Enumeration of Vibrio parahaemolyticus in the viable but nonculturable state using direct plate counts and recognition of individual gene fluorescence in situ hybridization
Vibrio parahaemolyticus is a gram-negative, halophilic bacterium indigenous to marine and estuarine environments and it is capable of causing food and water-borne illness in humans. It can also cause disease in marine animals, including cultured species. Currently, culture-based techniques are used...
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Published in | Journal of microbiological methods Vol. 85; no. 2; pp. 114 - 118 |
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Main Authors | , , , |
Format | Journal Article |
Language | English |
Published |
Amsterdam
Elsevier B.V
01.05.2011
Elsevier |
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Abstract | Vibrio parahaemolyticus is a gram-negative, halophilic bacterium indigenous to marine and estuarine environments and it is capable of causing food and water-borne illness in humans. It can also cause disease in marine animals, including cultured species. Currently, culture-based techniques are used for quantification of
V. parahaemolyticus in environmental samples; however, these can be misleading as they fail to detect
V. parahaemolyticus in a viable but nonculturable (VBNC) state which leads to an underestimation of the population density. In this study, we used a novel fluorescence visualization technique, called recognition of individual gene fluorescence
in situ hybridization (RING-FISH), which targets chromosomal DNA for enumeration. A polynucleotide probe labeled with Cyanine 3 (Cy3) was created corresponding to the ubiquitous
V. parahaemolyticus gene that codes for thermolabile hemolysin (
tlh). When coupled with the Kogure method to distinguish viable from dead cells, RING-FISH probes reliably enumerated total, viable
V. parahaemolyticus. The probe was tested for sensitivity and specificity against a pure culture of
tlh
+
,
tdh
−
,
trh
−
V. parahaemolyticus, pure cultures of
Vibrio vulnificus,
Vibrio harveyi,
Vibrio alginolyticus and
Vibrio fischeri, and a mixed environmental sample. This research will provide additional tools for a better understanding of the risk these environmental organisms pose to human health. |
---|---|
AbstractList | Vibrio parahaemolyticus is a gram-negative, halophilic bacterium indigenous to marine and estuarine environments and it is capable of causing food and water-borne illness in humans. It can also cause disease in marine animals, including cultured species. Currently, culture-based techniques are used for quantification of
V. parahaemolyticus in environmental samples; however, these can be misleading as they fail to detect
V. parahaemolyticus in a viable but nonculturable (VBNC) state which leads to an underestimation of the population density. In this study, we used a novel fluorescence visualization technique, called recognition of individual gene fluorescence
in situ hybridization (RING-FISH), which targets chromosomal DNA for enumeration. A polynucleotide probe labeled with Cyanine 3 (Cy3) was created corresponding to the ubiquitous
V. parahaemolyticus gene that codes for thermolabile hemolysin (
tlh). When coupled with the Kogure method to distinguish viable from dead cells, RING-FISH probes reliably enumerated total, viable
V. parahaemolyticus. The probe was tested for sensitivity and specificity against a pure culture of
tlh
+
,
tdh
−
,
trh
−
V. parahaemolyticus, pure cultures of
Vibrio vulnificus,
Vibrio harveyi,
Vibrio alginolyticus and
Vibrio fischeri, and a mixed environmental sample. This research will provide additional tools for a better understanding of the risk these environmental organisms pose to human health. Vibrio parahaemolyticus is a gram-negative, halophilic bacterium indigenous to marine and estuarine environments and it is capable of causing food and water-borne illness in humans. It can also cause disease in marine animals, including cultured species. Currently, culture-based techniques are used for quantification of V. parahaemolyticus in environmental samples; however, these can be misleading as they fail to detect V. parahaemolyticus in a viable but nonculturable (VBNC) state which leads to an underestimation of the population density. In this study, we used a novel fluorescence visualization technique, called recognition of individual gene fluorescence in situ hybridization (RING-FISH), which targets chromosomal DNA for enumeration. A polynucleotide probe labeled with Cyanine 3 (Cy3) was created corresponding to the ubiquitous V. parahaemolyticus gene that codes for thermolabile hemolysin (tlh). When coupled with the Kogure method to distinguish viable from dead cells, RING-FISH probes reliably enumerated total, viable V. parahaemolyticus. The probe was tested for sensitivity and specificity against a pure culture of tlh(+), tdh(-), trh(-)V. parahaemolyticus, pure cultures of Vibrio vulnificus, Vibrio harveyi, Vibrio alginolyticus and Vibrio fischeri, and a mixed environmental sample. This research will provide additional tools for a better understanding of the risk these environmental organisms pose to human health. Vibrio parahaemolyticus is a gram-negative, halophilic bacterium indigenous to