A phylogenetically distinct lineage of Pyrenopeziza brassicae associated with chlorotic leaf spot of Brassicaceae in North America
Light leaf spot, caused by the ascomycete Pyrenopeziza brassicae, is an established disease of Brassicaceae in the United Kingdom (UK), continental Europe, and Oceania (OC, including New Zealand and Australia). The disease was reported in North America (NA) for the first time in 2014 on Brassica spp...
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| Published in | Plant pathology Vol. 69; no. 3; pp. 518 - 537 |
|---|---|
| Main Authors | , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
England
Wiley Subscription Services, Inc
01.04.2020
John Wiley and Sons Inc |
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| Abstract | Light leaf spot, caused by the ascomycete Pyrenopeziza brassicae, is an established disease of Brassicaceae in the United Kingdom (UK), continental Europe, and Oceania (OC, including New Zealand and Australia). The disease was reported in North America (NA) for the first time in 2014 on Brassica spp. in the Willamette Valley of western Oregon, followed by detection in Brassica juncea cover crops and on Brassica rapa weeds in northwestern Washington in 2016. Preliminary DNA sequence data and field observations suggest that isolates of the pathogen present in NA might be distinct from those in the UK, continental Europe, and OC. Comparisons of isolates from these regions using genetic (multilocus sequence analysis, MAT gene sequences, and rep‐PCR DNA fingerprinting), pathogenic (B. rapa inoculation studies), biological (sexual compatibility), and morphological (colony and conidial morphology) analyses demonstrated two genetically distinct evolutionary lineages. Lineage 1 comprised isolates from the UK, continental Europe, and OC, and included the P. brassicae type specimen. Lineage 2 contained the NA isolates associated with recent disease outbreaks in the Pacific Northwest region of the USA. Symptoms caused by isolates of the two lineages on B. rapa and B. juncea differed, and therefore “chlorotic leaf spot” is proposed for the disease caused by Lineage 2 isolates of P. brassicae. Isolates of the two lineages differed in genetic diversity as well as sensitivity to the fungicides carbendazim and prothioconazole.
Pyrenopeziza brassicae was first found on Brassica spp. in North America (NA) in 2014. The consolidated species concept showed NA isolates are in a distinct evolutionary lineage compared to isolates from continental Europe and the UK. |
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| AbstractList | Light leaf spot, caused by the ascomycete Pyrenopeziza brassicae, is an established disease of Brassicaceae in the United Kingdom (UK), continental Europe, and Oceania (OC, including New Zealand and Australia). The disease was reported in North America (NA) for the first time in 2014 on Brassica spp. in the Willamette Valley of western Oregon, followed by detection in Brassica juncea cover crops and on Brassica rapa weeds in northwestern Washington in 2016. Preliminary DNA sequence data and field observations suggest that isolates of the pathogen present in NA might be distinct from those in the UK, continental Europe, and OC. Comparisons of isolates from these regions using genetic (multilocus sequence analysis, MAT gene sequences, and rep‐PCR DNA fingerprinting), pathogenic (B. rapa inoculation studies), biological (sexual compatibility), and morphological (colony and conidial morphology) analyses demonstrated two genetically distinct evolutionary lineages. Lineage 1 comprised isolates from the UK, continental Europe, and OC, and included the P. brassicae type specimen. Lineage 2 contained the NA isolates associated with recent disease outbreaks in the Pacific Northwest region of the USA. Symptoms caused by isolates of the two lineages on B. rapa and B. juncea differed, and therefore “chlorotic leaf spot” is proposed for the disease caused by Lineage 2 isolates of P. brassicae. Isolates of the two lineages differed in genetic diversity as well as sensitivity to the fungicides carbendazim and prothioconazole. Light leaf spot, caused by the ascomycete Pyrenopeziza brassicae, is an established disease of Brassicaceae in the United Kingdom (UK), continental Europe, and Oceania (OC, including New Zealand and Australia). The disease was reported in North America (NA) for the first time in 2014 on Brassica spp. in the Willamette Valley of western Oregon, followed by detection in Brassica juncea cover crops and on Brassica rapa weeds in northwestern Washington in 2016. Preliminary DNA sequence data and field observations suggest that isolates of the pathogen present in NA might be distinct from those in the UK, continental Europe, and OC. Comparisons of isolates from these regions using genetic (multilocus sequence analysis, MAT gene sequences, and rep‐PCR DNA fingerprinting), pathogenic (B. rapa inoculation studies), biological (sexual compatibility), and morphological (colony and conidial morphology) analyses demonstrated two genetically distinct evolutionary lineages. Lineage 1 comprised