QTL analysis of tuber shape in a diploid potato population

Tuber shape is one of the most important traits for potato breeding. Since poor or irregular shape increases the difficulty of handling and processing, researching the inheritance of potato tuber shape for potato breeding is highly important. To efficiently identify QTL for tuber shape, a diploid po...

Full description

Saved in:
Bibliographic Details
Published inFrontiers in plant science Vol. 13; p. 1046287
Main Authors Huang, Wei, Dong, Jianke, Zhao, Xijuan, Zhao, Zhiyuan, Li, Chunyan, Li, Jingcai, Song, Botao
Format Journal Article
LanguageEnglish
Published Frontiers Media S.A 10.11.2022
Subjects
marker development
Plant Science
potato
QTL-seq
self-pollinated
tuber shape
Online AccessGet full text

Cover

Abstract Tuber shape is one of the most important traits for potato breeding. Since poor or irregular shape increases the difficulty of handling and processing, researching the inheritance of potato tuber shape for potato breeding is highly important. To efficiently identify QTL for tuber shape, a diploid potato population (PM7) was generated by self-pollinated M6 ( S. chacoense ). A QTL TScha6 for tuber shape was identified by the QTL-seq approach at 50.91-59.93 Mb on chromosome 6 in the potato DM reference genome. To confirm TScha6, four SSR and twenty CAPS markers around the QTL were developed and the TScha6 was narrowed down to an interval of ~ 1.85 Mb. The CAPS marker C6-58.27_665 linked to TScha6 was then used to screen 86 potato cultivars and advanced breeding lines. The tuber length/width (LW) ratio was significantly correlated with the presence/absence of C6-58.27_665, and the correlation coefficient was r = 0.55 (p < 0.01). These results showed that C6-58.27_665 could be applied in marker-assisted selection (MAS) for tuber shape breeding in the future. Our research sets the important stage for the future cloning of the tuber shape gene and utilities of the marker in the breeding program.
AbstractList Tuber shape is one of the most important traits for potato breeding. Since poor or irregular shape increases the difficulty of handling and processing, researching the inheritance of potato tuber shape for potato breeding is highly important. To efficiently identify QTL for tuber shape, a diploid potato population (PM7) was generated by self-pollinated M6 ( S. chacoense ). A QTL TScha6 for tuber shape was identified by the QTL-seq approach at 50.91-59.93 Mb on chromosome 6 in the potato DM reference genome. To confirm TScha6, four SSR and twenty CAPS markers around the QTL were developed and the TScha6 was narrowed down to an interval of ~ 1.85 Mb. The CAPS marker C6-58.27_665 linked to TScha6 was then used to screen 86 potato cultivars and advanced breeding lines. The tuber length/width (LW) ratio was significantly correlated with the presence/absence of C6-58.27_665, and the correlation coefficient was r = 0.55 (p < 0.01). These results showed that C6-58.27_665 could be applied in marker-assisted selection (MAS) for tuber shape breeding in the future. Our research sets the important stage for the future cloning of the tuber shape gene and utilities of the marker in the breeding program.
Tuber shape is one of the most important traits for potato breeding. Since poor or irregular shape increases the difficulty of handling and processing, researching the inheritance of potato tuber shape for potato breeding is highly important. To efficiently identify QTL for tuber shape, a diploid potato population (PM7) was generated by self-pollinated M6 (S. chacoense). A QTL TScha6 for tuber shape was identified by the QTL-seq approach at 50.91-59.93 Mb on chromosome 6 in the potato DM reference genome. To confirm TScha6, four SSR and twenty CAPS markers around the QTL were developed and the TScha6 was narrowed down to an interval of ~ 1.85 Mb. The CAPS marker C6-58.27_665 linked to TScha6 was then used to screen 86 potato cultivars and advanced breeding lines. The tuber length/width (LW) ratio was significantly correlated with the presence/absence of C6-58.27_665, and the correlation coefficient was r = 0.55 (p < 0.01). These results showed that C6-58.27_665 could be applied in marker-assisted selection (MAS) for tuber shape breeding in the future. Our research sets the important stage for the future cloning of the tuber shape gene and utilities of the marker in the breeding program.
