Antibiotic resistance genes in bacteria: Occurrence, spread, and control

The production and use of antibiotics are becoming increasingly common worldwide, and the problem of antibiotic resistance is increasing alarmingly. Drug‐resistant infections threaten human life and health and impose a heavy burden on the global economy. The origin and molecular basis of bacterial r...

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Published inJournal of basic microbiology Vol. 61; no. 12; pp. 1049 - 1070
Main Authors Jian, Zonghui, Zeng, Li, Xu, Taojie, Sun, Shuai, Yan, Shixiong, Yang, Lan, Huang, Ying, Jia, Junjing, Dou, Tengfei
Format Journal Article
LanguageEnglish
Published Germany 01.12.2021
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Abstract The production and use of antibiotics are becoming increasingly common worldwide, and the problem of antibiotic resistance is increasing alarmingly. Drug‐resistant infections threaten human life and health and impose a heavy burden on the global economy. The origin and molecular basis of bacterial resistance is the presence of antibiotic resistance genes (ARGs). Investigations on ARGs mostly focus on the environments in which antibiotics are frequently used, such as hospitals and farms. This literature review summarizes the current knowledge of the occurrence of antibiotic‐resistant bacteria in nonclinical environments, such as air, aircraft wastewater, migratory bird feces, and sea areas in‐depth, which have rarely been involved in previous studies. Furthermore, the mechanism of action of plasmid and phage during horizontal gene transfer was analyzed, and the transmission mechanism of ARGs was summarized. This review highlights the new mechanisms that enhance antibiotic resistance and the evolutionary background of multidrug resistance; in addition, some promising points for controlling or reducing the occurrence and spread of antimicrobial resistance are also proposed.
AbstractList The production and use of antibiotics are becoming increasingly common worldwide, and the problem of antibiotic resistance is increasing alarmingly. Drug‐resistant infections threaten human life and health and impose a heavy burden on the global economy. The origin and molecular basis of bacterial resistance is the presence of antibiotic resistance genes (ARGs). Investigations on ARGs mostly focus on the environments in which antibiotics are frequently used, such as hospitals and farms. This literature review summarizes the current knowledge of the occurrence of antibiotic‐resistant bacteria in nonclinical environments, such as air, aircraft wastewater, migratory bird feces, and sea areas in‐depth, which have rarely been involved in previous studies. Furthermore, the mechanism of action of plasmid and phage during horizontal gene transfer was analyzed, and the transmission mechanism of ARGs was summarized. This review highlights the new mechanisms that enhance antibiotic resistance and the evolutionary background of multidrug resistance; in addition, some promising points for controlling or reducing the occurrence and spread of antimicrobial resistance are also proposed.
The production and use of antibiotics are becoming increasingly common worldwide, and the problem of antibiotic resistance is increasing alarmingly. Drug-resistant infections threaten human life and health and impose a heavy burden on the global economy. The origin and molecular basis of bacterial resistance is the presence of antibiotic resistance genes (ARGs). Investigations on ARGs mostly focus on the environments in which antibiotics are frequently used, such as hospitals and farms. This literature review summarizes the current knowledge of the occurrence of antibiotic-resistant bacteria in nonclinical environments, such as air, aircraft wastewater, migratory bird feces, and sea areas in-depth, which have rarely been involved in previous studies. Furthermore, the mechanism of action of plasmid and phage during horizontal gene transfer was analyzed, and the transmission mechanism of ARGs was summarized. This review highlights the new mechanisms that enhance antibiotic resistance and the evolutionary background of multidrug resistance; in addition, some promising points for controlling or reducing the occurrence and spread of antimicrobial resistance are also proposed.The production and use of antibiotics are becoming increasingly common worldwide, and the problem of antibiotic resistance is increasing alarmingly. Drug-resistant infections threaten human life and health and impose a heavy burden on the global economy. The origin and molecular basis of bacterial resistance is the presence of antibiotic resistance genes (ARGs). Investigations on ARGs mostly focus on the environments in which antibiotics are frequently used, such as hospitals and farms. This literature review summarizes the current knowledge of the occurrence of antibiotic-resistant bacteria in nonclinical environments, such as air, aircraft wastewater, migratory bird feces, and sea areas in-depth, which have rarely been involved in previous studies. Furthermore, the mechanism of action of plasmid and phage during horizontal gene transfer was analyzed, and the transmission mechanism of ARGs was summarized. This review highlights the new mechanisms that enhance antibiotic resistance and the evolutionary background of multidrug resistance; in addition, some promising points for controlling or reducing the occurrence and spread of antimicrobial resistance are also proposed.
Author Zeng, Li
Jia, Junjing
Dou, Tengfei
Xu, Taojie
Jian, Zonghui
Yan, Shixiong
Yang, Lan
Huang, Ying
Sun, Shuai
Author_xml – sequence: 1
  givenname: Zonghui
  orcidid: 0000-0001-9156-4757
  surname: Jian
  fullname: Jian, Zonghui
  organization: Yunnan Agricultural University
– sequence: 2
  givenname: Li
  surname: Zeng
  fullname: Zeng, Li
  organization: Kunming Medical University Affiliated Stomatological Hospital
– sequence: 3
  givenname: Taojie
  surname: Xu
  fullname: Xu, Taojie
  organization: Yunnan Agricultural University
– sequence: 4
  givenname: Shuai
  surname: Sun
  fullname: Sun, Shuai
  organization: Yunnan Agricultural University
– sequence: 5
  givenname: Shixiong
  surname: Yan
  fullname: Yan, Shixiong
  organization: Yunnan Agricultural University
– sequence: 6
  givenname: Lan
  surname: Yang
  fullname: Yang, Lan
  organization: Yunnan Agricultural University
– sequence: 7
  givenname: Ying
  surname: Huang
  fullname: Huang, Ying
  organization: Yunnan Agricultural University
– sequence: 8
  givenname: Junjing
  surname: Jia
  fullname: Jia, Junjing
  email: junjingli2009@hotmail.com
  organization: Yunnan Agricultural University
– sequence: 9
