of translation initiation
  publication-title: J. Virol
– volume: 14
  start-page: 154
  year: 2008
  end-page: 161
  ident: bib120
  article-title: Engineering attenuated virus vaccines by controlling replication fidelity
  publication-title: Nat. Med
– volume: 213
  start-page: 904
  year: 2016
  end-page: 914
  ident: bib266
  article-title: Middle East respiratory syndrome coronavirus efficiently infects human primary T lymphocytes and activates the extrinsic and intrinsic apoptosis pathways
  publication-title: J. Infect. Dis
– volume: 142
  start-page: 19
  year: 2009
  end-page: 27
  ident: bib251
  article-title: SARS coronavirus spike protein-induced innate immune response occurs via activation of the NF-κB pathway in human monocyte macrophages
  publication-title: Virus Res
– volume: 11
  start-page: 411
  year: 2005
  end-page: 416
  ident: bib280
  article-title: Longitudinally profiling neutralizing antibody response to SARS coronavirus with pseudotypes
  publication-title: Emerg. Infect. Dis
– volume: 13
  start-page: 59
  year: 2006
  end-page: 72
  ident: bib306
  article-title: Modular organization of SARS coronavirus nucleocapsid protein
  publication-title: J. Biomed. Sci
– volume: 82
  start-page: 11318
  year: 2008
  end-page: 11330
  ident: bib3
  article-title: The M, E, and N structural proteins of the severe acute respiratory syndrome coronavirus are required for efficient assembly, trafficking, and release of virus-like particles
  publication-title: J. Virol
– volume: 5
  start-page: e01114
  year: 2014
  end-page: e01174
  ident: bib210
  article-title: Pathogenic influenza viruses and coronaviruses utilize similar and contrasting approaches to control interferon-stimulated gene responses
  publication-title: mBio
– volume: 81
  start-page: 813
  year: 2007
  end-page: 821
  ident: bib213
  article-title: Lethal infection of K18-hACE2 mice infected with severe acute respiratory syndrome coronavirus
  publication-title: J. Virol
– volume: 458-459
  start-page: 125
  year: 2014
  end-page: 135
  ident: bib69
  article-title: Membrane rearrangements mediated by coronavirus nonstructural proteins 3 and 4
  publication-title: Virology
– volume: 27
  start-page: 992
  year: 2020
  end-page: 1000.e3
  ident: bib246
  article-title: Complex immune dysregulation in COVID-19 patients with severe respiratory failure
  publication-title: Cell Host Microbe
– volume: 6
  start-page: e226
  year: 2008
  ident: bib66
  article-title: SARS-coronavirus replication is supported by a reticulovesicular network of modified endoplasmic reticulum
  publication-title: PLoS Biol
– volume: 64
  start-page: 6045
  year: 1990
  end-page: 6053
  ident: bib168
  article-title: Analysis of efficiently packaged defective interfering RNAs of murine coronavirus: localization of a possible RNA-packaging signal
  publication-title: J. Virol
– volume: 84
  start-page: 12658
  year: 2010
  end-page: 12664
  ident: bib11
  article-title: Efficient activation of the severe acute respiratory syndrome coronavirus spike protein by the transmembrane protease TMPRSS2
  publication-title: J. Virol
– volume: 77
  start-page: 7890
  year: 2003
  end-page: 7902
  ident: bib169
  article-title: Transmissible gastroenteritis coronavirus packaging signal is located at the 5′ end of the virus genome
  publication-title: J. Virol
– volume: 102
  start-page: 11876
  year: 2005
  end-page: 11881
  ident: bib24
  article-title: Inhibitors of cathepsin L prevent severe acute respiratory syndrome coronavirus entry
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 767
  start-page: 17
  year: 2013
  end-page: 46
  ident: bib110
  article-title: Structure and mechanisms of SF1 DNA helicases
  publication-title: Adv. Exp. Med. Biol
– volume: 83
  start-page: 3743
  year: 2009
  end-page: 3753
  ident: bib238
  article-title: Organ-specific attenuation of murine hepatitis virus strain A59 by replacement of catalytic residues in the putative viral cyclic phosphodiesterase ns2
  publication-title: J. Virol
– volume: 85
  start-page: 4572
  year: 2011
  end-page: 4577
  ident: bib68
  article-title: Mobility and interactions of coronavirus nonstructural protein 4
  publication-title: J. Virol
– volume: 111
  start-page: E3900
  year: 2014
  end-page: E3909
  ident: bib91
  article-title: One severe acute respiratory syndrome coronavirus protein complex integrates processive RNA polymerase and exonuclease activities
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 350
  start-page: 358
  year: 2006
  end-page: 369
  ident: bib39
  article-title: Furin cleavage of the SARS coronavirus spike glycoprotein enhances cell-cell fusion but does not affect virion entry
  publication-title: Virology
– volume: 296
  start-page: 177
  year: 2002
  end-page: 189
  ident: bib176
  article-title: The group-specific murine coronavirus genes are not essential, but their deletion, by reverse genetics, is attenuating in the natural host
  publication-title: Virology
– volume: 382
  start-page: 1177
  year: 2020
  end-page: 1179
  ident: bib283
  article-title: SARS-CoV-2 viral load in upper respiratory specimens of infected patients
  publication-title: N. Engl. J. Med
– volume: 79
  start-page: 11335
  year: 2005
  end-page: 11342
  ident: bib236
  article-title: A severe acute respiratory syndrome-associated coronavirus-specific protein enhances virulence of an attenuated murine coronavirus
  publication-title: J. Virol
– volume: 101
  start-page: 3792
  year: 2004
  end-page: 3796
  ident: bib101
  article-title: The severe acute respiratory syndrome-coronavirus replicative protein nsp9 is a single-stranded RNA-binding subunit unique in the RNA virus world
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 8
  start-page: e70548
  year: 2013
  ident: bib100
  article-title: Regulation of coronaviral poly(A) tail length during infection
  publication-title: PLoS ONE
– volume: 16
  start-page: 249
  year: 2012
  end-page: 258
  ident: bib58
  article-title: Targeting frameshifting in the human immunodeficiency virus
  publication-title: Expert Opin. Ther. Targets
– volume: 7
  start-page: e00212
  year: 2016
  end-page: e00258
  ident: bib237
  article-title: Middle East respiratory syndrome coronavirus NS4b protein inhibits host RNase L activation
  publication-title: mBio
– volume: 494
  start-page: 83
  year: 2001
  end-page: 89
  ident: bib179
  article-title: Analysis of nonessential gene function in recombinant MHV-JHM. Gene 4 knockout recombinant virus
  publication-title: Adv. Exp. Med. Biol
– volume: 91
  start-page: 14
  year: 2017
  end-page: 51
  ident: bib314
  article-title: Porcine deltacoronavirus nsp5 antagonizes type I interferon signaling by cleaving STAT2
  publication-title: J. Virol
– volume: 133
  start-page: 113
  year: 2008
  end-page: 121
  ident: bib187
  article-title: SARS coronavirus accessory proteins
  publication-title: Virus Res
– volume: 84
  start-page: 7703
  year: 2010
  end-page: 7712
  ident: bib256
  article-title: Upregulation of the chemokine (C-C motif) ligand 2 via a severe acute respiratory syndrome coronavirus spike-ACE2 signaling pathway
  publication-title: J. Virol
– volume: 7
  start-page: e1002294
  year: 2011
  ident: bib319
  article-title: Biochemical and structural insights into the mechanisms of SARS coronavirus RNA ribose 2′-
  publication-title: PLoS Pathog
– volume: 153
  start-page: 299
  year: 2010
  end-page: 304
  ident: bib322
  article-title: SARS-coronavirus protein 6 conformations required to impede protein import into the nucleus
  publication-title: Virus Res
– volume: 18
  start-page: 1825
  year: 1990
  end-page: 1832
  ident: bib52
  article-title: The primary structure and expression of the second open reading frame of the polymerase gene of the coronavirus MHV-A59; a highly conserved polymerase is expressed by an efficient ribosomal frameshifting mechanism
  publication-title: Nucleic Acids Res
– volume: 330
  start-page: 322
  year: 2004
  end-page: 331
  ident: bib163
  article-title: SARS coronavirus E protein forms cation-selective ion channels
  publication-title: Virology
– volume: 78
  start-page: 3863
  year: 2004
  end-page: 3871
  ident: bib177
  article-title: Live, attenuated coronavirus vaccines through the directed deletion of group-specific genes provide protection against feline infectious peritonitis
  publication-title: J. Virol
– volume: 78
  start-page: 779
  year: 2020
  end-page: 784.e5
  ident: bib37
  article-title: A multibasic cleavage site in the spike protein of SARS-CoV-2 is essential for infection of human lung cells
  publication-title: Mol. Cell
– volume: 87
  start-page: 177
  year: 2013
  end-page: 186
  ident: bib84
  article-title: Long-distance RNA-RNA interactions in the coronavirus genome form high-order structures promoting discontinuous RNA synthesis during transcription
  publication-title: J. Virol
– volume: 20
  start-page: 363
  year: 2020
  end-page: 374
  ident: bib44
  article-title: The trinity of COVID-19: immunity, inflammation and intervention
  publication-title: Nat. Rev. Immunol
– volume: 47
  start-page: 6538
  year: 2019
  end-page: 6550
  ident: bib106
  article-title: Delicate structural coordination of the severe acute respiratory syndrome coronavirus Nsp13 upon ATP hydrolysis
  publication-title: Nucleic Acids Res
– volume: 179
  start-page: 104811
  year: 2020
  ident: bib225
  article-title: Antiviral activities of type I interferons to SARS-CoV-2 infection
  publication-title: Antiviral Res
– volume: 392
  start-page: 135
  year: 2005
  end-page: 143
  ident: bib264
  article-title: Bcl-xL inhibits T-cell apoptosis induced by expression of SARS coronavirus E protein in the absence of growth factors
  publication-title: Biochem. J
– year: 2020
  ident: bib1
  article-title: Coronavirus infections—more than just the common cold
  publication-title: JAMA
– volume: 81
  start-page: 8722
  year: 2007
  end-page: 8729
  ident: bib26
  article-title: Clathrin-dependent entry of severe acute respiratory syndrome coronavirus into target cells expressing ACE2 with the cytoplasmic tail deleted
  publication-title: J. Virol
– volume: 28
  start-page: 19
  year: 2009
  end-page: 38
  ident: bib41
  article-title: History of highly pathogenic avian influenza
  publication-title: Rev. Sci. Tech
– volume: 81
  start-page: 9812
  year: 2007
  end-page: 9824
  ident: bib234
  article-title: Severe acute respiratory syndrome coronavirus ORF6 antagonizes STAT1 function by sequestering nuclear import factors on the rough endoplasmic reticulum/Golgi membrane
  publication-title: J. Virol
– volume: 106
  start-page: 12067
  year: 2009
  end-page: 12072
  ident: bib226
  article-title: 5′-Triphosphate RNA requires base-paired structures to activate antiviral signaling via RIG-I
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 16
  start-page: 1134
  year: 2009
  end-page: 1140
  ident: bib204
  article-title: A two-pronged strategy to suppress host protein synthesis by SARS coronavirus Nsp1 protein
  publication-title: Nat. Struct. Mol. Biol
– volume: 157
  start-page: 2095
  year: 2012
  end-page: 2104
  ident: bib95
  article-title: Biochemical characterization of a recombinant SARS coronavirus nsp12 RNA-dependent RNA polymerase capable of copying viral RNA templates
  publication-title: Arch. Virol
– volume: 39
  start-page: 1071
  year: 2004
  end-page: 1075
  ident: bib245
  article-title: Temporal relationship of viral load, ribavirin, interleukin (IL)-6, IL-8, and clinical progression in patients with severe acute respiratory syndrome
  publication-title: Clin. Infect. Dis
– volume: 10
  start-page: 1814
  year: 2019
  end-page: 1816
  ident: bib240
  article-title: Antagonism of dsRNA-induced innate immune pathways by NS4a and NS4b accessory proteins during MERS coronavirus infection
  publication-title: mBio
– volume: 64
  start-page: 5367
  year: 1990
  end-page: 5375
  ident: bib299
  article-title: Assembly of coronavirus spike protein into trimers and its role in epitope expression
  publication-title: J. Virol
– volume: 62
  start-page: 4280
  year: 1988
  end-page: 4287
  ident: bib173
  article-title: Interactions between coronavirus nucleocapsid protein and viral RNAs: implications for viral transcription
  publication-title: J. Virol
– volume: 87
  start-page: 1953
  year: 2006
  end-page: 1960
  ident: bib207
  article-title: Interaction of severe acute respiratory syndrome-associated coronavirus with dendritic cells
  publication-title: J. Gen. Virol
– volume: 87
  start-page: 5182
  year: 2013
  end-page: 5192
  ident: bib159
  article-title: Functional analysis of the murine coronavirus genomic RNA packaging signal
  publication-title: J. Virol
– volume: 82
  start-page: 4471
  year: 2008
  end-page: 4479
  ident: bib196
  article-title: Severe acute respiratory syndrome coronavirus nsp1 suppresses host gene expression, including that of type I interferon, in infected cells
  publication-title: J. Virol
– volume: 10
  start-page: 290
  year: 2004
  end-page: 293
  ident: bib224
  article-title: Pegylated interferon-α protects type 1 pneumocytes against SARS coronavirus infection in macaques
  publication-title: Nat. Med
– volume: 143
  start-page: 1667
  year: 2018
  end-page: 1676
  ident: bib143
  article-title: Functionalized 2,1-benzothiazine 2,2-dioxides as new inhibitors of Dengue NS5 RNA-dependent RNA polymerase
  publication-title: Eur. J. Med. Chem
– volume: 27
  start-page: 776
  year: 2019
  end-page: 791.e7
  ident: bib200
  article-title: The influenza A virus endoribonuclease PA-X usurps host mRNA processing machinery to limit host gene expression
  publication-title: Cell Rep
– volume: 91
  start-page: e02116
  year: 2017
  end-page: e02143
  ident: bib229
  article-title: The severe acute respiratory syndrome coronavirus nucleocapsid inhibits type I interferon production by interfering with TRIM25-mediated RIG-I ubiquitination
  publication-title: J. Virol
– volume: 38
  start-page: 623
  year: 2020
  end-page: 661
  ident: bib48
  article-title: The architecture of SARS-CoV-2 transcriptome
  publication-title: Cell
– volume: 38
  start-page: 203
  year: 2010
  end-page: 214
  ident: bib94
  article-title: The RNA polymerase activity of SARS-coronavirus nsp12 is primer dependent
  publication-title: Nucleic Acids Res
– volume: 6
  start-page: e19436
  year: 2011
  ident: bib276
  article-title: SARS-CoV 9b protein diffuses into nucleus, undergoes active Crm1 mediated nucleocytoplasmic export and triggers apoptosis when retained in the nucleus
  publication-title: PLoS ONE
– volume: 361
  start-page: 18
  year: 2007
  end-page: 26
  ident: bib242
  article-title: Group 2 coronaviruses prevent immediate early interferon induction by protection of viral RNA from host cell recognition
  publication-title: Virology
– volume: 26
  start-page: 453
  year: 2020
  end-page: 455
  ident: bib278
  article-title: Breadth of concomitant immune responses prior to patient recovery: a case report of non-severe COVID-19
  publication-title: Nat. Med
– volume: 368
  start-page: 409
  year: 2020
  end-page: 412
  ident: bib60
  article-title: Crystal structure of SARS-CoV-2 main protease provides a basis for design of improved α-ketoamide inhibitors
  publication-title: Science
– volume: 186
  start-page: 7264
  year: 2011
  end-page: 7268
  ident: bib292
  article-title: Lack of peripheral memory B cell responses in recovered patients with severe acute respiratory syndrome: a six-year follow-up study
  publication-title: J. Immunol
– volume: 282
  start-page: 32208
  year: 2007
  end-page: 32221
  ident: bib230
  article-title: Regulation of IRF-3-dependent innate immunity by the papain-like protease domain of the severe acute respiratory syndrome coronavirus
  publication-title: J. Biol. Chem
– volume: 202
  start-page: 12
  year: 2015
  end-page: 32
  ident: bib107
  article-title: What we know but do not understand about nidovirus helicases
  publication-title: Virus Res
– volume: 10
  start-page: 676
  year: 2004
  end-page: 678
  ident: bib290
  article-title: Retrospective comparison of convalescent plasma with continuing high-dose methylprednisolone treatment in SARS patients
  publication-title: Clin. Microbiol. Infect
– volume: 89
  start-page: 9029
  year: 2015
  end-page: 9043
  ident: bib307
  article-title: The nucleocapsid protein of coronaviruses acts as a viral suppressor of RNA silencing in mammalian cells
  publication-title: J. Virol
– volume: 82
  start-page: 9829
  year: 2008
  end-page: 9838
  ident: bib228
  article-title: Murine coronavirus mouse hepatitis virus is recognized by MDA5 and induces type I interferon in brain macrophages/microglia
  publication-title: J. Virol
– volume: 18
  start-page: 1820
  year: 2012
  end-page: 1826
  ident: bib118
  article-title: A live, impaired-fidelity coronavirus vaccine protects in an aged, immunocompromised mouse model of lethal disease
  publication-title: Nat. Med
– volume: 1
  start-page: 110
  year: 2018
  end-page: 179
  ident: bib124
  article-title: Evaluation of a recombination-resistant coronavirus as a broadly applicable, rapidly implementable vaccine platform
  publication-title: Commun. Biol
– volume: 80
  start-page: 296
  year: 2006
  end-page: 305
  ident: bib181
  article-title: Neither the RNA nor the proteins of open reading frames 3a and 3b of the coronavirus infectious bronchitis virus are essential for replication
  publication-title: J. Virol
– volume: 75
  start-page: 8173
  year: 2001
  end-page: 8186
  ident: bib20
  article-title: Targeted disruption of the Ceacam1 (MHVR) gene leads to reduced susceptibility of mice to mouse hepatitis virus infection
  publication-title: J. Virol
– volume: 117
  start-page: 17
  year: 2006
  end-page: 37
  ident: bib49
  article-title: Nidovirales: evolving the largest RNA virus genome
  publication-title: Virus Res
– volume: 48
  start-page: 1
  year: 1997
  end-page: 100
  ident: bib185
  article-title: The molecular biology of coronaviruses
  publication-title: Adv. Virus Res
– volume: 18
  start-page: 290
  year: 2008
  end-page: 301
  ident: bib25
  article-title: SARS coronavirus entry into host cells through a novel clathrin- and caveolae-independent endocytic pathway
  publication-title: Cell Res
– volume: 96
  start-page: 127
  year: 2016
  end-page: 163
  ident: bib73
  article-title: Coronavirus cis-acting RNA elements
  publication-title: Adv. Virus Res
– volume: 78
  start-page: 980
  year: 2004
  end-page: 994
  ident: bib78
  article-title: Sequence motifs involved in the regulation of discontinuous coronavirus subgenomic RNA synthesis
  publication-title: J. Virol
– volume: 368
  start-page: 948
  year: 2020
