Collecting baleen whale blow samples by drone: A minimally intrusive tool for conservation genetics

In coastal British Columbia, Canada, marine megafauna such as humpback whales (Megaptera novaeangliae) and fin whales (Balaenoptera physalus velifera) have been subject to a history of exploitation and near extirpation. While their populations have been in recovery, significant threats are posed to...

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Published inMolecular ecology resources Vol. 24; no. 8; pp. e13957 - n/a
Main Authors O'Mahony, Éadin N., Sremba, Angela L., Keen, Eric M., Robinson, Nicole, Dundas, Archie, Steel, Debbie, Wray, Janie, Baker, C. Scott, Gaggiotti, Oscar E.
Format Journal Article
LanguageEnglish
Published England Wiley Subscription Services, Inc 01.11.2024
Subjects
Anthropogenic factors
Aquatic mammals
Balaenoptera physalus
baleen whales
Biopsy
British Columbia
Cetacea
Climate change
Compounding effects
condensates
Conservation
Conservation genetics
Deoxyribonucleic acid
DNA
drones
ecology
fauna
Genetic diversity
genetic variation
Genetics
genotyping
Haplotypes
Megafauna
Megaptera novaeangliae
microsatellite repeats
mitochondria
Mitochondrial DNA
Natural resources
Population genetics
respiratory blow
Sampling
Sampling methods
Sex
Threatened species
unoccupied aerial systems
vulnerable species
Whales
Whales & whaling
British Columbia
respiratory blow
unoccupied aerial systems
baleen whales
drones
conservation genetics
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Abstract In coastal British Columbia, Canada, marine megafauna such as humpback whales (Megaptera novaeangliae) and fin whales (Balaenoptera physalus velifera) have been subject to a history of exploitation and near extirpation. While their populations have been in recovery, significant threats are posed to these vulnerable species by proposed natural resource ventures in this region, in addition to the compounding effects of anthropogenic climate change. Genetic tools play a vital role in informing conservation efforts, but the associated collection of tissue biopsy samples can be challenging for the investigators and disruptive to the ongoing behaviour of the targeted whales. Here, we evaluate a minimally intrusive approach based on collecting exhaled breath condensate, or respiratory ‘blow’ samples, from baleen whales using an unoccupied aerial system (UAS), within Gitga'at First Nation territory for conservation genetics. Minimal behavioural responses to the sampling technique were observed, with no response detected 87% of the time (of 112 UAS deployments). DNA from whale blow (n = 88 samples) was extracted, and DNA profiles consisting of 10 nuclear microsatellite loci, sex identification and mitochondrial (mt) DNA haplotypes were constructed. An average of 7.5 microsatellite loci per individual were successfully genotyped. The success rates for mtDNA and sex assignment were 80% and 89% respectively. Thus, this minimally intrusive sampling method can be used to describe genetic diversity and generate genetic profiles for individual identification. The results of this research demonstrate the potential of UAS‐collected whale blow for conservation genetics from a remote location. see also the Perspective by Elena Valsecchi.
AbstractList In coastal British Columbia, Canada, marine megafauna such as humpback whales (Megaptera novaeangliae) and fin whales (Balaenoptera physalus velifera) have been subject to a history of exploitation and near extirpation. While their populations have been in recovery, significant threats are posed to these vulnerable species by proposed natural resource ventures in this region, in addition to the compounding effects of anthropogenic climate change. Genetic tools play a vital role in informing conservation efforts, but the associated collection of tissue biopsy samples can be challenging for the investigators and disruptive to the ongoing behaviour of the targeted whales. Here, we evaluate a minimally intrusive approach based on collecting exhaled breath condensate, or respiratory 'blow' samples, from baleen whales using an unoccupied aerial system (UAS), within Gitga'at First Nation territory for conservation genetics. Minimal behavioural responses to the sampling technique were observed, with no response detected 87% of the time (of 112 UAS deployments). DNA from whale blow (n = 88 samples) was extracted, and DNA profiles consisting of 10 nuclear microsatellite loci, sex identification and mitochondrial (mt) DNA haplotypes were constructed. An average of 7.5 microsatellite loci per individual were successfully genotyped. The success rates for mtDNA and sex assignment were 80% and 89% respectively. Thus, this minimally intrusive sampling method can be used to describe genetic diversity and generate genetic profiles for individual identification. The results of this research demonstrate the potential of UAS-collected whale blow for conservation genetics from a remote location.
