Structured illumination microscopy for super-resolution and optical sectioning

Optical microscopy plays an essential role in biological studies due to its capability and compatibility of non-contact, minimally invasive observation and mea- surement of live specimens. However, the conventional optical microscopy only has a spatial resolution about 200 nm due to the Abbe diffrac...

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Published inChinese science bulletin Vol. 59; no. 12; pp. 1291 - 1307
Main Authors Dan, Dan, Yao, Baoli, Lei, Ming
Format Journal Article
LanguageEnglish
Published Heidelberg Springer-Verlag 01.04.2014
Science China Press
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Online AccessGet full text
ISSN1001-6538
1861-9541
DOI10.1007/s11434-014-0181-1

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Abstract Optical microscopy plays an essential role in biological studies due to its capability and compatibility of non-contact, minimally invasive observation and mea- surement of live specimens. However, the conventional optical microscopy only has a spatial resolution about 200 nm due to the Abbe diffraction limit, and also lacks the ability of three-dimensional imaging. Super-resolution far- field optical microscopy based on special illumination schemes has been dramatically developed over the last decade. Among them, only the structured illumination microscopy (SIM) is of wide-field geometry that enables it easily compatible with the conventional optical microscope. In this article, the principle of SIM was introduced in terms of point spread function (PSF) and optical transform function (OTF) of the optical system. The SIM for super-resolution (SIM-SR) proposed by Gustafsson et al. and the SIM for optical sectioning (SIM-OS) pro- posed by Neil et al. are the most popular ones in the research community of microscopy. They have the same optical configuration, but with different data post- processing algorithms. We mathematically described the basic theories for both of the SIMs, respectively, and pre- sented some numerical simulations to show the effects of super-resolution and optical sectioning. Various approaches to generation of structured illumination patterns were reviewed. As an example, a SIM system based on DMD- modulation and LED-illumination was demonstrated. A lateral resolution of 90 nm was achieved with gold nanoparticles. The optical sectioning capability of the microscope was demonstrated with Golgi-stained mouse brain neurons, and the sectioning strength of 930 nm was obtained.
AbstractList Optical microscopy plays an essential role in biological studies due to its capability and compatibility of non-contact, minimally invasive observation and mea- surement of live specimens. However, the conventional optical microscopy only has a spatial resolution about 200 nm due to the Abbe diffraction limit, and also lacks the ability of three-dimensional imaging. Super-resolution far- field optical microscopy based on special illumination schemes has been dramatically developed over the last decade. Among them, only the structured illumination microscopy (SIM) is of wide-field geometry that enables it easily compatible with the conventional optical microscope. In this article, the principle of SIM was introduced in terms of point spread function (PSF) and optical transform function (OTF) of the optical system. The SIM for super-resolution (SIM-SR) proposed by Gustafsson et al. and the SIM for optical sectioning (SIM-OS) pro- posed by Neil et al. are the most popular ones in the research community of microscopy. They have the same optical configuration, but with different data post- processing algorithms. We mathematically described the basic theories for both of the SIMs, respectively, and pre- sented some numerical simulations to show the effects of super-resolution and optical sectioning. Various approaches to generation of structured illumination patterns were reviewed. As an example, a SIM system based on DMD- modulation and LED-illumination was demonstrated. A lateral resolution of 90 nm was achieved with gold nanoparticles. The optical sectioning capability of the microscope was demonstrated with Golgi-stained mouse brain neurons, and the sectioning strength of 930 nm was obtained.
Optical microscopy plays an essential role in biological studies due to its capability and compatibility of non-contact, minimally invasive observation and measurement of live specimens. However, the conventional optical microscopy only has a spatial resolution about 200 nm due to the Abbe diffraction limit, and also lacks the ability of three-dimensional imaging. Super-resolution far-field optical microscopy based on special illumination schemes has been dramatically developed over the last decade. Among them, only the structured illumination microscopy (SIM) is of wide-field geometry that enables it easily compatible with the conventional optical microscope. In this article, the principle of SIM was introduced in terms of point spread function (PSF) and optical transform function (OTF) of the optical system. The SIM for super-resolution (SIM-SR) proposed by Gustafsson et al. and the SIM for optical sectioning (SIM-OS) proposed by Neil et al. are the most popular ones in the research community of microscopy. They have the same optical configuration, but with different data post-processing algorithms. We mathematically described the basic theories for both of the SIMs, respectively, and presented some numerical simulations to show the effects of super-resolution and optical sectioning. Various approaches to generation of structured illumination patterns were reviewed. As an example, a SIM system based on DMD-modulation and LED-illumination was demonstrated. A lateral resolution of 90 nm was achieved with gold nano-particles. The optical sectioning capability of the microscope was demonstrated with Golgi-stained mouse brain neurons, and the sectioning strength of 930 nm was obtained.