  givenname: Tengfei
  surname: Dou
  fullname: Dou, Tengfei
  email: tengfeidou@sina.com
  organization: Yunnan Agricultural University
BackLink https://www.ncbi.nlm.nih.gov/pubmed/34651331$$D View this record in MEDLINE/PubMed
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Cites_doi 10.3389/fmicb.2012.00399
10.1371/journal.pone.0227973
10.1126/science.1155157
10.1016/j.scitotenv.2019.134446
10.1111/j.1574-6941.2005.00032.x
10.1128/mBio.01918-14
10.1016/j.envpol.2021.117402
10.1016/j.chemosphere.2010.10.026
10.3389/fmicb.2013.00194
10.1016/j.ibiod.2019.01.009
10.1186/s13059-020-01964-x
10.1038/nature10388
10.1038/nmicrobiol.2016.260
10.1128/AAC.00084-08
10.1093/cid/ciy955
10.1016/j.biortech.2019.02.030
10.3389/fmicb.2013.00053
10.3389/fmicb.2013.00138
10.1016/j.envpol.2016.01.007
10.1128/AAC.49.10.4390-4392.2005
10.1016/j.ecoenv.2020.110567
10.1016/j.jmb.2019.06.033
10.1098/rspb.2011.1933
10.1016/j.biortech.2012.03.045
10.1016/S1473-3099(18)30605-4
10.1126/science.1171908
10.1128/AAC.00535-11
10.1073/pnas.1606590113
10.1038/s41545-020-0051-0
10.1086/501779
10.1186/s12879-016-2050-9
10.1021/acs.est.9b03236
10.1016/j.ijantimicag.2009.12.011
10.1128/AAC.01152-09
10.1016/j.jtbi.2020.110524
10.1073/pnas.1503141112
10.1038/ncomms5498
10.1111/j.1574-6968.2004.tb09766.x
10.1016/j.tim.2017.02.012
10.1128/AAC.00809-12
10.1016/j.ijantimicag.2012.08.010
10.1126/science.aat5867
10.1016/j.tim.2017.05.011
10.1007/978-3-662-09259-0_12
10.1126/science.1192243
10.2166/wh.2009.159
10.1038/nrmicro2802
10.1111/j.1365-2958.2008.06424.x
10.1038/ncomms13333
10.1039/c0cc05111j
10.1021/acs.estlett.7b00561
10.1021/es504157v
10.1016/j.cej.2019.04.207
10.1128/CMR.00088-17
10.3389/fmicb.2012.00408
10.1111/j.1574-6968.2006.00629.x
10.1016/j.tim.2011.09.005
10.1016/j.envres.2018.11.040
10.1016/j.jhazmat.2017.11.020
10.1016/j.chemosphere.2006.03.026
10.1126/scitranslmed.aau9748
10.1073/pnas.71.3.971
10.1038/srep30237
10.3390/microorganisms8091293
10.1371/journal.pone.0034953
10.1371/journal.ppat.1000944
10.1007/978-3-030-51849-3_2
10.1038/nrmicro1614
10.1016/j.envint.2019.104936
10.1016/j.chemosphere.2013.08.068
10.1021/es200827t
10.1038/ng.3147
10.1021/acs.est.5b03522
10.1146/annurev.biochem.78.082907.145923
10.1093/gbe/evy005
10.1016/j.watres.2019.06.026
10.1016/0003-9861(77)90508-2
10.1093/genetics/162.4.1525
10.1016/j.cell.2019.09.015
10.1099/00221287-147-12-3403
10.1007/s11845-018-1774-5
10.1289/EHP35
10.1016/S1473-3099(14)70780-7
10.1016/j.tim.2019.05.003
10.2175/193864709793955735
10.1186/s40168-020-00863-4
10.7554/eLife.18082
10.1128/AAC.00131-06
10.1016/j.biortech.2020.124181
10.1371/journal.pone.0017549
10.1128/mBio.01975-15
10.1038/s41467-020-16669-9
10.1016/j.chemosphere.2018.09.066
10.2741/1075
10.1016/j.scitotenv.2018.01.148
10.1016/j.cell.2019.11.021
10.1007/s00705-021-05024-y
10.1016/j.biortech.2018.09.013
10.1093/jac/dkx488
10.1016/j.scitotenv.2018.10.446
10.1007/s00438-019-01531-5
10.1016/j.ijantimicag.2012.10.010
10.1590/S1517-83822014005000042
10.1128/AAC.01684-13
10.1038/s41467-019-08526-1
10.1073/pnas.1222743110
10.1016/j.plasmid.2015.01.001
10.1186/1471-2164-11-46
10.1016/j.envint.2013.08.023
10.1038/s41598-019-49898-0
10.1128/AEM.01682-13
10.1186/1471-2164-12-512
10.1016/j.resmic.2010.07.004
10.1080/1040841X.2017.1303661
10.1128/CMR.00043-12
10.1038/s41467-018-07992-3
10.1016/j.copbio.2008.05.006
10.1128/AAC.02005-12
10.1186/s40168-016-0199-5
10.1093/dnares/dsm018
10.1111/jam.12653
10.1016/S0168-6496(99)00079-3
10.1016/j.scitotenv.2014.02.027
10.1128/CMR.00066-18
10.1042/EBC20160063
10.1128/CMR.00037-09
10.1016/S1473-3099(10)70143-2
10.1016/j.jhazmat.2020.123961
10.1021/acschembio.7b00687
10.1146/annurev-virology-101416-041624
10.3389/fmicb.2015.00034
10.3389/fmicb.2015.00242
10.1016/S1473-3099(18)30792-8
10.1016/j.envint.2020.105649
10.1371/journal.pone.0119403
10.1021/acs.est.8b02204
10.1016/j.jhazmat.2015.10.037
10.1038/nbt.4203
10.1111/j.1469-0691.2007.01857.x
10.1038/s41564-019-0496-4
10.1038/nature14098
10.1371/journal.pone.0107176
10.1093/clinids/10.4.677
10.1021/acs.est.5b00729
10.1016/j.addr.2005.04.002
10.1371/journal.pgen.1003393
10.1016/j.scitotenv.2019.06.081
10.1038/s41598-018-23962-7
10.1016/j.biortech.2015.12.030
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Issue 12
Keywords multidrug resistance
antibiotic resistance genes
drug-resistant bacteria
antimicrobial resistance
horizontal gene transfer
Language English
License Attribution-NonCommercial
2021 The Authors. Journal of Basic Microbiology published by Wiley-VCH GmbH.
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MergedId FETCHMERGED-LOGICAL-c4441-8d6616f69924aca9f2856b730846a433e5ce64271b8beec4080e9f6ce28ba4a93
Notes Zonghui Jian, Li Zeng, and Taojie Xu contributed equally to this study.
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References 2015; 79
2010; 11
2011; 477
2010; 10
2013; 4
2019; 11
2019; 10
2013; 61
2018; 169
2019; 688
2019; 19
2011; 55
2020; 15
2021; 285
2016; 304
2021; 166
2020; 11
2008; 31
2012; 126
2019; 161
2012; 10
2001; 147
2013; 9
2021; 319
2010; 23
2018; 8
2009; 2009
2019; 280
2018; 5
2013; 57
2018; 213
2019; 27
2014; 14
2007; 5
2014; 481
2013; 110
2012; 25
2018; 31
2010; 6
2019; 431
2019; 274
2018; 36
2010; 8
2017; 61
2019; 9
2018; 187
2019; 4
2006; 50
2010; 35
1974; 71
2006; 55
2019; 32
2011; 82
2018; 344
1988; 10
2013; 93
2020; 700
2010; 161
2018; 626
2008; 52
2016; 203
2011; 6
2016; 16
2014; 45
2007; 14
2009; 78
2016; 4
2016; 5
2016; 6
2016; 7
2013; 79
2015; 112
2010; 330
2016; 211
2019; 179
2015; 517
2020; 21
2019; 294
2018; 10
2018; 362
2007; 269
2010; 54
2017; 2
2017; 4
2019; 53
2021; 403
2017; 43
2011; 12
2008; 70
2011; 19
2012; 56
2020; 8
1977; 181
2015; 47
2014; 5
2015; 49
2020; 3
2006; 65
2015; 40
2019; 65
2003; 8
2019; 69
2016; 113
2020; 138
2014; 58
2018; 73
2014; 9
2017; 125
2009; 324
2014; 117
2015; 6
2017; 25
2000; 21
2008; 19
2013; 41
2015; 10
2008; 14
2016; 50
2004
2002
2020; 509
2008; 320
2005; 49
2012; 3
2020; 197
2002; 162
2017; 12
2019; 654
2019; 138
2019
2020; 69
2017
2016
2018; 52
2011; 45
2011; 47
2012; 279
2012; 7
2019; 372
2004; 238
2005; 57
2019; 131
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Lerminiaux NA (e_1_2_9_48_1) 2019; 65
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Yuan QB (e_1_2_9_148_1) 2015; 10
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References_xml – volume: 8
  start-page: 75
  year: 2020
  article-title: Freshwater viral metagenome reveals novel and functional phage‐borne antibiotic resistance genes
  publication-title: Microbiome
– volume: 61
  start-page: 1
  year: 2013
  end-page: 7
  article-title: Abundance and persistence of antibiotic resistance genes in livestock farms: a comprehensive investigation in eastern China