  end-page: 950
  ident: bib47
  article-title: A strategic approach to COVID-19 vaccine R&D
  publication-title: Science
– volume: 395
  start-page: 497
  year: 2020
  end-page: 506
  ident: bib220
  article-title: Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China
  publication-title: Lancet
– volume: 10
  start-page: e1004502
  year: 2014
  ident: bib22
  article-title: Coronavirus cell entry occurs through the endo-/lysosomal pathway in a proteolysis-dependent manner
  publication-title: PLoS Pathog
– volume: 79
  start-page: 8065
  year: 2005
  end-page: 8078
  ident: bib182
  article-title: Gene 5 of the avian coronavirus infectious bronchitis virus is not essential for replication
  publication-title: J. Virol
– volume: 300
  start-page: 1763
  year: 2003
  end-page: 1767
  ident: bib62
  article-title: Coronavirus main proteinase (3CLpro) structure: basis for design of anti-SARS drugs
  publication-title: Science
– volume: 9
  start-page: 904
  year: 2018
  ident: bib258
  article-title: SARS-coronavirus open reading frame-3a drives multimodal necrotic cell death
  publication-title: Cell Death Dis
– volume: 83
  start-page: 2368
  year: 2009
  end-page: 2373
  ident: bib323
  article-title: Severe acute respiratory syndrome coronavirus protein 6 is required for optimal replication
  publication-title: J. Virol
– volume: 10
  start-page: 320
  year: 2004
  end-page: 326
  ident: bib148
  article-title: Ultrastructural characterization of SARS coronavirus
  publication-title: Emerg. Infect. Dis
– volume: 11
  start-page: 362
  year: 2004
  end-page: 371
  ident: bib277
  article-title: Profiles of antibody responses against severe acute respiratory syndrome coronavirus recombinant proteins and their potential use as diagnostic markers
  publication-title: Clin. Diagn. Lab. Immunol
– volume: 287
  start-page: 31
  year: 2005
  end-page: 55
  ident: bib70
  article-title: Coronavirus transcription: a perspective
  publication-title: Curr. Top. Microbiol. Immunol
– volume: 361
  start-page: 1767
  year: 2003
  end-page: 1772
  ident: bib284
  article-title: Clinical progression and viral load in a community outbreak of coronavirus-associated SARS pneumonia: a prospective study
  publication-title: Lancet
– volume: 8
  start-page: 237
  year: 2011
  end-page: 248
  ident: bib72
  article-title: RNA-RNA and RNA-protein interactions in coronavirus replication and transcription
  publication-title: RNA Biol
– volume: 83
  start-page: 3007
  year: 2009
  end-page: 3018
  ident: bib103
  article-title: Severe acute respiratory syndrome coronavirus nsp9 dimerization is essential for efficient viral growth
  publication-title: J. Virol
– volume: 117
  start-page: 11727
  year: 2020
  end-page: 11734
  ident: bib29
  article-title: Cell entry mechanisms of SARS-CoV-2
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 11
  start-page: 607
  year: 2012
  end-page: 616
  ident: bib239
  article-title: Antagonism of the interferon-induced OAS-RNase L pathway by murine coronavirus ns2 protein is required for virus replication and liver pathology
  publication-title: Cell Host Microbe
– volume: 11
  start-page: e0165077
  year: 2016
  ident: bib134
  article-title: Characterization of the role of hexamer AGUAAA and poly(A) tail in coronavirus polyadenylation
  publication-title: PLoS ONE
– volume: 93
  start-page: e01319
  year: 2019
  end-page: e01348
  ident: bib144
  article-title: Small-molecule antiviral β-
  publication-title: J. Virol
– volume: 74
  start-page: 8127
  year: 2000
  end-page: 8134
  ident: bib160
  article-title: Characterization of the coronavirus M protein and nucleocapsid interaction in infected cells
  publication-title: J. Virol
– volume: 580
  start-page: 6807
  year: 2006
  end-page: 6812
  ident: bib250
  article-title: Augmentation of chemokine production by severe acute respiratory syndrome coronavirus 3a/X1 and 7a/X4 proteins through NF-κB activation
  publication-title: FEBS Lett
– volume: 6
  start-page: e1000896
  year: 2010
  ident: bib114
  article-title: Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing
  publication-title: PLoS Pathog
– volume: 181
  start-page: 1036
  year: 2020
  end-page: 1045.e9
  ident: bib222
  article-title: Imbalanced host response to SARS-CoV-2 drives development of COVID-19
  publication-title: Cell
– volume: 213
  start-page: 877
  year: 2016
  end-page: 879
  ident: bib265
  article-title: Discovery of T-cell infection and apoptosis by Middle East respiratory syndrome coronavirus
  publication-title: J. Infect. Dis
– volume: 2
  start-page: e459
  year: 2007
  ident: bib295
  article-title: Analysis of intraviral protein-protein interactions of the SARS coronavirus ORFeome
  publication-title: PLoS ONE
– volume: 25
  start-page: 4933
  year: 2006
  end-page: 4942
  ident: bib97
  article-title: A second, non-canonical RNA-dependent RNA polymerase in SARS coronavirus
  publication-title: EMBO J
– volume: 106
  start-page: 2366
  year: 2005
  end-page: 2374
  ident: bib206
  article-title: Chemokine up-regulation in SARS-coronavirus-infected, monocyte-derived human dendritic cells
  publication-title: Blood
– volume: 117
  start-page: 8094
  year: 2020
  end-page: 8103
  ident: bib241
  article-title: Coronavirus endoribonuclease targets viral polyuridine sequences to evade activating host sensors
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 450–451
  start-page: 64
  year: 2014
  end-page: 70
  ident: bib64
  article-title: MERS-CoV papain-like protease has deISGylating and deubiquitinating activities
  publication-title: Virology
– volume: 368
  start-page: 779
  year: 2020
  end-page: 782
  ident: bib93
  article-title: Structure of the RNA-dependent RNA polymerase from COVID-19 virus
  publication-title: Science
– volume: 83
  start-page: 6631
  year: 2009
  end-page: 6640
  ident: bib321
  article-title: Molecular determinants for subcellular localization of the severe acute respiratory syndrome coronavirus open reading frame 3b protein
  publication-title: J. Virol
– volume: 12
  start-page: 844
  year: 2010
  end-page: 861
  ident: bib150
  article-title: Qualitative and quantitative ultrastructural analysis of the membrane rearrangements induced by coronavirus
  publication-title: Cell. Microbiol
– volume: 18
  start-page: 255
  year: 2006
  end-page: 264
  ident: bib293
  article-title: Differentiation of memory B and T cells
  publication-title: Curr. Opin. Immunol
– volume: 415
  start-page: 69
  year: 2011
  end-page: 82
  ident: bib301
  article-title: Subcellular location and topology of severe acute respiratory syndrome coronavirus envelope protein
  publication-title: Virology
– volume: 5
  start-page: 279
  year: 2013
  end-page: 294
  ident: bib53
  article-title: Altering SARS coronavirus frameshift efficiency affects genomic and subgenomic RNA production
  publication-title: Viruses
– volume: 579
  start-page: 6699
  year: 2005
  end-page: 6704
  ident: bib267
  article-title: Adenovirus-mediated expression of the C-terminal domain of SARS-CoV spike protein is sufficient to induce apoptosis in Vero E6 cells
  publication-title: FEBS Lett
– volume: 79
  start-page: 6620
  year: 2005
  end-page: 6630
  ident: bib85
  article-title: Selective replication of coronavirus genomes that express nucleocapsid protein
  publication-title: J. Virol
– volume: 284
  start-page: 16202
  year: 2009
  end-page: 16209
  ident: bib233
  article-title: Severe acute respiratory syndrome coronavirus M protein inhibits type I interferon production by impeding the formation of TRAF3·TANK·TBK1/IKKε complex
  publication-title: J. Biol. Chem
– volume: 7
  start-page: e36521
  year: 2012
  ident: bib105
  article-title: Mechanism of nucleic acid unwinding by SARS-CoV helicase
  publication-title: PLoS ONE
– volume: 303
  start-page: 1666
  year: 2004
  end-page: 1669
  ident: bib192
  article-title: Molecular evolution of the SARS coronavirus during the course of the SARS epidemic in China
  publication-title: Science
– volume: 81
  start-page: 6771
  year: 2007
  end-page: 6774
  ident: bib171
  article-title: New structure model for the packaging signal in the genome of group IIa coronaviruses
  publication-title: J. Virol
– volume: 13
  start-page: e1006474
  year: 2017
  ident: bib109
  article-title: Crystal structure of Middle East respiratory syndrome coronavirus helicase
  publication-title: PLoS Pathog
– volume: 202
  start-page: 120
  year: 2015
  end-page: 134
  ident: bib5
  article-title: Host cell proteases: critical determinants of coronavirus tropism and pathogenesis
  publication-title: Virus Res
– volume: 109
  start-page: 97
  year: 2014
  end-page: 109
  ident: bib186
  article-title: Accessory proteins of SARS-CoV and other coronaviruses
  publication-title: Antiviral Res
– volume: 2
  start-page: 265
  year: 2015
  end-page: 288
  ident: bib76
  article-title: Continuous and discontinuous RNA synthesis in coronaviruses
  publication-title: Annu. Rev. Virol
– volume: 82
  start-page: 7212
  year: 2008
  end-page: 7222
  ident: bib324
  article-title: Severe acute respiratory syndrome coronavirus protein 6 accelerates murine hepatitis virus infections by more than one mechanism
  publication-title: J. Virol
– volume: 80
  start-page: 785
  year: 2006
  end-page: 793
  ident: bib205
  article-title: 7a protein of severe acute respiratory syndrome coronavirus inhibits cellular protein synthesis and activates p38 mitogen-activated protein kinase
  publication-title: J. Virol
– volume: 43
  start-page: 8416
  year: 2015
  end-page: 8434
  ident: bib96
  article-title: Discovery of an essential nucleotidylating activity associated with a newly delineated conserved domain in the RNA polymerase-containing protein of all nidoviruses
  publication-title: Nucleic Acids Res
– volume: 96
  start-page: 21
  year: 2012
  end-page: 31
  ident: bib146
  article-title: The viral RNA capping machinery as a target for antiviral drugs
  publication-title: Antiviral Res
– volume: 394
  start-page: 544
  year: 2009
  end-page: 557
  ident: bib87
  article-title: Coronavirus N protein N-terminal domain (NTD) specifically binds the transcriptional regulatory sequence (TRS) and melts TRS-cTRS RNA duplexes
  publication-title: J. Mol. Biol
– volume: 115
  start-page: 21
  year: 2015
  end-page: 38
  ident: bib65
  article-title: The SARS-coronavirus papain-like protease: structure, function and inhibition by designed antiviral compounds
  publication-title: Antiviral Res
– volume: 34
  start-page: 743
  year: 2003
  end-page: 748
  ident: bib217
  article-title: Lung pathology of severe acute respiratory syndrome (SARS): a study of 8 autopsy cases from Singapore
  publication-title: Hum. Pathol
– volume: 92
  start-page: 216
  year: 2018
  end-page: 286
  ident: bib318
  article-title: Structural and biochemical characterization of endoribonuclease Nsp15 encoded by Middle East respiratory syndrome coronavirus
  publication-title: J. Virol
– volume: 291
  start-page: 9218
  year: 2016
  end-page: 9232
  ident: bib27
  article-title: Glycopeptide antibiotics potently inhibit cathepsin L in the late endosome/lysosome and block the entry of Ebola virus, Middle East respiratory syndrome coronavirus (MERS-CoV), and severe acute respiratory syndrome coronavirus (SARS-CoV)
  publication-title: J. Biol. Chem
– volume: 78
  start-page: 5913
  year: 2004
  end-page: 5922
  ident: bib165
  article-title: Intracellular targeting signals contribute to localization of coronavirus spike proteins near the virus assembly site
  publication-title: J. Virol
– volume: 277
  start-page: 235
  year: 2000
  end-page: 249
  ident: bib174
  article-title: Identification of nucleocapsid binding sites within coronavirus-defective genomes
  publication-title: Virology
– volume: 395
  start-page: 1054
  year: 2020
  end-page: 1062
  ident: bib221
  article-title: Clinical course and risk factors for mortality of adult inpatients with COVID-19 in Wuhan, China: a retrospective cohort study
  publication-title: Lancet
– volume: 176
  start-page: 104742
  year: 2020
  ident: bib36
  article-title: The spike glycoprotein of the new coronavirus 2019-nCoV contains a furin-like cleavage site absent in CoV of the same clade
  publication-title: Antiviral Res
– volume: 79
  start-page: 2079
  year: 2005
  end-page: 2086
  ident: bib214
  article-title: Inhibition of β interferon induction by severe acute respiratory syndrome coronavirus suggests a two-step model for activation of interferon regulatory factor 3
  publication-title: J. Virol
– volume: 295
  start-page: 6785
  year: 2020
  end-page: 6797
  ident: bib142
  article-title: Remdesivir is a direct-acting antiviral that inhibits RNA-dependent RNA polymerase from severe acute respiratory syndrome coronavirus 2 with high potency
  publication-title: J. Biol. Chem
– volume: 922
  start-page: 1
  year: 2012
  end-page: 21
  ident: bib104
  article-title: Functions of single-strand DNA-binding proteins in DNA replication, recombination, and repair
  publication-title: Methods Mol. Biol
– volume: 24
  start-page: 490
  year: 2016
  end-page: 502
  ident: bib122
  article-title: Epidemiology, genetic recombination, and pathogenesis of coronaviruses
  publication-title: Trends Microbiol
– volume: 203
  start-page: 631
  year: 2004
  end-page: 637
  ident: bib9
  article-title: Tissue distribution of ACE2 protein, the functional receptor for SARS coronavirus: a first step in understanding SARS pathogenesis
  publication-title: J. Pathol
– volume: 6
  start-page: e19612
  year: 2011
  end-page: e19655
  ident: bib198
  article-title: Deep sequencing reveals direct targets of gammaherpesvirus-induced mRNA decay and suggests that multiple mechanisms govern cellular transcript escape
  publication-title: PLoS ONE
– volume: 56
  start-page: 919
  year: 2005
  end-page: 922
  ident: bib291
  article-title: Experience of using convalescent plasma for severe acute respiratory syndrome among healthcare workers in a Taiwan hospital
  publication-title: J. Antimicrob. Chemother
– volume: 93
  start-page: 275
  year: 2012
  end-page: 281
  ident: bib231
  article-title: Bat severe acute respiratory syndrome-like coronavirus ORF3b homologues display different interferon antagonist activities
  publication-title: J. Gen. Virol
– volume: 205
  start-page: 1601
  year: 2008
  end-page: 1610
  ident: bib227
  article-title: Length-dependent recognition of double-stranded ribonucleic acids by retinoic acid–inducible gene-I and melanoma differentiation–associated gene 5
  publication-title: J. Exp. Med
– volume: 9
  start-page: e1003565
  year: 2013
  ident: bib115
  article-title: Coronaviruses lacking exoribonuclease activity are susceptible to lethal mutagenesis: evidence for proofreading and potential therapeutics
  publication-title: PLoS Pathog
– volume: 30
  start-page: 343
  year: 2020
  end-page: 355
  ident: bib46
  article-title: Inhibition of SARS-CoV-2 (previously 2019-nCoV) infection by a highly potent pan-coronavirus fusion inhibitor targeting its spike protein that harbors a high capacity to mediate membrane fusion
  publication-title: Cell Res
– volume: 7
  start-page: e1002059
  year: 2011
  ident: bib131
  article-title: Crystal structure and functional analysis of the SARS-coronavirus RNA cap 2′-
  publication-title: PLoS Pathog
– volume: 11
  start-page: e01610
  year: 2020
  end-page: e01620
  ident: bib193
  article-title: Discovery and Genomic Characterization of a 382-Nucleotide Deletion in ORF7b and ORF8 during the Early Evolution of SARS-CoV-2
  publication-title: bioRxiv
– year: 2020
  ident: bib190
  article-title: SARS-CoV-2 is sensitive to type I interferon pretreatment
  publication-title: bioRxiv
– volume: 4
  start-page: a011254
  year: 2012
  ident: bib243
  article-title: MAP kinase pathways
  publication-title: Cold Spring Harb. Perspect. Biol
– volume: 122
  start-page: 20
  year: 2006
  end-page: 27
  ident: bib259
  article-title: Over-expression of severe acute respiratory syndrome coronavirus 3b protein induces both apoptosis and necrosis in Vero E6 cells
  publication-title: Virus Res
– volume: 106
  start-page: 3484
  year: 2009
  end-page: 3489
  ident: bib129
  article-title: Functional screen reveals SARS coronavirus nonstructural protein nsp14 as a novel cap N7 methyltransferase
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 16
  start-page: 462
  year: 2014
  end-page: 472
  ident: bib86
  article-title: Nucleocapsid phosphorylation and RNA helicase DDX1 recruitment enables coronavirus transition from discontinuous to continuous transcription
  publication-title: Cell Host Microbe
– volume: 265
  start-page: 57
  year: 2019
  end-page: 66
  ident: bib320
  article-title: PEDV nsp16 negatively regulates innate immunity to promote viral proliferation
  publication-title: Virus Res
– volume: 368
  start-page: 1274
  year: 2020
  end-page: 1278
  ident: bib45
  article-title: A noncompeting pair of human neutralizing antibodies block COVID-19 virus binding to its receptor ACE2
  publication-title: Science
– volume: 81
  start-page: 6346
  year: 2007
  end-page: 6355
  ident: bib273
  article-title: Induction of apoptosis by the severe acute respiratory syndrome coronavirus 7a protein is dependent on its interaction with the Bcl-XL protein
  publication-title: J. Virol
– volume: 11
  start-page: 972
  year: 2019
  ident: bib38
  article-title: The S2 subunit of QX-type infectious bronchitis coronavirus spike protein is an essential determinant of neurotropism
  publication-title: Viruses
– volume: 300
  start-page: 1399
  year: 2003
  end-page: 1404
  ident: bib183
  article-title: The genome sequence of the SARS-associated coronavirus
  publication-title: Science
– volume: 86
  start-page: 11128
  year: 2012
  end-page: 11137
  ident: bib197
  article-title: Severe acute respiratory syndrome coronavirus nsp1 facilitates efficient propagation in cells through a specific translational shutoff of host mRNA
  publication-title: J. Virol
– volume: 235
  start-page: 185
  year: 2015
  end-page: 195
  ident: bib212
  article-title: Molecular pathology of emerging coronavirus infections
  publication-title: J. Pathol
– volume: 87
  start-page: 12611
  year: 2013
  end-page: 12618
  ident: bib313
  article-title: Chimeric exchange of coronavirus nsp5 proteases (3CLpro) identifies common and divergent regulatory determinants of protease activity
  publication-title: J. Virol
– volume: 10
  start-page: e1004166
  year: 2014
  ident: bib151
  article-title: Targeting membrane-bound viral RNA synthesis reveals potent inhibition of diverse coronaviruses including the middle East respiratory syndrome virus
  publication-title: PLoS Pathog
– volume: 73