marine and estuarine environments and it is capable of causing food and water-borne illness in humans. It can also cause disease in marine animals, including cultured species. Currently, culture-based techniques are used for quantification of V. parahaemolyticus in environmental samples; however, these can be misleading as they fail to detect V. parahaemolyticus in a viable but nonculturable (VBNC) state which leads to an underestimation of the population density. In this study, we used a novel fluorescence visualization technique, called recognition of individual gene fluorescence in situ hybridization (RING-FISH), which targets chromosomal DNA for enumeration. A polynucleotide probe labeled with Cyanine 3 (Cy3) was created corresponding to the ubiquitous V. parahaemolyticus gene that codes for thermolabile hemolysin (tlh). When coupled with the Kogure method to distinguish viable from dead cells, RING-FISH probes reliably enumerated total, viable V. parahaemolyticus. The probe was tested for sensitivity and specificity against a pure culture of tlh + , tdh a , trh a V. parahaemolyticus, pure cultures of Vibrio vulnificus, Vibrio harveyi, Vibrio alginolyticus and Vibrio fischeri, and a mixed environmental sample. This research will provide additional tools for a better understanding of the risk these environmental organisms pose to human health. Vibrio parahaemolyticus is a gram-negative, halophilic bacterium indigenous to marine and estuarine environments and it is capable of causing food and water-borne illness in humans. It can also cause disease in marine animals, including cultured species. Currently, culture-based techniques are used for quantification of V. parahaemolyticus in environmental samples; however, these can be misleading as they fail to detect V. parahaemolyticus in a viable but nonculturable (VBNC) state which leads to an underestimation of the population density. In this study, we used a novel fluorescence visualization technique, called recognition of individual gene fluorescence in situ hybridization (RING-FISH), which targets chromosomal DNA for enumeration. A polynucleotide probe labeled with Cyanine 3 (Cy3) was created corresponding to the ubiquitous V. parahaemolyticus gene that codes for thermolabile hemolysin (tlh). When coupled with the Kogure method to distinguish viable from dead cells, RING-FISH probes reliably enumerated total, viable V. parahaemolyticus. The probe was tested for sensitivity and specificity against a pure culture of tlh⁺, tdh⁻, trh⁻V. parahaemolyticus, pure cultures of Vibrio vulnificus, Vibrio harveyi, Vibrio alginolyticus and Vibrio fischeri, and a mixed environmental sample. This research will provide additional tools for a better understanding of the risk these environmental organisms pose to human health. |
Author | Noriea, Nicholas F. Grimes, D. Jay Johnson, Crystal N. Griffitt, Kimberly J. |
Author_xml | – sequence: 1 givenname: Kimberly J. surname: Griffitt fullname: Griffitt, Kimberly J. email: kimberly.griffitt@usm.edu organization: The University of Southern Mississippi, Gulf Coast Research Laboratory, Ocean Springs, MS 39564, USA – sequence: 2 givenname: Nicholas F. surname: Noriea fullname: Noriea, Nicholas F. email: nicholas.noriea@eagles.usm.edu organization: The University of Southern Mississippi, Gulf Coast Research Laboratory, Ocean Springs, MS 39564, USA – sequence: 3 givenname: Crystal N. surname: Johnson fullname: Johnson, Crystal N. email: cnjohnson@lsu.edu organization: Louisiana State University, Departmental of Environmental Sciences, Baton Rouge, LA 70803, USA – sequence: 4 givenname: D. Jay surname: Grimes fullname: Grimes, D. Jay email: jay.grimes@usm.edu organization: The University of Southern Mississippi, Gulf Coast Research Laboratory, Ocean Springs, MS 39564, USA |
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Keywords | Viable but nonculturable Vibrio parahaemolyticus Recognition of individual gene fluorescence in situ hybridization VBNC RING-FISH Molecular hybridization In situ Method Recognition of individual gene fluorescence Enumeration(counting) Gene Fluorescence in situ hybridization Bacteria Vibrionaceae VBNC form in situ hybridization |
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SubjectTerms | bacteria Bacterial Proteins - genetics Bacteriological methods and techniques used in bacteriology Bacteriology Biological and medical sciences Brackish Colony Count, Microbial DNA fluorescence fluorescence in situ hybridization Fundamental and applied biological sciences. Psychology genes hemolysins human health humans In Situ Hybridization, Fluorescence - methods Microbial Viability Microbiology plate count population density Recognition of individual gene fluorescence in situ hybridization RING-FISH risk VBNC Viable but nonculturable Vibrio alginolyticus Vibrio fischeri Vibrio harveyi Vibrio parahaemolyticus Vibrio parahaemolyticus - genetics Vibrio parahaemolyticus - growth & development Vibrio parahaemolyticus - isolation & purification Vibrio vulnificus waterborne diseases |
Title | Enumeration of Vibrio parahaemolyticus in the viable but nonculturable state using direct plate counts and recognition of individual gene fluorescence in situ hybridization |
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