Author Zhao, Xijuan
Huang, Wei
Li, Jingcai
Dong, Jianke
Zhao, Zhiyuan
Li, Chunyan
Song, Botao
AuthorAffiliation 2 Forestry and Fruit Research Institute, Wuhan Academy of Agricultural Sciences , Wuhan, Hubei , China
3 College of Biology and Agricultural Resources, Huanggang Normal University/Hubei Key Laboratory of Economic Forest Germplasm Improvement and Resources Comprehensive Utilization , Huanggang, Hubei , China
1 Key Laboratory of Horticultural Plant Biology, Ministry of Education/Key Laboratory of Potato Biology and Biotechnology, Ministry of Agriculture and Rural Affairs/College of Horticulture and Forestry Sciences, Huazhong Agricultural University , Wuhan, Hubei , China
AuthorAffiliation_xml – name: 3 College of Biology and Agricultural Resources, Huanggang Normal University/Hubei Key Laboratory of Economic Forest Germplasm Improvement and Resources Comprehensive Utilization , Huanggang, Hubei , China
– name: 1 Key Laboratory of Horticultural Plant Biology, Ministry of Education/Key Laboratory of Potato Biology and Biotechnology, Ministry of Agriculture and Rural Affairs/College of Horticulture and Forestry Sciences, Huazhong Agricultural University , Wuhan, Hubei , China
– name: 2 Forestry and Fruit Research Institute, Wuhan Academy of Agricultural Sciences , Wuhan, Hubei , China
Author_xml – sequence: 1
  givenname: Wei
  surname: Huang
  fullname: Huang, Wei
– sequence: 2
  givenname: Jianke
  surname: Dong
  fullname: Dong, Jianke
– sequence: 3
  givenname: Xijuan
  surname: Zhao
  fullname: Zhao, Xijuan
– sequence: 4
  givenname: Zhiyuan
  surname: Zhao
  fullname: Zhao, Zhiyuan
– sequence: 5
  givenname: Chunyan
  surname: Li
  fullname: Li, Chunyan
– sequence: 6
  givenname: Jingcai
  surname: Li
  fullname: Li, Jingcai
– sequence: 7
  givenname: Botao
  surname: Song
  fullname: Song, Botao
BookMark eNpVkU1r3DAQhkVJoWmSH9Cbj73sVt-2eyiE0LSBhRBIoTcxkkaJgtZyJTuw_z7e7hKSubzzxTMw72dyMuQBCfnC6FqIrv8WxlTXnHK-ZlRq3rUfyCnTWq6W4u_Jm_wTuaj1iS6hKO379pR8v7vfNDBA2tVYmxyaabZYmvoIIzZxaKDxcUw5-mbME0x5kXFOMMU8nJOPAVLFi6OekT_XP--vfq82t79uri43Kycln1bMOxcUMrBIW_DCcyt7jZKrTgeNAq1mVjsFXnVBamUBW8cECNVJ0SsrzsjNgeszPJmxxC2UnckQzf9GLg8GyhRdQgO818JKB-i0DI53njvBEawKLNCWLqwfB9Y42y16h8NUIL2Dvp8M8dE85GfT604tv14AX4-Akv_NWCezjdVhSjBgnqvhraQ91bJtl1V2WHUl11owvJ5h1Ox9M3vfzN43c_RNvAAx0Y9f
CitedBy_id crossref_primary_10_3389_fpls_2023_1257707
crossref_primary_10_1007_s00122_024_04651_8
crossref_primary_10_1016_j_hpj_2024_03_006
crossref_primary_10_3389_fpls_2024_1330559
Cites_doi 10.1007/s00122-018-3078-6
10.1093/genetics/137.1.303
10.1111/tpj.13857
10.1111/j.1439-0523.2008.01420.x
10.3390/ijms23031470
10.1007/s12230-016-9545-1
10.1007/s10681-007-9565-5
10.1093/bioinformatics/btp324
10.1137/1110024
10.1073/pnas.81.24.8014
10.1094/PHYTO-05-16-0204-R
10.1038/ng.806
10.1201/b10881-7
10.3389/fpls.2018.00315
10.1007/s11540-011-9196-z
10.1002/j.1537-2197.1962.tb15023.x
10.1038/nature10158
10.1007/BF00035742
10.1111/tpj.12105
10.3389/fpls.2018.00944
10.1186/s12863-015-0213-0
10.1007/s00122-005-1927-6
10.1007/s00122-015-2509-x
10.1093/bioinformatics/btp352
10.1093/nar/gks540
10.1007/s00122-016-2673-7
10.1007/978-3-030-39157-7_15
10.1094/PDIS-02-21-0233-SC
10.1007/s00122-019-03521-y
10.1007/s00122-014-2369-9
10.2135/cropsci2007.04.0191
10.1007/bf02849314
10.1007/s11032-018-0913-z
10.1007/s13353-018-0433-x
10.1186/s12284-018-0218-1
10.3389/fpls.2022.952263
10.1007/s00122-014-2313-z
10.1007/s00438-014-0832-6
10.3835/plantgenome2018.01.0006
10.1038/s41467-018-07216-8
10.1101/gr.107524.110
10.1007/s12230-009-9097-8
10.3198/jpr2013.05.0024crg
ContentType Journal Article
