Impact of sediment grain-size and biofilm age on epipelic microphytobenthos resuspension
Intertidal zones are dynamic areas, where tidal currents and wind-induced waves are responsible of resuspension of the sediment and associated microphytobenthos (MPB). Sediment composition (mud–sand mixtures) and MPB biofilm age are two major components involved in resuspension of epipelic microphyt...
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Published in | Journal of experimental marine biology and ecology Vol. 467; pp. 52 - 64 |
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Main Authors | , , , |
Format | Journal Article |
Language | English |
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Elsevier B.V
01.06.2015
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Abstract | Intertidal zones are dynamic areas, where tidal currents and wind-induced waves are responsible of resuspension of the sediment and associated microphytobenthos (MPB). Sediment composition (mud–sand mixtures) and MPB biofilm age are two major components involved in resuspension of epipelic microphytobenthos in muddy areas. However, their relative role in resuspension phenomenon must be better understood in controlled conditions. In this study, three mud–sand mixtures (Pure mud M1, 75% mud/25% sand M2 and 50% mud/50% sand M3) were tested with an epipelic MPB biofilm of different ages (3, 6 and 9days after inoculum) using an erodimeter flume. The biofilm biomass, physiological state, photosynthetic parameters and Extracellular Polymeric Substances (EPS) were surveyed as well as water content and ammonium concentration in the sediment. Chl a content and Suspended Particular Inorganic Matter (SPiM) erodability differed between treatments, biofilm being able to be eroded before sediment when it is well constituted (especially in pure mud M1). Between day 3 and day 9 of culture, biofilm age did significantly affect critical thresholds for Chl a erosion and sediment resuspension for mud–sand mixtures (M2 and M3). Sediment resuspension seemed to be also driven by physical constraints like differential compaction and vertical sand segregation as a function of mud content. Indeed, grain-size was the main factor involved in MPB resuspension phenomenon, with an optimum reached near a equilibrate ratio between mud and sand (50% mud–50% sand). Proteins of the EPS bound fraction (extracted with dowex resin) appeared to have a critical role in the pioneering stages of biofilm installation, allowing its formation in a less favorable environment caused by sand enrichment (mixtures M2 and M3). This effect of bound EPS must be mediated by an increasing cohesion and lowering sediment permeability. Carbohydrate content of the bound EPS fraction was directly related to the sediment (SPiM) erodability, independently from mixture type or biofilm age.
•Three sand–mud mixtures were tested with a presence of an epipelic MPB biofilm.•Biofilm and sediment erodability differed between treatments.•Biofilm development stage did significantly affect critical thresholds.•EPS bound fraction proteins play a critical role in biofilm installation.•Exportation of MPB to the water column decreased as a function of sand enrichment. |
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AbstractList | Intertidal zones are dynamic areas, where tidal currents and wind-induced waves are responsible of resuspension of the sediment and associated microphytobenthos (MPB). Sediment composition (mud–sand mixtures) and MPB biofilm age are two major components involved in resuspension of epipelic microphytobenthos in muddy areas. However, their relative role in resuspension phenomenon must be better understood in controlled conditions. In this study, three mud–sand mixtures (Pure mud M1, 75% mud/25% sand M2 and 50% mud/50% sand M3) were tested with an epipelic MPB biofilm of different ages (3, 6 and 9days after inoculum) using an erodimeter flume. The biofilm biomass, physiological state, photosynthetic parameters and Extracellular Polymeric Substances (EPS) were surveyed as well as water content and ammonium concentration in the sediment. Chl a content and Suspended Particular Inorganic Matter (SPiM) erodability differed between treatments, biofilm being able to be eroded before sediment when it is well constituted (especially in pure mud M1). Between day 3 and day 9 of culture, biofilm age did significantly affect critical thresholds for Chl a erosion and sediment resuspension for mud–sand mixtures (M2 and M3). Sediment resuspension seemed to be also driven by physical constraints like differential compaction and vertical sand segregation as a function of mud content. Indeed, grain-size was the main factor involved in MPB resuspension phenomenon, with an optimum reached near a equilibrate ratio between mud and sand (50% mud–50% sand). Proteins of the EPS bound fraction (extracted with dowex resin) appeared to have a critical role in the pioneering stages of biofilm installation, allowing its formation in a less favorable environment caused by sand enrichment (mixtures M2 and M3). This effect of bound EPS must be mediated by an increasing cohesion and lowering sediment permeability. Carbohydrate content of the bound EPS fraction was directly related to the sediment (SPiM) erodability, independently from mixture type or biofilm age. Intertidal zones are dynamic areas, where tidal currents and wind-induced waves are responsible of resuspension of the sediment and associated microphytobenthos (MPB). Sediment composition (mud–sand mixtures) and MPB biofilm age are two major components involved in resuspension of epipelic microphytobenthos in muddy areas. However, their relative role in resuspension phenomenon must be better understood in controlled