  start-page: 1907
  year: 2005
  end-page: 1916
  ident: bib257
  article-title: Apoptosis, pyroptosis, and necrosis: mechanistic description of dead and dying eukaryotic cells
  publication-title: Infect. Immun
– volume: 35
  start-page: e86
  year: 2020
  ident: bib282
  article-title: Viral load kinetics of SARS-CoV-2 infection in first two patients in Korea
  publication-title: J. Korean Med. Sci
– volume: 12
  start-page: 137
  year: 2011
  end-page: 143
  ident: bib132
  article-title: Ribose 2′-
  publication-title: Nat. Immunol
– volume: 88
  start-page: 913
  year: 2014
  end-page: 924
  ident: bib255
  article-title: Inhibition of NF-κB-mediated inflammation in severe acute respiratory syndrome coronavirus-infected mice increases survival
  publication-title: J. Virol
– volume: 10
  start-page: 2342
  year: 2019
  ident: bib92
  article-title: Structure of the SARS-CoV nsp12 polymerase bound to nsp7 and nsp8 co-factors
  publication-title: Nat. Commun
– volume: 181
  start-page: 281
  year: 2020
  end-page: 292.e6
  ident: bib35
  article-title: Structure, function, and antigenicity of the SARS-CoV-2 spike glycoprotein
  publication-title: Cell
– volume: 66
  start-page: 3522
  year: 1992
  end-page: 3530
  ident: bib170
  article-title: Identification and characterization of a coronavirus packaging signal
  publication-title: J. Virol
– volume: 73
  start-page: 6862
  year: 1999
  end-page: 6871
  ident: bib153
  article-title: The putative helicase of the coronavirus mouse hepatitis virus is processed from the replicase gene polyprotein and localizes in complexes that are active in viral RNA synthesis
  publication-title: J. Virol
– volume: 87
  start-page: 12552
  year: 2013
  end-page: 12561
  ident: bib19
  article-title: Middle East respiratory syndrome coronavirus infection mediated by the transmembrane serine protease TMPRSS2
  publication-title: J. Virol
– volume: 68
  start-page: 8131
  year: 1994
  end-page: 8140
  ident: bib133
  article-title: Identification of the cis-acting signal for minus-strand RNA synthesis of a murine coronavirus: implications for the role of minus-strand RNA in RNA replication and transcription
  publication-title: J. Virol
– volume: 18
  start-page: e3000715
  year: 2020
  ident: bib155
  article-title: A unifying structural and functional model of the coronavirus replication organelle: tracking down RNA synthesis
  publication-title: PLoS Biol
– volume: 80
  start-page: 2684
  year: 2006
  end-page: 2693
  ident: bib208
  article-title: Modeling the early events of severe acute respiratory syndrome coronavirus infection
  publication-title: J. Virol
– volume: 361
  start-page: 1773
  year: 2003
  end-page: 1778
  ident: bib218
  article-title: Lung pathology of fatal severe acute respiratory syndrome
  publication-title: Lancet
– volume: 387
  start-page: 402
  year: 2009
  end-page: 413
  ident: bib325
  article-title: The 8ab protein of SARS-CoV is a luminal ER membrane-associated protein and induces the activation of ATF6
  publication-title: Virology
– volume: 87
  start-page: 5502
  year: 2013
  end-page: 5511
  ident: bib18
  article-title: The spike protein of the emerging betacoronavirus EMC uses a novel coronavirus receptor for entry, can be activated by TMPRSS2, and is targeted by neutralizing antibodies
  publication-title: J. Virol
– volume: 104
  start-page: 12123
  year: 2007
  end-page: 12128
  ident: bib285
  article-title: Potent cross-reactive neutralization of SARS coronavirus isolates by human monoclonal antibodies
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 19
  start-page: 181
  year: 2016
  end-page: 193
  ident: bib209
  article-title: Dysregulated type I interferon and inflammatory monocyte-macrophage responses cause lethal pneumonia in SARS-CoV-infected mice
  publication-title: Cell Host Microbe
– volume: 478
  start-page: 75
  year: 2015
  end-page: 85
  ident: bib164
  article-title: Coronavirus envelope (E) protein remains at the site of assembly
  publication-title: Virology
– volume: 77
  start-page: 2922
  year: 2003
  end-page: 2927
  ident: bib175
  article-title: Nucleocapsid-independent specific viral RNA packaging via viral envelope protein and viral RNA signal
  publication-title: J. Virol
– volume: 81
  start-page: 12135
  year: 2007
  end-page: 12144
  ident: bib113
  article-title: High fidelity of murine hepatitis virus replication is decreased in nsp14 exoribonuclease mutants
  publication-title: J. Virol
– volume: 7
  start-page: e1002433
  year: 2011
  ident: bib81
  article-title: SARS coronavirus nsp1 protein induces template-dependent endonucleolytic cleavage of mRNAs: viral mRNAs are resistant to nsp1-induced RNA cleavage
  publication-title: PLoS Pathog
– volume: 3
  start-page: e109
  year: 2007
  ident: bib235
  article-title: Coronavirus non-structural protein 1 is a major pathogenicity factor: implications for the rational design of coronavirus vaccines
  publication-title: PLoS Pathog
– volume: 7
  start-page: e1002315
  year: 2011
  ident: bib269
  article-title: Severe acute respiratory syndrome coronavirus envelope protein regulates cell stress response and apoptosis
  publication-title: PLoS Pathog
– volume: 9
  start-page: e1003760
  year: 2013
  ident: bib111
  article-title: Coronaviruses as DNA wannabes: a new model for the regulation of RNA virus replication fidelity
  publication-title: PLoS Pathog
– volume: 78
  start-page: 6723
  year: 2004
  end-page: 6734
  ident: bib272
  article-title: A novel severe acute respiratory syndrome coronavirus protein, U274, is transported to the cell surface and undergoes endocytosis
  publication-title: J. Virol
– volume: 89
  start-page: 2080
  year: 2015
  end-page: 2089
  ident: bib312
  article-title: Mutations across murine hepatitis virus nsp4 alter virus fitness and membrane modifications
  publication-title: J. Virol
– volume: 9
  start-page: 1392
  year: 2002
  end-page: 1395
  ident: bib263
  article-title: detection of apoptosis in monocytes/macrophages infected with human coronavirus
  publication-title: Clin. Diagn. Lab. Immunol
– volume: 114
  start-page: E4251
  year: 2017
  end-page: E4260
  ident: bib317
  article-title: Coronavirus nonstructural protein 15 mediates evasion of dsRNA sensors and limits apoptosis in macrophages
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 24
  start-page: 44
  year: 2005
  end-page: 46
  ident: bib289
  article-title: Use of convalescent plasma therapy in SARS patients in Hong Kong
  publication-title: Eur. J. Clin. Microbiol. Infect. Dis
– volume: 133
  start-page: 136
  year: 2008
  end-page: 148
  ident: bib297
  article-title: The SARS-coronavirus PLnc domain of nsp3 as a replication/transcription scaffolding protein
  publication-title: Virus Res
– volume: 56
  start-page: 912
  year: 1985
  end-page: 920
  ident: bib14
  article-title: Proteolytic cleavage of the E2-glycoprotein of murine coronavirus: host-dependent differences in proteolytic cleavage and cell-fusion
  publication-title: J. Virol
– volume: 89
  start-page: 6418
  year: 2015
  end-page: 6426
  ident: bib117
  article-title: Mutations in coronavirus nonstructural protein 10 decrease virus replication fidelity
  publication-title: J. Virol
– volume: 11
  start-page: 1620
  year: 2020
  ident: bib43
  article-title: Characterization of spike glycoprotein of SARS-CoV-2 on virus entry and its immune cross-reactivity with SARS-CoV
  publication-title: Nat. Commun
– volume: 75
  start-page: 4439
  year: 2001
  end-page: 4443
  ident: bib42
  article-title: Generation of a highly pathogenic avian influenza A virus from an avirulent field isolate by passaging in chickens
  publication-title: J. Virol
– volume: 218
  start-page: 52
  year: 1996
  end-page: 60
  ident: bib156
  article-title: The production of recombinant infectious DI-particles of a murine coronavirus in the absence of helper virus
  publication-title: Virology
– volume: 10
  start-page: 1426
  year: 2014
  end-page: 1441
  ident: bib315
  article-title: Coronavirus NSP6 restricts autophagosome expansion
  publication-title: Autophagy
– volume: 71
  start-page: 9278
  year: 1997
  end-page: 9284
  ident: bib161
  article-title: Protein interactions during coronavirus assembly
  publication-title: J. Virol
– volume: 83
  start-page: 12998
  year: 2009
  end-page: 13008
  ident: bib310
  article-title: Nuclear magnetic resonance structure of the nucleic acid-binding domain of severe acute respiratory syndrome coronavirus nonstructural protein 3
  publication-title: J. Virol
– volume: 517
  start-page: 38
  year: 2018
  end-page: 43
  ident: bib80
  article-title: New insights about the regulation of Nidovirus subgenomic mRNA synthesis
  publication-title: Virology
– volume: 81
  start-page: 1701
  year: 2007
  end-page: 1713
  ident: bib302
  article-title: A severe acute respiratory syndrome coronavirus that lacks the E gene is attenuated
  publication-title: J. Virol
– volume: 87
  start-page: 8124
  year: 2013
  end-page: 8134
  ident: bib270
  article-title: Upregulation of CHOP/GADD153 during coronavirus infectious bronchitis virus infection modulates apoptosis by restricting activation of the extracellular signal-regulated kinase pathway
  publication-title: J. Virol
– volume: 113
  start-page: 12262
  year: 2016
  end-page: 12267
  ident: bib28
  article-title: Proteolytic processing of Middle East respiratory syndrome coronavirus spikes expands virus tropism
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 20
  start-page: 411
  year: 2020
  end-page: 412
  ident: bib281
  article-title: Viral load of SARS-CoV-2 in clinical samples
  publication-title: Lancet Infect. Dis
– volume: 81
  start-page: 11054
  year: 2007
  end-page: 11068
  ident: bib274
  article-title: Severe acute respiratory syndrome coronavirus gene 7 products contribute to virus-induced apoptosis
  publication-title: J. Virol
– volume: 9
  start-page: 382
  year: 2020
  end-page: 385
  ident: bib287
  article-title: Potent binding of 2019 novel coronavirus spike protein by a SARS coronavirus-specific human monoclonal antibody
  publication-title: Emerg. Microbes Infect
– volume: 81
  start-page: 853
  year: 2000
  end-page: 879
  ident: bib59
  article-title: Virus-encoded proteinases and proteolytic processing in the Nidovirales
  publication-title: J. Gen. Virol
– volume: 22
  start-page: 420
  year: 2017
  ident: bib121
  article-title: RNA recombination enhances adaptability and is required for virus spread and virulence
  publication-title: Cell Host Microbe
– volume: 30
  start-page: 269
  year: 2020
  end-page: 271
  ident: bib30
  article-title: Remdesivir and chloroquine effectively inhibit the recently emerged novel coronavirus (2019-nCoV)
  publication-title: Cell Res
– volume: 84
  start-page: 2169
  year: 2010
  end-page: 2175
  ident: bib88
  article-title: Coronavirus nucleocapsid protein facilitates template switching and is required for efficient transcription
  publication-title: J. Virol
– volume: 40
  start-page: 1737
  year: 2012
  end-page: 1747
  ident: bib98
  article-title: The SARS-coronavirus nsp7+nsp8 complex is a unique multimeric RNA polymerase capable of both
  publication-title: Nucleic Acids Res
– volume: 311
  start-page: 16
  year: 2003
  end-page: 27
  ident: bib180
  article-title: Emergence of a coronavirus infectious bronchitis virus mutant with a truncated 3b gene: functional characterization of the 3b protein in pathogenesis and replication
  publication-title: Virology
– volume: 82
  start-page: 3882
  year: 2008
  end-page: 3893
  ident: bib83
  article-title: Identification of a coronavirus transcription enhancer
  publication-title: J. Virol
– volume: 86
  start-page: 10173
  year: 2012
  end-page: 10185
  ident: bib127
  article-title: Signatures of host mRNA 5′ terminus for efficient hantavirus cap snatching
  publication-title: J. Virol
– volume: 174
  start-page: 11
  year: 2011
  end-page: 22
  ident: bib304
  article-title: A structural analysis of M protein in coronavirus assembly and morphology
  publication-title: J. Struct. Biol
– volume: 8
  start-page: 25
  year: 2019
  ident: bib154
  article-title: Determination of host proteins composing the microenvironment of coronavirus replicase complexes by proximity-labeling
  publication-title: Elife
– volume: 93
  start-page: e00291
  year: 2019
  ident: bib99
  article-title: Identification and characterization of a human coronavirus 229E nonstructural protein 8-associated RNA 3′-terminal adenylyltransferase activity
  publication-title: J. Virol
– volume: 86
  start-page: 1423
  year: 2005
  end-page: 1434
  ident: bib305
  article-title: Differential maturation and subcellular localization of severe acute respiratory syndrome coronavirus surface proteins S, M and E
  publication-title: J. Gen. Virol
– volume: 479–480
  start-page: 600
  year: 2015
  end-page: 608
  ident: bib194
  article-title: Emerging roles for RNA degradation in viral replication and antiviral defense
  publication-title: Virology
– volume: 41
  start-page: 557
  year: 1982
  end-page: 565
  ident: bib75
  article-title: Further characterization of mRNA's of mouse hepatitis virus: presence of common 5-”end nucleotides
  publication-title: J. Virol
– volume: 15
  start-page: 2020
  year: 1996
  end-page: 2028
  ident: bib157
  article-title: Nucleocapsid-independent assembly of coronavirus-like particles by co-expression of viral envelope protein genes
  publication-title: EMBO J
– volume: 580
  start-page: 3643
  year: 2006
  end-page: 3648
  ident: bib326
  article-title: Expression and functional characterization of the putative protein 8b of the severe acute respiratory syndrome-associated coronavirus
  publication-title: FEBS Lett
– volume: 4
  start-page: e1000054
  year: 2008
  ident: bib152
  article-title: SARS-coronavirus replication/transcription complexes are membrane-protected and need a host factor for activity
  publication-title: PLoS Pathog
– volume: 1102
  start-page: 26
  year: 2007
  end-page: 38
  ident: bib191
  article-title: The molecular biology of SARS coronavirus
  publication-title: Ann. N. Y. Acad. Sci
– volume: 494
  start-page: 491
  year: 2001
  end-page: 497
  ident: bib71
  article-title: Mouse hepatitis virus minus-strand templates are unstable and turnover during viral replication
  publication-title: Adv. Exp. Med. Biol
– volume: 41
  start-page: 212
  year: 2011
  end-page: 222
  ident: bib219
  article-title: Coagulation and autoimmunity in scleroderma interstitial lung disease
  publication-title: Semin. Arthritis Rheum
– volume: 76
  start-page: 3697
  year: 2002
  end-page: 3708
  ident: bib147
  article-title: RNA replication of mouse hepatitis virus takes place at double-membrane vesicles
  publication-title: J. Virol
– volume: 170
  start-page: 1136
  year: 2007
  end-page: 1147
  ident: bib262
  article-title: Pathology and pathogenesis of severe acute respiratory syndrome
  publication-title: Am. J. Pathol
– volume: 579
  start-page: 270
  year: 2020
  end-page: 273
  ident: bib7
  article-title: A pneumonia outbreak associated with a new coronavirus of probable bat origin
  publication-title: Nature
– volume: 78
  start-page: 6048
  year: 2004
  end-page: 6054
  ident: bib15
  article-title: Cleavage inhibition of the murine coronavirus spike protein by a furin-like enzyme affects cell-cell but not virus-cell fusion
  publication-title: J. Virol
– volume: 91
  start-page: 1
  year: 2011
  end-page: 10
  ident: bib57
  article-title: Interference of ribosomal frameshifting by antisense peptide nucleic acids suppresses SARS coronavirus replication
  publication-title: Antiviral Res
– volume: 464
  start-page: 439
  year: 2014
  end-page: 447
  ident: bib268
  article-title: The SARS-coronavirus membrane protein induces apoptosis via interfering with PDK1-PKB/Akt signalling
  publication-title: Biochem. J
– volume: 85
  start-page: 873
  year: 2011
  end-page: 882
  ident: bib12
  article-title: A transmembrane serine protease is linked to the severe acute respiratory syndrome coronavirus receptor and activates virus entry
  publication-title: J. Virol
– volume: 12
  start-page: 341
  year: 2004
  end-page: 353
  ident: bib102
  article-title: The nsp9 replicase protein of SARS-coronavirus, structure and functional insights
  publication-title: Structure
– volume: 78
  start-page: 7833
  year: 2004
  end-page: 7838
  ident: bib128
  article-title: Human coronavirus 229E nonstructural protein 13: characterization of duplex-unwinding, nucleoside triphosphatase, and RNA 5′-triphosphatase activities
  publication-title: J. Virol
– volume: 101
  start-page: 122
  year: 2014
  end-page: 130
  ident: bib138
  article-title: SARS-CoV ORF1b-encoded nonstructural proteins 12-16: replicative enzymes as antiviral targets
  publication-title: Antiviral Res
– volume: 35
  start-page: 57
  year: 2019
  end-page: 62
  ident: bib139
  article-title: Nucleoside analogues for the treatment of coronavirus infections
  publication-title: Curr. Opin. Virol
– volume: 133
  start-page: 10094
  year: 2011
  end-page: 10100
  ident: bib56
  article-title: Identification of RNA pseudoknot-binding ligand that inhibits the −1 ribosomal frameshifting of SARS-coronavirus by structure-based virtual screening
  publication-title: J. Am. Chem. Soc
– volume: 114
  start-page: E8895
  year: 2017
  end-page: E8904
  ident: bib82
  article-title: Expanded subgenomic mRNA transcriptome and coding capacity of a nidovirus
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 537
  start-page: 198
  year: 2019
  end-page: 207
  ident: bib172
  article-title: Coronavirus genomic RNA packaging
  publication-title: Virology
– volume: 88
  start-page: 7070
  year: 2014
  end-page: 7082
  ident: bib2
  article-title: Identification of diverse alphacoronaviruses and genomic characterization of a novel severe acute respiratory syndrome-like coronavirus from bats in China
  publication-title: J. Virol
– volume: 94
  start-page: e01719
  year: 2020
  end-page: e01774
  ident: bib40
  article-title: Trypsin treatment unlocks barrier for zoonotic bat coronavirus infection
  publication-title: J. Virol
– volume: 383
  start-page: 13
  year: 2004
  end-page: 18
  ident: bib254
  article-title: The SARS coronavirus nucleocapsid protein induces actin reorganization and apoptosis in COS-1 cells in the absence of growth factors
  publication-title: Biochem. J
– volume: 181
  start-page: 271
  year: 2020
  end-page: 280.e8
  ident: bib6
  article-title: SARS-CoV-2 cell entry depends on ACE2 and TMPRSS2 and is blocked by a clinically proven protease inhibitor
  publication-title: Cell
– volume: 84
  start-page: 280
  year: 2010
  end-page: 290
  ident: bib311