In coastal British Columbia, Canada, marine megafauna such as humpback whales ( Megaptera novaeangliae ) and fin whales ( Balaenoptera physalus velifera ) have been subject to a history of exploitation and near extirpation. While their populations have been in recovery, significant threats are posed to these vulnerable species by proposed natural resource ventures in this region, in addition to the compounding effects of anthropogenic climate change. Genetic tools play a vital role in informing conservation efforts, but the associated collection of tissue biopsy samples can be challenging for the investigators and disruptive to the ongoing behaviour of the targeted whales. Here, we evaluate a minimally intrusive approach based on collecting exhaled breath condensate, or respiratory ‘blow’ samples, from baleen whales using an unoccupied aerial system (UAS), within Gitga'at First Nation territory for conservation genetics. Minimal behavioural responses to the sampling technique were observed, with no response detected 87% of the time (of 112 UAS deployments). DNA from whale blow ( n  = 88 samples) was extracted, and DNA profiles consisting of 10 nuclear microsatellite loci, sex identification and mitochondrial (mt) DNA haplotypes were constructed. An average of 7.5 microsatellite loci per individual were successfully genotyped. The success rates for mtDNA and sex assignment were 80% and 89% respectively. Thus, this minimally intrusive sampling method can be used to describe genetic diversity and generate genetic profiles for individual identification. The results of this research demonstrate the potential of UAS‐collected whale blow for conservation genetics from a remote location. see also the Perspective by Elena Valsecchi.
In coastal British Columbia, Canada, marine megafauna such as humpback whales (Megaptera novaeangliae) and fin whales (Balaenoptera physalus velifera) have been subject to a history of exploitation and near extirpation. While their populations have been in recovery, significant threats are posed to these vulnerable species by proposed natural resource ventures in this region, in addition to the compounding effects of anthropogenic climate change. Genetic tools play a vital role in informing conservation efforts, but the associated collection of tissue biopsy samples can be challenging for the investigators and disruptive to the ongoing behaviour of the targeted whales. Here, we evaluate a minimally intrusive approach based on collecting exhaled breath condensate, or respiratory ‘blow’ samples, from baleen whales using an unoccupied aerial system (UAS), within Gitga'at First Nation territory for conservation genetics. Minimal behavioural responses to the sampling technique were observed, with no response detected 87% of the time (of 112 UAS deployments). DNA from whale blow (n = 88 samples) was extracted, and DNA profiles consisting of 10 nuclear microsatellite loci, sex identification and mitochondrial (mt) DNA haplotypes were constructed. An average of 7.5 microsatellite loci per individual were successfully genotyped. The success rates for mtDNA and sex assignment were 80% and 89% respectively. Thus, this minimally intrusive sampling method can be used to describe genetic diversity and generate genetic profiles for individual identification. The results of this research demonstrate the potential of UAS‐collected whale blow for conservation genetics from a remote location. see also the Perspective by Elena Valsecchi.
In coastal British Columbia, Canada, marine megafauna such as humpback whales (Megaptera novaeangliae) and fin whales (Balaenoptera physalus velifera) have been subject to a history of exploitation and near extirpation. While their populations have been in recovery, significant threats are posed to these vulnerable species by proposed natural resource ventures in this region, in addition to the compounding effects of anthropogenic climate change. Genetic tools play a vital role in informing conservation efforts, but the associated collection of tissue biopsy samples can be challenging for the investigators and disruptive to the ongoing behaviour of the targeted whales. Here, we evaluate a minimally intrusive approach based on collecting exhaled breath condensate, or respiratory 'blow' samples, from baleen whales using an unoccupied aerial system (UAS), within Gitga'at First Nation territory for conservation genetics. Minimal behavioural responses to the sampling technique were observed, with no response detected 87% of the time (of 112 UAS deployments). DNA from whale blow (n = 88 samples) was extracted, and DNA profiles consisting of 10 nuclear microsatellite loci, sex identification and mitochondrial (mt) DNA haplotypes were constructed. An average of 7.5 microsatellite loci per individual were successfully genotyped. The success rates for mtDNA and sex assignment were 80% and 89% respectively. Thus, this minimally intrusive sampling method can be used to describe genetic diversity and generate genetic profiles for individual identification. The results of this research demonstrate the potential of UAS-collected whale blow for conservation genetics from a remote location.In coastal British Columbia, Canada, marine megafauna such as humpback whales (Megaptera novaeangliae) and fin whales (Balaenoptera physalus velifera) have been subject to a history of exploitation and near extirpation. While their populations have been in recovery, significant threats are posed to these vulnerable species by proposed natural resource ventures in this region, in addition to the compounding effects of anthropogenic climate change. Genetic tools play a vital role in informing conservation efforts, but the associated collection of tissue biopsy samples can be challenging for the investigators and disruptive to the ongoing behaviour of the targeted whales. Here, we evaluate a minimally intrusive approach based on collecting exhaled breath condensate, or respiratory 'blow' samples, from baleen whales using an unoccupied aerial system (UAS), within Gitga'at First Nation territory for conservation genetics. Minimal behavioural responses to the sampling technique were observed, with no response detected 87% of the time (of 112 UAS deployments). DNA from whale blow (n = 88 samples) was extracted, and DNA profiles consisting of 10 nuclear microsatellite loci, sex identification and mitochondrial (mt) DNA haplotypes were constructed. An average of 7.5 microsatellite loci per individual were successfully genotyped. The success rates for mtDNA and sex assignment were 80% and 89% respectively. Thus, this minimally intrusive sampling method can be used to describe genetic diversity and generate genetic profiles for individual identification. The results of this research demonstrate the potential of UAS-collected whale blow for conservation genetics from a remote location.