conditions. In this study, three mud–sand mixtures (Pure mud M1, 75% mud/25% sand M2 and 50% mud/50% sand M3) were tested with an epipelic MPB biofilm of different ages (3, 6 and 9days after inoculum) using an erodimeter flume. The biofilm biomass, physiological state, photosynthetic parameters and Extracellular Polymeric Substances (EPS) were surveyed as well as water content and ammonium concentration in the sediment. Chl a content and Suspended Particular Inorganic Matter (SPiM) erodability differed between treatments, biofilm being able to be eroded before sediment when it is well constituted (especially in pure mud M1). Between day 3 and day 9 of culture, biofilm age did significantly affect critical thresholds for Chl a erosion and sediment resuspension for mud–sand mixtures (M2 and M3). Sediment resuspension seemed to be also driven by physical constraints like differential compaction and vertical sand segregation as a function of mud content. Indeed, grain-size was the main factor involved in MPB resuspension phenomenon, with an optimum reached near a equilibrate ratio between mud and sand (50% mud–50% sand). Proteins of the EPS bound fraction (extracted with dowex resin) appeared to have a critical role in the pioneering stages of biofilm installation, allowing its formation in a less favorable environment caused by sand enrichment (mixtures M2 and M3). This effect of bound EPS must be mediated by an increasing cohesion and lowering sediment permeability. Carbohydrate content of the bound EPS fraction was directly related to the sediment (SPiM) erodability, independently from mixture type or biofilm age. •Three sand–mud mixtures were tested with a presence of an epipelic MPB biofilm.•Biofilm and sediment erodability differed between treatments.•Biofilm development stage did significantly affect critical thresholds.•EPS bound fraction proteins play a critical role in biofilm installation.•Exportation of MPB to the water column decreased as a function of sand enrichment. |
Author | Lefebvre, Sébastien Rakotomalala, Christiane Orvain, Francis Ubertini, Martin |
Author_xml | – sequence: 1 givenname: Martin surname: Ubertini fullname: Ubertini, Martin email: martin_ubertini@hotmail.com organization: Université de Caen Basse-Normandie, UMR BOREA “Biologie des ORganismes et Ecosystèmes Aquatiques” (MNHN, UPMC, UCBN, CNRS-7208, IRD-207), Caen, France – sequence: 2 givenname: Sébastien surname: Lefebvre fullname: Lefebvre, Sébastien organization: Université de Lille1, UMR CNRS 8187 LOG “Laboratoire d'Océanologie et Géosciences”, Station Marine de Wimereux, Wimereux, France – sequence: 3 givenname: Christiane surname: Rakotomalala fullname: Rakotomalala, Christiane organization: Université de Caen Basse-Normandie, UMR BOREA “Biologie des ORganismes et Ecosystèmes Aquatiques” (MNHN, UPMC, UCBN, CNRS-7208, IRD-207), Caen, France – sequence: 4 givenname: Francis surname: Orvain fullname: Orvain, Francis organization: Université de Caen Basse-Normandie, UMR BOREA “Biologie des ORganismes et Ecosystèmes Aquatiques” (MNHN, UPMC, UCBN, CNRS-7208, IRD-207), Caen, France |
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Cites_doi | 10.3354/meps223101 10.1021/ac60111a017 10.1002/bit.21306 10.1007/BF00391943 10.3354/meps09390 10.4319/lo.2007.52.2.0577 10.3354/meps278205 10.1016/j.csr.2008.01.005 10.1016/j.aquabot.2011.02.010 10.1357/002224003322981165 10.1016/S1568-2692(08)80013-7 10.1007/s00227-004-1300-3 10.1016/j.ecss.2005.05.005 10.1046/j.1529-8817.2002.00094.x 10.1016/j.bse.2010.09.014 10.1051/lhb/1989001 10.1046/j.1529-8817.2001.037004517.x 10.1186/1467-4866-2-75 10.1007/s00227-004-1504-6 10.1016/j.csr.2004.01.002 10.1016/0143-1471(85)90009-1 10.1111/j.1472-4669.2007.00108.x 10.1016/S0278-4343(03)00006-2 10.1016/S0022-0981(01)00312-4 10.1080/0967026042000201885 10.1016/S0378-3839(96)00002-6 10.3354/meps09698 10.1016/S0378-3839(97)00013-6 10.4319/lo.1995.40.4.0776 10.4319/lo.1989.34.1.0223 10.1016/j.jembe.2011.05.027 10.1016/j.seares.2005.08.002 10.1061/(ASCE)HY.1943-7900.0000627 10.1890/0012-9658(2001)082[3449:DASSOI]2.0.CO;2 10.1111/j.1529-8817.2004.03063.x 10.1016/0003-2697(76)90527-3 10.1016/0272-7714(86)90056-9 10.1371/journal.pone.0013794 10.1007/s002489900066 10.4319/lo.1998.43.7.1578 10.1016/j.csr.2005.11.007 10.1016/j.seares.2003.04.001 10.3354/meps251115 10.1038/ismej.2010.91 10.1016/S0272-7714(02)00336-0 10.1046/j.1529-8817.2004.03083.x 10.1016/j.csr.2010.12.009 10.1016/0304-3800(88)90057-9 10.3354/meps193261 10.4319/lo.1998.43.1.0065 10.1007/s11368-009-0142-5 10.2307/3544606 10.1046/j.1529-8817.2003.02043.x 10.1007/s00248-004-0020-z 10.1016/j.watres.2008.06.019 10.1371/journal.pone.0044155 10.1071/MF07164 10.1139/f99-128 10.1016/j.ecss.2005.04.008 10.1016/j.seares.2014.02.018 10.1046/j.1529-8817.2000.99148.x 10.1016/j.csr.2005.11.016 10.1007/s00248-002-2027-7 10.1016/S0022-0981(00)00166-0 10.1016/j.csr.2008.03.019 10.1007/s002489900186 |
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Keywords | Erodimeter Substances Sediment Resuspension Biofilm Extracellular polymeric Microphytobenthos |