  article-title: Murine hepatitis virus nonstructural protein 4 regulates virus-induced membrane modifications and replication complex function
  publication-title: J. Virol
– volume: 93
  start-page: e00319
  year: 2019
  end-page: e00373
  ident: bib199
  article-title: C19ORF66 broadly escapes virus-induced endonuclease cleavage and restricts Kaposi's sarcoma-associated herpesvirus
  publication-title: J. Virol
– volume: 81
  start-page: 10758
  year: 2007
  end-page: 10768
  ident: bib23
  article-title: Role of endocytosis and low pH in murine hepatitis virus strain A59 cell entry
  publication-title: J. Virol
– volume: 84
  start-page: 4330
  year: 2010
  end-page: 4340
  ident: bib54
  article-title: Achieving a golden mean: mechanisms by which coronaviruses ensure synthesis of the correct stoichiometric ratios of viral proteins
  publication-title: J. Virol
– volume: 10
  start-page: e1004320
  year: 2014
  ident: bib253
  article-title: The PDZ-binding motif of severe acute respiratory syndrome coronavirus envelope protein is a determinant of viral pathogenesis
  publication-title: PLoS Pathog
– volume: 13
  start-page: 461
  year: 2015
  end-page: 469
  ident: bib261
  article-title: Viral apoptotic mimicry
  publication-title: Nat. Rev. Microbiol
– volume: 81
  start-page: 2418
  year: 2007
  end-page: 2428
  ident: bib167
  article-title: The cytoplasmic tail of the severe acute respiratory syndrome coronavirus spike protein contains a novel endoplasmic reticulum retrieval signal that binds COPI and promotes interaction with membrane protein
  publication-title: J. Virol
– volume: 23
  start-page: 986
  year: 2013
  end-page: 993
  ident: bib17
  article-title: Structure of MERS-CoV spike receptor-binding domain complexed with human receptor DPP4
  publication-title: Cell Res
– volume: 81
  start-page: 11620
  year: 2007
  end-page: 11633
  ident: bib201
  article-title: Severe acute respiratory syndrome coronavirus evades antiviral signaling: role of nsp1 and rational design of an attenuated strain
  publication-title: J. Virol
– volume: 13
  start-page: 751
  year: 2006
  end-page: 752
  ident: bib300
  article-title: Architecture of the SARS coronavirus prefusion spike
  publication-title: Nat. Struct. Mol. Biol
– volume: 109
  start-page: 9372
  year: 2012
  end-page: 9377
  ident: bib116
  article-title: RNA 3′-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10/nsp14 exoribonuclease complex
  publication-title: Proc. Natl. Acad. Sci. U.S.A
– volume: 149
  start-page: 58
  year: 2018
  end-page: 74
  ident: bib309
  article-title: Nsp3 of coronaviruses: structures and functions of a large multi-domain protein
  publication-title: Antiviral Res
– volume: 50
  start-page: 5419
  year: 2011
  end-page: 5425
  ident: bib249
  article-title: SARS-CoV accessory protein 3b induces AP-1 transcriptional activity through activation of JNK and ERK pathways
  publication-title: Biochemistry
– volume: 4
  start-page: e00513
  year: 2013
  end-page: e00524
  ident: bib67
  article-title: Severe acute respiratory syndrome coronavirus nonstructural proteins 3, 4, and 6 induce double-membrane vesicles
  publication-title: mBio
– volume: 80
  start-page: 5927
  year: 2006
  end-page: 5940
  ident: bib149
  article-title: Ultrastructure and origin of membrane vesicles associated with the severe acute respiratory syndrome coronavirus replication complex
  publication-title: J. Virol
– volume: 295
  start-page: 4773
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib141
  article-title: The antiviral compound remdesivir potently inhibits RNA-dependent RNA polymerase from Middle East respiratory syndrome coronavirus
  publication-title: J. Biol. Chem
  doi: 10.1074/jbc.AC120.013056
– volume: 6
  start-page: e1000863
  year: 2010
  ident: 10.1074/jbc.REV120.013930_bib130
  article-title: In vitro reconstitution of SARS-coronavirus mRNA cap methylation
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1000863
– volume: 35
  start-page: e86
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib282
  article-title: Viral load kinetics of SARS-CoV-2 infection in first two patients in Korea
  publication-title: J. Korean Med. Sci
  doi: 10.3346/jkms.2020.35.e86
– volume: 91
  start-page: 14
  year: 2017
  ident: 10.1074/jbc.REV120.013930_bib314
  article-title: Porcine deltacoronavirus nsp5 antagonizes type I interferon signaling by cleaving STAT2
  publication-title: J. Virol
  doi: 10.1128/JVI.00003-17
– volume: 117
  start-page: 11727
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib29
  article-title: Cell entry mechanisms of SARS-CoV-2
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.2003138117
– volume: 10
  start-page: 290
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib224
  article-title: Pegylated interferon-α protects type 1 pneumocytes against SARS coronavirus infection in macaques
  publication-title: Nat. Med
  doi: 10.1038/nm1001
– volume: 16
  start-page: 462
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib86
  article-title: Nucleocapsid phosphorylation and RNA helicase DDX1 recruitment enables coronavirus transition from discontinuous to continuous transcription
  publication-title: Cell Host Microbe
  doi: 10.1016/j.chom.2014.09.009
– volume: 84
  start-page: 12658
  year: 2010
  ident: 10.1074/jbc.REV120.013930_bib11
  article-title: Efficient activation of the severe acute respiratory syndrome coronavirus spike protein by the transmembrane protease TMPRSS2
  publication-title: J. Virol
  doi: 10.1128/JVI.01542-10
– volume: 57
  start-page: 328
  year: 1986
  ident: 10.1074/jbc.REV120.013930_bib89
  article-title: Coronavirus minus-strand RNA synthesis and effect of cycloheximide on coronavirus RNA synthesis
  publication-title: J. Virol
  doi: 10.1128/jvi.57.1.328-334.1986
– volume: 81
  start-page: 11054
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib274
  article-title: Severe acute respiratory syndrome coronavirus gene 7 products contribute to virus-induced apoptosis
  publication-title: J. Virol
  doi: 10.1128/JVI.01266-07
– volume: 114
  start-page: E8895
  year: 2017
  ident: 10.1074/jbc.REV120.013930_bib82
  article-title: Expanded subgenomic mRNA transcriptome and coding capacity of a nidovirus
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.1706696114
– volume: 78
  start-page: 5913
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib165
  article-title: Intracellular targeting signals contribute to localization of coronavirus spike proteins near the virus assembly site
  publication-title: J. Virol
  doi: 10.1128/JVI.78.11.5913-5922.2004
– year: 2020
  ident: 10.1074/jbc.REV120.013930_bib190
  article-title: SARS-CoV-2 is sensitive to type I interferon pretreatment
  publication-title: bioRxiv
– volume: 4
  start-page: 280
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib247
  article-title: Pleiotropic effects of interleukin-6 in a “two-hit” murine model of acute respiratory distress syndrome
  publication-title: Pulm. Circ
  doi: 10.1086/675991
– volume: 94
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib32
  article-title: Receptor recognition by the novel coronavirus from Wuhan: an analysis based on decade-long structural studies of SARS coronavirus
  publication-title: J. Virol
  doi: 10.1128/JVI.00127-20
– volume: 81
  start-page: 1701
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib302
  article-title: A severe acute respiratory syndrome coronavirus that lacks the E gene is attenuated in vitro in vivo
  publication-title: J. Virol
  doi: 10.1128/JVI.01467-06
– volume: 87
  start-page: 1953
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib207
  article-title: Interaction of severe acute respiratory syndrome-associated coronavirus with dendritic cells
  publication-title: J. Gen. Virol
  doi: 10.1099/vir.0.81624-0
– volume: 150
  start-page: 123
  year: 2018
  ident: 10.1074/jbc.REV120.013930_bib135
  article-title: Broad-spectrum antiviral activity of the eIF4A inhibitor silvestrol against corona- and picornaviruses
  publication-title: Antiviral Res
  doi: 10.1016/j.antiviral.2017.12.010
– volume: 20
  start-page: 411
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib281
  article-title: Viral load of SARS-CoV-2 in clinical samples
  publication-title: Lancet Infect. Dis
  doi: 10.1016/S1473-3099(20)30113-4
– volume: 458-459
  start-page: 125
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib69
  article-title: Membrane rearrangements mediated by coronavirus nonstructural proteins 3 and 4
  publication-title: Virology
  doi: 10.1016/j.virol.2014.04.027
– volume: 83
  start-page: 3007
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib103
  article-title: Severe acute respiratory syndrome coronavirus nsp9 dimerization is essential for efficient viral growth
  publication-title: J. Virol
  doi: 10.1128/JVI.01505-08
– volume: 81
  start-page: 6771
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib171
  article-title: New structure model for the packaging signal in the genome of group IIa coronaviruses
  publication-title: J. Virol
  doi: 10.1128/JVI.02231-06
– volume: 79
  start-page: 2079
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib214
  article-title: Inhibition of β interferon induction by severe acute respiratory syndrome coronavirus suggests a two-step model for activation of interferon regulatory factor 3
  publication-title: J. Virol
  doi: 10.1128/JVI.79.4.2079-2086.2005
– volume: 27
  start-page: 992
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib246
  article-title: Complex immune dysregulation in COVID-19 patients with severe respiratory failure
  publication-title: Cell Host Microbe
  doi: 10.1016/j.chom.2020.04.009
– volume: 28
  start-page: 19
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib41
  article-title: History of highly pathogenic avian influenza
  publication-title: Rev. Sci. Tech
  doi: 10.20506/rst.28.1.1856
– volume: 157
  start-page: 2095
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib95
  article-title: Biochemical characterization of a recombinant SARS coronavirus nsp12 RNA-dependent RNA polymerase capable of copying viral RNA templates
  publication-title: Arch. Virol
  doi: 10.1007/s00705-012-1404-x
– volume: 88
  start-page: 913
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib255
  article-title: Inhibition of NF-κB-mediated inflammation in severe acute respiratory syndrome coronavirus-infected mice increases survival
  publication-title: J. Virol
  doi: 10.1128/JVI.02576-13
– volume: 87
  start-page: 8124
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib270
  article-title: Upregulation of CHOP/GADD153 during coronavirus infectious bronchitis virus infection modulates apoptosis by restricting activation of the extracellular signal-regulated kinase pathway
  publication-title: J. Virol
  doi: 10.1128/JVI.00626-13
– volume: 464
  start-page: 439
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib268
  article-title: The SARS-coronavirus membrane protein induces apoptosis via interfering with PDK1-PKB/Akt signalling
  publication-title: Biochem. J
  doi: 10.1042/BJ20131461
– volume: 30
  start-page: 269
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib30
  article-title: Remdesivir and chloroquine effectively inhibit the recently emerged novel coronavirus (2019-nCoV) in vitro
  publication-title: Cell Res
  doi: 10.1038/s41422-020-0282-0
– volume: 79
  start-page: 6620
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib85
  article-title: Selective replication of coronavirus genomes that express nucleocapsid protein
  publication-title: J. Virol
  doi: 10.1128/JVI.79.11.6620-6630.2005
– volume: 277
  start-page: 235
  year: 2000
  ident: 10.1074/jbc.REV120.013930_bib174
  article-title: Identification of nucleocapsid binding sites within coronavirus-defective genomes
  publication-title: Virology
  doi: 10.1006/viro.2000.0611
– volume: 24
  start-page: 490
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib122
  article-title: Epidemiology, genetic recombination, and pathogenesis of coronaviruses
  publication-title: Trends Microbiol
  doi: 10.1016/j.tim.2016.03.003
– volume: 287
  start-page: 31
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib70
  article-title: Coronavirus transcription: a perspective
  publication-title: Curr. Top. Microbiol. Immunol
– volume: 81
  start-page: 20
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib79
  article-title: A contemporary view of coronavirus transcription
  publication-title: J. Virol
  doi: 10.1128/JVI.01358-06
– volume: 282
  start-page: 32208
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib230
  article-title: Regulation of IRF-3-dependent innate immunity by the papain-like protease domain of the severe acute respiratory syndrome coronavirus
  publication-title: J. Biol. Chem
  doi: 10.1074/jbc.M704870200
– volume: 4
  start-page: e00513
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib67
  article-title: Severe acute respiratory syndrome coronavirus nonstructural proteins 3, 4, and 6 induce double-membrane vesicles
  publication-title: mBio
  doi: 10.1128/mBio.00524-13
– volume: 81
  start-page: 813
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib213
  article-title: Lethal infection of K18-hACE2 mice infected with severe acute respiratory syndrome coronavirus
  publication-title: J. Virol
  doi: 10.1128/JVI.02012-06
– volume: 186
  start-page: 7264
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib292
  article-title: Lack of peripheral memory B cell responses in recovered patients with severe acute respiratory syndrome: a six-year follow-up study
  publication-title: J. Immunol
  doi: 10.4049/jimmunol.0903490
– volume: 81
  start-page: 10758
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib23
  article-title: Role of endocytosis and low pH in murine hepatitis virus strain A59 cell entry
  publication-title: J. Virol
  doi: 10.1128/JVI.00725-07
– volume: 109
  start-page: 97
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib186
  article-title: Accessory proteins of SARS-CoV and other coronaviruses
  publication-title: Antiviral Res
  doi: 10.1016/j.antiviral.2014.06.013
– volume: 117
  start-page: 17
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib49
  article-title: Nidovirales: evolving the largest RNA virus genome
  publication-title: Virus Res
  doi: 10.1016/j.virusres.2006.01.017
– volume: 2
  start-page: 265
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib76
  article-title: Continuous and discontinuous RNA synthesis in coronaviruses
  publication-title: Annu. Rev. Virol
  doi: 10.1146/annurev-virology-100114-055218
– volume: 10
  start-page: e1004166
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib151
  article-title: Targeting membrane-bound viral RNA synthesis reveals potent inhibition of diverse coronaviruses including the middle East respiratory syndrome virus
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1004166
– volume: 79
  start-page: 2506
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib77
  article-title: Role of nucleotides immediately flanking the transcription-regulating sequence core in coronavirus subgenomic mRNA synthesis
  publication-title: J. Virol
  doi: 10.1128/JVI.79.4.2506-2516.2005
– volume: 395
  start-page: 497
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib220
  article-title: Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China
  publication-title: Lancet
  doi: 10.1016/S0140-6736(20)30183-5
– volume: 21
  start-page: 2076
  year: 2002
  ident: 10.1074/jbc.REV120.013930_bib21
  article-title: Crystal structure of murine sCEACAM1a[1,4]: a coronavirus receptor in the CEA family
  publication-title: EMBO J
  doi: 10.1093/emboj/21.9.2076
– volume: 583
  start-page: 459
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib137
  article-title: A SARS-CoV-2 protein interaction map reveals targets for drug repurposing
  publication-title: Nature
  doi: 10.1038/s41586-020-2286-9
– volume: 6
  start-page: e226
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib66
  article-title: SARS-coronavirus replication is supported by a reticulovesicular network of modified endoplasmic reticulum
  publication-title: PLoS Biol
  doi: 10.1371/journal.pbio.0060226
– volume: 83
  start-page: 3743
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib238
  article-title: Organ-specific attenuation of murine hepatitis virus strain A59 by replacement of catalytic residues in the putative viral cyclic phosphodiesterase ns2
  publication-title: J. Virol
  doi: 10.1128/JVI.02203-08
– volume: 101
  start-page: 3792
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib101
  article-title: The severe acute respiratory syndrome-coronavirus replicative protein nsp9 is a single-stranded RNA-binding subunit unique in the RNA virus world
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.0307877101
– volume: 13
  start-page: e1006474
  year: 2017
  ident: 10.1074/jbc.REV120.013930_bib109
  article-title: Crystal structure of Middle East respiratory syndrome coronavirus helicase
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1006474
– volume: 35
  start-page: 57
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib139
  article-title: Nucleoside analogues for the treatment of coronavirus infections
  publication-title: Curr. Opin. Virol
  doi: 10.1016/j.coviro.2019.04.002
– volume: 18
  start-page: e3000715
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib155
  article-title: A unifying structural and functional model of the coronavirus replication organelle: tracking down RNA synthesis
  publication-title: PLoS Biol
  doi: 10.1371/journal.pbio.3000715
– volume: 4
  start-page: a011254
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib243
  article-title: MAP kinase pathways
  publication-title: Cold Spring Harb. Perspect. Biol
  doi: 10.1101/cshperspect.a011254
– volume: 133
  start-page: 136
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib297
  article-title: The SARS-coronavirus PLnc domain of nsp3 as a replication/transcription scaffolding protein
  publication-title: Virus Res
  doi: 10.1016/j.virusres.2007.11.017
– volume: 39
  start-page: 1071
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib245
  article-title: Temporal relationship of viral load, ribavirin, interleukin (IL)-6, IL-8, and clinical progression in patients with severe acute respiratory syndrome
  publication-title: Clin. Infect. Dis
  doi: 10.1086/423808
– volume: 26
  start-page: 453
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib278
  article-title: Breadth of concomitant immune responses prior to patient recovery: a case report of non-severe COVID-19
