Loss of zebrafish pkd1l1 causes biliary defects that have implications for biliary atresia splenic malformation
Biliary atresia is a fibroinflammatory neonatal disease with no effective therapies. A subset of cases (10-20%) is associated with laterality defects - labeled biliary atresia splenic malformation (BASM) syndrome. Recently, whole-exome sequencing of patients with BASM identified deleterious variants...
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Published in | Disease models & mechanisms Vol. 16; no. 10 |
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Main Authors | , , , , , , , , |
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Language | English |
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01.10.2023
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Abstract | Biliary atresia is a fibroinflammatory neonatal disease with no effective therapies. A subset of cases (10-20%) is associated with laterality defects - labeled biliary atresia splenic malformation (BASM) syndrome. Recently, whole-exome sequencing of patients with BASM identified deleterious variants in PKD1L1. PKD1L1 is involved in left-right axis determination; however, its role in cholangiocytes is unknown. We generated the pkd1l1hsc117 allele using CRISPR/Cas9 mutagenesis in zebrafish to determine the role of Pkd1l1 in biliary development and function. Wild-type and mutant larvae were assessed for laterality defects, biliary function and biliary tree architecture at 5 days post fertilization. pkd1l1hsc117 mutant larvae exhibited early left-right patterning defects. The gallbladder was positioned on the left in 47% of mutants compared to 4% of wild-type larvae. Accumulation of PED6 in the gallbladder, an indicator of hepatobiliary function, was significantly reduced in pkd1l1hsc117 mutants (46%) compared to wild-type larvae (4%). pkd1l1hsc117 larvae exhibited fewer biliary epithelial cells and reduced density of the intrahepatic biliary network compared to those in wild-type larvae. These data highlight the essential role of pkd1l1 in normal development and function of the zebrafish biliary system, supporting a role for this gene as a cause of BASM. |
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AbstractList | Biliary atresia is a fibroinflammatory neonatal disease with no effective therapies. A subset of cases (10-20%) is associated with laterality defects – labeled biliary atresia splenic malformation (BASM) syndrome. Recently, whole-exome sequencing of patients with BASM identified deleterious variants in PKD1L1. PKD1L1 is involved in left-right axis determination; however, its role in cholangiocytes is unknown. We generated the pkd1l1hsc117 allele using CRISPR/Cas9 mutagenesis in zebrafish to determine the role of Pkd1l1 in biliary development and function. Wild-type and mutant larvae were assessed for laterality defects, biliary function and biliary tree architecture at 5 days post fertilization. pkd1l1hsc117 mutant larvae exhibited early left-right patterning defects. The gallbladder was positioned on the left in 47% of mutants compared to 4% of wild-type larvae. Accumulation of PED6 in the gallbladder, an indicator of hepatobiliary function, was significantly reduced in pkd1l1hsc117 mutants (46%) compared to wild-type larvae (4%). pkd1l1hsc117 larvae exhibited fewer biliary epithelial cells and reduced density of the intrahepatic biliary network compared to those in wild-type larvae. These data highlight the essential role of pkd1l1 in normal development and function of the zebrafish biliary system, supporting a role for this gene as a cause of BASM. Biliary atresia is a fibroinflammatory neonatal disease with no effective therapies. A subset of cases (10-20%) is associated with laterality defects – labeled biliary atresia