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References | Parkhill, Maillet, Cullen (bb0395) 2001; 37 Migniot (bb0190) 1989; 1 Holmes, Aminot, Kérouel, Hooker, Peterson (bb0120) 1999; 56 Tolhurst, Defew, Brouwer, Wolfstein (bb0330) 2006; 26 De Brouwer, Wolfstein, Ruddy, Jones, Stal (bb0050) 2005; 49 Ubertini, Lefebvre, Gangnery, Grangere, Le Gendre, Orvain (bb9005) 2012; 7 Le Hir, Canna, Waelesb, Jestina, Bassoulleta (bb0135) 2008; 9 Serôdio (bb0270) 2003; 39 Ziervogel, Forster (bb0380) 2006; 55 Gerbersdorf, Jancke, Westrich (bb0100) 2007; 7 Tolhurst, Watts, Vardy, Saunders, Consalvey, Paterson (bb0340) 2008; 28 Defew, Tolhurst, Paterson, Hagerthey (bb0065) 2003; 61–70 Blanchard, Guarini, Dang, Richard (bb0025) 2004; 40 Behrenfeld, Prasil, Babin, Bruyant (bb0020) 2004; 40 Panagiotopoulos, Voulgaris, Collins (bb0390) 1997; 32 Spears, Saunders (bb0300) 2008; 59 Mitbavkar, Anil (bb9000) 2004; 145 Eilers, Peeters (bb0085) 1988; 42 de Jonge, van Beusekom (bb0055) 1995; 40 Sutherland, Amos, Grant (bb0320) 1998; 43 Orvain, Galois, Barnard (bb0210) 2003; 45 Orvain, Sauriau, Sygut, Joassard, Le Hir (bb0225) 2004; 278 Bradford (bb0035) 1976; 72 Takahashi, Ledauphin, Goux, Orvain (bb0325) 2009; 1–10 Lelieveld, Pilditchb, Green (bb0160) 2003; 57 Guizien, Orvain, Duchêne, Le Hir (bb0110) 2012; 138 Wolf (bb0365) 2007; 97 Orvain, Lefebvre, Montepini, Sébire, Gangnery, Sylvand (bb0220) 2012; 458 Lefebvre, Mouget, Lavaud (bb0155) 2011; 95 Cartaxana, Ruivo, Hubas, Davidson, Serôdio, Jesus (bb0040) 2011; 405 Van de Koppel, Herman, Thoolen, Heip (bb0350) 2001; 82 Ahmad, Dong, Mamat (bb0010) 2011; 5 Dubois, Gilles, Hamilton, Rebers, Smith (bb0075) 1956; 28 Zetsche, Paterson, Lumsdon, Witte (bb0375) 2011; 441 Lucas (bb0175) 2003; 50 McKew, Taylor, McGenity, Underwood (bb0185) 2011; 5 Chiovitti, Molino, Crawford, Teng, Spurck, Wetherbee (bb0045) 2004; 39 Lorenzen (bb0165) 1967; 343–346 Mitchener, Torfs (bb0195) 1996; 29 MacIntyre, Kana, Anning, Geider (bb0385) 2002; 38 Perkins (bb0245) 2003; 23 Grant, Bathmann, Mills (bb0105) 1986; 23 Perkins, Underwood, Brotas, Snow, Jesus, Ribeiro (bb0250) 2001; 223 Waeles, Hir, Lesueur (bb0355) 2008 Orvain, Le Hir, Sauriau (bb0215) 2003; 61 Le Hir, Monbet, Orvain (bb0145) 2007; 27 Serôdio, Vieira, Cruz, Barroso (bb0275) 2005; 146 Staats, Stal, De Winder, Mur (bb0310) 2000; 193 Paterson (bb0240) 1989; 34 Wigglesworth-Cooksey, Berglund, Cooksey (bb0360) 2001; 2 Andersen, Pejrup (bb0015) 2002; 737–745 Pierre, Graber, Orvain, Dupuy, Maugard (bb0255) 2010; 38 Le Hir, Cayocca, Waeles (bb0140) 2011; 31 Jesus, Brota, Marani, Paterson (bb0125) 2005; 65 Blanchard, Guarini, Orvain, Sauriau (bb0030) 2001; 264 Droppo, Ross, Skafel, Liss (bb0070) 2007; 52 Serôdio, Vieira, Cruz (bb0285) 2008; 28 De Winder, Staats, Stal, Paterson (bb0060) 1999; 42 Yallop, Paterson, Wellsbury (bb0370) 2000; 39 Saburova, Polikarpov (bb0265) 2003; 251 Gerbersdorf, Bittner, Lubarsky, Manz, Paterson (bb0095) 2009; 9 Admiraal, Peletier, Brouwer (bb0005) 1994; 42 Ehrenhauss, Witte, Janssen, Huettel (bb0080) 2004; 24 Lubarsky, Hubas, Chocholek, Larson, Manz, Paterson, Gerbersdorf (bb0170) 2010; 5 Orvain, De Crignis, Guizien, Lefebvre, Mallet, Takahashi, Dupuy (bb0205) 2014; 92 Smith, Underwood (bb0290) 1998; 43 Stone, Krishnappan, Emelko (bb0315) 2008; 42 Friend, Lucas, Holligan, Collins (bb0090) 2008; 6 Staats, Stal, Mur (bb0305) 2000; 249 Morris (bb0200) 2005 Smith, Underwood (bb0295) 2001; 333 Underwood, Smith (bb0345) 1998; 35 Holland, Zingmark, Dean (bb0115) 1974; 27 Paarlberg, Knaapen, Devries, Hulscher, Wang (bb0230) 2005; 64 Krantzberg (bb0130) 1985; 39 Tolhurst, Jesus, Brotas, Paterson (bb0335) 2003; 183–193 Ziervogel (10.1016/j.jembe.2015.02.007_bb0380) 2006; 55 Lubarsky (10.1016/j.jembe.2015.02.007_bb0170) 2010; 5 Orvain (10.1016/j.jembe.2015.02.007_bb0210) 2003; 45 Lorenzen (10.1016/j.jembe.2015.02.007_bb0165) 1967; 343–346 Saburova (10.1016/j.jembe.2015.02.007_bb0265) 2003; 251 Waeles (10.1016/j.jembe.2015.02.007_bb0355) 2008 Defew (10.1016/j.jembe.2015.02.007_bb0065) 2003; 61–70 Orvain (10.1016/j.jembe.2015.02.007_bb0215) 2003; 61 Pierre (10.1016/j.jembe.2015.02.007_bb0255) 2010; 38 Paarlberg (10.1016/j.jembe.2015.02.007_bb0230) 2005; 64 de Jonge (10.1016/j.jembe.2015.02.007_bb0055) 1995; 40 Holland (10.1016/j.jembe.2015.02.007_bb0115) 1974; 27 Lelieveld (10.1016/j.jembe.2015.02.007_bb0160) 2003; 57 Grant (10.1016/j.jembe.2015.02.007_bb0105) 1986; 23 Andersen (10.1016/j.jembe.2015.02.007_bb0015) 2002; 737–745 Ehrenhauss (10.1016/j.jembe.2015.02.007_bb0080) 2004; 24 Lefebvre (10.1016/j.jembe.2015.02.007_bb0155) 2011; 95 Stone (10.1016/j.jembe.2015.02.007_bb0315) 2008; 42 Le Hir (10.1016/j.jembe.2015.02.007_bb0145) 2007; 27 Orvain (10.1016/j.jembe.2015.02.007_bb0205) 2014; 92 Tolhurst (10.1016/j.jembe.2015.02.007_bb0330) 2006; 26 Wigglesworth-Cooksey (10.1016/j.jembe.2015.02.007_bb0360) 2001; 2 De Winder (10.1016/j.jembe.2015.02.007_bb0060) 1999; 42 Tolhurst (10.1016/j.jembe.2015.02.007_bb0335) 2003; 183–193 Le Hir (10.1016/j.jembe.2015.02.007_bb0135) 2008; 9 Zetsche (10.1016/j.jembe.2015.02.007_bb0375) 2011; 441 McKew (10.1016/j.jembe.2015.02.007_bb0185) 2011; 5 Migniot (10.1016/j.jembe.2015.02.007_bb0190) 1989; 1 Spears (10.1016/j.jembe.2015.02.007_bb0300) 2008; 59 Mitbavkar (10.1016/j.jembe.2015.02.007_bb9000) 2004; 145 Serôdio (10.1016/j.jembe.2015.02.007_bb0285) 2008; 28 Blanchard (10.1016/j.jembe.2015.02.007_bb0025) 2004; 40 Chiovitti (10.1016/j.jembe.2015.02.007_bb0045) 2004; 39 Serôdio (10.1016/j.jembe.2015.02.007_bb0270) 2003; 39 Underwood (10.1016/j.jembe.2015.02.007_bb0345) 1998; 35 MacIntyre (10.1016/j.jembe.2015.02.007_bb0385) 2002; 38 Guizien (10.1016/j.jembe.2015.02.007_bb0110) 2012; 138 Gerbersdorf (10.1016/j.jembe.2015.02.007_bb0100) 2007; 7 Gerbersdorf (10.1016/j.jembe.2015.02.007_bb0095) 2009; 9 Ahmad (10.1016/j.jembe.2015.02.007_bb0010) 2011; 5 Staats (10.1016/j.jembe.2015.02.007_bb0310) 2000; 193 Perkins (10.1016/j.jembe.2015.02.007_bb0250) 2001; 223 Staats (10.1016/j.jembe.2015.02.007_bb0305) 2000; 249 Blanchard (10.1016/j.jembe.2015.02.007_bb0030) 2001; 264 Mitchener (10.1016/j.jembe.2015.02.007_bb0195) 1996; 29 Orvain (10.1016/j.jembe.2015.02.007_bb0220) 2012; 458 Smith (10.1016/j.jembe.2015.02.007_bb0295) 2001; 333 Admiraal (10.1016/j.jembe.2015.02.007_bb0005) 1994; 42 Bradford (10.1016/j.jembe.2015.02.007_bb0035) 1976; 72 Holmes (10.1016/j.jembe.2015.02.007_bb0120) 1999; 56 Tolhurst (10.1016/j.jembe.2015.02.007_bb0340) 2008; 28 Jesus (10.1016/j.jembe.2015.02.007_bb0125) 2005; 65 Lucas (10.1016/j.jembe.2015.02.007_bb0175) 2003; 50 Orvain (10.1016/j.jembe.2015.02.007_bb0225) 2004; 278 Le Hir (10.1016/j.jembe.2015.02.007_bb0140) 2011; 31 Dubois (10.1016/j.jembe.2015.02.007_bb0075) 1956; 28 Smith (10.1016/j.jembe.2015.02.007_bb0290) 1998; 43 Van de Koppel (10.1016/j.jembe.2015.02.007_bb0350) 2001; 82 Krantzberg (10.1016/j.jembe.2015.02.007_bb0130) 1985; 39 Behrenfeld (10.1016/j.jembe.2015.02.007_bb0020) 2004; 40 Parkhill (10.1016/j.jembe.2015.02.007_bb0395) 2001; 37 Friend (10.1016/j.jembe.2015.02.007_bb0090) 2008; 6 Perkins (10.1016/j.jembe.2015.02.007_bb0245) 2003; 23 Serôdio (10.1016/j.jembe.2015.02.007_bb0275) 2005; 146 Paterson (10.1016/j.jembe.2015.02.007_bb0240) 1989; 34 Ubertini (10.1016/j.jembe.2015.02.007_bb9005) 2012; 7 De Brouwer (10.1016/j.jembe.2015.02.007_bb0050) 2005; 49 Droppo (10.1016/j.jembe.2015.02.007_bb0070) 2007; 52 Morris (10.1016/j.jembe.2015.02.007_bb0200) 2005 Sutherland (10.1016/j.jembe.2015.02.007_bb0320) 1998; 43 Wolf (10.1016/j.jembe.2015.02.007_bb0365) 2007; 97 Cartaxana (10.1016/j.jembe.2015.02.007_bb0040) 2011; 405 Eilers (10.1016/j.jembe.2015.02.007_bb0085) 1988; 42 Yallop (10.1016/j.jembe.2015.02.007_bb0370) 2000; 39 Takahashi (10.1016/j.jembe.2015.02.007_bb0325) 2009; 1–10 Panagiotopoulos (10.1016/j.jembe.2015.02.007_bb0390) 1997; 32 |
References_xml | – volume: 38 start-page: 17 year: 2002 end-page: 38 ident: bb0385 article-title: Photoacclimation of photosynthesis irradiance response curves and photosynthetic pigments in microalgae and cyanobacteria publication-title: J. Phycol. – year: 2005 ident: bb0200 article-title: Quantifying Primary Production Of Microphytobenthos: Application Of Optical Methods – volume: 28 start-page: 1363 year: 2008 end-page: 1375 ident: bb0285 article-title: Photosynthetic activity, photoprotection and photoinhibition in intertidal microphytobenthos as studied in situ using variable chlorophyll fluorescence publication-title: Cont. Shelf Res. – volume: 42 start-page: 131 year: 1999 end-page: 146 ident: bb0060 article-title: Carbohydrate secretion by phototrophic communities in tidal sediments – volume: 37 start-page: 517 year: 2001 end-page: 529 ident: bb0395 article-title: Fluorescence-based maximal quantum yield for PSII as a diagnostic of nutrient stress publication-title: Journal of Phycology – volume: 251 start-page: 115 year: 2003 end-page: 126 ident: bb0265 article-title: Diatom activity within soft sediments: behavorial and physiological processes publication-title: Mar. Ecol. Prog. Ser. – volume: 56 start-page: 1801 year: 1999 end-page: 1808 ident: bb0120 article-title: A simple and precise method for measuring ammonium in marine and freshwater ecosystems publication-title: Can. J. Fish. Aquat. Sci. – volume: 43 start-page: 65 year: 1998 end-page: 72 ident: bb0320 article-title: The effect of carbohydrate production by the diatom publication-title: Limnol. Oceanogr. – volume: 38 start-page: 917 year: 2010 end-page: 923 ident: bb0255 article-title: Biochemical characterization of extracellular polymeric substances extracted from an intertidal mudflat using a cation exchange resin publication-title: Biochem. Syst. Ecol. – volume: 7 start-page: 1 year: 2012 end-page: 17 ident: bb9005 article-title: Spatial variability of benthic-pelagic coupling in an estuary ecosystem: consequences for microphytobenthos resuspension phenomenon publication-title: Plos ONE – volume: 92 start-page: 6 year: 2014 end-page: 18 ident: bb0205 article-title: Tidal and seasonal effects on the consortium of bacteria, microphytobenthos and exopolymers in natural intertidal biofilms (Brouage, France) publication-title: J. Sea Res. – volume: 1–10 year: 2009 ident: bb0325 article-title: Optimising extraction of extracellular polymeric substances (EPS) from benthic diatoms: comparison of the efficiency of six EPS extraction methods publication-title: Mar. Freshwat. Res. – volume: 2 start-page: 75 year: 2001 ident: bb0360 article-title: Cell–cell and cell–surface interactions in an illuminated biofilm: implications for marine sediment stabilization publication-title: Geochem. Trans. – volume: 5 start-page: 53 year: 2011 end-page: 71 ident: bb0010 article-title: The critical shear stresses for sand and mud mixture publication-title: Appl. Math. Comput. – volume: 24 start-page: 721 year: 2004 end-page: 737 ident: bb0080 article-title: Decomposition of diatoms and nutrient dynamics in permeable North Sea sediments publication-title: Cont. Shelf Res. – volume: 39 start-page: 99 year: 1985 end-page: 122 ident: bb0130 article-title: The influence of bioturbation on physical, chemical and biological parameters in aquatic environments: a review publication-title: Environ. Pollut. A, Ecol. Biol. – volume: 28 start-page: 1217 year: 2008 end-page: 1230 ident: bb0340 article-title: The effects of simulated rain on the erosion threshold and biogeochemical properties of intertidal sediments publication-title: Cont. Shelf Res. – volume: 737–745 year: 2002 ident: bb0015 article-title: Biological mediation of the settling velocity of bed material eroded from an intertidal mudflat, the Danish Wadden Sea publication-title: Online – volume: 23 start-page: 225 year: 1986 end-page: 238 ident: bb0105 article-title: The interaction between benthic diatom films and sediment transport publication-title: Estuar. Coast. Shelf Sci. – volume: 59 start-page: 313 year: 2008 end-page: 321 ident: bb0300 article-title: Microalgal sediment biostabilisation along a salinity gradient in the Eden Estuary, Scotland: unravelling a paradox publication-title: Mar. Freshwat. Res. – volume: 7 start-page: 25 year: 2007 end-page: 35 ident: bb0100 article-title: Sediment properties for assessing the erosion risk of contaminated riverine