isolates from the UK, continental Europe, and OC, and included the P. brassicae type specimen. Lineage 2 contained the NA isolates associated with recent disease outbreaks in the Pacific Northwest region of the USA. Symptoms caused by isolates of the two lineages on B. rapa and B. juncea differed, and therefore “chlorotic leaf spot” is proposed for the disease caused by Lineage 2 isolates of P. brassicae. Isolates of the two lineages differed in genetic diversity as well as sensitivity to the fungicides carbendazim and prothioconazole. Pyrenopeziza brassicae was first found on Brassica spp. in North America (NA) in 2014. The consolidated species concept showed NA isolates are in a distinct evolutionary lineage compared to isolates from continental Europe and the UK. Light leaf spot, caused by the ascomycete Pyrenopeziza brassicae , is an established disease of Brassicaceae in the United Kingdom (UK), continental Europe, and Oceania (OC, including New Zealand and Australia). The disease was reported in North America (NA) for the first time in 2014 on Brassica spp. in the Willamette Valley of western Oregon, followed by detection in Brassica juncea cover crops and on Brassica rapa weeds in northwestern Washington in 2016. Preliminary DNA sequence data and field observations suggest that isolates of the pathogen present in NA might be distinct from those in the UK, continental Europe, and OC. Comparisons of isolates from these regions using genetic (multilocus sequence analysis, MAT gene sequences, and rep‐PCR DNA fingerprinting), pathogenic ( B. rapa inoculation studies), biological (sexual compatibility), and morphological (colony and conidial morphology) analyses demonstrated two genetically distinct evolutionary lineages. Lineage 1 comprised isolates from the UK, continental Europe, and OC, and included the P. brassicae type specimen. Lineage 2 contained the NA isolates associated with recent disease outbreaks in the Pacific Northwest region of the USA. Symptoms caused by isolates of the two lineages on B. rapa and B. juncea differed, and therefore “chlorotic leaf spot” is proposed for the disease caused by Lineage 2 isolates of P. brassicae . Isolates of the two lineages differed in genetic diversity as well as sensitivity to the fungicides carbendazim and prothioconazole. Pyrenopeziza brassicae was first found on Brassica spp. in North America (NA) in 2014. The consolidated species concept showed NA isolates are in a distinct evolutionary lineage compared to isolates from continental Europe and the UK. Abstract Light leaf spot, caused by the ascomycete Pyrenopeziza brassicae , is an established disease of Brassicaceae in the United Kingdom (UK), continental Europe, and Oceania (OC, including New Zealand and Australia). The disease was reported in North America (NA) for the first time in 2014 on Brassica spp. in the Willamette Valley of western Oregon, followed by detection in Brassica juncea cover crops and on Brassica rapa weeds in northwestern Washington in 2016. Preliminary DNA sequence data and field observations suggest that isolates of the pathogen present in NA might be distinct from those in the UK, continental Europe, and OC. Comparisons of isolates from these regions using genetic (multilocus sequence analysis, MAT gene sequences, and rep‐PCR DNA fingerprinting), pathogenic ( B. rapa inoculation studies), biological (sexual compatibility), and morphological (colony and conidial morphology) analyses demonstrated two genetically distinct evolutionary lineages. Lineage 1 comprised isolates from the UK, continental Europe, and OC, and included the P. brassicae type specimen. Lineage 2 contained the NA isolates associated with recent disease outbreaks in the Pacific Northwest region of the USA. Symptoms caused by isolates of the two lineages on B. rapa and B. juncea differed, and therefore “chlorotic leaf spot” is proposed for the disease caused by Lineage 2 isolates of P. brassicae . Isolates of the two lineages differed in genetic diversity as well as sensitivity to the fungicides carbendazim and prothioconazole. Light leaf spot, caused by the ascomycete , is an established disease of Brassicaceae in the United Kingdom (UK), continental Europe, and Oceania (OC, including New Zealand and Australia). The disease was reported in North America (NA) for the first time in 2014 on spp. in the Willamette Valley of western Oregon, followed by detection in cover crops and on weeds in northwestern Washington in 2016. Preliminary DNA sequence data and field observations suggest that isolates of the pathogen present in NA might be distinct from those in the UK, continental Europe, and OC. Comparisons of isolates from these regions using genetic (multilocus sequence analysis, gene sequences, and rep-PCR DNA fingerprinting), pathogenic ( inoculation studies), biological (sexual compatibility), and morphological (colony and conidial morphology) analyses demonstrated two genetically distinct evolutionary lineages. Lineage 1 comprised isolates from the UK, continental Europe, and OC, and included the type specimen. Lineage 2 contained the NA isolates associated with recent disease outbreaks in the Pacific Northwest region of the USA. Symptoms caused by isolates of the two lineages on and differed, and therefore "chlorotic leaf spot" is proposed for the disease caused by Lineage 2 isolates of . Isolates of the two lineages differed in genetic diversity as well as sensitivity to the fungicides carbendazim and prothioconazole. |
