Functional and ecological impacts of horizontal gene transfer in eukaryotes

Horizontal gene transfer (HGT) is known to have contributed to the content of eukaryotic genomes, but the direct effects of HGT on eukaryotic evolution are more obscure because many of the best supported cases involve a new gene replacing a functionally similar homologue. Here, several cases of HGT...

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Published inCurrent opinion in genetics & development Vol. 19; no. 6; pp. 613 - 619
Main Author Keeling, Patrick J
Format Journal Article
LanguageEnglish
Published England Elsevier Ltd 01.12.2009
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Abstract Horizontal gene transfer (HGT) is known to have contributed to the content of eukaryotic genomes, but the direct effects of HGT on eukaryotic evolution are more obscure because many of the best supported cases involve a new gene replacing a functionally similar homologue. Here, several cases of HGT conferring a plausible adaptive advantage are reviewed to examine emerging trends in such transfer events. In particular, HGT seems to play an important role in adaptation to parasitism and pathogenesis, as well as to other specific environmental conditions such as anaerobiosis or nitrogen and iron limitation in marine environments. Most, but not all, of the functionally significant HGT to eukaryotes comes from bacteria, in part due to chance, but probably also because bacteria have greater metabolic diversity to offer.
AbstractList Horizontal gene transfer (HGT) is known to have contributed to the content of eukaryotic genomes, but the direct effects of HGT on eukaryotic evolution are more obscure because many of the best supported cases involve a new gene replacing a functionally similar homologue. Here, several cases of HGT conferring a plausible adaptive advantage are reviewed to examine emerging trends in such transfer events. In particular, HGT seems to play an important role in adaptation to parasitism and pathogenesis, as well as to other specific environmental conditions such as anaerobiosis or nitrogen and iron limitation in marine environments. Most, but not all, of the functionally significant HGT to eukaryotes comes from bacteria, in part due to chance, but probably also because bacteria have greater metabolic diversity to offer.
Author Keeling, Patrick J
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Cites_doi 10.1038/nrg2386
10.1111/j.1348-0421.1960.tb00170.x
10.1186/1471-2148-6-101
10.1038/nature03291
10.1073/pnas.0408336102
10.1016/j.cub.2004.01.032
10.1186/1471-2148-6-27
10.1046/j.1365-2958.2003.03778.x
10.1073/pnas.96.7.3801
10.1128/EC.2.5.1069-1075.2003
10.1128/EC.5.1.148-154.2006
10.1038/nature07410
10.1073/pnas.092525699
10.1186/1745-6150-1-21
10.1016/j.tig.2003.10.001
10.1186/1471-2148-8-87
10.1073/pnas.0404505101
10.1111/j.1420-9101.2008.01605.x
10.1073/pnas.0901260106
10.1016/j.cub.2006.07.052
10.1078/143446103764928468
10.1002/bies.20194
10.1371/journal.pone.0002616
10.1038/nature07539
10.1073/pnas.0711370105
10.1016/j.jmb.2004.06.032
10.1371/journal.pone.0005162
10.1038/ng1839
10.1016/j.ympev.2007.11.035
10.1007/s00239-003-2558-7
10.1038/35082627
10.1006/geno.2002.6763
10.1093/oxfordjournals.molbev.a026275
10.1016/j.tim.2005.11.004
10.1016/S0168-9525(01)02529-X
10.1093/jxb/erl148
10.1073/pnas.1230951100
10.1371/journal.pone.0001097
10.1186/1471-2148-7-89
10.1073/pnas.0304686101
10.1126/science.1156407
10.1016/j.ijpara.2003.11.025
10.1073/pnas.0501918102
10.1126/science.1112642
10.1186/1471-2164-7-22
10.1038/20601
10.1186/1471-2148-7-230
10.1006/tpbi.2002.1587
10.1126/science.1132894
10.1146/annurev.genet.42.110807.091417
10.1046/j.1365-2958.1997.3101672.x
10.1038/35057062
10.1186/1741-7007-4-31
10.1126/science.1061036
10.1128/EC.00106-06
10.1080/10425170290023392
10.1038/nature03481
10.1126/science.284.5423.2124
10.1128/JB.183.22.6714-6716.2001
10.1016/j.chembiol.2007.12.010
10.1111/j.1550-7408.2008.00349.x
10.1007/s00018-005-4539-z
10.1126/science.1143837
10.1038/383495a0
10.1186/1471-2164-8-51
10.1126/science.1167222
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References Lander, Linton, Birren, Nusbaum, Zody, Baldwin, Devon, Dewar, Doyle, FitzHugh (bib59) 2001; 409
Bergthorsson, Richardson, Young, Goertzen, Palmer (bib9) 2004; 101
Sanchez-Perez, Hampl, Simpson, Roger (bib19) 2008; 55
Slamovits, Keeling (bib35) 2006; 5
Akiba, Koyama, Ishiki, Kimura, Fukushima (bib1) 1960; 4
Bowler, Allen, Badger, Grimwood, Jabbari, Kuo, Maheswari, Martens, Maumus, Otillar (bib45) 2008; 456
Richards, Dacks, Jenkinson, Thornton, Talbot (bib23) 2006; 16
Lawrence (bib4) 2002; 61
Rogers, Watkins, Harper, Durnford, Gray, Keeling (bib20) 2007; 7
Friesen, Stukenbrock, Liu, Meinhardt, Ling, Faris, Rasmussen, Solomon, McDonald, Oliver (bib25) 2006; 38
Huang, Mullapudi, Sicheritz-Ponten, Kissinger (bib50) 2004; 34
Keeling, Palmer (bib7) 2008; 9
Doolittle (bib2) 1999; 284
Nelson, Clayton, Gill, Gwinn, Dodson, Haft, Hickey, Peterson, Nelson, Ketchum (bib30) 1999; 399
Morrison, McArthur, Gillin, Aley, Adam, Olsen, Best, Cande, Chen, Cipriano (bib33) 2007; 317
Gamieldien, Ptitsyn, Hide (bib66) 2002; 18
Lawrence, Hendrickson (bib3) 2003; 50
Inderbitzin, Harkness, Turgeon, Berbee (bib26) 2005; 102
Carlton, Hirt, Silva, Delcher, Schatz, Zhao, Wortman, Bidwell, Alsmark, Besteiro (bib32) 2007; 315
Rogers, Keeling (bib51) 2003; 58
Hacker, Blum-Oehler, Muhldorfer, Tschape (bib48) 1997; 23
Xie, Fu, Jiang, Li, Huang, Li, Hsiang, Peng (bib17) 2008; 8
Worden, Lee, Mock, Rouze, Simmons, Aerts, Allen, Cuvelier, Derelle, Everett (bib46) 2009; 324
Barbera, Ruiz-Trillo, Leigh, Hug, Roger (bib38) 2007