Optical microscopy plays an essential role in biological studies due to its capability and compatibility of non-contact, minimally invasive observation and measurement of live specimens. However, the conventional optical microscopy only has a spatial resolution about 200 nm due to the Abbe diffraction limit, and also lacks the ability of three-dimensional imaging. Super-resolution far-field optical microscopy based on special illumination schemes has been dramatically developed over the last decade. Among them, only the structured illumination microscopy (SIM) is of wide-field geometry that enables it easily compatible with the conventional optical microscope. In this article, the principle of SIM was introduced in terms of point spread function ( PSF ) and optical transform function ( OTF ) of the optical system. The SIM for super-resolution (SIM-SR) proposed by Gustafsson et al. and the SIM for optical sectioning (SIM-OS) proposed by Neil et al. are the most popular ones in the research community of microscopy. They have the same optical configuration, but with different data post-processing algorithms. We mathematically described the basic theories for both of the SIMs, respectively, and presented some numerical simulations to show the effects of super-resolution and optical sectioning. Various approaches to generation of structured illumination patterns were reviewed. As an example, a SIM system based on DMD-modulation and LED-illumination was demonstrated. A lateral resolution of 90 nm was achieved with gold nano-particles. The optical sectioning capability of the microscope was demonstrated with Golgi-stained mouse brain neurons, and the sectioning strength of 930 nm was obtained.
Author Dan, Dan
Yao, Baoli
Lei, Ming
AuthorAffiliation State Key Laboratory of Transient Optics and Photonics, Xi'anInstitute of Optics and Precision Mechanics, Chinese Academyof Sciences, Xi'an 710119, China
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Super-resolution
Microscopy
Optical sectioning
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Notes Optical microscopy plays an essential role in biological studies due to its capability and compatibility of non-contact, minimally invasive observation and mea- surement of live specimens. However, the conventional optical microscopy only has a spatial resolution about 200 nm due to the Abbe diffraction limit, and also lacks the ability of three-dimensional imaging. Super-resolution far- field optical microscopy based on special illumination schemes has been dramatically developed over the last decade. Among them, only the structured illumination microscopy (SIM) is of wide-field geometry that enables it easily compatible with the conventional optical microscope. In this article, the principle of SIM was introduced in terms of point spread function (PSF) and optical transform function (OTF) of the optical system. The SIM for super-resolution (SIM-SR) proposed by Gustafsson et al. and the SIM for optical sectioning (SIM-OS) pro- posed by Neil et al. are the most popular ones in the research community of microscopy. They have the same optical configuration, but with different data post- processing algorithms. We mathematically described the basic theories for both of the SIMs, respectively, and pre- sented some numerical simulations to show the effects of super-resolution and optical sectioning. Various approaches to generation of structured illumination patterns were reviewed. As an example, a SIM system based on DMD- modulation and LED-illumination was demonstrated. A lateral resolution of 90 nm was achieved with gold nanoparticles. The optical sectioning capability of the microscope was demonstrated with Golgi-stained mouse brain neurons, and the sectioning strength of 930 nm was obtained.
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Microscopy ; Structured illumination ;Super-resolution ; Optical sectioning
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Snippet Optical microscopy plays an essential role in biological studies due to its capability and compatibility of non-contact, minimally invasive observation and...
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SubjectTerms Algorithms
brain
Chemistry/Food Science
Compatibility
digital images
Earth Sciences
Engineering
gold
Humanities and Social Sciences
Illumination
Invited Review
Life Sciences
lighting
Mathematical models
mice
Microscopy
multidisciplinary
Nanostructure
neurons
Optical microscopy
Optical sectioning
Physics
Science
Science (multidisciplinary)
SIM卡
光学传递函数
光学切片
光学显微镜
成像能力
结构照明
超分辨率
金纳米粒子
Title Structured illumination microscopy for super-resolution and optical sectioning
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