  publication-title: Environ Int
– volume: 362
  start-page: 207
  year: 2018
  end-page: 12
  article-title: Genome hypermobility by lateral transduction
  publication-title: Science
– volume: 25
  start-page: 893
  year: 2017
  end-page: 905
  article-title: Transfer of antibiotic resistance in
  publication-title: Trends Microbiol
– volume: 285
  year: 2021
  article-title: Distribution of antibiotic resistance genes in the environment
  publication-title: Environ Pollut
– volume: 49
  start-page: 1095
  year: 2015
  end-page: 104
  article-title: Prevalence of antibiotic resistance genes and bacterial pathogens in long‐term manured greenhouse soils as revealed by metagenomic survey
  publication-title: Environ Sci Technol
– volume: 31
  start-page: 39
  issue: 1
  year: 2008
  end-page: 45
  article-title: Influence of fungal–bacterial interactions on bacterial conjugation in the residue‐sphere
  publication-title: FEMS Microbiol Ecol
– volume: 112
  start-page: 5649
  year: 2015
  end-page: 54
  article-title: Global trends in antimicrobial use in food animals
  publication-title: Proc Natl Acad Sci U S A
– volume: 79
  start-page: 5701
  year: 2013
  end-page: 9
  article-title: Impact of manure fertilization on the abundance of antibiotic‐resistant bacteria and frequency of detection of antibiotic resistance genes in soil and on vegetables at harvest
  publication-title: Appl Environ Microbiol
– volume: 517
  start-page: 455
  year: 2015
  end-page: 9
  article-title: A new antibiotic kills pathogens without detectable resistance
  publication-title: Nature
– volume: 5
  year: 2014
  article-title: Selection of a multidrug resistance plasmid by sublethal levels of antibiotics and heavy metals
  publication-title: mBio
– volume: 113
  start-page: E4523
  year: 2016
  end-page: 30
  article-title: ‐methylation of a bactericidal compound as a resistance mechanism in
  publication-title: Proc Natl Acad Sci U S A
– volume: 52
  start-page: 10975
  year: 2018
  end-page: 84
  article-title: Global survey of antibiotic resistance genes in air
  publication-title: Environ Sci Technol
– volume: 12
  start-page: 2552
  issue: 10
  year: 2017
  end-page: 57
  article-title: Whole‐genome shotgun sequencing of two beta‐proteobacterial species in search of the bulgecin biosynthetic cluster
  publication-title: ACS Chem Biol
– volume: 21
  start-page: 55
  year: 2020
  article-title: Longitudinal survey of microbiome associated with particulate matter in a megacity
  publication-title: Genome Biol
– volume: 211
  start-page: 332
  year: 2016
  end-page: 7
  article-title: Effects of manure and mineral fertilization strategies on soil antibiotic resistance gene levels and microbial community in a paddy‐upland rotation system
  publication-title: Environ Pollut
– volume: 32
  year: 2019
  article-title: Phage therapy in the postantibiotic era
  publication-title: Clin Microbiol Rev
– volume: 8
  start-page: 247
  year: 2010
  end-page: 56
  article-title: Genes encoding tetracycline resistance in a full‐scale municipal wastewater treatment plant investigated during one year
  publication-title: J Water Health
– volume: 700
  year: 2020
  article-title: Exploring the profile of antimicrobial resistance genes harboring by bacteriophage in chicken feces
  publication-title: Sci Total Environ
– volume: 5
  start-page: 175
  year: 2007
  end-page: 86
  article-title: The antibiotic resistome: the nexus of chemical and genetic diversity
  publication-title: Nat Rev Microbiol
– volume: 3
  start-page: 1
  issue: 1
  year: 2020
  end-page: 11
  article-title: Antibiotic resistance genes from livestock waste: occurrence, dissemination, and treatment
  publication-title: NPJ Clean Water
– volume: 10
  start-page: 472
  year: 2012
  end-page: 82
  article-title: Gene transfer agents: phage‐like elements of genetic exchange
  publication-title: Nat Rev Microbiol
– volume: 197
  year: 2020
  article-title: Family livestock waste: an ignored pollutant resource of antibiotic resistance genes
  publication-title: Ecotoxicol Environ Saf
– volume: 269
  start-page: 240
  year: 2007
  end-page: 7
  article-title: Organization of butyrate synthetic genes in human colonic bacteria: phylogenetic conservation and horizontal gene transfer
  publication-title: FEMS Microbiol Lett
– start-page: 1
  year: 2016
  end-page: 16
– volume: 294
  start-page: 597
  year: 2019
  end-page: 605
  article-title: Distinct evolutionary origins of common multidrug resistance phenotypes in DT104: a convergent process for adaptation under stress
  publication-title: Mol Genet Genomics
– volume: 10
  start-page: 359
  year: 2018
  end-page: 69
  article-title: Packaging of DNA into gene transfer agent particles is not random
  publication-title: Genome Biol Evol
– volume: 36
  start-page: 971
  year: 2018
  end-page: 6
  article-title: Conversion of staphylococcal pathogenicity islands to CRISPR‐carrying antibacterial agents that cure infections in mice
  publication-title: Nat Biotechnol
– volume: 431
  start-page: 3370
  year: 2019
  end-page: 99
  article-title: Crossroads of antibiotic resistance and biosynthesis
  publication-title: J Mol Biol
– volume: 166
  start-page: 1337
  year: 2021
  end-page: 44
  article-title: Diversity of β‐lactamase‐encoding genes in wastewater: bacteriophages as reporters
  publication-title: Arch Virol
– volume: 117
  start-page: 1689
  year: 2014
  end-page: 99
  article-title: Dynamics of antibiotic resistance genes and presence of putative pathogens during ambient temperature anaerobic digestion
  publication-title: J Appl Microbiol
– volume: 7
  year: 2012
  article-title: Antibiotic resistance is prevalent in an isolated cave microbiome
  publication-title: PLoS One
– year: 2019
– start-page: 149
  year: 2004
  end-page: 54
– volume: 7
  year: 2016
  article-title: ABC‐F proteins mediate antibiotic resistance through ribosomal protection
  publication-title: mBio
– volume: 131
  year: 2019
  article-title: Comparison of culturable antibiotic‐resistant bacteria in polluted and non‐polluted air in Beijing, China
  publication-title: Environ Int
– volume: 7
  year: 2016
  article-title: Bacterial viruses enable their host to acquire antibiotic resistance genes from neighbouring cells
  publication-title: Nat Commun
– volume: 10
  start-page: 677
  year: 1988
  end-page: 8
  article-title: An enzyme from bacteria able to destroy penicillin. 1940
  publication-title: Rev Infect Dis
– volume: 203
  start-page: 11
  year: 2016
  end-page: 7
  article-title: Effect of different biochars on antibiotic resistance genes and bacterial community during chicken manure composting
  publication-title: Bioresour Technol