Copyright Copyright © 2022 Huang, Dong, Zhao, Zhao, Li, Li and Song 2022 Huang, Dong, Zhao, Zhao, Li, Li and Song
Copyright_xml – notice: Copyright © 2022 Huang, Dong, Zhao, Zhao, Li, Li and Song 2022 Huang, Dong, Zhao, Zhao, Li, Li and Song
DBID AAYXX
CITATION
7X8
5PM
DOA
DOI 10.3389/fpls.2022.1046287
DatabaseName CrossRef
MEDLINE - Academic
PubMed Central (Full Participant titles)
DOAJ Directory of Open Access Journals
DatabaseTitle CrossRef
MEDLINE - Academic
DatabaseTitleList CrossRef
Database_xml – sequence: 1
  dbid: DOA
  name: Directory of Open Access Journals
  url: https://www.doaj.org/
  sourceTypes: Open Website
DeliveryMethod fulltext_linktorsrc
Discipline Botany
EISSN 1664-462X
EndPage 1046287
ExternalDocumentID oai_doaj_org_article_a2963b4caec64fc28d2c32eab5f1f070
10_3389_fpls_2022_1046287
GroupedDBID 5VS
9T4
AAFWJ
AAKDD
AAYXX
ACGFO
ACGFS
ACXDI
ADBBV
ADRAZ
AENEX
AFPKN
ALMA_UNASSIGNED_HOLDINGS
AOIJS
BCNDV
CITATION
EBD
ECGQY
GROUPED_DOAJ
GX1
HYE
IAO
IEA
IGS
ISR
KQ8
M48
M~E
OK1
PGMZT
RNS
RPM
7X8
ITC
5PM
ID FETCH-LOGICAL-c442t-1dccf5e1abe07ad3d2b496e42586f6e3eb61b6c5ad58f465bae7c13a3584395b3
IEDL.DBID RPM
ISSN 1664-462X
IngestDate Fri Oct 04 13:12:06 EDT 2024
Tue Sep 17 21:31:45 EDT 2024
Sat Aug 17 03:08:02 EDT 2024
Thu Sep 26 17:01:48 EDT 2024
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Language English
License This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c442t-1dccf5e1abe07ad3d2b496e42586f6e3eb61b6c5ad58f465bae7c13a3584395b3
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
Reviewed by: Hengyou Zhang, Northeast Institute of Geography and Agroecology (CAS), China; Fa Cui, Ludong University, China
This article was submitted to Crop and Product Physiology, a section of the journal Frontiers in Plant Science
Edited by: Pietro Gramazio, University of Tsukuba, Japan
OpenAccessLink https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9685338/
PQID 2740906477
PQPubID 23479
PageCount 1
ParticipantIDs doaj_primary_oai_doaj_org_article_a2963b4caec64fc28d2c32eab5f1f070
pubmedcentral_primary_oai_pubmedcentral_nih_gov_9685338
proquest_miscellaneous_2740906477
crossref_primary_10_3389_fpls_2022_1046287
PublicationCentury 2000
PublicationDate 2022-11-10
PublicationDateYYYYMMDD 2022-11-10
PublicationDate_xml – month: 11
  year: 2022
  text: 2022-11-10
  day: 10
PublicationDecade 2020
PublicationTitle Frontiers in plant science
PublicationYear 2022
Publisher Frontiers Media S.A
Publisher_xml – name: Frontiers Media S.A
References Ortiz (B27) 1994
Sun (B36) 2018; 11
Illa-Berenguer (B12) 2015; 128
Mansfeld (B23) 2018; 11
Saghai-Maroof (B32) 1985; 81
Xu (B47) 2008; 48
Li (B17) 2009; 25
Takagi (B37) 2013; 74
Si (B33) 2016; 94
Xu (B48) 2011; 475
Jansky (B13) 2014; 8
Pandey (B28) 1962; 49
Chen (B3) 2019; 39
Endelman (B7) 2016; 129
ŚLiwka (B34) 2008; 127
Van Ooijen (B41) 2009
Lohse (B20) 2012; 40
Stark (B35) 2020
Visser (B42) 2009; 86
Leisner (B14) 2018; 94
Nadaraya (B25) 1964; 10
Zhou (B49) 2014; 289
Manrique-Carpintero (B22) 2018; 9
Bryan (B1) 2011
Pandey (B29) 2022; 13
Torrance (B38) 2020; 133
Li (B15) 2005; 110
Hara-Skrzypiec (B10) 2018; 59
Huang (B11) 2021; 105
Prashar (B30) 2014; 127
Lu (B21) 2014; 127
Van Eck (B39) 1994; 137
Vreugdenhil (B43) 2011
D’hoop (B6) 2008; 161
Lindhout (B18) 2011; 54
(B9) 2020
Pushkarnath (B31) 1953; 2
Fan (B8) 2022; 23
Xiao (B46) 2018; 9
McKenna (B24) 2010; 20
Watson (B44) 1964; 26
Lindqvist-Kreuze (B19) 2015; 16
Van Ooijen (B40) 2006
Li (B16) 2009; 25
Wu (B45) 2018; 9
De Jong (B4) 1993; 70
Nie (B26) 2016; 106
DePristo (B5) 2011; 43
Chen (B2) 2018; 131
References_xml – volume: 131
  start-page: 1287
  year: 2018
  ident: B2