Parker, Mock, Armbrust (bib40) 2008; 42
Loftus, Anderson, Davies, Alsmark, Samuelson, Amedeo, Roncaglia, Berriman, Hirt, Mann (bib10) 2005; 433
Andersson (bib5) 2005; 62
Eichinger, Pachebat, Glockner, Rajandream, Sucgang, Berriman, Song, Olsen, Szafranski, Xu (bib13) 2005; 435
Gile, Faktorova, Castlejohn, Burger, Lang, Farmer, Lukes, Keeling (bib16) 2009; 4
Salzberg, White, Peterson, Eisen (bib60) 2001; 292
Alvarez, Benrey, Hossaert-McKey, Grill, McKey, Galtier (bib47) 2006; 1
Fast, Law, Williams, Keeling (bib52) 2003; 2
Allen, Puthiyaveetil, Strom, Allen (bib44) 2005; 27
Stechmann, Baumgartner, Silberman, Roger (bib36) 2006; 6
Striepen, White, Li, Guerini, Malik, Logsdon, Liu, Abrahamsen (bib54) 2002; 99
Richards, Dacks, Campbell, Blanchard, Foster, McLeod, Roberts (bib24) 2006; 5
Simpson, Perley, Lara (bib28) 2008; 47
Kinsella, McInerney (bib67) 2003; 19
de Koning, Brinkman, Jones, Keeling (bib49) 2000; 17
Roelofs, Van Haastert (bib61) 2001; 411
Ragan, Harlow, Beiko (bib62) 2006; 14
Striepen, Pruijssers, Huang, Li, Gubbels, Umejiego, Hedstrom, Kissinger (bib55) 2004; 101
Willerslev, Mourier, Hansen, Christensen, Barnes, Salzberg (bib63) 2002; 13
Boxma, Ricard, van Hoek, Severing, Moon-van der Staay, van der Staay, van Alen, de Graaf, Cremers, Kwantes (bib39) 2007; 7
Rice, Palmer (bib65) 2006; 4
Archibald, Rogers, Toop, Ishida, Keeling (bib8) 2003; 100
Muller, Lee, Gordon, Gaasterland, Sensen (bib37) 2001; 183
Allen, Laroche, Maheswari, Lommer, Schauer, Lopez, Finazzi, Fernie, Bowler (bib43) 2008; 105
Jain, Rivera, Lake (bib14) 1999; 96
Keeling, Inagaki (bib15) 2004; 101
Skaar, Seifert (bib64) 2002; 79
Coale, Johnson, Fitzwater, Gordon, Tanner, Chavez, Ferioli, Sakamoto, Rogers, Millero (bib41) 1996; 383
Marchetti, Parker, Moccia, Lin, Arrieta, Ribalet, Murphy, Maldonado, Armbrust (bib42) 2009; 457
Zhaxybayeva, Swithers, Lapierre, Fournier, Bickhart, DeBoy, Nelson, Nesbo, Doolittle, Gogarten (bib31) 2009; 106
Richards, Hirt, Williams, Embley (bib6) 2003; 154
Ricard, McEwan, Dutilh, Jouany, Macheboeuf, Mitsumori, McIntosh, Michalowski, Nagamine, Nelson (bib34) 2006; 7
Berriman, Ghedin, Hertz-Fowler, Blandin, Renauld, Bartholomeu, Lennard, Caler, Hamlin, Haas (bib12) 2005; 309
Gladyshev, Meselson, Arkhipova (bib58) 2008; 320
Hackett, Yoon, Soares, Bonaldo, Casavant, Scheetz, Nosenko, Bhattacharya (bib29) 2004; 14
Graham, Lougheed, Ewart, Davies (bib18) 2008; 3
Umejiego, Gollapalli, Sharling, Volftsun, Lu, Benjamin, Stroupe, Riera, Striepen, Hedstrom (bib56) 2008; 15
Andersson, Hirt, Foster, Roger (bib57) 2006; 6
Nedelcu, Miles, Fagir, Karol (bib27) 2008; 21
Richardson, Palmer (bib11) 2007; 58
Andersson, Sjogren, Horner, Murphy, Dyal, Svard, Logsdon, Ragan, Hirt, Roger (bib22) 2007; 8
Slamovits, Keeling (bib53) 2004; 341
Slot, Hibbett (bib21) 2007; 2
Bowler (10.1016/j.gde.2009.10.001_bib45_1) 2008; 456
Richards (10.1016/j.gde.2009.10.001_bib24) 2006; 5
Marchetti (10.1016/j.gde.2009.10.001_bib42_1) 2009; 457
Hacker (10.1016/j.gde.2009.10.001_bib48) 1997; 23
Alvarez (10.1016/j.gde.2009.10.001_bib47) 2006; 1
Richards (10.1016/j.gde.2009.10.001_bib23) 2006; 16
Carlton (10.1016/j.gde.2009.10.001_bib32) 2007; 315
Huang (10.1016/j.gde.2009.10.001_bib50) 2004; 34
Boxma (10.1016/j.gde.2009.10.001_bib39_1) 2007; 7
Allen (10.1016/j.gde.2009.10.001_bib44) 2005; 27
Barbera (10.1016/j.gde.2009.10.001_bib38) 2007
Doolittle (10.1016/j.gde.2009.10.001_bib2) 1999; 284
Rogers (10.1016/j.gde.2009.10.001_bib51) 2003; 58
Slamovits (10.1016/j.gde.2009.10.001_bib35) 2006; 5
Gladyshev (10.1016/j.gde.2009.10.001_bib58) 2008; 320
Andersson (10.1016/j.gde.2009.10.001_bib22) 2007; 8
Ricard (10.1016/j.gde.2009.10.001_bib34) 2006; 7
Striepen (10.1016/j.gde.2009.10.001_bib55) 2004; 101
Slamovits (10.1016/j.gde.2009.10.001_bib53) 2004; 341
Bergthorsson (10.1016/j.gde.2009.10.001_bib9) 2004; 101
Archibald (10.1016/j.gde.2009.10.001_bib8) 2003; 100
Rogers (10.1016/j.gde.2009.10.001_bib20_1) 2007; 7
Lawrence (10.1016/j.gde.2009.10.001_bib4) 2002; 61
Simpson (10.1016/j.gde.2009.10.001_bib28) 2008; 47
Friesen (10.1016/j.gde.2009.10.001_bib25) 2006; 38
Stechmann (10.1016/j.gde.2009.10.001_bib36) 2006; 6
Berriman (10.1016/j.gde.2009.10.001_bib12) 2005; 309
Muller (10.1016/j.gde.2009.10.001_bib37) 2001; 183
Sanchez-Perez (10.1016/j.gde.2009.10.001_bib19) 2008; 55
Striepen (10.1016/j.gde.2009.10.001_bib54) 2002; 99
Zhaxybayeva (10.1016/j.gde.2009.10.001_bib31) 2009; 106
Richardson (10.1016/j.gde.2009.10.001_bib11) 2007; 58
Gile (10.1016/j.gde.2009.10.001_bib16) 2009; 4
Andersson (10.1016/j.gde.2009.10.001_bib57) 2006; 6
Andersson (10.1016/j.gde.2009.10.001_bib5) 2005; 62
Rice (10.1016/j.gde.2009.10.001_bib65) 2006; 4
Coale (10.1016/j.gde.2009.10.001_bib41) 1996; 383
Eichinger (10.1016/j.gde.2009.10.001_bib13) 2005; 435
Willerslev (10.1016/j.gde.2009.10.001_bib63) 2002; 13
Parker (10.1016/j.gde.2009.10.001_bib40) 2008; 42
Nelson (10.1016/j.gde.2009.10.001_bib30) 1999; 399
Hackett (10.1016/j.gde.2009.10.001_bib29) 2004; 14
Akiba (10.1016/j.gde.2009.10.001_bib1) 1960; 4
Xie (10.1016/j.gde.2009.10.001_bib17) 2008; 8
Umejiego (10.1016/j.gde.2009.10.001_bib56_1) 2008; 15
Morrison (10.1016/j.gde.2009.10.001_bib33) 2007; 317
Keeling (10.1016/j.gde.2009.10.001_bib15) 2004; 101
Slot (10.1016/j.gde.2009.10.001_bib21_1) 2007; 2
Inderbitzin (10.1016/j.gde.2009.10.001_bib26) 2005; 102
Skaar (10.1016/j.gde.2009.10.001_bib64) 2002; 79
Allen (10.1016/j.gde.2009.10.001_bib43_1) 2008; 105
Keeling (10.1016/j.gde.2009.10.001_bib7_1) 2008; 9
Richards (10.1016/j.gde.2009.10.001_bib6) 2003; 154
Nedelcu (10.1016/j.gde.2009.10.001_bib27) 2008; 21
Gamieldien (10.1016/j.gde.2009.10.001_bib66) 2002; 18