sites A comprehensive approach to evaluate sediment properties and their covariance patterns over – volume: 5 start-page: e13794 year: 2010 ident: bb0170 article-title: The stabilisation potential of individual and mixed assemblages of natural bacteria and microalgae publication-title: PLoS ONE – volume: 65 start-page: 30 year: 2005 end-page: 42 ident: bb0125 article-title: Spatial dynamics of microphytobenthos determined by PAM fluorescence publication-title: Estuar. Coast. Shelf Sci. – volume: 61 start-page: 823 year: 2003 end-page: 851 ident: bb0215 article-title: A model of fluff layer erosion and subsequent bed erosion in the presence of the bioturbator, publication-title: J. Mar. Res. – volume: 405 start-page: 120 year: 2011 end-page: 127 ident: bb0040 article-title: Physiological versus behavioral photoprotection in intertidal epipelic and epipsammic benthic diatom communities publication-title: J. Exp. Mar. Biol. Ecol. – volume: 31 start-page: S135 year: 2011 end-page: S149 ident: bb0140 article-title: Dynamics of sand and mud mixtures: a multiprocess-based modelling strategy publication-title: Cont. Shelf Res. – volume: 458 start-page: 53 year: 2012 end-page: 68 ident: bb0220 article-title: Spatial and temporal interaction between sediment and microphytobenthos in a temperate estuarine macro-intertidal bay publication-title: Mar. Ecol. Prog. Ser. – volume: 264 start-page: 85 year: 2001 end-page: 100 ident: bb0030 article-title: Dynamic behaviour of benthic microalgal biomass in intertidal mudflats publication-title: J. Exp. Mar. Biol. Ecol. – volume: 49 start-page: 501 year: 2005 end-page: 512 ident: bb0050 article-title: Biogenic stabilization of intertidal sediments: the importance of extracellular polymeric substances produced by benthic diatoms publication-title: Microb. Ecol. – volume: 1 start-page: 11 year: 1989 end-page: 29 ident: bb0190 article-title: Tassement et rhéologie des vases, 1ère partie publication-title: La Houille Blanche – volume: 183–193 year: 2003 ident: bb0335 article-title: Diatom migration and sediment armouring — an example from the Tagus Estuary, Portugal publication-title: Mar. Ecol. – volume: 40 start-page: 692 year: 2004 end-page: 696 ident: bb0025 article-title: Characterizing and quantifying photoinhibition in intertidal microphytobenthos publication-title: J. Phycol. – volume: 333 start-page: 321 year: 2001 end-page: 333 ident: bb0295 article-title: The production of extracellular carbohydrates by estuarine benthic diatoms: the effects of growth phase and light and dark treatment publication-title: J. Phycol. – volume: 72 start-page: 248 year: 1976 end-page: 254 ident: bb0035 article-title: A rapid and sensitive method for the quantitation of microgram quantities of protein using the principle of protein dye binding publication-title: Anal. Biochem. – volume: 343–346 year: 1967 ident: bb0165 article-title: Determination of chlorophyll and phaeopigments: spectrophotometric equations publication-title: Limnol. Oceanogr. – year: 2008 ident: bb0355 article-title: Sediment and ecohydraulics publication-title: INTERCOH 2005 – volume: 43 start-page: 1578 year: 1998 end-page: 1591 ident: bb0290 article-title: Exopolymer production by intertidal epipelic diatoms publication-title: Limnol. Oceanogr. – volume: 40 start-page: 776 year: 1995 end-page: 778 ident: bb0055 article-title: Wind and tide induced resuspension of sediment and microphytobenthos from tidal flats in the Ems estuary publication-title: Limnol. Oceanogr. – volume: 82 start-page: 3449 year: 2001 end-page: 3461 ident: bb0350 article-title: Do alternate stable states occur in natural ecosystems? Evidence from a tidal flat publication-title: Ecology – volume: 42 start-page: 30 year: 1994 end-page: 40 ident: bb0005 article-title: The seasonal succession patterns of diatom species on an intertidal mudflat: an experimental analysis publication-title: Oikos – volume: 23 start-page: 575 year: 2003 end-page: 586 ident: bb0245 article-title: Changes in microphytobenthic chlorophyll a and EPS resulting from sediment compaction due to de-watering: opposing patterns in concentration and content publication-title: Cont. Shelf Res. – volume: 26 start-page: 351 year: 2006 end-page: 362 ident: bb0330 article-title: Small-scale temporal and spatial variability in the erosion threshold and properties of cohesive intertidal sediments publication-title: Cont. Shelf Res. – volume: 35 start-page: 116 year: 1998 end-page: 125 ident: bb0345 article-title: Predicting epipelic diatom exopolymer concentrations in intertidal sediments from sediment chlorophyll a publication-title: Microb. Ecol. – volume: 249 start-page: 13 year: 2000 end-page: 27 ident: bb0305 article-title: Exopolysaccharide production by the epipelic diatom publication-title: J. Exp. Mar. Biol. Ecol. – volume: 441 start-page: 49 year: 2011 end-page: 63 ident: bb0375 article-title: Temporal variation in the sediment permeability of an intertidal sandflat publication-title: Mar. Ecol. Prog. Ser. – volume: 9 start-page: 640 year: 2009 end-page: 652 ident: bb0095 article-title: Microbial assemblages as ecosystem engineers of sediment stability publication-title: J. Soils Sediments – volume: 95 start-page: 1 year: 2011 end-page: 8 ident: bb0155 article-title: Duration of rapid light curves for determining in situ the photosynthesis of microphytobenthos biofilm publication-title: Aquat. Bot. – volume: 145 start-page: 9 year: 2004 end-page: 20 ident: bb9000 article-title: Vertical migratory rhythms of benthic diatoms in a tropical intertidal sand flat: influence of irradiance and tides publication-title: Mar. Biol. – volume: 97 start-page: 1064 year: 2007 end-page: 1079 ident: bb0365 article-title: Kinetic modeling of phototrophic biofilms: the PHOBIA