  article-title: Identification and rapid mapping of a gene conferring broad-spectrum late blight resistance in the diploid potato species Solanum verrucosum through DNA capture technologies
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-018-3078-6
  contributor:
    fullname: Chen
– volume: 137
  start-page: 303
  year: 1994
  ident: B39
  article-title: Multiple alleles for tuber shape in diploid potato detected by qualitative and quantitative genetic analysis using RFLPs
  publication-title: Genetics
  doi: 10.1093/genetics/137.1.303
  contributor:
    fullname: Van Eck
– volume: 94
  start-page: 562
  year: 2018
  ident: B14
  article-title: Genome sequence of M6, a diploid inbred clone of the high-glycoalkaloid-producing tuber-bearing potato species solanum chacoense, reveals residual heterozygosity
  publication-title: Plant J.
  doi: 10.1111/tpj.13857
  contributor:
    fullname: Leisner
– volume: 127
  start-page: 49
  year: 2008
  ident: B34
  article-title: Tagging quantitative trait loci for dormancy, tuber shape, regularity of tuber shape, eye depth and flesh colour in diploid potato originated from six Solanum species
  publication-title: Plant Breed.
  doi: 10.1111/j.1439-0523.2008.01420.x
  contributor:
    fullname: ŚLiwka
– volume: 26
  start-page: 359
  year: 1964
  ident: B44
  article-title: Smooth regression analysis
  publication-title: Sankhy=a: Indian J. Statistics Ser. A
  contributor:
    fullname: Watson
– volume: 23
  year: 2022
  ident: B8
  article-title: Fine mapping and candidate gene prediction of tuber shape controlling Ro locus based on integrating genetic and transcriptomic analyses in potato
  publication-title: Int. J. Mol. Sci.
  doi: 10.3390/ijms23031470
  contributor:
    fullname: Fan
– volume: 94
  start-page: 88
  year: 2016
  ident: B33
  article-title: Potato tuber length-width ratio assessment using image analysis
  publication-title: Am. J. Potato Res.
  doi: 10.1007/s12230-016-9545-1
  contributor:
    fullname: Si
– start-page: 263
  volume-title: Potato genetics
  year: 1994
  ident: B27
  article-title: Inheritance of morphological and tuber characteristics
  contributor:
    fullname: Ortiz
– volume: 161
  start-page: 47
  year: 2008
  ident: B6
  article-title: Association mapping of quality traits in potato (Solanum tuberosum l.)
  publication-title: Euphytica
  doi: 10.1007/s10681-007-9565-5
  contributor:
    fullname: D’hoop
– volume: 25
  start-page: 1754
  year: 2009
  ident: B16
  article-title: Fast and accurate short read alignment with burrows-wheeler transform
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp324
  contributor:
    fullname: Li
– volume: 10
  start-page: 186
  year: 1964
  ident: B25
  article-title: On estimating regression
  publication-title: Theory. Probab. Appl.
  doi: 10.1137/1110024
  contributor:
    fullname: Nadaraya
– volume: 81
  year: 1985
  ident: B32
  article-title: Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population dynamics
  publication-title: Proc Natl Acad Sci U.S.A.
  doi: 10.1073/pnas.81.24.8014
  contributor:
    fullname: Saghai-Maroof
– volume: 106
  start-page: 1366
  year: 2016
  ident: B26
  article-title: Development and validation of high-resolution melting markers derived from Rysto STS markers for high-throughput marker-assisted selection of potato carrying Rysto
  publication-title: Phytopathology
  doi: 10.1094/PHYTO-05-16-0204-R
  contributor:
    fullname: Nie
– volume: 43
  start-page: 491
  year: 2011
  ident: B5
  article-title: A framework for variation discovery and genotyping using next-generation DNA sequencing data
  publication-title: Nat. Genet.