Loftus (10.1016/j.gde.2009.10.001_bib10) 2005; 433
Ragan (10.1016/j.gde.2009.10.001_bib62) 2006; 14
de Koning (10.1016/j.gde.2009.10.001_bib49) 2000; 17
Worden (10.1016/j.gde.2009.10.001_bib46_1) 2009; 324
Salzberg (10.1016/j.gde.2009.10.001_bib60) 2001; 292
Kinsella (10.1016/j.gde.2009.10.001_bib67) 2003; 19
Lander (10.1016/j.gde.2009.10.001_bib59) 2001; 409
Roelofs (10.1016/j.gde.2009.10.001_bib61) 2001; 411
Fast (10.1016/j.gde.2009.10.001_bib52) 2003; 2
Jain (10.1016/j.gde.2009.10.001_bib14) 1999; 96
Graham (10.1016/j.gde.2009.10.001_bib18_1) 2008; 3
Lawrence (10.1016/j.gde.2009.10.001_bib3) 2003; 50
References_xml – volume: 99
  start-page: 6304
  year: 2002
  end-page: 6309
  ident: bib54
  article-title: Genetic complementation in apicomplexan parasites
  publication-title: Proc Natl Acad Sci U S A
  contributor:
    fullname: Abrahamsen
– volume: 79
  start-page: 625
  year: 2002
  end-page: 627
  ident: bib64
  article-title: The misidentification of bacterial genes as human cDNAs: was the human D-1 tumor antigen gene acquired from bacteria?
  publication-title: Genomics
  contributor:
    fullname: Seifert
– volume: 23
  start-page: 1089
  year: 1997
  end-page: 1097
  ident: bib48
  article-title: Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution
  publication-title: Mol Microbiol
  contributor:
    fullname: Tschape
– volume: 435
  start-page: 43
  year: 2005
  end-page: 57
  ident: bib13
  article-title: The genome of the social amoeba
  publication-title: Nature
  contributor:
    fullname: Xu
– volume: 2
  start-page: 1069
  year: 2003
  end-page: 1075
  ident: bib52
  article-title: Bacterial catalase in the microsporidian
  publication-title: Eukaryot Cell
  contributor:
    fullname: Keeling
– volume: 315
  start-page: 207
  year: 2007
  end-page: 212
  ident: bib32
  article-title: Draft genome sequence of the sexually transmitted pathogen
  publication-title: Science
  contributor:
    fullname: Besteiro
– volume: 4
  start-page: e5162
  year: 2009
  ident: bib16
  article-title: Distribution and phylogeny of EFL and EF-1alpha in Euglenozoa suggest ancestral co-occurrence followed by differential loss
  publication-title: PLoS ONE
  contributor:
    fullname: Keeling
– volume: 183
  start-page: 6714
  year: 2001
  end-page: 6716
  ident: bib37
  article-title: Presence of prokaryotic and eukaryotic species in all subgroups of the PP(i)-dependent group II phosphofructokinase protein family
  publication-title: J Bacteriol
  contributor:
    fullname: Sensen
– volume: 6
  start-page: 101
  year: 2006
  ident: bib36
  article-title: The glycolytic pathway of
  publication-title: BMC Evol Biol
  contributor:
    fullname: Roger
– volume: 15
  start-page: 70
  year: 2008
  end-page: 77
  ident: bib56
  article-title: Targeting a prokaryotic protein in a eukaryotic pathogen: identification of lead compounds against cryptosporidiosis
  publication-title: Chem Biol
  contributor:
    fullname: Hedstrom
– volume: 62
  start-page: 1182
  year: 2005
  end-page: 1197
  ident: bib5
  article-title: Lateral gene transfer in eukaryotes
  publication-title: Cell Mol Life Sci
  contributor:
    fullname: Andersson
– volume: 13
  start-page: 75
  year: 2002
  end-page: 76
  ident: bib63
  article-title: Contamination in the draft of the human genome masquerades as lateral gene transfer
  publication-title: DNA Seq
  contributor:
    fullname: Salzberg
– volume: 16
  start-page: 1857
  year: 2006
  end-page: 1864
  ident: bib23
  article-title: Evolution of filamentous plant pathogens: gene exchange across eukaryotic kingdoms
  publication-title: Curr Biol
  contributor:
    fullname: Talbot
– volume: 102
  start-page: 11390
  year: 2005
  end-page: 11395
  ident: bib26
  article-title: Lateral transfer of mating system in
  publication-title: Proc Natl Acad Sci U S A
  contributor:
    fullname: Berbee
– volume: 154
  start-page: 17
  year: 2003
  end-page: 32
  ident: bib6
  article-title: Horizontal gene transfer and the evolution of parasitic protozoa
  publication-title: Protist
  contributor:
    fullname: Embley
– volume: 17
  start-page: 1769
  year: 2000
  end-page: 1773
  ident: bib49
  article-title: Lateral gene transfer and metabolic adaptation in the human parasite
  publication-title: Mol Biol Evol
  contributor:
    fullname: Keeling
– volume: 341
  start-page: 713
  year: 2004
  end-page: 721
  ident: bib53
  article-title: Class II photolyase in a microsporidian intracellular parasite
  publication-title: J Mol Biol
  contributor:
    fullname: Keeling
– volume: 8
  start-page: 87
  year: 2008
  ident: bib17
  article-title: Intergeneric transfer of ribosomal genes between two fungi
  publication-title: BMC Evol Biol
  contributor:
    fullname: Peng
– volume: 105
  start-page: 10438
  year: 2008
  end-page: 11043
  ident: bib43
  article-title: Whole-cell response of the pennate diatom
  publication-title: Proc Natl Acad Sci U S A
  contributor:
    fullname: Bowler
– volume: 4
  start-page: 31
  year: 2006
  ident: bib65
  article-title: An exceptional horizontal gene transfer in plastids: gene replacement by a distant bacterial paralog and evidence that haptophyte and cryptophyte plastids are sisters
  publication-title: BMC Biol
  contributor:
    fullname: Palmer
– volume: 100
  start-page: 7678
  year: 2003
  end-page: 7683
  ident: bib8
  article-title: Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga
  publication-title: Proc Natl Acad Sci U S A
  contributor:
    fullname: Keeling
– volume: 292
  start-page: 1903
  year: 2001
  end-page: 1906
  ident: bib60
  article-title: Microbial genes in the human genome: lateral transfer or gene loss?