– volume: 179
  start-page: 1499
  year: 2019
  end-page: 511
  article-title: Spatiotemporal analysis of DNA integration during natural transformation reveals a mode of nongenetic inheritance in bacteria
  publication-title: Cell
– volume: 45
  start-page: 539
  year: 2014
  end-page: 44
  article-title: Multi drug resistance in strong biofilm forming clinical isolates of
  publication-title: Braz J Microbiol
– volume: 65
  start-page: 725
  year: 2006
  end-page: 9
  article-title: A global perspective on the use, sales, exposure pathways, occurrence, fate and effects of veterinary antibiotics (VAs) in the environment
  publication-title: Chemosphere
– volume: 372
  start-page: 815
  year: 2019
  end-page: 24
  article-title: Jointly reducing antibiotic resistance genes and improving methane yield in anaerobic digestion of chicken manure by feedstock microwave pretreatment and activated carbon supplementation
  publication-title: Chem Eng J
– volume: 4
  start-page: 87
  year: 2017
  end-page: 104
  article-title: The distribution, evolution, and roles of gene transfer agents in prokaryotic genetic exchange
  publication-title: Annu Rev Virol
– volume: 9
  year: 2013
  article-title: A gene transfer agent and a dynamic repertoire of secretion systems hold the keys to the explosive radiation of the emerging pathogen
  publication-title: PLoS Genet
– volume: 110
  start-page: 3435
  year: 2013
  end-page: 40
  article-title: Diverse and abundant antibiotic resistance genes in Chinese swine farms
  publication-title: Proc Natl Acad Sci U S A
– volume: 61
  start-page: 49
  year: 2017
  end-page: 59
  article-title: Intrinsic, adaptive and acquired antimicrobial resistance in Gram‐negative bacteria
  publication-title: Essays Biochem
– volume: 55
  start-page: 4908
  year: 2011
  end-page: 11
  article-title: Bacteriophages carrying antibiotic resistance genes in fecal waste from cattle, pigs, and poultry
  publication-title: Antimicrob Agents Chemother
– volume: 82
  start-page: 179
  year: 2011
  end-page: 86
  article-title: Occurrence and distribution of pharmaceuticals in wastewater from households, livestock farms, hospitals and pharmaceutical manufactures
  publication-title: Chemosphere
– volume: 330
  start-page: 50
  year: 2010
  article-title: High frequency of horizontal gene transfer in the oceans
  publication-title: Science
– volume: 19
  start-page: 588
  year: 2011
  end-page: 95
  article-title: The emerging NDM carbapenemases
  publication-title: Trends Microbiol
– volume: 27
  start-page: 850
  year: 2019
  end-page: 3
  article-title: Antimicrobial tolerance and metabolic adaptations in microbial biofilms
  publication-title: Trends Microbiol
– volume: 47
  start-page: 4055
  year: 2011
  end-page: 61
  article-title: Molecular mechanisms of antibiotic resistance
  publication-title: Chem Commun
– volume: 19
  start-page: 56
  year: 2019
  end-page: 66
  article-title: Attributable deaths and disability‐adjusted life‐years caused by infections with antibiotic‐resistant bacteria in the EU and the European Economic Area in 2015: a population‐level modelling analysis
  publication-title: Lancet Infect Dis
– volume: 25
  start-page: 614
  year: 2017
  end-page: 23
  article-title: Bacteria‐bacteriophage coevolution in the human gut: implications for microbial diversity and functionality
  publication-title: Trends Microbiol
– volume: 93
  start-page: 2864
  year: 2013
  end-page: 8
  article-title: Ultraviolet reduction of erythromycin and tetracycline resistant heterotrophic bacteria and their resistance genes in municipal wastewater
  publication-title: Chemosphere
– volume: 9
  year: 2014
  article-title: Understanding the molecular epidemiology and global relationships of from swine herds in the United States: a multi‐locus sequence typing approach
  publication-title: PLoS One
– volume: 78
  start-page: 119
  year: 2009
  end-page: 46
  article-title: Multidrug resistance in bacteria
  publication-title: Annu Rev Biochem
– volume: 50
  start-page: 2500
  year: 2006
  end-page: 5
  article-title: The Cfr rRNA methyltransferase confers resistance to phenicols, lincosamides, oxazolidinones, pleuromutilins, and streptogramin A antibiotics
  publication-title: Antimicrob Agents Chemother
– volume: 4
  start-page: 194
  year: 2013
  article-title: Anaerobic expression of the gadE‐mdtEF multidrug efflux operon is primarily regulated by the two‐component system ArcBA through antagonizing the H‐NS mediated repression
  publication-title: Front Microbiol
– year: 2002
– volume: 10
  start-page: 80
  year: 2019
  article-title: Fecal pollution can explain antibiotic resistance gene abundances in anthropogenically impacted environments
  publication-title: Nat Commun
– volume: 162
  start-page: 1525
  year: 2002
  end-page: 32
  article-title: Plasmids spread very fast in heterogeneous bacterial communities
  publication-title: Genetics
– volume: 169
  start-page: 483
  year: 2018
  end-page: 93
  article-title: Human health risk assessment of antibiotic resistance associated with antibiotic residues in the environment: A review
  publication-title: Environ Res
– volume: 125
  start-page: 560
  issue: 4
  year: 2017
  end-page: 9
  article-title: The prevalence of antibiotic‐resistant nasal carriage among industrial hog operation workers, community residents, and children living in their households: North Carolina, USA
  publication-title: Environ Health Persp
– volume: 213
  start-page: 463
  year: 2018
  end-page: 71
  article-title: Characterization of airborne antibiotic resistance genes from typical bioaerosol emission sources in the urban environment using metagenomic approach
  publication-title: Chemosphere
– volume: 403
  year: 2021
  article-title: Interactions of microplastics and antibiotic resistance genes and their effects on the aquaculture environments
  publication-title: J Hazard Mater
– volume: 58
  start-page: 606
  year: 2014
  end-page: 9
  article-title: Antibiotic resistance genes in the bacteriophage DNA fraction of human fecal samples
  publication-title: Antimicrob Agents Chemother
– volume: 509
  year: 2020
  article-title: Competition delays multidrug resistance evolution during combination therapy
  publication-title: J Theor Biol
– volume: 238
  start-page: 267
  year: 2004
  end-page: 72
  article-title: Role of an acrR mutation in multidrug resistance of in vitro‐selected fluoroquinolone‐resistant mutants of serovar Typhimurium
  publication-title: FEMS Microbiol Lett
– volume: 688
  start-page: 262
  year: 2019
  end-page: 9
  article-title: Exploring the persistence and spreading of antibiotic resistance from manure to biocompost, soils and vegetables