  doi: 10.1038/ng.806
  contributor:
    fullname: DePristo
– start-page: 113
  volume-title: The genetics, genomics, and breeding of potato
  year: 2011
  ident: B1
  article-title: Mapping complex potato traits
  doi: 10.1201/b10881-7
  contributor:
    fullname: Bryan
– volume: 9
  year: 2018
  ident: B46
  article-title: Genetic loci conferring reducing sugar accumulation and conversion of cold-stored potato tubers revealed by QTL analysis in a diploid population
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2018.00315
  contributor:
    fullname: Xiao
– volume: 54
  start-page: 301
  year: 2011
  ident: B18
  article-title: Towards F1 hybrid seed potato breeding
  publication-title: Potato Res.
  doi: 10.1007/s11540-011-9196-z
  contributor:
    fullname: Lindhout
– volume: 49
  start-page: 874
  year: 1962
  ident: B28
  article-title: Interspecific incompatibility in Solanum species
  publication-title: Am. J. Bot.
  doi: 10.1002/j.1537-2197.1962.tb15023.x
  contributor:
    fullname: Pandey
– volume: 475
  start-page: 189
  year: 2011
  ident: B48
  article-title: Genome sequence and analysis of the tuber crop potato
  publication-title: Nature
  doi: 10.1038/nature10158
  contributor:
    fullname: Xu
– volume: 2
  start-page: 49
  year: 1953
  ident: B31
  article-title: Studies on sterility in potato
  publication-title: Euphytica
  doi: 10.1007/BF00035742
  contributor:
    fullname: Pushkarnath
– volume-title: MapQTL6, software for the mapping of quantitative trait in experiment populations of diploid species
  year: 2009
  ident: B41
  contributor:
    fullname: Van Ooijen
– volume: 74
  start-page: 174
  year: 2013
  ident: B37
  article-title: QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations
  publication-title: Plant J.
  doi: 10.1111/tpj.12105
  contributor:
    fullname: Takagi
– volume: 9
  year: 2018
  ident: B22
  article-title: Genome reduction in tetraploid potato reveals genetic load, haplotype variation, and loci associated with agronomic traits
  publication-title: Front. Plant Sci.
  doi: 10.3389/fpls.2018.00944
  contributor:
    fullname: Manrique-Carpintero
– volume: 16
  start-page: 57
  year: 2015
  ident: B19
  article-title: Tuber shape and eye depth variation in a diploid family of Andean potatoes
  publication-title: BMC Genet.
  doi: 10.1186/s12863-015-0213-0
  contributor:
    fullname: Lindqvist-Kreuze
– volume: 110
  start-page: 1068
  year: 2005
  ident: B15
  article-title: Inheritance and genetic mapping of tuber eye depth in cultivated diploid potatoes
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-005-1927-6
  contributor:
    fullname: Li
– volume: 128
  start-page: 1329
  year: 2015
  ident: B12
  article-title: Rapid and reliable identification of tomato fruit weight and locule number loci by QTL-seq
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-015-2509-x
  contributor:
    fullname: Illa-Berenguer
– volume: 25
  start-page: 2078
  year: 2009
  ident: B17
  article-title: The sequence alignment/map format and samtools
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btp352
  contributor:
    fullname: Li
– volume: 40
  start-page: W622
  year: 2012
  ident: B20
  article-title: RobiNA: a user-friendly, integrated software solution for RNA-seq-based transcriptomics
  publication-title: Nucleic. Acids Res.
  doi: 10.1093/nar/gks540
  contributor:
    fullname: Lohse
– volume: 129
  start-page: 935
  year: 2016
  ident: B7
  article-title: Genetic mapping with an inbred line-derived F2 population in potato
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-016-2673-7
  contributor:
    fullname: Endelman
– start-page: 479
  volume-title: Potato production systems
  year: 2020
  ident: B35
  article-title: Tuber quality
  doi: 10.1007/978-3-030-39157-7_15
  contributor:
    fullname: Stark
– volume: 105
  start-page: 3344
  year: 2021
  ident: B11
  article-title: Extreme resistance to potato virus a in potato cultivar Barbara is independently mediated by Ra and Rysto
  publication-title: Plant Dis.