  publication-title: Science
  contributor:
    fullname: Eisen
– volume: 14
  start-page: 4
  year: 2006
  end-page: 8
  ident: bib62
  article-title: Do different surrogate methods detect lateral genetic transfer events of different relative ages?
  publication-title: Trends Microbiol
  contributor:
    fullname: Beiko
– volume: 433
  start-page: 865
  year: 2005
  end-page: 868
  ident: bib10
  article-title: The genome of the protist parasite
  publication-title: Nature
  contributor:
    fullname: Mann
– volume: 2
  start-page: e1097
  year: 2007
  ident: bib21
  article-title: Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study
  publication-title: PLoS ONE
  contributor:
    fullname: Hibbett
– volume: 50
  start-page: 739
  year: 2003
  end-page: 749
  ident: bib3
  article-title: Lateral gene transfer: when will adolescence end?
  publication-title: Mol Microbiol
  contributor:
    fullname: Hendrickson
– volume: 27
  start-page: 426
  year: 2005
  end-page: 435
  ident: bib44
  article-title: Energy transduction anchors genes in organelles
  publication-title: Bioessays
  contributor:
    fullname: Allen
– volume: 34
  start-page: 265
  year: 2004
  end-page: 274
  ident: bib50
  article-title: A first glimpse into the pattern and scale of gene transfer in Apicomplexa
  publication-title: Int J Parasitol
  contributor:
    fullname: Kissinger
– volume: 96
  start-page: 3801
  year: 1999
  end-page: 3806
  ident: bib14
  article-title: Horizontal gene transfer among genomes: the complexity hypothesis
  publication-title: Proc Natl Acad Sci U S A
  contributor:
    fullname: Lake
– volume: 101
  start-page: 17747
  year: 2004
  end-page: 17752
  ident: bib9
  article-title: Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm
  publication-title: Proc Natl Acad Sci U S A
  contributor:
    fullname: Palmer
– volume: 42
  start-page: 619
  year: 2008
  end-page: 645
  ident: bib40
  article-title: Genomic insights into marine microalgae
  publication-title: Annu Rev Genet
  contributor:
    fullname: Armbrust
– volume: 14
  start-page: 213
  year: 2004
  end-page: 218
  ident: bib29
  article-title: Migration of the plastid genome to the nucleus in a peridinin dinoflagellate
  publication-title: Curr Biol
  contributor:
    fullname: Bhattacharya
– volume: 9
  start-page: 605
  year: 2008
  end-page: 618
  ident: bib7
  article-title: Horizontal gene transfer in eukaryotic evolution
  publication-title: Nat Rev Genet
  contributor:
    fullname: Palmer
– volume: 320
  start-page: 1210
  year: 2008
  end-page: 1213
  ident: bib58
  article-title: Massive horizontal gene transfer in bdelloid rotifers
  publication-title: Science
  contributor:
    fullname: Arkhipova
– volume: 3
  start-page: e2616
  year: 2008
  ident: bib18
  article-title: Lateral transfer of a lectin-like antifreeze protein gene in fishes
  publication-title: PLoS ONE
  contributor:
    fullname: Davies
– volume: 106
  start-page: 5865
  year: 2009
  end-page: 5870
  ident: bib31
  article-title: On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales
  publication-title: Proc Natl Acad Sci U S A
  contributor:
    fullname: Gogarten
– volume: 1
  start-page: 21
  year: 2006
  ident: bib47
  article-title: Phylogeographic support for horizontal gene transfer involving sympatric bruchid species
  publication-title: Biol Direct
  contributor:
    fullname: Galtier
– volume: 61
  start-page: 449
  year: 2002
  end-page: 460
  ident: bib4
  article-title: Gene transfer in bacteria: speciation without species?