  publication-title: Sci Total Environ
– volume: 49
  start-page: 6772
  year: 2015
  end-page: 82
  article-title: Comprehensive evaluation of antibiotics emission and fate in the river basins of China: source analysis, multimedia modeling, and linkage to bacterial resistance
  publication-title: Environ Sci Technol
– volume: 15
  year: 2020
  article-title: Surveys of knowledge and awareness of antibiotic use and antimicrobial resistance in general population: a systematic review
  publication-title: PLoS One
– volume: 16
  start-page: 716
  year: 2016
  article-title: Prevalence of colonization by methicillin‐resistant ST398 in pigs and pig farm workers in an area of Catalonia, Spain
  publication-title: BMC Infect Dis
– volume: 481
  start-page: 69
  year: 2014
  end-page: 74
  article-title: Fate of antimicrobials and antimicrobial resistance genes in simulated swine manure storage
  publication-title: Sci Total Environ
– volume: 179
  start-page: 459
  year: 2019
  end-page: 69
  article-title: Engineering phage host‐range and suppressing bacterial resistance through phage tail fiber mutagenesis
  publication-title: Cell
– volume: 654
  start-page: 906
  year: 2019
  end-page: 13
  article-title: Field‐based evidence for enrichment of antibiotic resistance genes and mobile genetic elements in manure‐amended vegetable soils
  publication-title: Sci Total Environ
– volume: 52
  start-page: 2428
  year: 2008
  end-page: 34
  article-title: rAMR mutations involved in efflux‐mediated multidrug resistance in serovar Typhimurium
  publication-title: Antimicrob Agents Chemother
– volume: 2009
  start-page: 577
  issue: 17
  year: 2009
  end-page: 89
  article-title: Disinfection of microconstituent antibiotic resistance genes by UV light and sludge digestion
  publication-title: Proc Water Environ Fed
– volume: 69
  start-page: 563
  year: 2019
  end-page: 70
  article-title: The mortality burden of multidrug‐resistant pathogens in India: a retrospective, observational study
  publication-title: Clin Infect Dis
– volume: 57
  start-page: 637
  year: 2013
  end-page: 9
  article-title: The target of daptomycin is absent from and other Gram‐negative pathogens
  publication-title: Antimicrob Agents Chemother
– volume: 14
  start-page: 169
  year: 2007
  end-page: 81
  article-title: Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes
  publication-title: DNA Res
– volume: 65
  start-page: 34
  year: 2019
  end-page: 44
  article-title: Horizontal transfer of antibiotic resistance genes in clinical environments
  publication-title: J Microbiol
– volume: 626
  start-page: 835
  year: 2018
  end-page: 41
  article-title: Prevalence of antibiotic resistance genes in bacteriophage DNA fraction from Funan River water in Sichuan, China
  publication-title: Sci Total Environ
– volume: 14
  start-page: 3
  issue: Suppl 1
  year: 2008
  end-page: 10
  article-title: Defining an extended‐spectrum beta‐lactamase
  publication-title: Clin Microbiol Infect
– volume: 49
  start-page: 4390
  year: 2005
  end-page: 2
  article-title: Contribution of mutation at amino acid 45 of AcrR to acrB expression and ciprofloxacin resistance in clinical and veterinary Isolates
  publication-title: Antimicrob Agents Chemother
– volume: 3
  start-page: 399
  year: 2012
  article-title: Heavy metal driven co‐selection of antibiotic resistance in soil and water bodies impacted by agriculture and aquaculture
  publication-title: Front Microbiol
– volume: 71
  start-page: 971
  year: 1974
  end-page: 3
  article-title: Genetic recombination in
  publication-title: Proc Natl Acad Sci U S A
– volume: 279
  start-page: 1477
  year: 2012
  end-page: 84
  article-title: Bacterial recombination promotes the evolution of multi‐drug‐resistance in functionally diverse populations
  publication-title: Proc Biol Sci
– volume: 181
  start-page: 300
  year: 1977
  end-page: 7
  article-title: The gene transfer agent of . Purification and characterization of its nucleic acid
  publication-title: Arch Biochem Biophys
– volume: 477
  start-page: 457
  year: 2011
  end-page: 61
  article-title: Antibiotic resistance is ancient
  publication-title: Nature
– volume: 41
  start-page: 75
  year: 2013
  end-page: 9
  article-title: Underlying mechanisms of carbapenem resistance in extended‐spectrum β‐lactamase‐producing and isolates at a tertiary care centre in Lebanon: role of OXA‐48 and NDM‐1 carbapenemases
  publication-title: Int J Antimicrob Agents
– volume: 304
  start-page: 18
  year: 2016
  end-page: 25
  article-title: Behavior of antibiotics and antibiotic resistance genes in eco‐agricultural system: a case study
  publication-title: J Hazard Mater
– volume: 57
  start-page: 1451
  year: 2005
  end-page: 70
  article-title: Bacterial resistance to antibiotics: enzymatic degradation and modification
  publication-title: Adv Drug Deliv Rev
– volume: 73
  start-page: 1121
  year: 2018
  end-page: 37
  article-title: Plasmids carrying antimicrobial resistance genes in Enterobacteriaceae
  publication-title: J Antimicrob Chemother
– volume: 324
  start-page: 1454
  year: 2009
  end-page: 7
  article-title: Hyper‐recombination, diversity, and antibiotic resistance in pneumococcus
  publication-title: Science
– volume: 19
  start-page: 260
  year: 2008
  end-page: 5
  article-title: Antibiotics and antibiotic resistance in water environments
  publication-title: Curr Opin Biotechnol
– volume: 40
  start-page: 277
  year: 2015
  end-page: 83
  article-title: The antibiotic resistance crisis: part 1: causes and threats
  publication-title: P T
– volume: 3
  start-page: 408
  year: 2012
  article-title: MexXY multidrug efflux system of
  publication-title: Front Microbiol
– volume: 35
  start-page: 322
  year: 2010
  end-page: 32
  article-title: Antibiotic resistance of bacterial biofilms
  publication-title: Int J Antimicrob Agents
– volume: 161
  start-page: 711
  year: 2010
  end-page: 9
  article-title: Ciliates rapidly enhance the frequency of conjugation between strains through bacterial accumulation in vesicles
  publication-title: Res Microbiol
– volume: 11
  start-page: 3034
  year: 2020
  article-title: Structure and mechanism of DNA delivery of a gene transfer agent
  publication-title: Nat Commun
– volume: 4
  start-page: 138
  year: 2013
  article-title: The antibiotic resistance “mobilome”: searching for the link between environment and clinic
  publication-title: Front Microbiol
– volume: 10
  year: 2015
  article-title: Fate of antibiotic resistant bacteria and genes during wastewater chlorination: implication for antibiotic resistance control
  publication-title: PLoS One
– volume: 54
  start-page: 689
  year: 2010
  end-page: 98