  doi: 10.1094/PDIS-02-21-0233-SC
  contributor:
    fullname: Huang
– volume-title: Potato biology and biotechnology: advances and perspectives
  year: 2011
  ident: B43
  contributor:
    fullname: Vreugdenhil
– volume: 133
  start-page: 967
  year: 2020
  ident: B38
  article-title: Natural resistance to potato virus y in Solanum tuberosum group phureja
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-019-03521-y
  contributor:
    fullname: Torrance
– volume: 127
  start-page: 2159
  year: 2014
  ident: B30
  article-title: Construction of a dense SNP map of a highly heterozygous diploid potato population and QTL analysis of tuber shape and eye depth
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-014-2369-9
  contributor:
    fullname: Prashar
– year: 2020
  ident: B9
– volume: 48
  start-page: 391
  year: 2008
  ident: B47
  article-title: Marker-assisted selection in plant breeding: From publications to practice
  publication-title: Crop Sci.
  doi: 10.2135/cropsci2007.04.0191
  contributor:
    fullname: Xu
– volume: 70
  start-page: 267
  year: 1993
  ident: B4
  article-title: Inheritance of tuber shape in cultivated diploid potatoes
  publication-title: Am. Potato J.
  doi: 10.1007/bf02849314
  contributor:
    fullname: De Jong
– volume: 39
  start-page: 6
  year: 2019
  ident: B3
  article-title: Molecular marker development and primary physical map construction for the tuber shape Ro gene locus in diploid potato (Solanum tuberosum l.)
  publication-title: Mol. Breed.
  doi: 10.1007/s11032-018-0913-z
  contributor:
    fullname: Chen
– volume: 59
  start-page: 123
  year: 2018
  ident: B10
  article-title: QTL for tuber morphology traits in diploid potato
  publication-title: J. Appl. Genet.
  doi: 10.1007/s13353-018-0433-x
  contributor:
    fullname: Hara-Skrzypiec
– volume: 11
  start-page: 24
  year: 2018
  ident: B36
  article-title: Identification of a cold-tolerant locus in rice (Oryza sativa l.) using bulked segregant analysis with a next-generation sequencing strategy
  publication-title: Rice (N Y)
  doi: 10.1186/s12284-018-0218-1
  contributor:
    fullname: Sun
– volume: 13
  year: 2022
  ident: B29
  article-title: Genomic regions associated with tuber traits in tetraploid potatoes and identification of superior clones for breeding purposes
  publication-title: Front. Plant Sci
  doi: 10.3389/fpls.2022.952263
  contributor:
    fullname: Pandey
– volume: 127
  start-page: 1491
  year: 2014
  ident: B21
  article-title: QTL-seq identifies an early flowering QTL located near Flowering locus t in cucumber
  publication-title: Theor. Appl. Genet.
  doi: 10.1007/s00122-014-2313-z
  contributor:
    fullname: Lu
– volume: 289
  start-page: 575
  year: 2014
  ident: B49
  article-title: A major QTL located on chromosome V associates with in vitro tuberization in a tetraploid potato population
  publication-title: Mol. Genet. Genomics
  doi: 10.1007/s00438-014-0832-6
  contributor:
    fullname: Zhou
– volume: 11
  year: 2018
  ident: B23
  article-title: QTLseqr: An r package for bulk segregant analysis with next-generation sequencing
  publication-title: Plant Genome
  doi: 10.3835/plantgenome2018.01.0006
  contributor:
    fullname: Mansfeld
– volume: 9
  start-page: 4734
  year: 2018
  ident: B45
  article-title: A common genetic mechanism underlies morphological diversity in fruits and other plant organs
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-018-07216-8
  contributor:
    fullname: Wu
– volume-title: JoinMap 4, software for the calculation of genetic linkage maps in experimental populations
  year: 2006
  ident: B40
  contributor:
    fullname: Van Ooijen
– volume: 20
  start-page: 1297
  year: 2010
  ident: B24
  article-title: The genome analysis toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
  publication-title: Genome Res.
  doi: 10.1101/gr.107524.110
  contributor:
    fullname: McKenna
– volume: 86
  start-page: 417
  year: 2009
  ident: B42
  article-title: Sequencing the potato genome: Outline and first results to come from the elucidation of the sequence of the world’s third most important food crop
  publication-title: Am. J. Potato Res.
  doi: 10.1007/s12230-009-9097-8
  contributor:
    fullname: Visser
– volume: 8
  year: 2014
  ident: B13
  article-title: M6: A diploid potato inbred line for use in breeding and genetics research
  publication-title: J. Plant Regist.
  doi: 10.3198/jpr2013.05.0024crg
  contributor:
    fullname: Jansky
SSID ssj0000500997
Score 2.390103
Snippet Tuber shape is one of the most important traits for potato breeding. Since poor or irregular shape increases the difficulty of handling and processing,...