splenic malformation (BASM) syndrome. Recently, whole-exome sequencing of patients with BASM identified deleterious variants in PKD1L1 . PKD1L1 is involved in left-right axis determination; however, its role in cholangiocytes is unknown. We generated the pkd1l1 hsc117 allele using CRISPR/Cas9 mutagenesis in zebrafish to determine the role of Pkd1l1 in biliary development and function. Wild-type and mutant larvae were assessed for laterality defects, biliary function and biliary tree architecture at 5 days post fertilization. pkd1l1 hsc117 mutant larvae exhibited early left-right patterning defects. The gallbladder was positioned on the left in 47% of mutants compared to 4% of wild-type larvae. Accumulation of PED6 in the gallbladder, an indicator of hepatobiliary function, was significantly reduced in pkd1l1 hsc117 mutants (46%) compared to wild-type larvae (4%). pkd1l1 hsc117 larvae exhibited fewer biliary epithelial cells and reduced density of the intrahepatic biliary network compared to those in wild-type larvae. These data highlight the essential role of pkd1l1 in normal development and function of the zebrafish biliary system, supporting a role for this gene as a cause of BASM. Summary: PKD1L1 -linked biliary atresia is a serious childhood liver disease with no effective therapies. Deletion of zebrafish pkd1l1 results in impaired function and abnormal development of bile ducts in the liver. Biliary atresia is a fibroinflammatory neonatal disease with no effective therapies. A subset of cases (10-20%) is associated with laterality defects - labeled biliary atresia splenic malformation (BASM) syndrome. Recently, whole-exome sequencing of patients with BASM identified deleterious variants in PKD1L1. PKD1L1 is involved in left-right axis determination; however, its role in cholangiocytes is unknown. We generated the pkd1l1hsc117 allele using CRISPR/Cas9 mutagenesis in zebrafish to determine the role of Pkd1l1 in biliary development and function. Wild-type and mutant larvae were assessed for laterality defects, biliary function and biliary tree architecture at 5 days post fertilization. pkd1l1hsc117 mutant larvae exhibited early left-right patterning defects. The gallbladder was positioned on the left in 47% of mutants compared to 4% of wild-type larvae. Accumulation of PED6 in the gallbladder, an indicator of hepatobiliary function, was significantly reduced in pkd1l1hsc117 mutants (46%) compared to wild-type larvae (4%). pkd1l1hsc117 larvae exhibited fewer biliary epithelial cells and reduced density of the intrahepatic biliary network compared to those in wild-type larvae. These data highlight the essential role of pkd1l1 in normal development and function of the zebrafish biliary system, supporting a role for this gene as a cause of BASM.Biliary atresia is a fibroinflammatory neonatal disease with no effective therapies. A subset of cases (10-20%) is associated with laterality defects - labeled biliary atresia splenic malformation (BASM) syndrome. Recently, whole-exome sequencing of patients with BASM identified deleterious variants in PKD1L1. PKD1L1 is involved in left-right axis determination; however, its role in cholangiocytes is unknown. We generated the pkd1l1hsc117 allele using CRISPR/Cas9 mutagenesis in zebrafish to determine the role of Pkd1l1 in biliary development and function. Wild-type and mutant larvae were assessed for laterality defects, biliary function and biliary tree architecture at 5 days post fertilization. pkd1l1hsc117 mutant larvae exhibited early left-right patterning defects. The gallbladder was positioned on the left in 47% of mutants compared to 4% of wild-type larvae. Accumulation of PED6 in the gallbladder, an indicator of hepatobiliary function, was significantly reduced in pkd1l1hsc117 mutants (46%) compared to wild-type larvae (4%). pkd1l1hsc117 larvae exhibited fewer biliary epithelial cells and reduced density of the intrahepatic biliary network compared to those in wild-type larvae. These data highlight the essential role of pkd1l1 in normal development and function of the zebrafish biliary system, supporting a role for this gene as a cause of BASM. |