  article-title: Triclosan resistance of PAO1 is due to FabV, a triclosan‐resistant enoyl‐acyl carrier protein reductase
  publication-title: Antimicrob Agents Chemother
– volume: 43
  start-page: 709
  year: 2017
  end-page: 30
  article-title: The impact of insertion sequences on bacterial genome plasticity and adaptability
  publication-title: Crit Rev Microbiol
– volume: 56
  start-page: 5332
  year: 2012
  end-page: 9
  article-title: Identification of a novel genomic island conferring resistance to multiple aminoglycoside antibiotics in
  publication-title: Antimicrob Agents Chemother
– volume: 69
  start-page: 25
  year: 2020
  end-page: 76
  article-title: Gene transfer agents in symbiotic microbes
  publication-title: Results Probl Cell Differ
– volume: 4
  start-page: 1457
  year: 2019
  end-page: 64
  article-title: Plasmid‐encoded (X) genes that confer high‐level tigecycline resistance in
  publication-title: Nat Microbiol
– volume: 41
  start-page: 130
  year: 2013
  end-page: 6
  article-title: An adaptive response of to imipenem: regulation of porin balance in clinical isolates
  publication-title: Int J Antimicrob Agents
– volume: 161
  start-page: 335
  issue: SEP.15
  year: 2019
  end-page: 40
  article-title: β‐lactam resistance genes in bacteriophage and bacterial DNA from wastewater, river water, and irrigation water in Washington State
  publication-title: Water Res
– volume: 4
  start-page: 54
  year: 2016
  article-title: The structure and diversity of human, animal and environmental resistomes
  publication-title: Microbiome
– volume: 55
  start-page: 322
  year: 2006
  end-page: 9
  article-title: Antibiotic resistance of enterococci and related bacteria in an urban wastewater treatment plant
  publication-title: FEMS Microbiol Ecol
– volume: 187
  start-page: 969
  year: 2018
  end-page: 86
  article-title: Antibiotic use for acute respiratory tract infections (ARTI) in primary care; what factors affect prescribing and why is it important? A narrative review
  publication-title: Ir J Med Sci
– volume: 138
  start-page: 114
  year: 2019
  end-page: 21
  article-title: Dissemination of antibiotic resistance genes (ARGs) by rainfall on a cyclic economic breeding livestock farm
  publication-title: Int Biodeter Biodeger
– volume: 45
  start-page: 7855
  year: 2011
  end-page: 61
  article-title: Effect of various sludge digestion conditions on sulfonamide, macrolide, and tetracycline resistance genes and class I integrons
  publication-title: Environ Sci Technol
– volume: 126
  start-page: 383
  year: 2012
  end-page: 90
  article-title: Fate of tetracycline, sulfonamide and fluoroquinolone resistance genes and the changes in bacterial diversity during composting of swine manure
  publication-title: Bioresour Technol
– volume: 19
  start-page: 601
  year: 2019
  end-page: 10
  article-title: Effect of carbapenem resistance on outcomes of bloodstream infection caused by Enterobacteriaceae in low‐income and middle‐income countries (PANORAMA): a multinational prospective cohort study
  publication-title: Lancet Infect Dis
– volume: 11
  year: 2019
  article-title: Filamentous bacteriophages are associated with chronic lung infections and antibiotic resistance in cystic fibrosis
  publication-title: Sci Transl Med
– volume: 5
  start-page: 4498
  year: 2014
  article-title: A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
  publication-title: Nat Commun
– volume: 50
  start-page: 420
  year: 2016
  end-page: 7
  article-title: Metagenomic assembly reveals hosts of antibiotic resistance genes and the shared resistome in pig, chicken, and human feces
  publication-title: Environ Sci Technol
– volume: 274
  start-page: 287
  year: 2019
  end-page: 95
  article-title: Solid‐state anaerobic digestion facilitates the removal of antibiotic resistance genes and mobile genetic elements from cattle manure
  publication-title: Bioresour Technol
– volume: 9
  year: 2019
  article-title: Infectious phage particles packaging antibiotic resistance genes found in meat products and chicken feces
  publication-title: Sci Rep
– volume: 47
  start-page: 84
  year: 2015
  end-page: 7
  article-title: Emergence of scarlet fever emm12 clones in Hong Kong is associated with toxin acquisition and multidrug resistance
  publication-title: Nat Genet
– volume: 8
  start-page: s472
  year: 2003
  end-page: 83
  article-title: On the mechanism of solute uptake in
  publication-title: Front Biosci
– volume: 6
  start-page: 242
  year: 2015
  article-title: Genomics of microbial plasmids: classification and identification based on replication and transfer systems and host taxonomy
  publication-title: Front Microbiol
– volume: 6
  year: 2016
  article-title: Mechanism and effect of temperature on variations in antibiotic resistance genes during anaerobic digestion of dairy manure
  publication-title: Sci Rep
– volume: 11
  start-page: 46
  year: 2010
  article-title: Comparative metagenomic analysis of plasmid encoded functions in the human gut microbiome
  publication-title: BMC Genomics
– volume: 319
  year: 2021
  article-title: Intracellular versus extracellular antibiotic resistance genes in the environment: prevalence, horizontal transfer, and mitigation strategies
  publication-title: Bioresour Technol
– volume: 8
  start-page: 5859
  year: 2018
  article-title: Poultry hatcheries as potential reservoirs for antimicrobial‐resistant : a risk to public health and food safety
  publication-title: Sci Rep
– volume: 4
  start-page: 53
  year: 2013
  article-title: Effect of antimicrobial exposure on AcrAB expression in subspecies enterica serovar choleraesuis
  publication-title: Front Microbiol
– volume: 280
  start-page: 70
  year: 2019
  end-page: 8
  article-title: The behavior of antibiotic resistance genes and their associations with bacterial community during poultry manure composting
  publication-title: Bioresour Technol
– volume: 70
  start-page: 462
  year: 2008
  end-page: 78
  article-title: Clinically relevant mutations that cause derepression of the MtrC–MtrD–MtrE efflux pump system confer different levels of antimicrobial resistance and in vivo fitness
  publication-title: Mol Microbiol
– volume: 5
  year: 2016
  article-title: Epidemiology and burden of multidrug‐resistant bacterial infection in a developing country
  publication-title: eLife
– volume: 6
  start-page: 34
  year: 2015
  article-title: Mechanisms of antibiotic resistance
  publication-title: Front Microbiol
– volume: 10
  start-page: 578
  year: 2010
  end-page: 9
  article-title: Emergence of a new antibiotic resistance mechanism in India, Pakistan, and the UK: a molecular, biological, and epidemiological study
  publication-title: Lancet Infect Dis