SourceID doaj
pubmedcentral
proquest
crossref
SourceType Open Website
Open Access Repository
Aggregation Database
StartPage 1046287
SubjectTerms marker development
Plant Science
potato
QTL-seq
self-pollinated
tuber shape
SummonAdditionalLinks – databaseName: DOAJ Directory of Open Access Journals
  dbid: DOA
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV1LS8NAEF5EPHgRn1hfrOBJCHafabxZUYqoILTgLezsgxYkCZoe_PfOJqk0Jy-eAnmwm28m2W-Y2W8IuZIeMORyLBkF6RKpgkiAASTODlMTmA_SxL3DL696MpNP7-p9rdVXrAlr5YFb4G4MRxcBaY23WgbLR45bwb0BFVhAf23-vkytBVOtqnekPmmbxsQoLLsJ1UdU5-a8yWryWEK3thA1ev09ktkvkVxbcx53yU5HFuldO8k9suGLfbI1LpHQfR-Q27fpMzWdqAgtA62X4D_p19xUni4KaqhbVB_lwtEKn6hLPKyadR2S2ePD9H6SdK0QEislrxPmrA3KMwMeMXTCcZCZ9vjBjXTQXnjQDLRVxikEXSswPrVMGIH8QmQKxBHZLMrCHxOaDR1zAeOEzEFUWwOhmNCGW5uCSbMwINcrXPKqVbzIMVKIIOYRxDyCmHcgDsg4Ivd7YxSrbk6gCfPOhPlfJhyQyxXuOTp3zFiYwpdLHCrF8DNuh8WB0p5BeiP2rxSLeSOTnWmkImJ08h9TPCXb8bWTpv7vjGzWn0t_jmykhovG8X4AIHfhBw
  priority: 102
  providerName: Directory of Open Access Journals
– databaseName: Scholars Portal Open Access Journals
  dbid: M48
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV1bS-QwGA2u-rAv4pUdVyXCPi3ENddOF0RUFJF1QXBg3kq-XHRgaOvYgfXf75dOR7bgyz6VtmlDTm7nkOR8hHxTAVByec6GUXmmdJQMOADz7jSzkYeobDo7fP_b3I7U3ViPV8gyvFUH4OuH0i7FkxrNpid_Xt7OscOfJcWJ8-2PWE-T8bYQ7YIlSoBPZE0oqVKDv-_Y_sLqO_GhNtyKMYph0vFinfPjv_RmqtbQv8dC-3so_5mUbjbJRscm6cWi-rfISii3yfplhYzvbYf8fHj8RW3nOkKrSJs5hBl9fbZ1oJOSWuon9bSaeFrjF02Fl2U0r10yurl-vLplXawE5pQSDePeuagDtxAQZC-9AJWbgD1yaKIJMoDhYJy2XmOtGA02ZI5LK5GAyFyD3COrZVWGL4Tmp577iEIi95Ds2EBqLo0VzmVgszwOyPclLkW9sMQoUEokEIsEYpFALDoQB-QyIfeeMLlZtw-q2VPRdY7CChwGQDkbnFHRiaEXTopgQUcecUwakOMl7gW2_rSkYctQzTGrDPVpOi-LGWW9Cunl2H9TTp5bH-3cIFeRw_3_Kc9X8jndsnYj4AFZbWbzcIi0pIGjtrH9BaA34To
  priority: 102
  providerName: Scholars Portal
Title QTL analysis of tuber shape in a diploid potato population
URI https://search.proquest.com/docview/2740906477
https://pubmed.ncbi.nlm.nih.gov/PMC9685338
https://doaj.org/article/a2963b4caec64fc28d2c32eab5f1f070
Volume 13
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1La9wwEBZJ6KGX0rQJ3bYJKuRUcDZ62u4tCU1DyZYWEtib0ejRGDa22XoP_fcdae2wvvYigy0x9qeRZwbNfCLkTHrAkMuxrAjSZVIFkQEDyJy9yE1gPkgTa4cXP_Ttg_y-VMs9osZamJS0b6E-b1ZP5039mHIruyc7H_PE5j8X16VGIyOK-T7Zz4XYCdG3hN7R68m3O5jYq5yHbhWJuTlPG5o8Zs_t2KBE1T_xL6fZkTvm5uY1eTX4ifRy-z6HZM83b8iLqxZ9ub9vyZdf93fUDHwitA2034Bf0z-PpvO0bqihru5Wbe1ohyP6Fi_jOV1H5OHm6_31bTacgpBZKXmfMWdtUJ4Z8AifE46DLLXHtVbooL3woBloq4xTiLdWYHxumTACXQtRKhDH5KBpG_-O0PLCMRcwRCgdRKI1EIoJbbi1OZi8DDPyecSl6rZkFxUGCRHEKoJYRRCrAcQZuYrIPXeMPNXpRrv-XQ2zVRmOCxykNd5qGSwvHLeCewMqsIB_mxn5NOJeoV7HzQrT-HaDonKMPGMlLArKJxMykTh9ggqTGLIHBXn_3yM_kJfxW7OU7_eRHPTrjT9B76OH0xS1Y_ttybBdyOI06d8_ue_hhg