model publication-title: Biotechnol. Bioeng. – volume: 32 start-page: 19 year: 1997 end-page: 43 ident: bb0390 article-title: The influence of clay on the threshold of movement of fine sandy beds publication-title: Coast. Eng. – volume: 39 start-page: 117 year: 2004 end-page: 128 ident: bb0045 article-title: The glucans extracted with warm water from diatoms are mainly derived from intracellular chrysolaminaran and not extracellular polysaccharides publication-title: Eur. J. Phycol. – volume: 50 start-page: 301 year: 2003 end-page: 308 ident: bb0175 article-title: Observations of resuspended diatoms in the turbid tidal edge publication-title: J. Sea Res. – volume: 40 start-page: 4 year: 2004 end-page: 25 ident: bb0020 article-title: In search of a physiological basis for covariations in light-limited and light-saturated photosynthesis publication-title: J. Phycol. – volume: 39 start-page: 116 year: 2000 end-page: 127 ident: bb0370 article-title: Interrelationships between rates of microbial production, exopolymer production, microbial biomass, and sediment stability in biofilms of intertidal sediments publication-title: Microb. Ecol. – volume: 52 start-page: 577 year: 2007 end-page: 589 ident: bb0070 article-title: Biostabilization of cohesive sediment beds in a freshwater wave-dominated environment publication-title: Limnol. Oceanogr. – volume: 39 start-page: 33 year: 2003 end-page: 46 ident: bb0270 article-title: A chlorophyll fluorescence index to estimate short-term rates of photosynthesis by intertidal microphytobenthos publication-title: J. Phycol. – volume: 61–70 year: 2003 ident: bb0065 article-title: Can the stability of intertidal sediments be predicted from proxy parameters? An in situ investigation – volume: 278 start-page: 205 year: 2004 end-page: 223 ident: bb0225 article-title: Interacting effects of publication-title: Mar. Ecol. Prog. Ser. – volume: 6 start-page: 70 year: 2008 end-page: 82 ident: bb0090 article-title: Microalgal mediation of ripple mobility publication-title: Geobiology – volume: 29 start-page: 1 year: 1996 end-page: 25 ident: bb0195 article-title: Erosion of mud/sand mixtures publication-title: Coast. Eng. – volume: 42 start-page: 4179 year: 2008 end-page: 4187 ident: bb0315 article-title: The effect of bed age and shear stress on the particle morphology of eroded cohesive river sediment in an annular flume publication-title: Water Res. – volume: 9 start-page: 137 year: 2008 end-page: 153 ident: bb0135 article-title: Erodibility of natural sediments: experiments on sand/mud mixtures from laboratory and field erosion tests publication-title: Proceedings in Marine Science – volume: 42 start-page: 199 year: 1988 end-page: 215 ident: bb0085 article-title: A model for the relationship between light intensity and the rate of photosynthesis in phytoplankton publication-title: Ecol. Model. – volume: 55 start-page: 43 year: 2006 end-page: 53 ident: bb0380 article-title: Do benthic diatoms influence erosion thresholds of coastal subtidal sediments? publication-title: J. Sea Res. – volume: 64 start-page: 577 year: 2005 end-page: 590 ident: bb0230 article-title: Biological influences on morphology and bed composition of an intertidal flat publication-title: Estuar. Coast. Shelf Sci. – volume: 223 start-page: 101 year: 2001 end-page: 112 ident: bb0250 article-title: Responses of microphytobenthos to light: primary production and carbohydrate allocation over an emersion period publication-title: Mar. Ecol. Prog. Ser. – volume: 146 start-page: 903 year: 2005 end-page: 914 ident: bb0275 article-title: Short-term variability in the photosynthetic activity of microphytobenthos as detected by measuring rapid light curves using variable fluorescence publication-title: Mar. Biol. – volume: 138 start-page: 979 year: 2012 end-page: 984 ident: bb0110 article-title: Accounting for rough bed friction factors of mud beds due to biological activity in erosion experiments publication-title: J. Hydraul. Eng. – volume: 45 start-page: 237 year: 2003 end-page: 251 ident: bb0210 article-title: Carbohydrate production in relation to microphytobenthic biofilm development: an integrated approach in a tidal mesocosm publication-title: Microb. Ecol. – volume: 34 start-page: 223 year: 1989 end-page: 234 ident: bb0240 article-title: Short-term changes in the erodibility of intertidal cohesive sediments related to the migratory behaviour of epipelic diatoms publication-title: Limnol. Oceanogr. – volume: 27 start-page: 191 year: 1974 end-page: 196 ident: bb0115 article-title: Quantitative evidence concerning the stabilization of sediments by marine benthic diatoms publication-title: Mar. Biol. – volume: 5 start-page: 1 year: 2011 end-page: 30 ident: bb0185 article-title: Resistance and resilience of benthic biofilm communities from a temperate saltmarsh to desiccation and rewetting publication-title: ISME J. – volume: 27 start-page: 1116 year: 2007 end-page: 1142 ident: bb0145 article-title: Sediment erodability in sediment transport modelling: can we account for biota effects? publication-title: Cont. Shelf Res. – volume: 28 start-page: 350 year: 1956 end-page: 356 ident: bb0075 article-title: Colorimetric method for determination of sugars and related substances publication-title: Anal. Chem. – volume: 57 start-page: 123 year: 2003 end-page: 136 ident: bb0160 article-title: Variation in sediment stability and relation to indicators of microbial abundance in the Okura Estuary, New Zealand publication-title: Estuar. Coast. Shelf Sci. – volume: 193 start-page: 261 year: 2000 end-page: 269 ident: bb0310 article-title: Oxygenic photosynthesis as driving process in exopolysaccharide production of benthic diatoms publication-title: Mar. Ecol. Prog. Ser. – volume: 737–745 year: 2002 ident: 