  publication-title: Nat. Med
  doi: 10.1038/s41591-020-0819-2
– volume: 86
  start-page: 1423
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib305
  article-title: Differential maturation and subcellular localization of severe acute respiratory syndrome coronavirus surface proteins S, M and E
  publication-title: J. Gen. Virol
  doi: 10.1099/vir.0.80671-0
– volume: 368
  start-page: 409
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib60
  article-title: Crystal structure of SARS-CoV-2 main protease provides a basis for design of improved α-ketoamide inhibitors
  publication-title: Science
  doi: 10.1126/science.abb3405
– volume: 7
  start-page: e36521
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib105
  article-title: Mechanism of nucleic acid unwinding by SARS-CoV helicase
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0036521
– volume: 368
  start-page: 1274
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib45
  article-title: A noncompeting pair of human neutralizing antibodies block COVID-19 virus binding to its receptor ACE2
  publication-title: Science
  doi: 10.1126/science.abc2241
– volume: 18
  start-page: 290
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib25
  article-title: SARS coronavirus entry into host cells through a novel clathrin- and caveolae-independent endocytic pathway
  publication-title: Cell Res
  doi: 10.1038/cr.2008.15
– volume: 300
  start-page: 1394
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib184
  article-title: Characterization of a novel coronavirus associated with severe acute respiratory syndrome
  publication-title: Science
  doi: 10.1126/science.1085952
– volume: 56
  start-page: 912
  year: 1985
  ident: 10.1074/jbc.REV120.013930_bib14
  article-title: Proteolytic cleavage of the E2-glycoprotein of murine coronavirus: host-dependent differences in proteolytic cleavage and cell-fusion
  publication-title: J. Virol
  doi: 10.1128/jvi.56.3.912-920.1985
– volume: 15
  start-page: 2020
  year: 1996
  ident: 10.1074/jbc.REV120.013930_bib157
  article-title: Nucleocapsid-independent assembly of coronavirus-like particles by co-expression of viral envelope protein genes
  publication-title: EMBO J
  doi: 10.1002/j.1460-2075.1996.tb00553.x
– volume: 7
  start-page: 1040
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib211
  article-title: Epidemiological and clinical features of human coronavirus infections among different subsets of patients
  publication-title: Influenza Other Respir. Viruses
  doi: 10.1111/irv.12101
– volume: 7
  start-page: e1002294
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib319
  article-title: Biochemical and structural insights into the mechanisms of SARS coronavirus RNA ribose 2′-O-methylation by nsp16/nsp10 protein complex
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1002294
– volume: 190
  start-page: 1119
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib279
  article-title: Neutralizing antibodies in patients with severe acute respiratory syndrome-associated coronavirus infection
  publication-title: J. Infect. Dis
  doi: 10.1086/423286
– volume: 12
  start-page: 137
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib132
  article-title: Ribose 2′-O-methylation provides a molecular signature for the distinction of self and non-self mRNA dependent on the RNA sensor Mda5
  publication-title: Nat. Immunol
  doi: 10.1038/ni.1979
– volume: 93
  start-page: e01319
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib144
  article-title: Small-molecule antiviral β-d-N4-hydroxycytidine inhibits a proofreading-intact coronavirus with a high genetic barrier to resistance
  publication-title: J. Virol
  doi: 10.1128/JVI.01348-19
– volume: 83
  start-page: 6631
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib321
  article-title: Molecular determinants for subcellular localization of the severe acute respiratory syndrome coronavirus open reading frame 3b protein
  publication-title: J. Virol
  doi: 10.1128/JVI.00367-09
– volume: 117
  start-page: 8094
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib241
  article-title: Coronavirus endoribonuclease targets viral polyuridine sequences to evade activating host sensors
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.1921485117
– volume: 9
  start-page: 382
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib287
  article-title: Potent binding of 2019 novel coronavirus spike protein by a SARS coronavirus-specific human monoclonal antibody
  publication-title: Emerg. Microbes Infect
  doi: 10.1080/22221751.2020.1729069
– volume: 579
  start-page: 270
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib7
  article-title: A pneumonia outbreak associated with a new coronavirus of probable bat origin
  publication-title: Nature
  doi: 10.1038/s41586-020-2012-7
– volume: 11
  start-page: 972
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib38
  article-title: The S2 subunit of QX-type infectious bronchitis coronavirus spike protein is an essential determinant of neurotropism
  publication-title: Viruses
  doi: 10.3390/v11100972
– volume: 84
  start-page: 4330
  year: 2010
  ident: 10.1074/jbc.REV120.013930_bib54
  article-title: Achieving a golden mean: mechanisms by which coronaviruses ensure synthesis of the correct stoichiometric ratios of viral proteins
  publication-title: J. Virol
  doi: 10.1128/JVI.02480-09
– volume: 133
  start-page: 10094
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib56
  article-title: Identification of RNA pseudoknot-binding ligand that inhibits the −1 ribosomal frameshifting of SARS-coronavirus by structure-based virtual screening
  publication-title: J. Am. Chem. Soc
  doi: 10.1021/ja1098325
– volume: 94
  start-page: e01719
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib40
  article-title: Trypsin treatment unlocks barrier for zoonotic bat coronavirus infection
  publication-title: J. Virol
  doi: 10.1128/JVI.01774-19
– volume: 27
  start-page: 776
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib200
  article-title: The influenza A virus endoribonuclease PA-X usurps host mRNA processing machinery to limit host gene expression
  publication-title: Cell Rep
  doi: 10.1016/j.celrep.2019.03.063
– volume: 265
  start-page: 57
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib320
  article-title: PEDV nsp16 negatively regulates innate immunity to promote viral proliferation
  publication-title: Virus Res
  doi: 10.1016/j.virusres.2019.03.005
– volume: 181
  start-page: 281
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib35
  article-title: Structure, function, and antigenicity of the SARS-CoV-2 spike glycoprotein
  publication-title: Cell
  doi: 10.1016/j.cell.2020.02.058
– volume: 517
  start-page: 38
  year: 2018
  ident: 10.1074/jbc.REV120.013930_bib80
  article-title: New insights about the regulation of Nidovirus subgenomic mRNA synthesis
  publication-title: Virology
  doi: 10.1016/j.virol.2018.01.026
– volume: 295
  start-page: 6785
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib142
  article-title: Remdesivir is a direct-acting antiviral that inhibits RNA-dependent RNA polymerase from severe acute respiratory syndrome coronavirus 2 with high potency
  publication-title: J. Biol. Chem
  doi: 10.1074/jbc.RA120.013679
– volume: 79
  start-page: 14909
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib178
  article-title: Severe acute respiratory syndrome coronavirus group-specific open reading frames encode nonessential functions for replication in cell cultures and mice
  publication-title: J. Virol
  doi: 10.1128/JVI.79.23.14909-14922.2005
– volume: 80
  start-page: 296
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib181
  article-title: Neither the RNA nor the proteins of open reading frames 3a and 3b of the coronavirus infectious bronchitis virus are essential for replication
  publication-title: J. Virol
  doi: 10.1128/JVI.80.1.296-305.2006
– volume: 50
  start-page: 5419
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib249
  article-title: SARS-CoV accessory protein 3b induces AP-1 transcriptional activity through activation of JNK and ERK pathways
  publication-title: Biochemistry
  doi: 10.1021/bi200303r
– volume: 6
  start-page: e19612
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib198
  article-title: Deep sequencing reveals direct targets of gammaherpesvirus-induced mRNA decay and suggests that multiple mechanisms govern cellular transcript escape
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0019655
– volume: 21
  start-page: 1586
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib248
  article-title: Spike protein of SARS-CoV stimulates cyclooxygenase-2 expression via both calcium-dependent and calcium-independent protein kinase C pathways
  publication-title: FASEB J
  doi: 10.1096/fj.06-6589com
– volume: 1102
  start-page: 26
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib191
  article-title: The molecular biology of SARS coronavirus
  publication-title: Ann. N. Y. Acad. Sci
  doi: 10.1196/annals.1408.002
– volume: 89
  start-page: 1960
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib271
  article-title: Severe acute respiratory syndrome coronavirus 3a protein activates the mitochondrial death pathway through p38 MAP kinase activation
  publication-title: J. Gen. Virol
  doi: 10.1099/vir.0.83665-0
– volume: 111
  start-page: 15214
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib13
  article-title: Host cell entry of Middle East respiratory syndrome coronavirus after two-step, furin-mediated activation of the spike protein
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.1407087111
– volume: 87
  start-page: 12552
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib19
  article-title: Middle East respiratory syndrome coronavirus infection mediated by the transmembrane serine protease TMPRSS2
  publication-title: J. Virol
  doi: 10.1128/JVI.01890-13
– volume: 10
  start-page: 1426
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib315
  article-title: Coronavirus NSP6 restricts autophagosome expansion
  publication-title: Autophagy
  doi: 10.4161/auto.29309
– volume: 9
  start-page: e00218
  year: 2018
  ident: 10.1074/jbc.REV120.013930_bib140
  article-title: Coronavirus susceptibility to the antiviral remdesivir (GS-5734) is mediated by the viral polymerase and the proofreading exoribonuclease
  publication-title: mBio
  doi: 10.1128/mBio.00221-18
– volume: 109
  start-page: 9372
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib116
  article-title: RNA 3′-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10/nsp14 exoribonuclease complex
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.1201130109
– volume: 141
  start-page: 101
  year: 2017
  ident: 10.1074/jbc.REV120.013930_bib61
  article-title: Identification and evaluation of potent Middle East respiratory syndrome coronavirus (MERS-CoV) 3CLPro inhibitors
  publication-title: Antiviral Res
  doi: 10.1016/j.antiviral.2017.02.007
– volume: 11
  start-page: 607
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib239
  article-title: Antagonism of the interferon-induced OAS-RNase L pathway by murine coronavirus ns2 protein is required for virus replication and liver pathology
  publication-title: Cell Host Microbe
  doi: 10.1016/j.chom.2012.04.011
– volume: 88
  start-page: 7070
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib2
  article-title: Identification of diverse alphacoronaviruses and genomic characterization of a novel severe acute respiratory syndrome-like coronavirus from bats in China
  publication-title: J. Virol
  doi: 10.1128/JVI.00631-14
– volume: 153
  start-page: 299
  year: 2010
  ident: 10.1074/jbc.REV120.013930_bib322
  article-title: SARS-coronavirus protein 6 conformations required to impede protein import into the nucleus
  publication-title: Virus Res
  doi: 10.1016/j.virusres.2010.08.017
– volume: 203
  start-page: 631
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib9
  article-title: Tissue distribution of ACE2 protein, the functional receptor for SARS coronavirus: a first step in understanding SARS pathogenesis
  publication-title: J. Pathol
  doi: 10.1002/path.1570
– volume: 143
  start-page: 1667
  year: 2018
  ident: 10.1074/jbc.REV120.013930_bib143
  article-title: Functionalized 2,1-benzothiazine 2,2-dioxides as new inhibitors of Dengue NS5 RNA-dependent RNA polymerase
  publication-title: Eur. J. Med. Chem
  doi: 10.1016/j.ejmech.2017.10.064
– volume: 368
  start-page: 779
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib93
  article-title: Structure of the RNA-dependent RNA polymerase from COVID-19 virus
  publication-title: Science
  doi: 10.1126/science.abb7498
– volume: 103
  start-page: 12885
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib195
  article-title: Severe acute respiratory syndrome coronavirus nsp1 protein suppresses host gene expression by promoting host mRNA degradation
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.0603144103
– volume: 89
  start-page: 2080
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib312
  article-title: Mutations across murine hepatitis virus nsp4 alter virus fitness and membrane modifications
  publication-title: J. Virol
  doi: 10.1128/JVI.02776-14
– volume: 11
  start-page: e0165077
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib134
  article-title: Characterization of the role of hexamer AGUAAA and poly(A) tail in coronavirus polyadenylation
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0165077
– volume: 106
  start-page: 2366
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib206
  article-title: Chemokine up-regulation in SARS-coronavirus-infected, monocyte-derived human dendritic cells
  publication-title: Blood
  doi: 10.1182/blood-2004-10-4166
– volume: 174
  start-page: 11
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib304
  article-title: A structural analysis of M protein in coronavirus assembly and morphology
  publication-title: J. Struct. Biol
  doi: 10.1016/j.jsb.2010.11.021
– volume: 3
  start-page: 1013
  year: 2002
  ident: 10.1074/jbc.REV120.013930_bib260
  article-title: To kill or be killed: viral evasion of apoptosis
  publication-title: Nat. Immunol
  doi: 10.1038/ni1102-1013
– volume: 149
  start-page: 58
  year: 2018
  ident: 10.1074/jbc.REV120.013930_bib309
  article-title: Nsp3 of coronaviruses: structures and functions of a large multi-domain protein
  publication-title: Antiviral Res
  doi: 10.1016/j.antiviral.2017.11.001
– volume: 86
  start-page: 10173
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib127
  article-title: Signatures of host mRNA 5′ terminus for efficient hantavirus cap snatching
  publication-title: J. Virol
  doi: 10.1128/JVI.05560-11
– volume: 10
  start-page: e1004502
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib22
  article-title: Coronavirus cell entry occurs through the endo-/lysosomal pathway in a proteolysis-dependent manner
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1004502
– volume: 113
  start-page: 12262
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib28
  article-title: Proteolytic processing of Middle East respiratory syndrome coronavirus spikes expands virus tropism
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.1608147113
– volume: 10
  start-page: 2342
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib92
  article-title: Structure of the SARS-CoV nsp12 polymerase bound to nsp7 and nsp8 co-factors
  publication-title: Nat. Commun
  doi: 10.1038/s41467-019-10280-3
– volume: 27
  start-page: 325
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib189
  article-title: Genome composition and divergence of the novel coronavirus (2019-nCoV) originating in China
  publication-title: Cell Host Microbe
  doi: 10.1016/j.chom.2020.02.001
– volume: 23
  start-page: 986
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib17
  article-title: Structure of MERS-CoV spike receptor-binding domain complexed with human receptor DPP4
  publication-title: Cell Res
  doi: 10.1038/cr.2013.92
– volume: 1
  start-page: 110
  year: 2018
  ident: 10.1074/jbc.REV120.013930_bib124
  article-title: Evaluation of a recombination-resistant coronavirus as a broadly applicable, rapidly implementable vaccine platform
  publication-title: Commun. Biol
  doi: 10.1038/s42003-018-0175-7
– volume: 77
  start-page: 4597
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib303
  article-title: The small envelope protein E is not essential for murine coronavirus replication
  publication-title: J. Virol
  doi: 10.1128/JVI.77.8.4597-4608.2003
– volume: 361
  start-page: 243
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib316
  article-title: RNA recognition and cleavage by the SARS coronavirus endoribonuclease
  publication-title: J. Mol. Biol
  doi: 10.1016/j.jmb.2006.06.021
– volume: 78
  start-page: 7833
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib128
  article-title: Human coronavirus 229E nonstructural protein 13: characterization of duplex-unwinding, nucleoside triphosphatase, and RNA 5′-triphosphatase activities
  publication-title: J. Virol
  doi: 10.1128/JVI.78.14.7833-7838.2004
– volume: 19
  start-page: 181
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib209
  article-title: Dysregulated type I interferon and inflammatory monocyte-macrophage responses cause lethal pneumonia in SARS-CoV-infected mice
  publication-title: Cell Host Microbe
  doi: 10.1016/j.chom.2016.01.007
– volume: 235
  start-page: 1
  year: 1997
  ident: 10.1074/jbc.REV120.013930_bib123
  article-title: New insights into the mechanisms of RNA recombination
  publication-title: Virology
  doi: 10.1006/viro.1997.8681
– volume: 368
  start-page: 948
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib47
  article-title: A strategic approach to COVID-19 vaccine R&D
  publication-title: Science
  doi: 10.1126/science.abc5312
– volume: 75
  start-page: 4439
  year: 2001
  ident: 10.1074/jbc.REV120.013930_bib42
  article-title: Generation of a highly pathogenic avian influenza A virus from an avirulent field isolate by passaging in chickens
  publication-title: J. Virol
  doi: 10.1128/JVI.75.9.4439-4443.2001
– volume: 580
  start-page: 6807
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib250
  article-title: Augmentation of chemokine production by severe acute respiratory syndrome coronavirus 3a/X1 and 7a/X4 proteins through NF-κB activation
  publication-title: FEBS Lett
  doi: 10.1016/j.febslet.2006.11.046
– volume: 3
  start-page: 237
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib4
  article-title: Structure, function, and evolution of coronavirus spike proteins
  publication-title: Annu. Rev. Virol