  publication-title: Theor Popul Biol
  contributor:
    fullname: Lawrence
– volume: 409
  start-page: 860
  year: 2001
  end-page: 921
  ident: bib59
  article-title: Initial sequencing and analysis of the human genome
  publication-title: Nature
  contributor:
    fullname: FitzHugh
– volume: 317
  start-page: 1921
  year: 2007
  end-page: 1926
  ident: bib33
  article-title: Genomic minimalism in the early diverging intestinal parasite
  publication-title: Science
  contributor:
    fullname: Cipriano
– volume: 6
  start-page: 27
  year: 2006
  ident: bib57
  article-title: Evolution of four gene families with patchy phylogenetic distributions: influx of genes into protist genomes
  publication-title: BMC Evol Biol
  contributor:
    fullname: Roger
– volume: 18
  start-page: 5
  year: 2002
  end-page: 8
  ident: bib66
  article-title: Eukaryotic genes in
  publication-title: Trends Genet
  contributor:
    fullname: Hide
– volume: 47
  start-page: 366
  year: 2008
  end-page: 377
  ident: bib28
  article-title: Lateral transfer of the gene for a widely used marker, alpha-tubulin, indicated by a multi-protein study of the phylogenetic position of
  publication-title: Mol Phylogenet Evol
  contributor:
    fullname: Lara
– volume: 5
  start-page: 148
  year: 2006
  end-page: 154
  ident: bib35
  article-title: Pyruvate-phosphate dikinase of oxymonads and parabasalia and the evolution of pyrophosphate-dependent glycolysis in anaerobic eukaryotes
  publication-title: Eukaryot Cell
  contributor:
    fullname: Keeling
– volume: 456
  start-page: 239
  year: 2008
  end-page: 244
  ident: bib45
  article-title: The
  publication-title: Nature
  contributor:
    fullname: Otillar
– volume: 457
  start-page: 467
  year: 2009
  end-page: 470
  ident: bib42
  article-title: Ferritin is used for iron storage in bloom-forming marine pennate diatoms
  publication-title: Nature
  contributor:
    fullname: Armbrust
– volume: 58
  start-page: 367
  year: 2003
  end-page: 375
  ident: bib51
  article-title: Lateral gene transfer and re-compartmentalisation of Calvin cycle enzymes in plants and algae
  publication-title: J Mol Evol
  contributor:
    fullname: Keeling
– start-page: 239
  year: 2007
  end-page: 268
  ident: bib38
  article-title: The diversity of mitochondrion-related organelles amongst eukaryotic microbes
  publication-title: Origins of Mitochondria and Hydrogenosomes
  contributor:
    fullname: Roger
– volume: 8
  start-page: 51
  year: 2007
  ident: bib22
  article-title: A genomic survey of the fish parasite
  publication-title: BMC Genomics
  contributor:
    fullname: Roger
– volume: 7
  start-page: 230
  year: 2007
  ident: bib39
  article-title: The [FeFe] hydrogenase of
  publication-title: BMC Evol Biol
  contributor:
    fullname: Kwantes
– volume: 7
  start-page: 89
  year: 2007
  ident: bib20
  article-title: A complex and punctate distribution of three eukaryotic genes derived by lateral gene transfer
  publication-title: BMC Evol Biol
  contributor:
    fullname: Keeling
– volume: 58
  start-page: 1
  year: 2007
  end-page: 9
  ident: bib11
  article-title: Horizontal gene transfer in plants
  publication-title: J Exp Bot
  contributor:
    fullname: Palmer
– volume: 399
  start-page: 323
  year: 1999
  end-page: 329
  ident: bib30
  article-title: Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of
  publication-title: Nature
  contributor:
    fullname: Ketchum
– volume: 411
  start-page: 1013
  year: 2001
  end-page: 1014
  ident: bib61
  article-title: Genes lost during evolution
  publication-title: Nature
  contributor:
    fullname: Van Haastert
– volume: 4
  start-page: 219
  year: 1960
  end-page: 227
  ident: bib1
  article-title: On the mechanism of the development of multiple-drug-resistant clones of
  publication-title: Jpn J Microbiol
  contributor:
    fullname: Fukushima
– volume: 55
  start-page: 374
  year: 2008
  end-page: 381
  ident: bib19
  article-title: A new divergent type of eukaryotic methionine adenosyltransferase is present in multiple distantly related secondary algal lineages
  publication-title: J Eukaryot Microbiol
  contributor:
    fullname: Roger
– volume: 309
  start-page: 416
  year: 2005
  end-page: 422
  ident: bib12
  article-title: The genome of the African trypanosome
  publication-title: Science
  contributor:
    fullname: Haas
– volume: 21
  start-page: 1852
  year: 2008
  end-page: 1860
  ident: bib27
  article-title: Adaptive eukaryote-to-eukaryote lateral gene transfer: stress-related genes of algal origin in the closest unicellular relatives of animals
  publication-title: J Evol Biol
  contributor:
    fullname: Karol
– volume: 19
  start-page: 687
  year: 2003
  end-page: 689
  ident: bib67
  article-title: Eukaryotic genes in
  publication-title: Trends Genet
  contributor:
    fullname: McInerney
– volume: 38
  start-page: 953
  year: 2006
  end-page: 956
  ident: bib25
  article-title: Emergence of a new disease as a result of interspecific virulence gene transfer
  publication-title: Nat Genet
  contributor:
    fullname: Oliver
– volume: 383
  start-page: 495
  year: 1996
  end-page: 501
  ident: bib41
  article-title: A massive phytoplankton bloom induced by an ecosystem-scale iron fertilization experiment in the equatorial Pacific Ocean
  publication-title: Nature
  contributor:
    fullname: Millero
– volume: 7
  start-page: 22
  year: 2006
  ident: bib34
  article-title: Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment
  publication-title: BMC Genomics
  contributor:
    fullname: Nelson
– volume: 5
  start-page: 1517
  year: 2006
  end-page: 1531
  ident: bib24
  article-title: Evolutionary origins of the eukaryotic shikimate pathway: gene fusions, horizontal gene transfer, and endosymbiotic replacements
  publication-title: Eukaryot Cell
  contributor:
    fullname: Roberts
– volume: 284
  start-page: 2124
  year: 1999
  end-page: 2129
  ident: bib2
  article-title: Phylogenetic classification and the universal tree
  publication-title: Science
  contributor:
    fullname: Doolittle
– volume: 324
  start-page: 268
  year: 2009
  end-page: 272
  ident: bib46
  article-title: Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes
  publication-title: Science
  contributor:
    fullname: Everett
– volume: 101
  start-page: 15380
  year: 2004
  end-page: 15385
  ident: bib15
  article-title: A class of eukaryotic GTPase with a punctate distribution suggesting multiple functional replacements of translation elongation factor 1alpha
  publication-title: Proc Natl Acad Sci U S A
  contributor:
    fullname: Inagaki
– volume: 101
  start-page: 3154
  year: 2004
  end-page: 3159
  ident: bib55
  article-title: Gene transfer in the evolution of parasite nucleotide biosynthesis
  publication-title: Proc Natl Acad Sci U S A
  contributor:
    fullname: Kissinger
– volume: 9
  start-page: 605
  year: 2008
  ident: 10.1016/j.gde.2009.10.001_bib7_1
  article-title: Horizontal gene transfer in eukaryotic evolution
  publication-title: Nat Rev Genet
  doi: 10.1038/nrg2386
  contributor:
    fullname: Keeling
– volume: 4
  start-page: 219
  year: 1960
  ident: 10.1016/j.gde.2009.10.001_bib1
  article-title: On the mechanism of the development of multiple-drug-resistant clones of Shigella
  publication-title: Jpn J Microbiol
  doi: 10.1111/j.1348-0421.1960.tb00170.x
  contributor:
    fullname: Akiba
– volume: 6
  start-page: 101
  year: 2006
  ident: 10.1016/j.gde.2009.10.001_bib36
  article-title: The glycolytic pathway of Trimastix pyriformis is an evolutionary mosaic
  publication-title: BMC Evol Biol
  doi: 10.1186/1471-2148-6-101
  contributor:
    fullname: Stechmann
– volume: 433
  start-page: 865
  year: 2005
  ident: 10.1016/j.gde.2009.10.001_bib10
  article-title: The genome of the protist parasite Entamoeba histolytica
  publication-title: Nature
  doi: 10.1038/nature03291
  contributor:
    fullname: Loftus
– volume: 101
  start-page: 17747
  year: 2004
  ident: 10.1016/j.gde.2009.10.001_bib9
  article-title: Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.0408336102
  contributor:
    fullname: Bergthorsson
– volume: 14
  start-page: 213
  year: 2004
  ident: 10.1016/j.gde.2009.10.001_bib29
  article-title: Migration of the plastid genome to the nucleus in a peridinin dinoflagellate
  publication-title: Curr Biol
  doi: 10.1016/j.cub.2004.01.032
  contributor:
    fullname: Hackett
– volume: 6
  start-page: 27
  year: 2006
  ident: 10.1016/j.gde.2009.10.001_bib57
  article-title: Evolution of four gene families with patchy phylogenetic distributions: influx of genes into protist genomes
  publication-title: BMC Evol Biol
  doi: 10.1186/1471-2148-6-27
  contributor:
    fullname: Andersson
– volume: 50
  start-page: 739
  year: 2003
  ident: 10.1016/j.gde.2009.10.001_bib3
  article-title: Lateral gene transfer: when will adolescence end?