Author | David-Rachel, Marie Ali, Rouknuddin Q Karpen, Saul J Ghanekar, Anand Ciruna, Brian Kamath, Binita M Meyer-Miner, Anne Wilkins, Benjamin J Lee, Fiona J H |
AuthorAffiliation | 3 Department of Pathology and Laboratory Medicine , The Children's Hospital of Philadelphia , Philadelphia, PA 19104 , USA 4 Department of Pediatrics Emory , University School of Medicine and Children's Healthcare of Atlanta , Atlanta, GA 30322 , USA 1 Program in Developmental & Stem Cell Biology , The Hospital for Sick Children , Toronto, ON M5G 0A4 , Canada 9 Department of Pediatrics , University of Toronto , Toronto, ON M5G 1X8 , Canada 8 Division of Gastroenterology , Hepatology and Nutrition, The Hospital for Sick Children , Toronto, ON M5G 1X8 , Canada 5 Division of General Surgery , University Health Network, Toronto, ON M5C 2C4 , Canada 6 Department of Surgery, The Hospital for Sick Children, Toronto, ON M5G 1X8 , Canada 7 Department of Surgery , University of Toronto , Toronto, ON M5T 1P5 , Canada 2 Department of Molecular Genetics , The University of Toronto , Toronto, ON M5S 1A8 , Canada |
AuthorAffiliation_xml | – name: 3 Department of Pathology and Laboratory Medicine , The Children's Hospital of Philadelphia , Philadelphia, PA 19104 , USA – name: 4 Department of Pediatrics Emory , University School of Medicine and Children's Healthcare of Atlanta , Atlanta, GA 30322 , USA – name: 9 Department of Pediatrics , University of Toronto , Toronto, ON M5G 1X8 , Canada – name: 1 Program in Developmental & Stem Cell Biology , The Hospital for Sick Children , Toronto, ON M5G 0A4 , Canada – name: 2 Department of Molecular Genetics , The University of Toronto , Toronto, ON M5S 1A8 , Canada – name: 5 Division of General Surgery , University Health Network, Toronto, ON M5C 2C4 , Canada – name: 7 Department of Surgery , University of Toronto , Toronto, ON M5T 1P5 , Canada – name: 8 Division of Gastroenterology , Hepatology and Nutrition, The Hospital for Sick Children , Toronto, ON M5G 1X8 , Canada – name: 6 Department of Surgery, The Hospital for Sick Children, Toronto, ON M5G 1X8 , Canada |
Author_xml | – sequence: 1 givenname: Rouknuddin Q orcidid: 0000-0002-8153-3268 surname: Ali fullname: Ali, Rouknuddin Q organization: Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada – sequence: 2 givenname: Anne surname: Meyer-Miner fullname: Meyer-Miner, Anne organization: Department of Molecular Genetics, The University of Toronto, Toronto, ON M5S 1A8, Canada – sequence: 3 givenname: Marie surname: David-Rachel fullname: David-Rachel, Marie organization: Department of Molecular Genetics, The University of Toronto, Toronto, ON M5S 1A8, Canada – sequence: 4 givenname: Fiona J H surname: Lee fullname: Lee, Fiona J H organization: Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, ON M5G 0A4, Canada – sequence: 5 givenname: Benjamin J surname: Wilkins fullname: Wilkins, Benjamin J organization: Department of Pathology and Laboratory Medicine, The Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA – sequence: 6 givenname: Saul J surname: Karpen fullname: Karpen, Saul J organization: Department of Pediatrics Emory, University School of Medicine and Children's Healthcare of Atlanta, Atlanta, GA 30322, USA – sequence: 7 givenname: Brian surname: Ciruna fullname: Ciruna, Brian organization: Department of Molecular Genetics, The University of Toronto, Toronto, ON M5S 1A8, Canada – sequence: 8 givenname: Anand surname: Ghanekar fullname: Ghanekar, Anand organization: Department of Surgery, University of Toronto, Toronto, ON M5T 1P5, Canada – sequence: 9 givenname: Binita M orcidid: 0000-0002-9982-5023 surname: Kamath fullname: Kamath, Binita M organization: Department of Pediatrics, University of Toronto, Toronto, ON M5G 1X8, Canada |