  doi: 10.1146/annurev-virology-110615-042301
– volume: 5
  start-page: 279
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib53
  article-title: Altering SARS coronavirus frameshift efficiency affects genomic and subgenomic RNA production
  publication-title: Viruses
  doi: 10.3390/v5010279
– volume: 91
  start-page: e02116
  year: 2017
  ident: 10.1074/jbc.REV120.013930_bib229
  article-title: The severe acute respiratory syndrome coronavirus nucleocapsid inhibits type I interferon production by interfering with TRIM25-mediated RIG-I ubiquitination
  publication-title: J. Virol
  doi: 10.1128/JVI.02143-16
– volume: 64
  start-page: 5367
  year: 1990
  ident: 10.1074/jbc.REV120.013930_bib299
  article-title: Assembly of coronavirus spike protein into trimers and its role in epitope expression
  publication-title: J. Virol
  doi: 10.1128/jvi.64.11.5367-5375.1990
– volume: 13
  start-page: 751
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib300
  article-title: Architecture of the SARS coronavirus prefusion spike
  publication-title: Nat. Struct. Mol. Biol
  doi: 10.1038/nsmb1123
– volume: 7
  start-page: e1002059
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib131
  article-title: Crystal structure and functional analysis of the SARS-coronavirus RNA cap 2′-O-methyltransferase nsp10/nsp16 complex
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1002059
– volume: 78
  start-page: 779
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib37
  article-title: A multibasic cleavage site in the spike protein of SARS-CoV-2 is essential for infection of human lung cells
  publication-title: Mol. Cell
  doi: 10.1016/j.molcel.2020.04.022
– volume: 82
  start-page: 7212
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib324
  article-title: Severe acute respiratory syndrome coronavirus protein 6 accelerates murine hepatitis virus infections by more than one mechanism
  publication-title: J. Virol
  doi: 10.1128/JVI.02406-07
– volume: 92
  start-page: 216
  year: 2018
  ident: 10.1074/jbc.REV120.013930_bib318
  article-title: Structural and biochemical characterization of endoribonuclease Nsp15 encoded by Middle East respiratory syndrome coronavirus
  publication-title: J. Virol
  doi: 10.1128/JVI.00893-18
– volume: 111
  start-page: E3900
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib91
  article-title: One severe acute respiratory syndrome coronavirus protein complex integrates processive RNA polymerase and exonuclease activities
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.1323705111
– volume: 580
  start-page: 3643
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib326
  article-title: Expression and functional characterization of the putative protein 8b of the severe acute respiratory syndrome-associated coronavirus
  publication-title: FEBS Lett
  doi: 10.1016/j.febslet.2006.05.051
– volume: 78
  start-page: 5619
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib108
  article-title: Multiple enzymatic activities associated with severe acute respiratory syndrome coronavirus helicase
  publication-title: J. Virol
  doi: 10.1128/JVI.78.11.5619-5632.2004
– volume: 82
  start-page: 4471
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib196
  article-title: Severe acute respiratory syndrome coronavirus nsp1 suppresses host gene expression, including that of type I interferon, in infected cells
  publication-title: J. Virol
  doi: 10.1128/JVI.02472-07
– volume: 7
  start-page: e1002433
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib81
  article-title: SARS coronavirus nsp1 protein induces template-dependent endonucleolytic cleavage of mRNAs: viral mRNAs are resistant to nsp1-induced RNA cleavage
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1002433
– volume: 80
  start-page: 5927
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib149
  article-title: Ultrastructure and origin of membrane vesicles associated with the severe acute respiratory syndrome coronavirus replication complex
  publication-title: J. Virol
  doi: 10.1128/JVI.02501-05
– volume: 71
  start-page: 9278
  year: 1997
  ident: 10.1074/jbc.REV120.013930_bib161
  article-title: Protein interactions during coronavirus assembly
  publication-title: J. Virol
  doi: 10.1128/jvi.71.12.9278-9284.1997
– volume: 579
  start-page: 6699
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib267
  article-title: Adenovirus-mediated expression of the C-terminal domain of SARS-CoV spike protein is sufficient to induce apoptosis in Vero E6 cells
  publication-title: FEBS Lett
  doi: 10.1016/j.febslet.2005.10.065
– volume: 6
  start-page: e1000896
  year: 2010
  ident: 10.1074/jbc.REV120.013930_bib114
  article-title: Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1000896
– volume: 41
  start-page: 212
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib219
  article-title: Coagulation and autoimmunity in scleroderma interstitial lung disease
  publication-title: Semin. Arthritis Rheum
  doi: 10.1016/j.semarthrit.2010.10.002
– volume: 303
  start-page: 1666
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib192
  article-title: Molecular evolution of the SARS coronavirus during the course of the SARS epidemic in China
  publication-title: Science
  doi: 10.1126/science.1092002
– volume: 11
  start-page: 411
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib280
  article-title: Longitudinally profiling neutralizing antibody response to SARS coronavirus with pseudotypes
  publication-title: Emerg. Infect. Dis
  doi: 10.3201/eid1103.040906
– volume: 24
  start-page: 44
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib289
  article-title: Use of convalescent plasma therapy in SARS patients in Hong Kong
  publication-title: Eur. J. Clin. Microbiol. Infect. Dis
  doi: 10.1007/s10096-004-1271-9
– volume: 93
  start-page: 275
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib231
  article-title: Bat severe acute respiratory syndrome-like coronavirus ORF3b homologues display different interferon antagonist activities
  publication-title: J. Gen. Virol
  doi: 10.1099/vir.0.033589-0
– volume: 415
  start-page: 69
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib301
  article-title: Subcellular location and topology of severe acute respiratory syndrome coronavirus envelope protein
  publication-title: Virology
  doi: 10.1016/j.virol.2011.03.029
– volume: 83
  start-page: 2368
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib323
  article-title: Severe acute respiratory syndrome coronavirus protein 6 is required for optimal replication
  publication-title: J. Virol
  doi: 10.1128/JVI.02371-08
– volume: 350
  start-page: 358
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib39
  article-title: Furin cleavage of the SARS coronavirus spike glycoprotein enhances cell-cell fusion but does not affect virion entry
  publication-title: Virology
  doi: 10.1016/j.virol.2006.02.003
– volume: 5
  start-page: e01114
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib210
  article-title: Pathogenic influenza viruses and coronaviruses utilize similar and contrasting approaches to control interferon-stimulated gene responses
  publication-title: mBio
  doi: 10.1128/mBio.01174-14
– volume: 309
  start-page: 1864
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib286
  article-title: Structure of SARS coronavirus spike receptor-binding domain complexed with receptor
  publication-title: Science
  doi: 10.1126/science.1116480
– volume: 75
  start-page: 8173
  year: 2001
  ident: 10.1074/jbc.REV120.013930_bib20
  article-title: Targeted disruption of the Ceacam1 (MHVR) gene leads to reduced susceptibility of mice to mouse hepatitis virus infection
  publication-title: J. Virol
  doi: 10.1128/JVI.75.17.8173-8186.2001
– volume: 38
  start-page: 203
  year: 2010
  ident: 10.1074/jbc.REV120.013930_bib94
  article-title: The RNA polymerase activity of SARS-coronavirus nsp12 is primer dependent
  publication-title: Nucleic Acids Res
  doi: 10.1093/nar/gkp904
– volume: 20
  start-page: 363
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib44
  article-title: The trinity of COVID-19: immunity, inflammation and intervention
  publication-title: Nat. Rev. Immunol
  doi: 10.1038/s41577-020-0311-8
– volume: 85
  start-page: 873
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib12
  article-title: A transmembrane serine protease is linked to the severe acute respiratory syndrome coronavirus receptor and activates virus entry
  publication-title: J. Virol
  doi: 10.1128/JVI.02062-10
– volume: 43
  start-page: 8416
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib96
  article-title: Discovery of an essential nucleotidylating activity associated with a newly delineated conserved domain in the RNA polymerase-containing protein of all nidoviruses
  publication-title: Nucleic Acids Res
  doi: 10.1093/nar/gkv838
– volume: 82
  start-page: 9829
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib228
  article-title: Murine coronavirus mouse hepatitis virus is recognized by MDA5 and induces type I interferon in brain macrophages/microglia
  publication-title: J. Virol
  doi: 10.1128/JVI.01199-08
– volume: 84
  start-page: 280
  year: 2010
  ident: 10.1074/jbc.REV120.013930_bib311
  article-title: Murine hepatitis virus nonstructural protein 4 regulates virus-induced membrane modifications and replication complex function
  publication-title: J. Virol
  doi: 10.1128/JVI.01772-09
– volume: 478
  start-page: 75
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib164
  article-title: Coronavirus envelope (E) protein remains at the site of assembly
  publication-title: Virology
  doi: 10.1016/j.virol.2015.02.005
– volume: 387
  start-page: 402
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib325
  article-title: The 8ab protein of SARS-CoV is a luminal ER membrane-associated protein and induces the activation of ATF6
  publication-title: Virology
  doi: 10.1016/j.virol.2009.02.021
– volume: 81
  start-page: 6346
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib273
  article-title: Induction of apoptosis by the severe acute respiratory syndrome coronavirus 7a protein is dependent on its interaction with the Bcl-XL protein
  publication-title: J. Virol
  doi: 10.1128/JVI.00090-07
– volume: 361
  start-page: 1767
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib284
  article-title: Clinical progression and viral load in a community outbreak of coronavirus-associated SARS pneumonia: a prospective study
  publication-title: Lancet
  doi: 10.1016/S0140-6736(03)13412-5
– volume: 176
  start-page: 104742
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib36
  article-title: The spike glycoprotein of the new coronavirus 2019-nCoV contains a furin-like cleavage site absent in CoV of the same clade
  publication-title: Antiviral Res
  doi: 10.1016/j.antiviral.2020.104742
– volume: 85
  start-page: 4122
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib10
  article-title: Evidence that TMPRSS2 activates the severe acute respiratory syndrome coronavirus spike protein for membrane fusion and reduces viral control by the humoral immune response
  publication-title: J. Virol
  doi: 10.1128/JVI.02232-10
– volume: 133
  start-page: 113
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib187
  article-title: SARS coronavirus accessory proteins
  publication-title: Virus Res
  doi: 10.1016/j.virusres.2007.10.009
– volume: 84
  start-page: 4619
  year: 2010
  ident: 10.1074/jbc.REV120.013930_bib63
  article-title: Deubiquitinating and interferon antagonism activities of coronavirus papain-like proteases
  publication-title: J. Virol
  doi: 10.1128/JVI.02406-09
– volume: 81
  start-page: 12135
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib113
  article-title: High fidelity of murine hepatitis virus replication is decreased in nsp14 exoribonuclease mutants
  publication-title: J. Virol
  doi: 10.1128/JVI.01296-07
– volume: 81
  start-page: 548
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib232
  article-title: Severe acute respiratory syndrome coronavirus open reading frame (ORF) 3b, ORF 6, and nucleocapsid proteins function as interferon antagonists
  publication-title: J. Virol
  doi: 10.1128/JVI.01782-06
– volume: 12
  start-page: 844
  year: 2010
  ident: 10.1074/jbc.REV120.013930_bib150
  article-title: Qualitative and quantitative ultrastructural analysis of the membrane rearrangements induced by coronavirus
  publication-title: Cell. Microbiol
  doi: 10.1111/j.1462-5822.2010.01437.x
– volume: 18
  start-page: 255
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib293
  article-title: Differentiation of memory B and T cells
  publication-title: Curr. Opin. Immunol
  doi: 10.1016/j.coi.2006.03.020
– volume: 106
  start-page: 12067
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib226
  article-title: 5′-Triphosphate RNA requires base-paired structures to activate antiviral signaling via RIG-I
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.0900971106
– volume: 286
  start-page: 3222
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib74
  article-title: Interaction of coronavirus nucleocapsid protein with the 5′- and 3′- ends of the coronavirus genome is involved in genome circularization and negative-strand RNA synthesis
  publication-title: FEBS J
  doi: 10.1111/febs.14863
– volume: 9
  start-page: e1003565
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib115
  article-title: Coronaviruses lacking exoribonuclease activity are susceptible to lethal mutagenesis: evidence for proofreading and potential therapeutics
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1003565
– volume: 93
  start-page: e00319
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib199
  article-title: C19ORF66 broadly escapes virus-induced endonuclease cleavage and restricts Kaposi's sarcoma-associated herpesvirus
  publication-title: J. Virol
  doi: 10.1128/JVI.00373-19
– volume: 361
  start-page: 18
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib242
  article-title: Group 2 coronaviruses prevent immediate early interferon induction by protection of viral RNA from host cell recognition
  publication-title: Virology
  doi: 10.1016/j.virol.2007.01.020
– volume: 382
  start-page: 1177
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib283
  article-title: SARS-CoV-2 viral load in upper respiratory specimens of infected patients
  publication-title: N. Engl. J. Med
  doi: 10.1056/NEJMc2001737
– volume: 181
  start-page: 271
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib6
  article-title: SARS-CoV-2 cell entry depends on ACE2 and TMPRSS2 and is blocked by a clinically proven protease inhibitor
  publication-title: Cell
  doi: 10.1016/j.cell.2020.02.052
– volume: 82
  start-page: 300
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib215
  article-title: Type I interferons are essential in controlling neurotropic coronavirus infection irrespective of functional CD8 T cells
  publication-title: J. Virol
  doi: 10.1128/JVI.01794-07
– volume: 78
  start-page: 980
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib78
  article-title: Sequence motifs involved in the regulation of discontinuous coronavirus subgenomic RNA synthesis
  publication-title: J. Virol
  doi: 10.1128/JVI.78.2.980-994.2004
– volume: 10
  start-page: e1004320
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib253
  article-title: The PDZ-binding motif of severe acute respiratory syndrome coronavirus envelope protein is a determinant of viral pathogenesis
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1004320
– volume: 579
  start-page: 265
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib188
  article-title: A new coronavirus associated with human respiratory disease in China
  publication-title: Nature
  doi: 10.1038/s41586-020-2008-3
– volume: 8
  start-page: e76469
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib16
  article-title: Role of the spike glycoprotein of human Middle East respiratory syndrome coronavirus (MERS-CoV) in virus entry and syncytia formation
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0076469
– volume: 87
  start-page: 5502
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib18
  article-title: The spike protein of the emerging betacoronavirus EMC uses a novel coronavirus receptor for entry, can be activated by TMPRSS2, and is targeted by neutralizing antibodies
  publication-title: J. Virol
  doi: 10.1128/JVI.00128-13
– volume: 82
  start-page: 11318
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib3
  article-title: The M, E, and N structural proteins of the severe acute respiratory syndrome coronavirus are required for efficient assembly, trafficking, and release of virus-like particles
  publication-title: J. Virol
  doi: 10.1128/JVI.01052-08
– volume: 479–480
  start-page: 66
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib126
  article-title: Innate immune restriction and antagonism of viral RNA lacking 2′-O methylation
  publication-title: Virology
  doi: 10.1016/j.virol.2015.01.019
– volume: 537
  start-page: 198
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib172
  article-title: Coronavirus genomic RNA packaging
  publication-title: Virology
  doi: 10.1016/j.virol.2019.08.031
– volume: 16
  start-page: 1134
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib204
  article-title: A two-pronged strategy to suppress host protein synthesis by SARS coronavirus Nsp1 protein
  publication-title: Nat. Struct. Mol. Biol
  doi: 10.1038/nsmb.1680
– volume: 1
  start-page: 111
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib90
  article-title: Thinking outside the triangle: replication fidelity of the largest RNA viruses
  publication-title: Annu. Rev. Virol
  doi: 10.1146/annurev-virology-031413-085507
– volume: 426
  start-page: 450
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib8
  article-title: Angiotensin-converting enzyme 2 is a functional receptor for the SARS coronavirus
  publication-title: Nature
  doi: 10.1038/nature02145
– volume: 48
  start-page: 1
  year: 1997
  ident: 10.1074/jbc.REV120.013930_bib185
  article-title: The molecular biology of coronaviruses
  publication-title: Adv. Virus Res
  doi: 10.1016/S0065-3527(08)60286-9
– volume: 494
  start-page: 491
  year: 2001
  ident: 10.1074/jbc.REV120.013930_bib71
  article-title: Mouse hepatitis virus minus-strand templates are unstable and turnover during viral replication
  publication-title: Adv. Exp. Med. Biol
  doi: 10.1007/978-1-4615-1325-4_71
– volume: 14
  start-page: 154
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib120
  article-title: Engineering attenuated virus vaccines by controlling replication fidelity