– volume: 53
  start-page: 13898
  year: 2019
  end-page: 905
  article-title: Sewage from airplanes exhibits high abundance and diversity of antibiotic resistance genes
  publication-title: Environ Sci Technol
– volume: 21
  start-page: 390
  year: 2000
  end-page: 3
  article-title: Potential dissemination of antibiotic resistance genes from transgenic plants to microorganisms
  publication-title: Infect Control Hosp Epidemiol
– volume: 25
  start-page: 661
  year: 2012
  end-page: 81
  article-title: Adaptive and mutational resistance: role of porins and efflux pumps in drug resistance
  publication-title: Clin Microbiol Rev
– volume: 6
  year: 2010
  article-title: Two novel point mutations in clinical reduce linezolid susceptibility and switch on the stringent response to promote persistent infection
  publication-title: PLoS Pathog
– volume: 138
  year: 2020
  article-title: Integrated metagenomic and metatranscriptomic profiling reveals differentially expressed resistomes in human, chicken, and pig gut microbiomes
  publication-title: Environ Int
– volume: 5
  start-page: 74
  issue: 2
  year: 2018
  end-page: 9
  article-title: Seasonal disparities in airborne bacteria and associated antibiotic resistance genes in PM2.5 between urban and rural sites
  publication-title: Environ Sci Technol Lett
– volume: 2
  year: 2017
  article-title: Comprehensive resistome analysis reveals the prevalence of NDM and MCR‐1 in Chinese poultry production
  publication-title: Nat Microbiol
– volume: 147
  start-page: 3403
  year: 2001
  end-page: 12
  article-title: Genes encoding bile salt hydrolases and conjugated bile salt transporters in 100–100 and other species
  publication-title: Microbiology
– volume: 12
  start-page: 512
  year: 2011
  article-title: Whole genome analysis of linezolid resistance in reveals resistance and compensatory mutations
  publication-title: BMC Genomics
– volume: 344
  start-page: 716
  year: 2018
  end-page: 22
  article-title: Diversity, abundance, and persistence of antibiotic resistance genes in various types of animal manure following industrial composting
  publication-title: J Hazard Mater
– volume: 14
  start-page: 742
  year: 2014
  end-page: 50
  article-title: Global antibiotic consumption 2000 to 2010: an analysis of national pharmaceutical sales data
  publication-title: Lancet Infect Dis
– volume: 31
  year: 2018
  article-title: Mobile genetic elements associated with antimicrobial resistance
  publication-title: Clin Microbiol Rev
– volume: 10
  start-page: 595
  year: 2019
  article-title: Identification and characterization of a direct activator of a gene transfer agent
  publication-title: Nat Commun
– year: 2017
– volume: 320
  start-page: 100
  year: 2008
  end-page: 3
  article-title: Bacteria subsisting on antibiotic
  publication-title: Science
– volume: 6
  year: 2011
  article-title: Antibiotic resistance genes in the bacteriophage DNA fraction of environmental samples
  publication-title: PLoS One
– volume: 8
  start-page: 1293
  year: 2020
  article-title: Antibiotic resistance genes in phage particles from antarctic and mediterranean seawater ecosystems
  publication-title: Microorganisms
– volume: 23
  start-page: 160
  year: 2010
  end-page: 201
  article-title: Three decades of beta‐lactamase inhibitors
  publication-title: Clin Microbiol Rev
– volume: 79
  start-page: 1
  year: 2015
  end-page: 7
  article-title: Transfer of antibiotic‐resistance genes via phage‐related mobile elements
  publication-title: Plasmid
– ident: e_1_2_9_127_1
  doi: 10.3389/fmicb.2012.00399
– ident: e_1_2_9_156_1
  doi: 10.1371/journal.pone.0227973
– ident: e_1_2_9_15_1
  doi: 10.1126/science.1155157
– ident: e_1_2_9_78_1
  doi: 10.1016/j.scitotenv.2019.134446
– ident: e_1_2_9_141_1
  doi: 10.1111/j.1574-6941.2005.00032.x
– ident: e_1_2_9_126_1
  doi: 10.1128/mBio.01918-14
– ident: e_1_2_9_59_1
  doi: 10.1016/j.envpol.2021.117402
– ident: e_1_2_9_60_1
  doi: 10.1016/j.chemosphere.2010.10.026
– ident: e_1_2_9_29_1
  doi: 10.3389/fmicb.2013.00194
– ident: e_1_2_9_61_1
  doi: 10.1016/j.ibiod.2019.01.009
– ident: e_1_2_9_82_1
  doi: 10.1186/s13059-020-01964-x
– ident: e_1_2_9_18_1
  doi: 10.1038/nature10388
– ident: e_1_2_9_125_1
  doi: 10.1038/nmicrobiol.2016.260
– ident: e_1_2_9_33_1
  doi: 10.1128/AAC.00084-08
– ident: e_1_2_9_12_1
  doi: 10.1093/cid/ciy955
– ident: e_1_2_9_146_1
  doi: 10.1016/j.biortech.2019.02.030
– ident: e_1_2_9_28_1
  doi: 10.3389/fmicb.2013.00053
– ident: e_1_2_9_16_1
  doi: 10.3389/fmicb.2013.00138
– ident: e_1_2_9_130_1
  doi: 10.1016/j.envpol.2016.01.007
– ident: e_1_2_9_31_1
  doi: 10.1128/AAC.49.10.4390-4392.2005
– ident: e_1_2_9_86_1
  doi: 10.1016/j.ecoenv.2020.110567
– ident: e_1_2_9_153_1
  doi: 10.1016/j.jmb.2019.06.033
– ident: e_1_2_9_50_1
  doi: 10.1098/rspb.2011.1933
– ident: e_1_2_9_136_1
  doi: 10.1016/j.biortech.2012.03.045
– ident: e_1_2_9_9_1
  doi: 10.1016/S1473-3099(18)30605-4
– ident: e_1_2_9_51_1
  doi: 10.1126/science.1171908
– ident: e_1_2_9_69_1
  doi: 10.1128/AAC.00535-11
– ident: e_1_2_9_44_1
  doi: 10.1073/pnas.1606590113
– ident: e_1_2_9_57_1
  doi: 10.1038/s41545-020-0051-0
– ident: e_1_2_9_14_1
  doi: 10.1086/501779
– ident: e_1_2_9_121_1
  doi: 10.1186/s12879-016-2050-9
– ident: e_1_2_9_79_1
  doi: 10.1021/acs.est.9b03236
– ident: e_1_2_9_118_1
  doi: 10.1016/j.ijantimicag.2009.12.011
– ident: e_1_2_9_19_1
  doi: 10.1128/AAC.01152-09
– ident: e_1_2_9_53_1
  doi: 10.1016/j.jtbi.2020.110524
– ident: e_1_2_9_68_1
  doi: 10.1073/pnas.1503141112
– ident: e_1_2_9_97_1
  doi: 10.1038/ncomms5498
– ident: e_1_2_9_32_1
  doi: 10.1111/j.1574-6968.2004.tb09766.x
– ident: e_1_2_9_92_1
  doi: 10.1016/j.tim.2017.02.012
– ident: e_1_2_9_42_1
  doi: 10.1128/AAC.00809-12
– ident: e_1_2_9_25_1
  doi: 10.1016/j.ijantimicag.2012.08.010
– ident: e_1_2_9_93_1
  doi: 10.1126/science.aat5867
– ident: e_1_2_9_95_1
  doi: 10.1016/j.tim.2017.05.011
– ident: e_1_2_9_8_1
  doi: 10.1007/978-3-662-09259-0_12
– ident: e_1_2_9_104_1
  doi: 10.1126/science.1192243
– ident: e_1_2_9_139_1
  doi: 10.2166/wh.2009.159
– ident: e_1_2_9_102_1
  doi: 10.1038/nrmicro2802
– ident: e_1_2_9_30_1
  doi: 10.1111/j.1365-2958.2008.06424.x
– ident: e_1_2_9_96_1
  doi: 10.1038/ncomms13333
– ident: e_1_2_9_23_1
  doi: 10.1039/c0cc05111j
– ident: e_1_2_9_84_1
  doi: 10.1021/acs.estlett.7b00561
– ident: e_1_2_9_135_1
  doi: 10.1021/es504157v
– ident: e_1_2_9_7_1
– ident: e_1_2_9_143_1
  doi: 10.1016/j.cej.2019.04.207
– ident: e_1_2_9_87_1
  doi: 10.1128/CMR.00088-17
– ident: e_1_2_9_27_1
  doi: 10.3389/fmicb.2012.00408
– ident: e_1_2_9_114_1
  doi: 10.1111/j.1574-6968.2006.00629.x
– ident: e_1_2_9_40_1
  doi: 10.1016/j.tim.2011.09.005
– ident: e_1_2_9_120_1