  publication-title: Mol Microbiol
  doi: 10.1046/j.1365-2958.2003.03778.x
  contributor:
    fullname: Lawrence
– volume: 96
  start-page: 3801
  year: 1999
  ident: 10.1016/j.gde.2009.10.001_bib14
  article-title: Horizontal gene transfer among genomes: the complexity hypothesis
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.96.7.3801
  contributor:
    fullname: Jain
– volume: 2
  start-page: 1069
  year: 2003
  ident: 10.1016/j.gde.2009.10.001_bib52
  article-title: Bacterial catalase in the microsporidian Nosema locustae: implications for microsporidian metabolism and genome evolution
  publication-title: Eukaryot Cell
  doi: 10.1128/EC.2.5.1069-1075.2003
  contributor:
    fullname: Fast
– volume: 5
  start-page: 148
  year: 2006
  ident: 10.1016/j.gde.2009.10.001_bib35
  article-title: Pyruvate-phosphate dikinase of oxymonads and parabasalia and the evolution of pyrophosphate-dependent glycolysis in anaerobic eukaryotes
  publication-title: Eukaryot Cell
  doi: 10.1128/EC.5.1.148-154.2006
  contributor:
    fullname: Slamovits
– volume: 456
  start-page: 239
  year: 2008
  ident: 10.1016/j.gde.2009.10.001_bib45_1
  article-title: The Phaeodactylum genome reveals the evolutionary history of diatom genomes
  publication-title: Nature
  doi: 10.1038/nature07410
  contributor:
    fullname: Bowler
– volume: 99
  start-page: 6304
  year: 2002
  ident: 10.1016/j.gde.2009.10.001_bib54
  article-title: Genetic complementation in apicomplexan parasites
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.092525699
  contributor:
    fullname: Striepen
– volume: 1
  start-page: 21
  year: 2006
  ident: 10.1016/j.gde.2009.10.001_bib47
  article-title: Phylogeographic support for horizontal gene transfer involving sympatric bruchid species
  publication-title: Biol Direct
  doi: 10.1186/1745-6150-1-21
  contributor:
    fullname: Alvarez
– volume: 19
  start-page: 687
  year: 2003
  ident: 10.1016/j.gde.2009.10.001_bib67
  article-title: Eukaryotic genes in Mycobacterium tuberculosis? Possible alternative explanations
  publication-title: Trends Genet
  doi: 10.1016/j.tig.2003.10.001
  contributor:
    fullname: Kinsella
– volume: 8
  start-page: 87
  year: 2008
  ident: 10.1016/j.gde.2009.10.001_bib17
  article-title: Intergeneric transfer of ribosomal genes between two fungi
  publication-title: BMC Evol Biol
  doi: 10.1186/1471-2148-8-87
  contributor:
    fullname: Xie
– volume: 101
  start-page: 15380
  year: 2004
  ident: 10.1016/j.gde.2009.10.001_bib15
  article-title: A class of eukaryotic GTPase with a punctate distribution suggesting multiple functional replacements of translation elongation factor 1alpha
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.0404505101
  contributor:
    fullname: Keeling
– volume: 21
  start-page: 1852
  year: 2008
  ident: 10.1016/j.gde.2009.10.001_bib27
  article-title: Adaptive eukaryote-to-eukaryote lateral gene transfer: stress-related genes of algal origin in the closest unicellular relatives of animals
  publication-title: J Evol Biol
  doi: 10.1111/j.1420-9101.2008.01605.x
  contributor:
    fullname: Nedelcu
– volume: 106
  start-page: 5865
  year: 2009
  ident: 10.1016/j.gde.2009.10.001_bib31
  article-title: On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.0901260106
  contributor:
    fullname: Zhaxybayeva
– volume: 16
  start-page: 1857
  year: 2006
  ident: 10.1016/j.gde.2009.10.001_bib23
  article-title: Evolution of filamentous plant pathogens: gene exchange across eukaryotic kingdoms
  publication-title: Curr Biol
  doi: 10.1016/j.cub.2006.07.052
  contributor:
    fullname: Richards
– volume: 154
  start-page: 17
  year: 2003
  ident: 10.1016/j.gde.2009.10.001_bib6
  article-title: Horizontal gene transfer and the evolution of parasitic protozoa
  publication-title: Protist
  doi: 10.1078/143446103764928468
  contributor:
    fullname: Richards
– volume: 27
  start-page: 426
  year: 2005
  ident: 10.1016/j.gde.2009.10.001_bib44
  article-title: Energy transduction anchors genes in organelles
  publication-title: Bioessays
  doi: 10.1002/bies.20194
  contributor:
    fullname: Allen
– volume: 3
  start-page: e2616
  year: 2008
  ident: 10.1016/j.gde.2009.10.001_bib18_1
  article-title: Lateral transfer of a lectin-like antifreeze protein gene in fishes
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0002616
  contributor:
    fullname: Graham
– volume: 457
  start-page: 467
  year: 2009
  ident: 10.1016/j.gde.2009.10.001_bib42_1
  article-title: Ferritin is used for iron storage in bloom-forming marine pennate diatoms
  publication-title: Nature
  doi: 10.1038/nature07539
  contributor:
    fullname: Marchetti
– volume: 105
  start-page: 10438
  year: 2008
  ident: 10.1016/j.gde.2009.10.001_bib43_1
  article-title: Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.0711370105
  contributor:
    fullname: Allen
– volume: 341
  start-page: 713
  year: 2004
  ident: 10.1016/j.gde.2009.10.001_bib53
  article-title: Class II photolyase in a microsporidian intracellular parasite
  publication-title: J Mol Biol
  doi: 10.1016/j.jmb.2004.06.032
  contributor:
    fullname: Slamovits
– volume: 4
  start-page: e5162
  year: 2009
  ident: 10.1016/j.gde.2009.10.001_bib16
  article-title: Distribution and phylogeny of EFL and EF-1alpha in Euglenozoa suggest ancestral co-occurrence followed by differential loss
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0005162
  contributor:
    fullname: Gile
– volume: 38
  start-page: 953
  year: 2006
  ident: 10.1016/j.gde.2009.10.001_bib25
  article-title: Emergence of a new disease as a result of interspecific virulence gene transfer
  publication-title: Nat Genet
  doi: 10.1038/ng1839
  contributor:
    fullname: Friesen
– volume: 47
  start-page: 366
  year: 2008
  ident: 10.1016/j.gde.2009.10.001_bib28
  article-title: Lateral transfer of the gene for a widely used marker, alpha-tubulin, indicated by a multi-protein study of the phylogenetic position of Andalucia (Excavata)
  publication-title: Mol Phylogenet Evol
  doi: 10.1016/j.ympev.2007.11.035
  contributor:
    fullname: Simpson
– volume: 58
  start-page: 367
  year: 2003
  ident: 10.1016/j.gde.2009.10.001_bib51
  article-title: Lateral gene transfer and re-compartmentalisation of Calvin cycle enzymes in plants and algae
  publication-title: J Mol Evol
  doi: 10.1007/s00239-003-2558-7
  contributor:
    fullname: Rogers
– volume: 411
  start-page: 1013
  year: 2001
  ident: 10.1016/j.gde.2009.10.001_bib61
  article-title: Genes lost during evolution
  publication-title: Nature
  doi: 10.1038/35082627
  contributor:
    fullname: Roelofs
– volume: 79
  start-page: 625
  year: 2002
  ident: 10.1016/j.gde.2009.10.001_bib64
  article-title: The misidentification of bacterial genes as human cDNAs: was the human D-1 tumor antigen gene acquired from bacteria?