  publication-title: Nat. Med
  doi: 10.1038/nm1726
– volume: 85
  start-page: 4572
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib68
  article-title: Mobility and interactions of coronavirus nonstructural protein 4
  publication-title: J. Virol
  doi: 10.1128/JVI.00042-11
– volume: 96
  start-page: 127
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib73
  article-title: Coronavirus cis-acting RNA elements
  publication-title: Adv. Virus Res
  doi: 10.1016/bs.aivir.2016.08.007
– volume: 300
  start-page: 1763
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib62
  article-title: Coronavirus main proteinase (3CLpro) structure: basis for design of anti-SARS drugs
  publication-title: Science
  doi: 10.1126/science.1085658
– volume: 85
  start-page: 6381
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib136
  article-title: Blocking eIF4E-eIF4G interaction as a strategy to impair coronavirus replication
  publication-title: J. Virol
  doi: 10.1128/JVI.00078-11
– volume: 106
  start-page: 3484
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib129
  article-title: Functional screen reveals SARS coronavirus nonstructural protein nsp14 as a novel cap N7 methyltransferase
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.0808790106
– volume: 18
  start-page: 1825
  year: 1990
  ident: 10.1074/jbc.REV120.013930_bib52
  article-title: The primary structure and expression of the second open reading frame of the polymerase gene of the coronavirus MHV-A59; a highly conserved polymerase is expressed by an efficient ribosomal frameshifting mechanism
  publication-title: Nucleic Acids Res
  doi: 10.1093/nar/18.7.1825
– volume: 494
  start-page: 83
  year: 2001
  ident: 10.1074/jbc.REV120.013930_bib179
  article-title: Analysis of nonessential gene function in recombinant MHV-JHM. Gene 4 knockout recombinant virus
  publication-title: Adv. Exp. Med. Biol
  doi: 10.1007/978-1-4615-1325-4_13
– volume: 581
  start-page: 215
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib34
  article-title: Structure of the SARS-CoV-2 spike receptor-binding domain bound to the ACE2 receptor
  publication-title: Nature
  doi: 10.1038/s41586-020-2180-5
– volume: 101
  start-page: 122
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib138
  article-title: SARS-CoV ORF1b-encoded nonstructural proteins 12-16: replicative enzymes as antiviral targets
  publication-title: Antiviral Res
  doi: 10.1016/j.antiviral.2013.11.006
– volume: 12
  start-page: 341
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib102
  article-title: The nsp9 replicase protein of SARS-coronavirus, structure and functional insights
  publication-title: Structure
  doi: 10.1016/j.str.2004.01.016
– volume: 11
  start-page: e01610
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib193
  article-title: Discovery and Genomic Characterization of a 382-Nucleotide Deletion in ORF7b and ORF8 during the Early Evolution of SARS-CoV-2
  publication-title: bioRxiv
– volume: 47
  start-page: 6538
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib106
  article-title: Delicate structural coordination of the severe acute respiratory syndrome coronavirus Nsp13 upon ATP hydrolysis
  publication-title: Nucleic Acids Res
  doi: 10.1093/nar/gkz409
– volume: 10
  start-page: 320
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib148
  article-title: Ultrastructural characterization of SARS coronavirus
  publication-title: Emerg. Infect. Dis
  doi: 10.3201/eid1002.030913
– volume: 131
  start-page: 339
  year: 1995
  ident: 10.1074/jbc.REV120.013930_bib162
  article-title: Envelope glycoprotein interactions in coronavirus assembly
  publication-title: J. Cell Biol
  doi: 10.1083/jcb.131.2.339
– volume: 79
  start-page: 11335
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib236
  article-title: A severe acute respiratory syndrome-associated coronavirus-specific protein enhances virulence of an attenuated murine coronavirus
  publication-title: J. Virol
  doi: 10.1128/JVI.79.17.11335-11342.2005
– volume: 81
  start-page: 11620
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib201
  article-title: Severe acute respiratory syndrome coronavirus evades antiviral signaling: role of nsp1 and rational design of an attenuated strain
  publication-title: J. Virol
  doi: 10.1128/JVI.00702-07
– volume: 73
  start-page: 1907
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib257
  article-title: Apoptosis, pyroptosis, and necrosis: mechanistic description of dead and dying eukaryotic cells
  publication-title: Infect. Immun
  doi: 10.1128/IAI.73.4.1907-1916.2005
– volume: 296
  start-page: 177
  year: 2002
  ident: 10.1074/jbc.REV120.013930_bib176
  article-title: The group-specific murine coronavirus genes are not essential, but their deletion, by reverse genetics, is attenuating in the natural host
  publication-title: Virology
  doi: 10.1006/viro.2002.1412
– volume: 30
  start-page: 343
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib46
  article-title: Inhibition of SARS-CoV-2 (previously 2019-nCoV) infection by a highly potent pan-coronavirus fusion inhibitor targeting its spike protein that harbors a high capacity to mediate membrane fusion
  publication-title: Cell Res
  doi: 10.1038/s41422-020-0305-x
– volume: 196
  start-page: 405
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib275
  article-title: Open reading frame 8a of the human severe acute respiratory syndrome coronavirus not only promotes viral replication but also induces apoptosis
  publication-title: J. Infect. Dis
  doi: 10.1086/519166
– volume: 56
  start-page: 919
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib291
  article-title: Experience of using convalescent plasma for severe acute respiratory syndrome among healthcare workers in a Taiwan hospital
  publication-title: J. Antimicrob. Chemother
  doi: 10.1093/jac/dki346
– volume: 922
  start-page: 1
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib104
  article-title: Functions of single-strand DNA-binding proteins in DNA replication, recombination, and repair
  publication-title: Methods Mol. Biol
  doi: 10.1007/978-1-62703-032-8_1
– volume: 361
  start-page: 1773
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib218
  article-title: Lung pathology of fatal severe acute respiratory syndrome
  publication-title: Lancet
  doi: 10.1016/S0140-6736(03)13413-7
– volume: 213
  start-page: 904
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib266
  article-title: Middle East respiratory syndrome coronavirus efficiently infects human primary T lymphocytes and activates the extrinsic and intrinsic apoptosis pathways
  publication-title: J. Infect. Dis
  doi: 10.1093/infdis/jiv380
– volume: 79
  start-page: 8065
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib182
  article-title: Gene 5 of the avian coronavirus infectious bronchitis virus is not essential for replication
  publication-title: J. Virol
  doi: 10.1128/JVI.79.13.8065-8078.2005
– volume: 7
  start-page: e00212
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib237
  article-title: Middle East respiratory syndrome coronavirus NS4b protein inhibits host RNase L activation
  publication-title: mBio
  doi: 10.1128/mBio.00258-16
– volume: 96
  start-page: 21
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib146
  article-title: The viral RNA capping machinery as a target for antiviral drugs
  publication-title: Antiviral Res
  doi: 10.1016/j.antiviral.2012.07.007
– volume: 18
  start-page: 1820
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib118
  article-title: A live, impaired-fidelity coronavirus vaccine protects in an aged, immunocompromised mouse model of lethal disease
  publication-title: Nat. Med
  doi: 10.1038/nm.2972
– volume: 77
  start-page: 2922
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib175
  article-title: Nucleocapsid-independent specific viral RNA packaging via viral envelope protein and viral RNA signal
  publication-title: J. Virol
  doi: 10.1128/JVI.77.5.2922-2927.2003
– volume: 13
  start-page: 4873
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib55
  article-title: The role of programmed-1 ribosomal frameshifting in coronavirus propagation
  publication-title: Front. Biosci
  doi: 10.2741/3046
– volume: 330
  start-page: 322
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib163
  article-title: SARS coronavirus E protein forms cation-selective ion channels
  publication-title: Virology
  doi: 10.1016/j.virol.2004.09.033
– volume: 89
  start-page: 9029
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib307
  article-title: The nucleocapsid protein of coronaviruses acts as a viral suppressor of RNA silencing in mammalian cells
  publication-title: J. Virol
  doi: 10.1128/JVI.01331-15
– volume: 8
  start-page: 237
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib72
  article-title: RNA-RNA and RNA-protein interactions in coronavirus replication and transcription
  publication-title: RNA Biol
  doi: 10.4161/rna.8.2.14991
– volume: 56
  start-page: 4718
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib145
  article-title: Severe acute respiratory syndrome coronavirus replication inhibitor that interferes with the nucleic acid unwinding of the viral helicase
  publication-title: Antimicrob. Agents Chemother
  doi: 10.1128/AAC.00957-12
– volume: 13
  start-page: 461
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib261
  article-title: Viral apoptotic mimicry
  publication-title: Nat. Rev. Microbiol
  doi: 10.1038/nrmicro3469
– volume: 311
  start-page: 870
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib252
  article-title: Activation of AP-1 signal transduction pathway by SARS coronavirus nucleocapsid protein
  publication-title: Biochem. Biophys. Res. Commun
  doi: 10.1016/j.bbrc.2003.10.075
– volume: 93
  start-page: e00291
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib99
  article-title: Identification and characterization of a human coronavirus 229E nonstructural protein 8-associated RNA 3′-terminal adenylyltransferase activity
  publication-title: J. Virol
  doi: 10.1128/JVI.00291-19
– volume: 362
  start-page: 293
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib223
  article-title: Treatment of SARS with human interferons
  publication-title: Lancet
  doi: 10.1016/S0140-6736(03)13973-6
– volume: 68
  start-page: 8131
  year: 1994
  ident: 10.1074/jbc.REV120.013930_bib133
  article-title: Identification of the cis-acting signal for minus-strand RNA synthesis of a murine coronavirus: implications for the role of minus-strand RNA in RNA replication and transcription
  publication-title: J. Virol
  doi: 10.1128/jvi.68.12.8131-8140.1994
– volume: 77
  start-page: 7890
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib169
  article-title: Transmissible gastroenteritis coronavirus packaging signal is located at the 5′ end of the virus genome
  publication-title: J. Virol
  doi: 10.1128/JVI.77.14.7890-7902.2003
– volume: 83
  start-page: 12998
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib310
  article-title: Nuclear magnetic resonance structure of the nucleic acid-binding domain of severe acute respiratory syndrome coronavirus nonstructural protein 3
  publication-title: J. Virol
  doi: 10.1128/JVI.01253-09
– volume: 202
  start-page: 120
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib5
  article-title: Host cell proteases: critical determinants of coronavirus tropism and pathogenesis
  publication-title: Virus Res
  doi: 10.1016/j.virusres.2014.11.021
– volume: 91
  start-page: 1
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib57
  article-title: Interference of ribosomal frameshifting by antisense peptide nucleic acids suppresses SARS coronavirus replication
  publication-title: Antiviral Res
  doi: 10.1016/j.antiviral.2011.04.009
– volume: 394
  start-page: 544
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib87
  article-title: Coronavirus N protein N-terminal domain (NTD) specifically binds the transcriptional regulatory sequence (TRS) and melts TRS-cTRS RNA duplexes
  publication-title: J. Mol. Biol
  doi: 10.1016/j.jmb.2009.09.040
– volume: 10
  start-page: 676
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib290
  article-title: Retrospective comparison of convalescent plasma with continuing high-dose methylprednisolone treatment in SARS patients
  publication-title: Clin. Microbiol. Infect
  doi: 10.1111/j.1469-0691.2004.00956.x
– volume: 11
  start-page: 2251
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib288
  article-title: A human monoclonal antibody blocking SARS-CoV-2 infection
  publication-title: Nat. Commun
  doi: 10.1038/s41467-020-16256-y
– volume: 78
  start-page: 6723
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib272
  article-title: A novel severe acute respiratory syndrome coronavirus protein, U274, is transported to the cell surface and undergoes endocytosis
  publication-title: J. Virol
  doi: 10.1128/JVI.78.13.6723-6734.2004
– volume: 84
  start-page: 2169
  year: 2010
  ident: 10.1074/jbc.REV120.013930_bib88
  article-title: Coronavirus nucleocapsid protein facilitates template switching and is required for efficient transcription
  publication-title: J. Virol
  doi: 10.1128/JVI.02011-09
– volume: 87
  start-page: 12611
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib313
  article-title: Chimeric exchange of coronavirus nsp5 proteases (3CLpro) identifies common and divergent regulatory determinants of protease activity
  publication-title: J. Virol
  doi: 10.1128/JVI.02050-13
– volume: 76
  start-page: 3697
  year: 2002
  ident: 10.1074/jbc.REV120.013930_bib147
  article-title: RNA replication of mouse hepatitis virus takes place at double-membrane vesicles
  publication-title: J. Virol
  doi: 10.1128/JVI.76.8.3697-3708.2002
– volume: 10
  start-page: 1814
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib240
  article-title: Antagonism of dsRNA-induced innate immune pathways by NS4a and NS4b accessory proteins during MERS coronavirus infection
  publication-title: mBio
  doi: 10.1128/mBio.00319-19
– volume: 26
  start-page: 450
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib31
  article-title: The proximal origin of SARS-CoV-2
  publication-title: Nat. Med
  doi: 10.1038/s41591-020-0820-9
– volume: 383
  start-page: 13
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib254
  article-title: The SARS coronavirus nucleocapsid protein induces actin reorganization and apoptosis in COS-1 cells in the absence of growth factors
  publication-title: Biochem. J
  doi: 10.1042/BJ20040984
– volume: 7
  start-page: e1002315
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib269
  article-title: Severe acute respiratory syndrome coronavirus envelope protein regulates cell stress response and apoptosis
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1002315
– volume: 86
  start-page: 11128
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib197
  article-title: Severe acute respiratory syndrome coronavirus nsp1 facilitates efficient propagation in cells through a specific translational shutoff of host mRNA
  publication-title: J. Virol
  doi: 10.1128/JVI.01700-12
– volume: 4
  start-page: 26
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib244
  article-title: Human coronaviruses: a review of virus-host interactions
  publication-title: Diseases
  doi: 10.3390/diseases4030026
– volume: 311
  start-page: 16
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib180
  article-title: Emergence of a coronavirus infectious bronchitis virus mutant with a truncated 3b gene: functional characterization of the 3b protein in pathogenesis and replication
  publication-title: Virology
  doi: 10.1016/S0042-6822(03)00117-X
– volume: 8
  start-page: 25
  year: 2019
  ident: 10.1074/jbc.REV120.013930_bib154
  article-title: Determination of host proteins composing the microenvironment of coronavirus replicase complexes by proximity-labeling
  publication-title: Elife
  doi: 10.7554/eLife.42037
– volume: 9
  start-page: e1003760
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib111
  article-title: Coronaviruses as DNA wannabes: a new model for the regulation of RNA virus replication fidelity
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1003760
– volume: 64
  start-page: 6045
  year: 1990
  ident: 10.1074/jbc.REV120.013930_bib168
  article-title: Analysis of efficiently packaged defective interfering RNAs of murine coronavirus: localization of a possible RNA-packaging signal
  publication-title: J. Virol
  doi: 10.1128/jvi.64.12.6045-6053.1990
– volume: 284
  start-page: 16202
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib233
  article-title: Severe acute respiratory syndrome coronavirus M protein inhibits type I interferon production by impeding the formation of TRAF3·TANK·TBK1/IKKε complex
  publication-title: J. Biol. Chem
  doi: 10.1074/jbc.M109.008227
– volume: 170
  start-page: 1136
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib262
  article-title: Pathology and pathogenesis of severe acute respiratory syndrome
  publication-title: Am. J. Pathol
  doi: 10.2353/ajpath.2007.061088
– volume: 213
  start-page: 877
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib265
  article-title: Discovery of T-cell infection and apoptosis by Middle East respiratory syndrome coronavirus
  publication-title: J. Infect. Dis
  doi: 10.1093/infdis/jiv381
– volume: 87
  start-page: 177
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib84
  article-title: Long-distance RNA-RNA interactions in the coronavirus genome form high-order structures promoting discontinuous RNA synthesis during transcription
  publication-title: J. Virol
  doi: 10.1128/JVI.01782-12
– volume: 3
  start-page: e3299
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib296
  article-title: Genome-wide analysis of protein-protein interactions and involvement of viral proteins in SARS-CoV replication
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0003299
– volume: 287
  start-page: 1
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib50
  article-title: Coronavirus genome structure and replication
  publication-title: Curr. Top. Microbiol. Immunol
– volume: 218
  start-page: 52
  year: 1996
  ident: 10.1074/jbc.REV120.013930_bib156
  article-title: The production of recombinant infectious DI-particles of a murine coronavirus in the absence of helper virus
  publication-title: Virology
  doi: 10.1006/viro.1996.0165
– volume: 179
  start-page: 104811
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib225
  article-title: Antiviral activities of type I interferons to SARS-CoV-2 infection
  publication-title: Antiviral Res
  doi: 10.1016/j.antiviral.2020.104811