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Cites_doi | 10.1016/j.chemosphere.2020.126609 10.1097/MPG.0b013e318296e525 10.1016/j.chemosphere.2018.09.013 10.1177/0300985809353553 10.1371/journal.pone.0150188 10.1038/s41431-018-0307-z 10.1007/s40139-014-0040-4 10.1016/j.cub.2004.02.042 10.1371/journal.pbio.0020030 10.1038/nature12833 10.1159/000324121 10.1002/hep.26512 10.1006/dbio.1999.9406 10.1038/ncb2042 10.1242/dev.01663 10.1016/j.scitotenv.2020.140081 10.1371/journal.pgen.1006070 10.1242/dev.058271 10.1126/science.1060418 10.1002/dvdy.21530 10.1002/hep.30515 10.1093/bioinformatics/bts199 10.1097/HEP.0000000000000029 10.1002/dvdy.22143 10.1097/MPG.0000000000001375 10.1016/j.jpedsurg.2012.04.008 10.1038/nature12832 10.1055/s-0032-1329899 10.1016/j.ecoenv.2020.110876 10.1016/j.ebiom.2021.103530 10.1016/j.ydbio.2010.12.041 10.1002/dvdy.21407 10.1242/dev.058149 10.1242/dev.119.4.1203 10.1016/j.ajhg.2016.07.011 10.1101/cshperspect.a028191 10.3389/fcell.2017.00005 10.1093/nar/gkw398 10.1016/j.devcel.2015.10.015 10.1093/nar/gku410 |
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Keywords | Ciliopathy PED6 CRISPR/Cas9 Laterality Bile duct |
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References | Batista-Silva (2023101107541006500_DMM049326C3) 2020; 202 England (2023101107541006500_DMM049326C14) 2017; 5 LaRusso (2023101107541006500_DMM049326C25) 2011; 29 Derikvandy (2023101107541006500_DMM049326C13) 2020; 251 Grimes (2023101107541006500_DMM049326C18) 2016; 12 Kearse (2023101107541006500_DMM049326C22) 2012; 28 Essner (2023101107541006500_DMM049326C15) 2005; 132 Parant (2023101107541006500_DMM049326C32) 2009; 238 Chen (2023101107541006500_DMM049326C7) 2004; 14 Masyuk (2023101107541006500_DMM049326C28) 2008; 237 Montague (2023101107541006500_DMM049326C31) 2014; 42 Braun (2023101107541006500_DMM049326C6) 2017; 9 Farber (2023101107541006500_DMM049326C16) 2001; 292 Cheng (2023101107541006500_DMM049326C8) 2004; 2 Borovina (2023101107541006500_DMM049326C5) 2010; 12 Vogel (2023101107541006500_DMM049326C39) 2010; 47 DeCaen (2023101107541006500_DMM049326C11) 2013; 504 Matthews (2023101107541006500_DMM049326C29) 2008; 237 Hellen (2023101107541006500_DMM049326C19) 2023; 77 Rangasamy (2023101107541006500_DMM049326C33) 2018; 213 Karjoo (2023101107541006500_DMM049326C21) 2013; 57 Labun (2023101107541006500_DMM049326C23) 2016; 44 Sheflin-Findling (2023101107541006500_DMM049326C35) 2012; 47 Cofer (2023101107541006500_DMM049326C9) 2014; 2 Schwarz (2023101107541006500_DMM049326C34) 2013; 58 Armstrong (2023101107541006500_DMM049326C1) 2016; 11 Bao (2023101107541006500_DMM049326C2) 2020; 739 Vetrini (2023101107541006500_DMM049326C38) 2016; 99 Kamura (2023101107541006500_DMM049326C20) 2011; 138 Li (2023101107541006500_DMM049326C26) 2019; 27 Mick (2023101107541006500_DMM049326C30) 2015; 35 Tang (2023101107541006500_DMM049326C36) 2016; 63 Thisse (2023101107541006500_DMM049326C37) 1993; 119 Field (2023101107541006500_DMM049326C17) 2011; 138 Yelon (2023101107541006500_DMM049326C40) 1999; 214 Cui (2023101107541006500_DMM049326C10) 2011; 351 Mack (2023101107541006500_DMM049326C27) 2012; 32 Berauer (2023101107541006500_DMM049326C4) 2019; 70 Delling (2023101107541006500_DMM049326C12) 2013; 504 Lam (2023101107541006500_DMM049326C24) 2021; 71 |