  publication-title: Genomics
  doi: 10.1006/geno.2002.6763
  contributor:
    fullname: Skaar
– volume: 17
  start-page: 1769
  year: 2000
  ident: 10.1016/j.gde.2009.10.001_bib49
  article-title: Lateral gene transfer and metabolic adaptation in the human parasite Trichomonas vaginalis
  publication-title: Mol Biol Evol
  doi: 10.1093/oxfordjournals.molbev.a026275
  contributor:
    fullname: de Koning
– volume: 14
  start-page: 4
  year: 2006
  ident: 10.1016/j.gde.2009.10.001_bib62
  article-title: Do different surrogate methods detect lateral genetic transfer events of different relative ages?
  publication-title: Trends Microbiol
  doi: 10.1016/j.tim.2005.11.004
  contributor:
    fullname: Ragan
– volume: 18
  start-page: 5
  year: 2002
  ident: 10.1016/j.gde.2009.10.001_bib66
  article-title: Eukaryotic genes in Mycobacterium tuberculosis could have a role in pathogenesis and immunomodulation
  publication-title: Trends Genet
  doi: 10.1016/S0168-9525(01)02529-X
  contributor:
    fullname: Gamieldien
– volume: 58
  start-page: 1
  year: 2007
  ident: 10.1016/j.gde.2009.10.001_bib11
  article-title: Horizontal gene transfer in plants
  publication-title: J Exp Bot
  doi: 10.1093/jxb/erl148
  contributor:
    fullname: Richardson
– volume: 100
  start-page: 7678
  year: 2003
  ident: 10.1016/j.gde.2009.10.001_bib8
  article-title: Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.1230951100
  contributor:
    fullname: Archibald
– volume: 2
  start-page: e1097
  year: 2007
  ident: 10.1016/j.gde.2009.10.001_bib21_1
  article-title: Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0001097
  contributor:
    fullname: Slot
– volume: 7
  start-page: 89
  year: 2007
  ident: 10.1016/j.gde.2009.10.001_bib20_1
  article-title: A complex and punctate distribution of three eukaryotic genes derived by lateral gene transfer
  publication-title: BMC Evol Biol
  doi: 10.1186/1471-2148-7-89
  contributor:
    fullname: Rogers
– volume: 101
  start-page: 3154
  year: 2004
  ident: 10.1016/j.gde.2009.10.001_bib55
  article-title: Gene transfer in the evolution of parasite nucleotide biosynthesis
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.0304686101
  contributor:
    fullname: Striepen
– volume: 320
  start-page: 1210
  year: 2008
  ident: 10.1016/j.gde.2009.10.001_bib58
  article-title: Massive horizontal gene transfer in bdelloid rotifers
  publication-title: Science
  doi: 10.1126/science.1156407
  contributor:
    fullname: Gladyshev
– volume: 34
  start-page: 265
  year: 2004
  ident: 10.1016/j.gde.2009.10.001_bib50
  article-title: A first glimpse into the pattern and scale of gene transfer in Apicomplexa
  publication-title: Int J Parasitol
  doi: 10.1016/j.ijpara.2003.11.025
  contributor:
    fullname: Huang
– volume: 102
  start-page: 11390
  year: 2005
  ident: 10.1016/j.gde.2009.10.001_bib26
  article-title: Lateral transfer of mating system in Stemphylium
  publication-title: Proc Natl Acad Sci U S A
  doi: 10.1073/pnas.0501918102
  contributor:
    fullname: Inderbitzin
– volume: 309
  start-page: 416
  year: 2005
  ident: 10.1016/j.gde.2009.10.001_bib12
  article-title: The genome of the African trypanosome Trypanosoma brucei
  publication-title: Science
  doi: 10.1126/science.1112642
  contributor:
    fullname: Berriman
– volume: 7
  start-page: 22
  year: 2006
  ident: 10.1016/j.gde.2009.10.001_bib34
  article-title: Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment
  publication-title: BMC Genomics
  doi: 10.1186/1471-2164-7-22
  contributor:
    fullname: Ricard
– volume: 399
  start-page: 323
  year: 1999
  ident: 10.1016/j.gde.2009.10.001_bib30
  article-title: Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima
  publication-title: Nature
  doi: 10.1038/20601
  contributor:
    fullname: Nelson
– volume: 7
  start-page: 230
  year: 2007
  ident: 10.1016/j.gde.2009.10.001_bib39_1
  article-title: The [FeFe] hydrogenase of Nyctotherus ovalis has a chimeric origin
  publication-title: BMC Evol Biol
  doi: 10.1186/1471-2148-7-230
  contributor:
    fullname: Boxma
– volume: 61
  start-page: 449
  year: 2002
  ident: 10.1016/j.gde.2009.10.001_bib4
  article-title: Gene transfer in bacteria: speciation without species?