| Author | King, Kevin M. Carmody, Shannon M. Ocamb, Cynthia M. Fraaije, Bart A. du Toit, Lindsey J. West, Jon S. |
| AuthorAffiliation | 3 Department of Botany and Plant Pathology Oregon State University Corvallis OR USA 1 Department of Plant Pathology Washington State University Mount Vernon WA USA 2 Rothamsted Research Harpenden UK |
| AuthorAffiliation_xml | – name: 3 Department of Botany and Plant Pathology Oregon State University Corvallis OR USA – name: 2 Rothamsted Research Harpenden UK – name: 1 Department of Plant Pathology Washington State University Mount Vernon WA USA |
| Author_xml | – sequence: 1 givenname: Shannon M. surname: Carmody fullname: Carmody, Shannon M. organization: Washington State University – sequence: 2 givenname: Kevin M. orcidid: 0000-0002-9928-1353 surname: King fullname: King, Kevin M. organization: Rothamsted Research – sequence: 3 givenname: Cynthia M. surname: Ocamb fullname: Ocamb, Cynthia M. organization: Oregon State University – sequence: 4 givenname: Bart A. orcidid: 0000-0001-8176-2258 surname: Fraaije fullname: Fraaije, Bart A. organization: Rothamsted Research – sequence: 5 givenname: Jon S. orcidid: 0000-0002-5211-2405 surname: West fullname: West, Jon S. organization: Rothamsted Research – sequence: 6 givenname: Lindsey J. orcidid: 0000-0002-0602-835X surname: du Toit fullname: du Toit, Lindsey J. email: dutoit@wsu.edu organization: Washington State University |
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| Cites_doi | 10.1016/S0007-1536(84)80012-1 10.1023/A:1015659527542 10.1111/j.1471-8286.2006.01404.x 10.1016/j.tree.2004.07.021 10.1002/ps.3585 10.1080/00173134.2011.653401 10.1093/molbev/msw054 10.1111/j.1365-3059.1993.tb01544.x 10.1016/j.fgb.2010.05.004 10.1016/S0007-1536(82)80049-1 10.1038/nmeth.2109 10.1146/annurev-phyto-080614-120245 10.1111/mpp.12106 10.1023/A:1026111030426 10.1007/s10658-007-9141-9 10.1046/j.1365-3059.1998.00204.x 10.1078/1439-6092-00069 10.1071/CP16445 10.1016/S0007-1536(78)80070-9 10.1111/j.1365-3059.2011.02529.x 10.1111/j.1744-7348.1998.tb05816.x 10.1094/PHYTO.2001.91.4.392 10.1046/j.1365-2958.1998.01112.x 10.1080/00275514.2000.12061187 10.1016/S0007-1536(87)80074-8 |
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| Copyright | 2019 The Authors. published by John Wiley & Sons Ltd on behalf of British Society for Plant Pathology. 2019 The Authors. Plant Pathology published by John Wiley & Sons Ltd on behalf of British Society for Plant Pathology. Plant Pathology © 2020 British Society for Plant Pathology |
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| Keywords | Pyrenopeziza brassicae chlorotic leaf spot light leaf spot Brassicaceae phylogenetic lineage Pacific Northwest USA |
| Language | English |
| License | Attribution 2019 The Authors. Plant Pathology published by John Wiley & Sons Ltd on behalf of British Society for Plant Pathology. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
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| Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 Shannon M. Carmody and Kevin M. King contributed equally to this work. |
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| Snippet | Light leaf spot, caused by the ascomycete Pyrenopeziza brassicae, is an established disease of Brassicaceae in the United Kingdom (UK), continental Europe, and... Light leaf spot, caused by the ascomycete , is an established disease of Brassicaceae in the United Kingdom (UK), continental Europe, and Oceania (OC,... Abstract Light leaf spot, caused by the ascomycete Pyrenopeziza brassicae , is an established disease of Brassicaceae in the United Kingdom (UK), continental... Light leaf spot, caused by the ascomycete Pyrenopeziza brassicae , is an established disease of Brassicaceae in the United Kingdom (UK), continental Europe,... |
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| SubjectTerms | Agricultural practices Brassica Brassica rapa Brassicaceae Carbendazim chlorotic leaf spot Cover crops Deoxyribonucleic acid DNA DNA fingerprinting Evolution Fungicides Gene sequencing Genetic analysis Genetic diversity Genetic fingerprinting Inoculation Leafspot light leaf spot MAT protein Morphology Nucleotide sequence Original Pacific Northwest USA phylogenetic lineage Phylogeny Pyrenopeziza brassicae Sequence analysis Signs and symptoms Spot |
| Title | A phylogenetically distinct lineage of Pyrenopeziza brassicae associated with chlorotic leaf spot of Brassicaceae in North America |
| URI | https://onlinelibrary.wiley.com/doi/abs/10.1111%2Fppa.13137 https://www.ncbi.nlm.nih.gov/pubmed/32194292 https://www.proquest.com/docview/2369063332 https://search.proquest.com/docview/2381623167 https://pubmed.ncbi.nlm.nih.gov/PMC7074063 |
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