  doi: 10.1016/j.envres.2018.11.040
– ident: e_1_2_9_62_1
  doi: 10.1016/j.jhazmat.2017.11.020
– ident: e_1_2_9_6_1
  doi: 10.1016/j.chemosphere.2006.03.026
– ident: e_1_2_9_46_1
  doi: 10.1126/scitranslmed.aau9748
– ident: e_1_2_9_105_1
  doi: 10.1073/pnas.71.3.971
– ident: e_1_2_9_138_1
  doi: 10.1038/srep30237
– ident: e_1_2_9_72_1
  doi: 10.3390/microorganisms8091293
– ident: e_1_2_9_17_1
  doi: 10.1371/journal.pone.0034953
– ident: e_1_2_9_36_1
  doi: 10.1371/journal.ppat.1000944
– ident: e_1_2_9_110_1
  doi: 10.1007/978-3-030-51849-3_2
– ident: e_1_2_9_2_1
  doi: 10.1038/nrmicro1614
– ident: e_1_2_9_83_1
  doi: 10.1016/j.envint.2019.104936
– ident: e_1_2_9_149_1
  doi: 10.1016/j.chemosphere.2013.08.068
– ident: e_1_2_9_147_1
  doi: 10.1021/es200827t
– ident: e_1_2_9_94_1
  doi: 10.1038/ng.3147
– ident: e_1_2_9_66_1
  doi: 10.1021/acs.est.5b03522
– ident: e_1_2_9_22_1
  doi: 10.1146/annurev.biochem.78.082907.145923
– ident: e_1_2_9_108_1
  doi: 10.1093/gbe/evy005
– ident: e_1_2_9_73_1
  doi: 10.1016/j.watres.2019.06.026
– ident: e_1_2_9_100_1
  doi: 10.1016/0003-9861(77)90508-2
– ident: e_1_2_9_119_1
  doi: 10.1093/genetics/162.4.1525
– ident: e_1_2_9_151_1
  doi: 10.1016/j.cell.2019.09.015
– ident: e_1_2_9_113_1
  doi: 10.1099/00221287-147-12-3403
– ident: e_1_2_9_134_1
  doi: 10.1007/s11845-018-1774-5
– ident: e_1_2_9_124_1
  doi: 10.1289/EHP35
– ident: e_1_2_9_4_1
  doi: 10.1016/S1473-3099(14)70780-7
– ident: e_1_2_9_45_1
  doi: 10.1016/j.tim.2019.05.003
– ident: e_1_2_9_140_1
  doi: 10.2175/193864709793955735
– ident: e_1_2_9_74_1
  doi: 10.1186/s40168-020-00863-4
– ident: e_1_2_9_11_1
  doi: 10.7554/eLife.18082
– ident: e_1_2_9_37_1
  doi: 10.1128/AAC.00131-06
– ident: e_1_2_9_58_1
  doi: 10.1016/j.biortech.2020.124181
– ident: e_1_2_9_71_1
  doi: 10.1371/journal.pone.0017549
– ident: e_1_2_9_43_1
  doi: 10.1128/mBio.01975-15
– volume: 65
  start-page: 34
  year: 2019
  ident: e_1_2_9_48_1
  article-title: Horizontal transfer of antibiotic resistance genes in clinical environments
  publication-title: J Microbiol
– ident: e_1_2_9_106_1
  doi: 10.1038/s41467-020-16669-9
– ident: e_1_2_9_81_1
  doi: 10.1016/j.chemosphere.2018.09.066
– ident: e_1_2_9_24_1
  doi: 10.2741/1075
– ident: e_1_2_9_76_1
  doi: 10.1016/j.scitotenv.2018.01.148
– volume: 40
  start-page: 277
  year: 2015
  ident: e_1_2_9_132_1
  article-title: The antibiotic resistance crisis: part 1: causes and threats
  publication-title: P T
– ident: e_1_2_9_47_1
  doi: 10.1016/j.cell.2019.11.021
– ident: e_1_2_9_70_1
  doi: 10.1007/s00705-021-05024-y
– ident: e_1_2_9_137_1
  doi: 10.1016/j.biortech.2018.09.013
– ident: e_1_2_9_90_1
  doi: 10.1093/jac/dkx488
– ident: e_1_2_9_129_1
  doi: 10.1016/j.scitotenv.2018.10.446
– ident: e_1_2_9_55_1
  doi: 10.1007/s00438-019-01531-5
– ident: e_1_2_9_26_1
  doi: 10.1016/j.ijantimicag.2012.10.010
– ident: e_1_2_9_54_1
  doi: 10.1590/S1517-83822014005000042
– ident: e_1_2_9_77_1
  doi: 10.1128/AAC.01684-13
– ident: e_1_2_9_107_1
  doi: 10.1038/s41467-019-08526-1
– ident: e_1_2_9_131_1
– ident: e_1_2_9_128_1
  doi: 10.1073/pnas.1222743110
– ident: e_1_2_9_101_1
  doi: 10.1016/j.plasmid.2015.01.001
– ident: e_1_2_9_112_1
  doi: 10.1186/1471-2164-11-46
– ident: e_1_2_9_63_1
  doi: 10.1016/j.envint.2013.08.023
– ident: e_1_2_9_75_1
  doi: 10.1038/s41598-019-49898-0
– ident: e_1_2_9_122_1
  doi: 10.1128/AEM.01682-13
– ident: e_1_2_9_35_1
  doi: 10.1186/1471-2164-12-512
– ident: e_1_2_9_117_1
  doi: 10.1016/j.resmic.2010.07.004
– ident: e_1_2_9_88_1
  doi: 10.1080/1040841X.2017.1303661
– ident: e_1_2_9_21_1
  doi: 10.1128/CMR.00043-12
– ident: e_1_2_9_98_1
  doi: 10.1038/s41467-018-07992-3
– ident: e_1_2_9_3_1
  doi: 10.1016/j.copbio.2008.05.006
– ident: e_1_2_9_20_1
  doi: 10.1128/AAC.02005-12
– ident: e_1_2_9_80_1
  doi: 10.1186/s40168-016-0199-5
– ident: e_1_2_9_111_1
  doi: 10.1093/dnares/dsm018
– ident: e_1_2_9_145_1
  doi: 10.1111/jam.12653
– ident: e_1_2_9_115_1
  doi: 10.1016/S0168-6496(99)00079-3
– ident: e_1_2_9_144_1
  doi: 10.1016/j.scitotenv.2014.02.027
– ident: e_1_2_9_150_1
  doi: 10.1128/CMR.00066-18
– ident: e_1_2_9_49_1
  doi: 10.1042/EBC20160063
– ident: e_1_2_9_154_1
  doi: 10.1128/CMR.00037-09
– ident: e_1_2_9_52_1
  doi: 10.1016/S1473-3099(10)70143-2
– ident: e_1_2_9_13_1
– ident: e_1_2_9_116_1
  doi: 10.1016/j.jhazmat.2020.123961
– ident: e_1_2_9_155_1
  doi: 10.1021/acschembio.7b00687
– ident: e_1_2_9_99_1
  doi: 10.1146/annurev-virology-101416-041624
– ident: e_1_2_9_34_1
  doi: 10.3389/fmicb.2015.00034
– ident: e_1_2_9_89_1
  doi: 10.3389/fmicb.2015.00242
– ident: e_1_2_9_10_1
  doi: 10.1016/S1473-3099(18)30792-8
– ident: e_1_2_9_67_1
  doi: 10.1016/j.envint.2020.105649
– volume: 10
  start-page: e0119403
  year: 2015
  ident: e_1_2_9_148_1
  article-title: Fate of antibiotic resistant bacteria and genes during wastewater chlorination: implication for antibiotic resistance control
  publication-title: PLoS One
  doi: 10.1371/journal.pone.0119403
– ident: e_1_2_9_85_1
  doi: 10.1021/acs.est.8b02204
– ident: e_1_2_9_133_1
– ident: e_1_2_9_65_1
  doi: 10.1016/j.jhazmat.2015.10.037
– ident: e_1_2_9_152_1
  doi: 10.1038/nbt.4203
– ident: e_1_2_9_39_1
  doi: 10.1111/j.1469-0691.2007.01857.x
– ident: e_1_2_9_91_1
  doi: 10.1038/s41564-019-0496-4
– ident: e_1_2_9_56_1
  doi: 10.1038/nature14098
– ident: e_1_2_9_109_1
  doi: 10.1371/journal.pone.0107176
– ident: e_1_2_9_38_1
  doi: 10.1093/clinids/10.4.677
– ident: e_1_2_9_5_1
  doi: 10.1021/acs.est.5b00729
– ident: e_1_2_9_41_1
  doi: 10.1016/j.addr.2005.04.002
– ident: e_1_2_9_103_1
  doi: 10.1371/journal.pgen.1003393
– ident: e_1_2_9_123_1
  doi: 10.1016/j.scitotenv.2019.06.081
– ident: e_1_2_9_64_1
  doi: 10.1038/s41598-018-23962-7
– ident: e_1_2_9_142_1
  doi: 10.1016/j.biortech.2015.12.030
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Snippet The production and use of antibiotics are becoming increasingly common worldwide, and the problem of antibiotic resistance is increasing alarmingly....
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SubjectTerms air
aircraft
Anti-Bacterial Agents - pharmacology
antibiotic resistance
antibiotic resistance genes
antimicrobial resistance
Bacteria - genetics
Bacterial Infections
bacteriophages
Drug Resistance, Microbial
drug‐resistant bacteria
feces
Genes, Bacterial
horizontal gene transfer
Humans
mechanism of action
migratory birds
multidrug resistance
multiple drug resistance
plasmids
wastewater
Title Antibiotic resistance genes in bacteria: Occurrence, spread, and control
URI https://onlinelibrary.wiley.com/doi/abs/10.1002%2Fjobm.202100201
https://www.ncbi.nlm.nih.gov/pubmed/34651331
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Volume 61
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