  publication-title: Theor Popul Biol
  doi: 10.1006/tpbi.2002.1587
  contributor:
    fullname: Lawrence
– volume: 315
  start-page: 207
  year: 2007
  ident: 10.1016/j.gde.2009.10.001_bib32
  article-title: Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis
  publication-title: Science
  doi: 10.1126/science.1132894
  contributor:
    fullname: Carlton
– volume: 42
  start-page: 619
  year: 2008
  ident: 10.1016/j.gde.2009.10.001_bib40
  article-title: Genomic insights into marine microalgae
  publication-title: Annu Rev Genet
  doi: 10.1146/annurev.genet.42.110807.091417
  contributor:
    fullname: Parker
– volume: 23
  start-page: 1089
  year: 1997
  ident: 10.1016/j.gde.2009.10.001_bib48
  article-title: Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution
  publication-title: Mol Microbiol
  doi: 10.1046/j.1365-2958.1997.3101672.x
  contributor:
    fullname: Hacker
– volume: 409
  start-page: 860
  year: 2001
  ident: 10.1016/j.gde.2009.10.001_bib59
  article-title: Initial sequencing and analysis of the human genome
  publication-title: Nature
  doi: 10.1038/35057062
  contributor:
    fullname: Lander
– volume: 4
  start-page: 31
  year: 2006
  ident: 10.1016/j.gde.2009.10.001_bib65
  article-title: An exceptional horizontal gene transfer in plastids: gene replacement by a distant bacterial paralog and evidence that haptophyte and cryptophyte plastids are sisters
  publication-title: BMC Biol
  doi: 10.1186/1741-7007-4-31
  contributor:
    fullname: Rice
– volume: 292
  start-page: 1903
  year: 2001
  ident: 10.1016/j.gde.2009.10.001_bib60
  article-title: Microbial genes in the human genome: lateral transfer or gene loss?
  publication-title: Science
  doi: 10.1126/science.1061036
  contributor:
    fullname: Salzberg
– volume: 5
  start-page: 1517
  year: 2006
  ident: 10.1016/j.gde.2009.10.001_bib24
  article-title: Evolutionary origins of the eukaryotic shikimate pathway: gene fusions, horizontal gene transfer, and endosymbiotic replacements
  publication-title: Eukaryot Cell
  doi: 10.1128/EC.00106-06
  contributor:
    fullname: Richards
– volume: 13
  start-page: 75
  year: 2002
  ident: 10.1016/j.gde.2009.10.001_bib63
  article-title: Contamination in the draft of the human genome masquerades as lateral gene transfer
  publication-title: DNA Seq
  doi: 10.1080/10425170290023392
  contributor:
    fullname: Willerslev
– volume: 435
  start-page: 43
  year: 2005
  ident: 10.1016/j.gde.2009.10.001_bib13
  article-title: The genome of the social amoeba Dictyostelium discoideum
  publication-title: Nature
  doi: 10.1038/nature03481
  contributor:
    fullname: Eichinger
– volume: 284
  start-page: 2124
  year: 1999
  ident: 10.1016/j.gde.2009.10.001_bib2
  article-title: Phylogenetic classification and the universal tree
  publication-title: Science
  doi: 10.1126/science.284.5423.2124
  contributor:
    fullname: Doolittle
– volume: 183
  start-page: 6714
  year: 2001
  ident: 10.1016/j.gde.2009.10.001_bib37
  article-title: Presence of prokaryotic and eukaryotic species in all subgroups of the PP(i)-dependent group II phosphofructokinase protein family
  publication-title: J Bacteriol
  doi: 10.1128/JB.183.22.6714-6716.2001
  contributor:
    fullname: Muller
– volume: 15
  start-page: 70
  year: 2008
  ident: 10.1016/j.gde.2009.10.001_bib56_1
  article-title: Targeting a prokaryotic protein in a eukaryotic pathogen: identification of lead compounds against cryptosporidiosis
  publication-title: Chem Biol
  doi: 10.1016/j.chembiol.2007.12.010
  contributor:
    fullname: Umejiego
– volume: 55
  start-page: 374
  year: 2008
  ident: 10.1016/j.gde.2009.10.001_bib19
  article-title: A new divergent type of eukaryotic methionine adenosyltransferase is present in multiple distantly related secondary algal lineages
  publication-title: J Eukaryot Microbiol
  doi: 10.1111/j.1550-7408.2008.00349.x
  contributor:
    fullname: Sanchez-Perez
– volume: 62
  start-page: 1182
  year: 2005
  ident: 10.1016/j.gde.2009.10.001_bib5
  article-title: Lateral gene transfer in eukaryotes
  publication-title: Cell Mol Life Sci
  doi: 10.1007/s00018-005-4539-z
  contributor:
    fullname: Andersson
– volume: 317
  start-page: 1921
  year: 2007
  ident: 10.1016/j.gde.2009.10.001_bib33
  article-title: Genomic minimalism in the early diverging intestinal parasite Giardia lamblia
  publication-title: Science
  doi: 10.1126/science.1143837
  contributor:
    fullname: Morrison
– start-page: 239
  year: 2007
  ident: 10.1016/j.gde.2009.10.001_bib38
  article-title: The diversity of mitochondrion-related organelles amongst eukaryotic microbes
  contributor:
    fullname: Barbera
– volume: 383
  start-page: 495
  year: 1996
  ident: 10.1016/j.gde.2009.10.001_bib41
  article-title: A massive phytoplankton bloom induced by an ecosystem-scale iron fertilization experiment in the equatorial Pacific Ocean
  publication-title: Nature
  doi: 10.1038/383495a0
  contributor:
    fullname: Coale
– volume: 8
  start-page: 51
  year: 2007
  ident: 10.1016/j.gde.2009.10.001_bib22
  article-title: A genomic survey of the fish parasite Spironucleus salmonicida indicates genomic plasticity among diplomonads and significant lateral gene transfer in eukaryote genome evolution
  publication-title: BMC Genomics
  doi: 10.1186/1471-2164-8-51
  contributor:
    fullname: Andersson
– volume: 324
  start-page: 268
  year: 2009
  ident: 10.1016/j.gde.2009.10.001_bib46_1
  article-title: Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas
  publication-title: Science
  doi: 10.1126/science.1167222
  contributor:
    fullname: Worden
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Snippet Horizontal gene transfer (HGT) is known to have contributed to the content of eukaryotic genomes, but the direct effects of HGT on eukaryotic evolution are...
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SubjectTerms Adaptation, Biological
Animals
Biological Evolution
Eukaryota - genetics
Gene Transfer, Horizontal
Genome
Host-Parasite Interactions - genetics
Humans
Medical Education
Title Functional and ecological impacts of horizontal gene transfer in eukaryotes
URI https://www.clinicalkey.es/playcontent/1-s2.0-S0959437X0900149X
https://dx.doi.org/10.1016/j.gde.2009.10.001
https://www.ncbi.nlm.nih.gov/pubmed/19897356
https://search.proquest.com/docview/21284917
https://search.proquest.com/docview/734160285
Volume 19
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