Author Gaggiotti, Oscar E.
Robinson, Nicole
Steel, Debbie
O'Mahony, Éadin N.
Keen, Eric M.
Baker, C. Scott
Wray, Janie
Dundas, Archie
Sremba, Angela L.
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  organization: North Coast Cetacean Society
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  organization: Oregon State University
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  givenname: Nicole
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  organization: Gitga'at Oceans and Lands Department
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  givenname: Oscar E.
  surname: Gaggiotti
  fullname: Gaggiotti, Oscar E.
  organization: University of St Andrews
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Keywords respiratory blow
unoccupied aerial systems
baleen whales
drones
conservation genetics
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1996; 12
2007; 16
2016; 11
2017; 51
2016; 4
2018; 18
2006; 41
2022; 3
1984; 38
2022; 6
2022; 7
2019; 45
1998; 7
2014; 30
1990; 8
2012; 42
1990; 6
1998; 8
2017; 2
2017; 4
2000; 9
2000; 50
2019; 366
2008; 8
2008; 4
2017; 232
2015; 45
1992; 90
2021; 38
2021; 37
2014; 4
2020; 2
2001
1997; 14
2020; 46
2011; 11 Suppl 1
2011; 28
2014; 9
1996; 5
2012; 64
2001; 10
2009; 25
2018; 140
2021; 3
2015; 3
2023; 18
2010
2006; 15
2015; 10
2009
2008
2006; 6
2006
2005
2020; 584
1999; 8
2017; 108
2021; 16
2003; 426
2004; 19
2017; 17
1997; 75
2021
2020
2017; 12
2019
2018
2017
2020; 68
2016
2013; 494
2012; 7
2012; 5
2007; 48
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e_1_2_10_87_1
e_1_2_10_26_1
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e_1_2_10_23_1
e_1_2_10_46_1
e_1_2_10_69_1
e_1_2_10_42_1
e_1_2_10_110_1
e_1_2_10_91_1
e_1_2_10_72_1
e_1_2_10_95_1
e_1_2_10_118_1
e_1_2_10_4_1
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e_1_2_10_99_1
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Snippet In coastal British Columbia, Canada, marine megafauna such as humpback whales (Megaptera novaeangliae) and fin whales (Balaenoptera physalus velifera) have...
In coastal British Columbia, Canada, marine megafauna such as humpback whales ( Megaptera novaeangliae ) and fin whales ( Balaenoptera physalus velifera ) have...
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StartPage e13957
SubjectTerms Anthropogenic factors
Aquatic mammals
Balaenoptera physalus
baleen whales
Biopsy
British Columbia
Cetacea
Climate change
Compounding effects
condensates
Conservation
Conservation genetics
Deoxyribonucleic acid
DNA
drones
ecology
fauna
Genetic diversity
genetic variation
Genetics
genotyping
Haplotypes
Megafauna
Megaptera novaeangliae
microsatellite repeats
mitochondria
Mitochondrial DNA
Natural resources
Population genetics
respiratory blow
Sampling
Sampling methods
Sex
Threatened species
unoccupied aerial systems
vulnerable species
Whales
Whales & whaling
Title Collecting baleen whale blow samples by drone: A minimally intrusive tool for conservation genetics
URI https://onlinelibrary.wiley.com/doi/abs/10.1111%2F1755-0998.13957
https://www.ncbi.nlm.nih.gov/pubmed/38576153
https://www.proquest.com/docview/3111908192
https://www.proquest.com/docview/3034243837
https://www.proquest.com/docview/3154178841
Volume 24
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