– volume: 89
  start-page: 10970
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib203
  article-title: Middle East respiratory syndrome coronavirus nsp1 inhibits host gene expression by selectively targeting mRNAs transcribed in the nucleus while sparing mRNAs of cytoplasmic origin
  publication-title: J. Virol
  doi: 10.1128/JVI.01352-15
– volume: 11
  start-page: 362
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib277
  article-title: Profiles of antibody responses against severe acute respiratory syndrome coronavirus recombinant proteins and their potential use as diagnostic markers
  publication-title: Clin. Diagn. Lab. Immunol
– volume: 122
  start-page: 20
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib259
  article-title: Over-expression of severe acute respiratory syndrome coronavirus 3b protein induces both apoptosis and necrosis in Vero E6 cells
  publication-title: Virus Res
  doi: 10.1016/j.virusres.2006.06.005
– volume: 2
  start-page: e459
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib295
  article-title: Analysis of intraviral protein-protein interactions of the SARS coronavirus ORFeome
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0000459
– volume: 102
  start-page: 11876
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib24
  article-title: Inhibitors of cathepsin L prevent severe acute respiratory syndrome coronavirus entry
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.0505577102
– volume: 78
  start-page: 3863
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib177
  article-title: Live, attenuated coronavirus vaccines through the directed deletion of group-specific genes provide protection against feline infectious peritonitis
  publication-title: J. Virol
  doi: 10.1128/JVI.78.8.3863-3871.2004
– volume: 300
  start-page: 1399
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib183
  article-title: The genome sequence of the SARS-associated coronavirus
  publication-title: Science
  doi: 10.1126/science.1085953
– volume: 9
  start-page: 1392
  year: 2002
  ident: 10.1074/jbc.REV120.013930_bib263
  article-title: In vitro detection of apoptosis in monocytes/macrophages infected with human coronavirus
  publication-title: Clin. Diagn. Lab. Immunol
– volume: 81
  start-page: 2418
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib167
  article-title: The cytoplasmic tail of the severe acute respiratory syndrome coronavirus spike protein contains a novel endoplasmic reticulum retrieval signal that binds COPI and promotes interaction with membrane protein
  publication-title: J. Virol
  doi: 10.1128/JVI.02146-06
– volume: 235
  start-page: 185
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib212
  article-title: Molecular pathology of emerging coronavirus infections
  publication-title: J. Pathol
  doi: 10.1002/path.4454
– volume: 3
  start-page: e109
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib235
  article-title: Coronavirus non-structural protein 1 is a major pathogenicity factor: implications for the rational design of coronavirus vaccines
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.0030109
– volume: 22
  start-page: 420
  year: 2017
  ident: 10.1074/jbc.REV120.013930_bib121
  article-title: RNA recombination enhances adaptability and is required for virus spread and virulence
  publication-title: Cell Host Microbe
  doi: 10.1016/j.chom.2017.08.006
– volume: 202
  start-page: 12
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib107
  article-title: What we know but do not understand about nidovirus helicases
  publication-title: Virus Res
  doi: 10.1016/j.virusres.2014.12.001
– year: 2020
  ident: 10.1074/jbc.REV120.013930_bib125
  article-title: The coronavirus proofreading exoribonuclease mediates extensive viral recombination
  publication-title: bioRxiv
– volume: 25
  start-page: 4933
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib97
  article-title: A second, non-canonical RNA-dependent RNA polymerase in SARS coronavirus
  publication-title: EMBO J
  doi: 10.1038/sj.emboj.7601368
– volume: 93
  start-page: 494
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib216
  article-title: Infection of human alveolar macrophages by human coronavirus strain 229E
  publication-title: J. Gen. Virol
  doi: 10.1099/vir.0.038414-0
– volume: 83
  start-page: 7221
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib308
  article-title: Identification of in vivo-interacting domains of the murine coronavirus nucleocapsid protein
  publication-title: J. Virol
  doi: 10.1128/JVI.00440-09
– volume: 16
  start-page: 249
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib58
  article-title: Targeting frameshifting in the human immunodeficiency virus
  publication-title: Expert Opin. Ther. Targets
  doi: 10.1517/14728222.2012.665879
– volume: 80
  start-page: 2684
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib208
  article-title: Modeling the early events of severe acute respiratory syndrome coronavirus infection in vitro
  publication-title: J. Virol
  doi: 10.1128/JVI.80.6.2684-2693.2006
– volume: 41
  start-page: 557
  year: 1982
  ident: 10.1074/jbc.REV120.013930_bib75
  article-title: Further characterization of mRNA's of mouse hepatitis virus: presence of common 5-”end nucleotides
  publication-title: J. Virol
  doi: 10.1128/jvi.41.2.557-565.1982
– volume: 114
  start-page: E4251
  year: 2017
  ident: 10.1074/jbc.REV120.013930_bib317
  article-title: Coronavirus nonstructural protein 15 mediates evasion of dsRNA sensors and limits apoptosis in macrophages
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.1618310114
– volume: 38
  start-page: 623
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib48
  article-title: The architecture of SARS-CoV-2 transcriptome
  publication-title: Cell
– volume: 82
  start-page: 3882
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib83
  article-title: Identification of a coronavirus transcription enhancer
  publication-title: J. Virol
  doi: 10.1128/JVI.02622-07
– volume: 115
  start-page: 21
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib65
  article-title: The SARS-coronavirus papain-like protease: structure, function and inhibition by designed antiviral compounds
  publication-title: Antiviral Res
  doi: 10.1016/j.antiviral.2014.12.015
– year: 2020
  ident: 10.1074/jbc.REV120.013930_bib1
  article-title: Coronavirus infections—more than just the common cold
  publication-title: JAMA
  doi: 10.1001/jama.2020.0757
– volume: 367
  start-page: 1260
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib33
  article-title: Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation
  publication-title: Science
  doi: 10.1126/science.abb2507
– volume: 279
  start-page: 43661
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib166
  article-title: A novel sorting signal for intracellular localization is present in the S protein of a porcine coronavirus but absent from severe acute respiratory syndrome-associated coronavirus
  publication-title: J. Biol. Chem
  doi: 10.1074/jbc.M407233200
– volume: 87
  start-page: 5182
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib159
  article-title: Functional analysis of the murine coronavirus genomic RNA packaging signal
  publication-title: J. Virol
  doi: 10.1128/JVI.00100-13
– volume: 34
  start-page: 743
  year: 2003
  ident: 10.1074/jbc.REV120.013930_bib217
  article-title: Lung pathology of severe acute respiratory syndrome (SARS): a study of 8 autopsy cases from Singapore
  publication-title: Hum. Pathol
  doi: 10.1016/S0046-8177(03)00367-8
– volume: 142
  start-page: 19
  year: 2009
  ident: 10.1074/jbc.REV120.013930_bib251
  article-title: SARS coronavirus spike protein-induced innate immune response occurs via activation of the NF-κB pathway in human monocyte macrophages in vitro
  publication-title: Virus Res
  doi: 10.1016/j.virusres.2009.01.005
– volume: 13
  start-page: 59
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib306
  article-title: Modular organization of SARS coronavirus nucleocapsid protein
  publication-title: J. Biomed. Sci
  doi: 10.1007/s11373-005-9035-9
– volume: 78
  start-page: 6048
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib15
  article-title: Cleavage inhibition of the murine coronavirus spike protein by a furin-like enzyme affects cell-cell but not virus-cell fusion
  publication-title: J. Virol
  doi: 10.1128/JVI.78.11.6048-6054.2004
– volume: 74
  start-page: 8127
  year: 2000
  ident: 10.1074/jbc.REV120.013930_bib160
  article-title: Characterization of the coronavirus M protein and nucleocapsid interaction in infected cells
  publication-title: J. Virol
  doi: 10.1128/JVI.74.17.8127-8134.2000
– volume: 104
  start-page: 12123
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib285
  article-title: Potent cross-reactive neutralization of SARS coronavirus isolates by human monoclonal antibodies
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.0701000104
– volume: 8
  start-page: e01503
  year: 2017
  ident: 10.1074/jbc.REV120.013930_bib119
  article-title: Proofreading-deficient coronaviruses adapt for increased fitness over long-term passage without reversion of exoribonuclease-inactivating mutations
  publication-title: mBio
  doi: 10.1128/mBio.01503-17
– volume: 291
  start-page: 9218
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib27
  article-title: Glycopeptide antibiotics potently inhibit cathepsin L in the late endosome/lysosome and block the entry of Ebola virus, Middle East respiratory syndrome coronavirus (MERS-CoV), and severe acute respiratory syndrome coronavirus (SARS-CoV)
  publication-title: J. Biol. Chem
  doi: 10.1074/jbc.M116.716100
– volume: 89
  start-page: 6418
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib117
  article-title: Mutations in coronavirus nonstructural protein 10 decrease virus replication fidelity
  publication-title: J. Virol
  doi: 10.1128/JVI.00110-15
– volume: 81
  start-page: 853
  year: 2000
  ident: 10.1074/jbc.REV120.013930_bib59
  article-title: Virus-encoded proteinases and proteolytic processing in the Nidovirales
  publication-title: J. Gen. Virol
  doi: 10.1099/0022-1317-81-4-853
– volume: 479–480
  start-page: 600
  year: 2015
  ident: 10.1074/jbc.REV120.013930_bib194
  article-title: Emerging roles for RNA degradation in viral replication and antiviral defense
  publication-title: Virology
  doi: 10.1016/j.virol.2015.02.007
– volume: 81
  start-page: 9812
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib234
  article-title: Severe acute respiratory syndrome coronavirus ORF6 antagonizes STAT1 function by sequestering nuclear import factors on the rough endoplasmic reticulum/Golgi membrane
  publication-title: J. Virol
  doi: 10.1128/JVI.01012-07
– volume: 450–451
  start-page: 64
  year: 2014
  ident: 10.1074/jbc.REV120.013930_bib64
  article-title: MERS-CoV papain-like protease has deISGylating and deubiquitinating activities
  publication-title: Virology
  doi: 10.1016/j.virol.2013.11.040
– volume: 767
  start-page: 17
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib110
  article-title: Structure and mechanisms of SF1 DNA helicases
  publication-title: Adv. Exp. Med. Biol
  doi: 10.1007/978-1-4614-5037-5_2
– volume: 86
  start-page: 13598
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib202
  article-title: Severe acute respiratory syndrome coronavirus protein nsp1 is a novel eukaryotic translation inhibitor that represses multiple steps of translation initiation
  publication-title: J. Virol
  doi: 10.1128/JVI.01958-12
– volume: 40
  start-page: 1737
  year: 2012
  ident: 10.1074/jbc.REV120.013930_bib98
  article-title: The SARS-coronavirus nsp7+nsp8 complex is a unique multimeric RNA polymerase capable of both de novo initiation and primer extension
  publication-title: Nucleic Acids Res
  doi: 10.1093/nar/gkr893
– volume: 85
  start-page: 12201
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib294
  article-title: A double-inactivated severe acute respiratory syndrome coronavirus vaccine provides incomplete protection in mice and induces increased eosinophilic proinflammatory pulmonary response upon challenge
  publication-title: J. Virol
  doi: 10.1128/JVI.06048-11
– volume: 392
  start-page: 135
  year: 2005
  ident: 10.1074/jbc.REV120.013930_bib264
  article-title: Bcl-xL inhibits T-cell apoptosis induced by expression of SARS coronavirus E protein in the absence of growth factors
  publication-title: Biochem. J
  doi: 10.1042/BJ20050698
– volume: 181
  start-page: 1036
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib222
  article-title: Imbalanced host response to SARS-CoV-2 drives development of COVID-19
  publication-title: Cell
  doi: 10.1016/j.cell.2020.04.026
– volume: 62
  start-page: 4280
  year: 1988
  ident: 10.1074/jbc.REV120.013930_bib173
  article-title: Interactions between coronavirus nucleocapsid protein and viral RNAs: implications for viral transcription
  publication-title: J. Virol
  doi: 10.1128/jvi.62.11.4280-4287.1988
– volume: 96
  start-page: 59
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib298
  article-title: The nonstructural proteins directing coronavirus RNA synthesis and processing
  publication-title: Adv. Virus. Res
  doi: 10.1016/bs.aivir.2016.08.008
– volume: 80
  start-page: 785
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib205
  article-title: 7a protein of severe acute respiratory syndrome coronavirus inhibits cellular protein synthesis and activates p38 mitogen-activated protein kinase
  publication-title: J. Virol
  doi: 10.1128/JVI.80.2.785-793.2006
– volume: 84
  start-page: 7703
  year: 2010
  ident: 10.1074/jbc.REV120.013930_bib256
  article-title: Upregulation of the chemokine (C-C motif) ligand 2 via a severe acute respiratory syndrome coronavirus spike-ACE2 signaling pathway
  publication-title: J. Virol
  doi: 10.1128/JVI.02560-09
– volume: 6
  start-page: e19436
  year: 2011
  ident: 10.1074/jbc.REV120.013930_bib276
  article-title: SARS-CoV 9b protein diffuses into nucleus, undergoes active Crm1 mediated nucleocytoplasmic export and triggers apoptosis when retained in the nucleus
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0019436
– volume: 73
  start-page: 6862
  year: 1999
  ident: 10.1074/jbc.REV120.013930_bib153
  article-title: The putative helicase of the coronavirus mouse hepatitis virus is processed from the replicase gene polyprotein and localizes in complexes that are active in viral RNA synthesis
  publication-title: J. Virol
  doi: 10.1128/JVI.73.8.6862-6871.1999
– volume: 12
  start-page: e1005473
  year: 2016
  ident: 10.1074/jbc.REV120.013930_bib51
  article-title: High-resolution analysis of coronavirus gene expression by RNA sequencing and ribosome profiling
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1005473
– volume: 78
  start-page: 12557
  year: 2004
  ident: 10.1074/jbc.REV120.013930_bib158
  article-title: Generation of synthetic severe acute respiratory syndrome coronavirus pseudoparticles: implications for assembly and vaccine production
  publication-title: J. Virol
  doi: 10.1128/JVI.78.22.12557-12565.2004
– volume: 395
  start-page: 1054
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib221
  article-title: Clinical course and risk factors for mortality of adult inpatients with COVID-19 in Wuhan, China: a retrospective cohort study
  publication-title: Lancet
  doi: 10.1016/S0140-6736(20)30566-3
– volume: 81
  start-page: 8722
  year: 2007
  ident: 10.1074/jbc.REV120.013930_bib26
  article-title: Clathrin-dependent entry of severe acute respiratory syndrome coronavirus into target cells expressing ACE2 with the cytoplasmic tail deleted
  publication-title: J. Virol
  doi: 10.1128/JVI.00253-07
– volume: 4
  start-page: e1000054
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib152
  article-title: SARS-coronavirus replication/transcription complexes are membrane-protected and need a host factor for activity in vitro
  publication-title: PLoS Pathog
  doi: 10.1371/journal.ppat.1000054
– volume: 8
  start-page: e70548
  year: 2013
  ident: 10.1074/jbc.REV120.013930_bib100
  article-title: Regulation of coronaviral poly(A) tail length during infection
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0070548
– volume: 205
  start-page: 1601
  year: 2008
  ident: 10.1074/jbc.REV120.013930_bib227
  article-title: Length-dependent recognition of double-stranded ribonucleic acids by retinoic acid–inducible gene-I and melanoma differentiation–associated gene 5
  publication-title: J. Exp. Med
  doi: 10.1084/jem.20080091
– volume: 9
  start-page: 904
  year: 2018
  ident: 10.1074/jbc.REV120.013930_bib258
  article-title: SARS-coronavirus open reading frame-3a drives multimodal necrotic cell death
  publication-title: Cell Death Dis
  doi: 10.1038/s41419-018-0917-y
– volume: 66
  start-page: 3522
  year: 1992
  ident: 10.1074/jbc.REV120.013930_bib170
  article-title: Identification and characterization of a coronavirus packaging signal
  publication-title: J. Virol
  doi: 10.1128/jvi.66.6.3522-3530.1992
– volume: 11
  start-page: 1620
  year: 2020
  ident: 10.1074/jbc.REV120.013930_bib43
  article-title: Characterization of spike glycoprotein of SARS-CoV-2 on virus entry and its immune cross-reactivity with SARS-CoV
  publication-title: Nat. Commun
  doi: 10.1038/s41467-020-15562-9
– volume: 103
  start-page: 5108
  year: 2006
  ident: 10.1074/jbc.REV120.013930_bib112
  article-title: Discovery of an RNA virus 3′→5′ exoribonuclease that is critically involved in coronavirus RNA synthesis
  publication-title: Proc. Natl. Acad. Sci. U.S.A
  doi: 10.1073/pnas.0508200103
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Snippet Few human pathogens have been the focus of as much concentrated worldwide attention as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause...
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SubjectTerms Animals
Antigens, Viral - immunology
cellular immune response
coronavirus
Coronavirus - genetics
Coronavirus - immunology
Coronavirus - physiology
Coronavirus Infections - genetics
Coronavirus Infections - immunology
Coronavirus Infections - virology
endoplasmic reticulum
endoplasmic reticulum (ER)
Gene Expression Regulation, Viral
Host-Pathogen Interactions
Humans
innate immunity
JBC Reviews
pathogenesis
plus-stranded RNA virus
RNA polymerase
SARS-CoV-2
viral replication
virology
virus
virus entry
Virus Physiological Phenomena
Title The molecular virology of coronaviruses
URI https://dx.doi.org/10.1074/jbc.REV120.013930
https://www.ncbi.nlm.nih.gov/pubmed/32661197
https://www.proquest.com/docview/2442214577
https://pubmed.ncbi.nlm.nih.gov/PMC7489918
Volume 295
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