References_xml | – volume: 251 start-page: 126609 year: 2020 ident: 2023101107541006500_DMM049326C13 article-title: Genotoxicity and oxidative damage in zebrafish (Danio rerio) after exposure to effluent from ethyl alcohol industry publication-title: Chemosphere doi: 10.1016/j.chemosphere.2020.126609 contributor: fullname: Derikvandy – volume: 57 start-page: 96 year: 2013 ident: 2023101107541006500_DMM049326C21 article-title: Extrahepatic cholangiocyte cilia are abnormal in biliary atresia publication-title: J. Pediatr. Gastroenterol. Nutr. doi: 10.1097/MPG.0b013e318296e525 contributor: fullname: Karjoo – volume: 213 start-page: 423 year: 2018 ident: 2023101107541006500_DMM049326C33 article-title: Developmental toxicity and biological responses of zebrafish (Danio rerio) exposed to anti-inflammatory drug ketoprofen publication-title: Chemosphere doi: 10.1016/j.chemosphere.2018.09.013 contributor: fullname: Rangasamy – volume: 47 start-page: 120 year: 2010 ident: 2023101107541006500_DMM049326C39 article-title: Situs inversus in Dpcd/Poll-/-, Nme7–/-, and Pkd1l1-/- mice publication-title: Vet. Pathol. doi: 10.1177/0300985809353553 contributor: fullname: Vogel – volume: 11 start-page: e0150188 year: 2016 ident: 2023101107541006500_DMM049326C1 article-title: Homology directed knockin of point mutations in the zebrafish tardbp and fus genes in ALS using the CRISPR/Cas9 system publication-title: PLoS One doi: 10.1371/journal.pone.0150188 contributor: fullname: Armstrong – volume: 27 start-page: 563 year: 2019 ident: 2023101107541006500_DMM049326C26 article-title: Genetic architecture of laterality defects revealed by whole exome sequencing publication-title: Eur. J. Hum. Genet. doi: 10.1038/s41431-018-0307-z contributor: fullname: Li – volume: 2 start-page: 75 year: 2014 ident: 2023101107541006500_DMM049326C9 article-title: Zebrafish models of biliary atresia and other infantile cholestatic diseases publication-title: Curr. Pathobiol. Rep. doi: 10.1007/s40139-014-0040-4 contributor: fullname: Cofer – volume: 14 start-page: 618 year: 2004 ident: 2023101107541006500_DMM049326C7 article-title: Two modes by which Lefty proteins inhibit nodal signaling publication-title: Curr. Biol. doi: 10.1016/j.cub.2004.02.042 contributor: fullname: Chen – volume: 2 start-page: E30 year: 2004 ident: 2023101107541006500_DMM049326C8 article-title: Lefty blocks a subset of TGFbeta signals by antagonizing EGF-CFC coreceptors publication-title: PLoS Biol. doi: 10.1371/journal.pbio.0020030 contributor: fullname: Cheng – volume: 504 start-page: 311 year: 2013 ident: 2023101107541006500_DMM049326C12 article-title: Primary cilia are specialized calcium signalling organelles publication-title: Nature doi: 10.1038/nature12833 contributor: fullname: Delling – volume: 29 start-page: 6 year: 2011 ident: 2023101107541006500_DMM049326C25 article-title: The role of cilia in the regulation of bile flow publication-title: Dig. Dis. doi: 10.1159/000324121 contributor: fullname: LaRusso – volume: 58 start-page: 1724 year: 2013 ident: 2023101107541006500_DMM049326C34 article-title: Extrahepatic anomalies in infants with biliary atresia: results of a large prospective North American multicenter study publication-title: Hepatology doi: 10.1002/hep.26512 contributor: fullname: Schwarz – volume: 214 start-page: 23 year: 1999 ident: 2023101107541006500_DMM049326C40 article-title: Restricted expression of cardiac myosin genes reveals regulated aspects of heart tube assembly in zebrafish publication-title: Dev. Biol. doi: 10.1006/dbio.1999.9406 contributor: fullname: Yelon – volume: 12 start-page: 407 year: 2010 ident: 2023101107541006500_DMM049326C5 article-title: Vangl2 directs the posterior tilting and asymmetric localization of motile primary cilia publication-title: Nat. Cell Biol. doi: 10.1038/ncb2042 contributor: fullname: Borovina – volume: 132 start-page: 1247 year: 2005 ident: 2023101107541006500_DMM049326C15 article-title: Kupffer's vesicle is a ciliated organ of asymmetry in the zebrafish embryo