link.rule.ids 230,315,733,786,790,870,891,2115,24346,27955,27956,53825,53827
linkProvider National Library of Medicine
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lj9MwELaWBQkuvBHlaSROSGnXzzTc2BWrAu0KpC7aW-Txg43oJlFJD_DrGeeBGm5wihTbcuwvY89oPn8m5LX0gCGXY8k8SJdIFUQCDCBx9ig1gfkgTTw7vDrTi3P58UJdHBA1nIVpSfsWimm5uZqWxWXLrayv7Gzgic0-r04yjZuMmM-uketor1ztBemdpHf0e9Iuh4n1slmoN1Gam_M2pckjf25vF2rF-kce5pgfubfhnN4hX4dP7Xgm36e7Bqb2118qjv88lrvkdu-C0ndd8T1y4Mv75MZxhW7izwfk7Zf1kppeqoRWgTY78Fv649LUnhYlNdQV9aYqHK2xRVPhY7gC7CE5P32_Plkk_QULiZWSNwlz1gblmQGPyDjhOMhMezTjuQ7aCw-agbbKOIVQagXGp5YJI9BrEZkC8YgcllXpHxOaHTnmAkYfmYOo4QZCMaENtzYFk2ZhQt4ME57XnY5GjvFHRCeP6OQRnbxHZ0KOIyR_KkYJ7PZFtf2W95OXG45rB0hrvNUyWD533AruDajAAi5kE_JqADRHk4l5EFP6aoddpRjUxkO22FE6QnrU47gE8WvFt3u8nvx3y5fk5mK9WubLD2efnpJbcdxJSyt8Rg6b7c4_RyengRftL_0bZzwA1Q
linkToPdf http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lb9QwELagIMSFd8XyNBInpGzqR5wNN1pYFWirIrVSxcXy-EEjtkm0ZA_w6xnngTYce4qUjOXYn-2ZkT9_JuSt9IApl2PJIkiXyCyIBBhA4uxebgLzQZp4dvj4RB2eyy8X2cXWVV8dad9COa9WV_OqvOy4lc2VTUeeWHp6fFAodDJikTYupDfJLZyzPN9K1HtZ7xj75P0-JtoWaWhWUZ6b825bk0cO3ZYn6gT7J1HmlCO55XSW98n38Xd7rsnP-aaFuf3zn5LjtdrzgNwbQlH6oTd5SG746hG5vV9juPj7MXn_7eyImkGyhNaBthvwa_rr0jSelhU11JXNqi4dbbBEW-NjvArsCTlffjo7OEyGixYSKyVvE-asDZlnBjwi5ITjIAvlcTovVFBeeFAMlM2MyxBSlYHxuWXCCIxeRJGB2CU7VV35p4QWe465gFlI4SBquYHImFCGW5uDyYswI-_GTtdNr6ehMQ-JCOmIkI4I6QGhGdmPsPwzjFLY3Yt6_UMPHagNxzUEpDXeKhksXzhuBfcGssACLmgz8mYEVePUifshpvL1BqvKMbmNh22xonyC9qTG6RfEsBPhHjB7du2Sr8md049LffT55Otzcjc2O-nYhS_ITrve-JcY67TwqhvVfwFn8wNV
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=QTL+analysis+of+tuber+shape+in+a+diploid+potato+population&rft.jtitle=Frontiers+in+plant+science&rft.au=Huang%2C+Wei&rft.au=Dong%2C+Jianke&rft.au=Zhao%2C+Xijuan&rft.au=Zhao%2C+Zhiyuan&rft.date=2022-11-10&rft.issn=1664-462X&rft.eissn=1664-462X&rft.volume=13&rft_id=info:doi/10.3389%2Ffpls.2022.1046287&rft.externalDBID=n%2Fa&rft.externalDocID=10_3389_fpls_2022_1046287
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=1664-462X&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=1664-462X&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=1664-462X&client=summon