10.1016/j.jembe.2015.02.007_bb0015 article-title: Biological mediation of the settling velocity of bed material eroded from an intertidal mudflat, the Danish Wadden Sea publication-title: Online – volume: 223 start-page: 101 year: 2001 ident: 10.1016/j.jembe.2015.02.007_bb0250 article-title: Responses of microphytobenthos to light: primary production and carbohydrate allocation over an emersion period publication-title: Mar. Ecol. Prog. Ser. doi: 10.3354/meps223101 – volume: 28 start-page: 350 year: 1956 ident: 10.1016/j.jembe.2015.02.007_bb0075 article-title: Colorimetric method for determination of sugars and related substances publication-title: Anal. Chem. doi: 10.1021/ac60111a017 – volume: 42 start-page: 131 year: 1999 ident: 10.1016/j.jembe.2015.02.007_bb0060 – volume: 97 start-page: 1064 year: 2007 ident: 10.1016/j.jembe.2015.02.007_bb0365 article-title: Kinetic modeling of phototrophic biofilms: the PHOBIA model publication-title: Biotechnol. Bioeng. doi: 10.1002/bit.21306 – volume: 27 start-page: 191 year: 1974 ident: 10.1016/j.jembe.2015.02.007_bb0115 article-title: Quantitative evidence concerning the stabilization of sediments by marine benthic diatoms publication-title: Mar. Biol. doi: 10.1007/BF00391943 – volume: 441 start-page: 49 year: 2011 ident: 10.1016/j.jembe.2015.02.007_bb0375 article-title: Temporal variation in the sediment permeability of an intertidal sandflat publication-title: Mar. Ecol. Prog. Ser. doi: 10.3354/meps09390 – volume: 52 start-page: 577 year: 2007 ident: 10.1016/j.jembe.2015.02.007_bb0070 article-title: Biostabilization of cohesive sediment beds in a freshwater wave-dominated environment publication-title: Limnol. Oceanogr. doi: 10.4319/lo.2007.52.2.0577 – volume: 278 start-page: 205 year: 2004 ident: 10.1016/j.jembe.2015.02.007_bb0225 article-title: Interacting effects of Hydrobia ulvae bioturbation and microphytobenthos on the erodibility of mudflat sediments publication-title: Mar. Ecol. Prog. Ser. doi: 10.3354/meps278205 – volume: 5 start-page: 53 year: 2011 ident: 10.1016/j.jembe.2015.02.007_bb0010 article-title: The critical shear stresses for sand and mud mixture publication-title: Appl. Math. Comput. – volume: 28 start-page: 1217 year: 2008 ident: 10.1016/j.jembe.2015.02.007_bb0340 article-title: The effects of simulated rain on the erosion threshold and biogeochemical properties of intertidal sediments publication-title: Cont. Shelf Res. doi: 10.1016/j.csr.2008.01.005 – volume: 95 start-page: 1 year: 2011 ident: 10.1016/j.jembe.2015.02.007_bb0155 article-title: Duration of rapid light curves for determining in situ the photosynthesis of microphytobenthos biofilm publication-title: Aquat. Bot. doi: 10.1016/j.aquabot.2011.02.010 – volume: 343–346 year: 1967 ident: 10.1016/j.jembe.2015.02.007_bb0165 article-title: Determination of chlorophyll and phaeopigments: spectrophotometric equations publication-title: Limnol. Oceanogr. – volume: 61 start-page: 823 year: 2003 ident: 10.1016/j.jembe.2015.02.007_bb0215 article-title: A model of fluff layer erosion and subsequent bed erosion in the presence of the bioturbator, Hydrobia ulvae publication-title: J. Mar. Res. doi: 10.1357/002224003322981165 – volume: 9 start-page: 137 year: 2008 ident: 10.1016/j.jembe.2015.02.007_bb0135 article-title: Erodibility of natural sediments: experiments on sand/mud mixtures from laboratory and field erosion tests publication-title: Proceedings in Marine Science doi: 10.1016/S1568-2692(08)80013-7 – volume: 145 start-page: 9 year: 2004 ident: 10.1016/j.jembe.2015.02.007_bb9000 article-title: Vertical migratory rhythms of benthic diatoms in a tropical intertidal sand flat: influence of irradiance and tides publication-title: Mar. Biol. doi: 10.1007/s00227-004-1300-3 – volume: 65 start-page: 30 year: 2005 ident: 10.1016/j.jembe.2015.02.007_bb0125 article-title: Spatial dynamics of microphytobenthos determined by PAM fluorescence publication-title: Estuar. Coast. Shelf Sci. doi: 10.1016/j.ecss.2005.05.005 – volume: 38 start-page: 17 year: 2002 ident: 10.1016/j.jembe.2015.02.007_bb0385 article-title: Photoacclimation of photosynthesis irradiance response curves and photosynthetic pigments in microalgae and cyanobacteria publication-title: J. Phycol. doi: 10.1046/j.1529-8817.2002.00094.x – volume: 38 start-page: 917 year: 2010 ident: 10.1016/j.jembe.2015.02.007_bb0255 article-title: Biochemical characterization of extracellular polymeric substances extracted from an intertidal mudflat using a cation exchange resin publication-title: Biochem. Syst. Ecol. doi: 10.1016/j.bse.2010.09.014 – volume: 1 start-page: 11 year: 1989 ident: 10.1016/j.jembe.2015.02.007_bb0190 article-title: Tassement et rhéologie des vases, 1ère partie publication-title: La Houille Blanche doi: 10.1051/lhb/1989001 – volume: 37 start-page: 517 year: 2001 ident: 10.1016/j.jembe.2015.02.007_bb0395 article-title: Fluorescence-based maximal quantum yield for PSII as a diagnostic of nutrient stress publication-title: Journal of Phycology doi: 10.1046/j.1529-8817.2001.037004517.x – volume: 2 start-page: 75 year: 2001 ident: 10.1016/j.jembe.2015.02.007_bb0360 article-title: Cell–cell and cell–surface interactions in an illuminated biofilm: implications for marine sediment stabilization publication-title: Geochem. Trans. doi: 10.1186/1467-4866-2-75 – volume: 146 start-page: 903 year: 2005 ident: 10.1016/j.jembe.2015.02.007_bb0275 article-title: Short-term variability in the photosynthetic activity of microphytobenthos as detected by measuring rapid light curves using variable fluorescence publication-title: Mar. Biol. doi: 10.1007/s00227-004-1504-6 – volume: 24 start-page: 721 year: 2004 ident: 10.1016/j.jembe.2015.02.007_bb0080 article-title: Decomposition of diatoms and nutrient dynamics in permeable North