that initiates left-right development of the brain, heart and gut publication-title: Development doi: 10.1242/dev.01663 contributor: fullname: Essner – volume: 739 start-page: 140081 year: 2020 ident: 2023101107541006500_DMM049326C2 article-title: Sub-chronic carbendazim exposure induces hepatic glycolipid metabolism disorder accompanied by gut microbiota dysbiosis in adult zebrafish (Daino rerio) publication-title: Sci. Total Environ. doi: 10.1016/j.scitotenv.2020.140081 contributor: fullname: Bao – volume: 12 start-page: e1006070 year: 2016 ident: 2023101107541006500_DMM049326C18 article-title: Genetic analysis reveals a hierarchy of interactions between polycystin-encoding genes and genes controlling cilia function during left-right determination publication-title: PLoS Genet. doi: 10.1371/journal.pgen.1006070 contributor: fullname: Grimes – volume: 138 start-page: 1121 year: 2011 ident: 2023101107541006500_DMM049326C20 article-title: Pkd1l1 complexes with Pkd2 on motile cilia and functions to establish the left-right axis publication-title: Development doi: 10.1242/dev.058271 contributor: fullname: Kamura – volume: 292 start-page: 1385 year: 2001 ident: 2023101107541006500_DMM049326C16 article-title: Genetic analysis of digestive physiology using fluorescent phospholipid reporters publication-title: Science doi: 10.1126/science.1060418 contributor: fullname: Farber – volume: 237 start-page: 2007 year: 2008 ident: 2023101107541006500_DMM049326C28 article-title: Cholangiocyte primary cilia in liver health and disease publication-title: Dev. Dyn. doi: 10.1002/dvdy.21530 contributor: fullname: Masyuk – volume: 70 start-page: 899 year: 2019 ident: 2023101107541006500_DMM049326C4 article-title: Identification of polycystic kidney disease 1 like 1 gene variants in children with biliary atresia splenic malformation syndrome publication-title: Hepatology doi: 10.1002/hep.30515 contributor: fullname: Berauer – volume: 28 start-page: 1647 year: 2012 ident: 2023101107541006500_DMM049326C22 article-title: Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data publication-title: Bioinformatics doi: 10.1093/bioinformatics/bts199 contributor: fullname: Kearse – volume: 77 start-page: 1274 year: 2023 ident: 2023101107541006500_DMM049326C19 article-title: Liver-restricted deletion of the biliary atresia candidate gene Pkd1l1 causes bile duct dysmorphogenesis and ciliopathy publication-title: Hepatology doi: 10.1097/HEP.0000000000000029 contributor: fullname: Hellen – volume: 238 start-page: 3168 year: 2009 ident: 2023101107541006500_DMM049326C32 article-title: A rapid and efficient method of genotyping zebrafish mutants publication-title: Dev. Dyn. doi: 10.1002/dvdy.22143 contributor: fullname: Parant – volume: 63 start-page: 524 year: 2016 ident: 2023101107541006500_DMM049326C36 article-title: Loss of a candidate biliary atresia susceptibility gene, add3a, causes biliary developmental defects in Zebrafish publication-title: J. Pediatr. Gastroenterol. Nutr. doi: 10.1097/MPG.0000000000001375 contributor: fullname: Tang – volume: 47 start-page: 1453 year: 2012 ident: 2023101107541006500_DMM049326C35 article-title: Partial internal biliary diversion for Alagille syndrome: case report and review of the literature publication-title: J. Pediatr. Surg. doi: 10.1016/j.jpedsurg.2012.04.008 contributor: fullname: Sheflin-Findling – volume: 504 start-page: 315 year: 2013 ident: 2023101107541006500_DMM049326C11 article-title: Direct recording and molecular identification of the calcium channel of primary cilia publication-title: Nature doi: 10.1038/nature12832 contributor: fullname: DeCaen – volume: 32 start-page: 307 year: 2012 ident: 2023101107541006500_DMM049326C27 article-title: Clues to the etiology of bile duct injury in biliary atresia publication-title: Semin. Liver Dis. doi: 10.1055/s-0032-1329899 contributor: fullname: Mack – volume: 202 start-page: 110876 year: 2020 ident: 2023101107541006500_DMM049326C3 article-title: Role of bisphenol A on calcium influx and its potential toxicity on the testis of Danio rerio publication-title: Ecotoxicol. Environ. Saf. doi: 10.1016/j.ecoenv.2020.110876 contributor: fullname: Batista-Silva – volume: 71 start-page: 103530 year: 2021 ident: 2023101107541006500_DMM049326C24 article-title: Identification of a wide spectrum of ciliary gene mutations in nonsyndromic biliary atresia patients implicates ciliary dysfunction as a novel disease mechanism publication-title: EBioMedicine doi: 10.1016/j.ebiom.2021.103530 contributor: fullname: Lam – volume: 351 start-page: 229 year: 2011 ident: 2023101107541006500_DMM049326C10 article-title: Disruption of planar cell polarity activity leads to developmental biliary defects publication-title: Dev. Biol. doi: 10.1016/j.ydbio.2010.12.041 contributor: fullname: Cui – volume: 237 start-page: 124 year: 2008 ident: 2023101107541006500_DMM049326C29 article-title: Transcription factor onecut3 regulates intrahepatic biliary development in zebrafish publication-title: Dev. Dyn. doi: 10.1002/dvdy.21407 contributor: fullname: Matthews – volume: 138 start-page: 1131 year: 2011 ident: 2023101107541006500_DMM049326C17 article-title: Pkd1l1 establishes left-right asymmetry and physically interacts with Pkd2 publication-title: Development doi: 10.1242/dev.058149 contributor: fullname: Field – volume: 119 start-page: 1203 year: 1993 ident: 2023101107541006500_DMM049326C37 article-title: Structure of the zebrafish snail1 gene and its expression in wild-type, spadetail and no tail mutant embryos publication-title: Development doi: 10.1242/dev.119.4.1203 contributor: fullname: Thisse – volume: 99 start-page: 886 year: 2016 ident: 2023101107541006500_DMM049326C38 article-title: Bi-allelic mutations in PKD1L1 are associated with laterality defects in humans publication-title: Am. J. Hum. Genet. doi: 10.1016/j.ajhg.2016.07.011 contributor: fullname: Vetrini – volume: 9 start-page: a028191 year: 2017 ident: 2023101107541006500_DMM049326C6 article-title: Ciliopathies publication-title: Cold Spring Harb. Perspect Biol. doi: 10.1101/cshperspect.a028191 contributor: fullname: Braun – volume: 5 start-page: 5 year: 2017 ident: 2023101107541006500_DMM049326C14 article-title: Identification and expression analysis of the complete family of Zebrafish pkd genes publication-title: Front. Cell Dev. Biol. doi: 10.3389/fcell.2017.00005 contributor: fullname: England – volume: 44 start-page: W272 year: 2016 ident: 2023101107541006500_DMM049326C23 article-title: CHOPCHOP v2: a web tool for the next generation of CRISPR genome engineering publication-title: Nucleic Acids Res. doi: 10.1093/nar/gkw398 contributor: fullname: Labun – volume: 35 start-page: 497 year: 2015 ident: 2023101107541006500_DMM049326C30 article-title: Proteomics of primary cilia by proximity labeling publication-title: Dev. Cell doi: 10.1016/j.devcel.2015.10.015 contributor: fullname: Mick – volume: 42 start-page: W401 year: 2014 ident: 2023101107541006500_DMM049326C31 article-title: CHOPCHOP: a CRISPR/Cas9 and TALEN web tool for genome editing publication-title: Nucleic Acids Res. doi: 10.1093/nar/gku410 contributor: fullname: Montague |
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SubjectTerms | Abnormalities, Multiple Animals bile duct Biliary Atresia Biliary Tract ciliopathy crispr/cas9 laterality Membrane Proteins - genetics ped6 Spleen Zebrafish - genetics |
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Title | Loss of zebrafish pkd1l1 causes biliary defects that have implications for biliary atresia splenic malformation |
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