Sea sediments publication-title: Cont. Shelf Res. doi: 10.1016/j.csr.2004.01.002 – volume: 39 start-page: 99 year: 1985 ident: 10.1016/j.jembe.2015.02.007_bb0130 article-title: The influence of bioturbation on physical, chemical and biological parameters in aquatic environments: a review publication-title: Environ. Pollut. A, Ecol. Biol. doi: 10.1016/0143-1471(85)90009-1 – volume: 6 start-page: 70 year: 2008 ident: 10.1016/j.jembe.2015.02.007_bb0090 article-title: Microalgal mediation of ripple mobility publication-title: Geobiology doi: 10.1111/j.1472-4669.2007.00108.x – volume: 23 start-page: 575 year: 2003 ident: 10.1016/j.jembe.2015.02.007_bb0245 article-title: Changes in microphytobenthic chlorophyll a and EPS resulting from sediment compaction due to de-watering: opposing patterns in concentration and content publication-title: Cont. Shelf Res. doi: 10.1016/S0278-4343(03)00006-2 – volume: 264 start-page: 85 year: 2001 ident: 10.1016/j.jembe.2015.02.007_bb0030 article-title: Dynamic behaviour of benthic microalgal biomass in intertidal mudflats publication-title: J. Exp. Mar. Biol. Ecol. doi: 10.1016/S0022-0981(01)00312-4 – volume: 39 start-page: 117 year: 2004 ident: 10.1016/j.jembe.2015.02.007_bb0045 article-title: The glucans extracted with warm water from diatoms are mainly derived from intracellular chrysolaminaran and not extracellular polysaccharides publication-title: Eur. J. Phycol. doi: 10.1080/0967026042000201885 – volume: 29 start-page: 1 year: 1996 ident: 10.1016/j.jembe.2015.02.007_bb0195 article-title: Erosion of mud/sand mixtures publication-title: Coast. Eng. doi: 10.1016/S0378-3839(96)00002-6 – volume: 458 start-page: 53 year: 2012 ident: 10.1016/j.jembe.2015.02.007_bb0220 article-title: Spatial and temporal interaction between sediment and microphytobenthos in a temperate estuarine macro-intertidal bay publication-title: Mar. Ecol. Prog. Ser. doi: 10.3354/meps09698 – volume: 32 start-page: 19 year: 1997 ident: 10.1016/j.jembe.2015.02.007_bb0390 article-title: The influence of clay on the threshold of movement of fine sandy beds publication-title: Coast. Eng. doi: 10.1016/S0378-3839(97)00013-6 – volume: 40 start-page: 776 year: 1995 ident: 10.1016/j.jembe.2015.02.007_bb0055 article-title: Wind and tide induced resuspension of sediment and microphytobenthos from tidal flats in the Ems estuary publication-title: Limnol. Oceanogr. doi: 10.4319/lo.1995.40.4.0776 – volume: 7 start-page: 25 year: 2007 ident: 10.1016/j.jembe.2015.02.007_bb0100 – volume: 34 start-page: 223 year: 1989 ident: 10.1016/j.jembe.2015.02.007_bb0240 article-title: Short-term changes in the erodibility of intertidal cohesive sediments related to the migratory behaviour of epipelic diatoms publication-title: Limnol. Oceanogr. doi: 10.4319/lo.1989.34.1.0223 – volume: 405 start-page: 120 year: 2011 ident: 10.1016/j.jembe.2015.02.007_bb0040 article-title: Physiological versus behavioral photoprotection in intertidal epipelic and epipsammic benthic diatom communities publication-title: J. Exp. Mar. Biol. Ecol. doi: 10.1016/j.jembe.2011.05.027 – volume: 55 start-page: 43 year: 2006 ident: 10.1016/j.jembe.2015.02.007_bb0380 article-title: Do benthic diatoms influence erosion thresholds of coastal subtidal sediments? publication-title: J. Sea Res. doi: 10.1016/j.seares.2005.08.002 – volume: 138 start-page: 979 year: 2012 ident: 10.1016/j.jembe.2015.02.007_bb0110 article-title: Accounting for rough bed friction factors of mud beds due to biological activity in erosion experiments publication-title: J. Hydraul. Eng. doi: 10.1061/(ASCE)HY.1943-7900.0000627 – volume: 82 start-page: 3449 year: 2001 ident: 10.1016/j.jembe.2015.02.007_bb0350 article-title: Do alternate stable states occur in natural ecosystems? Evidence from a tidal flat publication-title: Ecology doi: 10.1890/0012-9658(2001)082[3449:DASSOI]2.0.CO;2 – volume: 40 start-page: 692 year: 2004 ident: 10.1016/j.jembe.2015.02.007_bb0025 article-title: Characterizing and quantifying photoinhibition in intertidal microphytobenthos publication-title: J. Phycol. doi: 10.1111/j.1529-8817.2004.03063.x – volume: 72 start-page: 248 year: 1976 ident: 10.1016/j.jembe.2015.02.007_bb0035 article-title: A rapid and sensitive method for the quantitation of microgram quantities of protein using the principle of protein dye binding publication-title: Anal. Biochem. doi: 10.1016/0003-2697(76)90527-3 – volume: 23 start-page: 225 year: 1986 ident: 10.1016/j.jembe.2015.02.007_bb0105 article-title: The interaction between benthic diatom films and sediment transport publication-title: Estuar. Coast. Shelf Sci. doi: 10.1016/0272-7714(86)90056-9 – volume: 5 start-page: e13794 year: 2010 ident: 10.1016/j.jembe.2015.02.007_bb0170 article-title: The stabilisation potential of individual and mixed assemblages of natural bacteria and microalgae publication-title: PLoS ONE doi: 10.1371/journal.pone.0013794 – volume: 35 start-page: 116 year: 1998 ident: 10.1016/j.jembe.2015.02.007_bb0345 article-title: Predicting epipelic diatom exopolymer concentrations in intertidal sediments from sediment chlorophyll a publication-title: Microb. Ecol. doi: 10.1007/s002489900066 – volume: 43 start-page: 1578 year: 1998 ident: 10.1016/j.jembe.2015.02.007_bb0290 article-title: Exopolymer production by intertidal epipelic diatoms publication-title: Limnol. Oceanogr. doi: 10.4319/lo.1998.43.7.1578 – volume: 26 start-page: 351 year: 2006 ident: 10.1016/j.jembe.2015.02.007_bb0330 article-title: Small-scale temporal and spatial variability in the erosion threshold and properties of cohesive intertidal sediments publication-title: Cont. Shelf Res. doi: 10.1016/j.csr.2005.11.007 – volume: 50 start-page: 301 year: 2003 ident: 10.1016/j.jembe.2015.02.007_bb0175 article-title: Observations of resuspended diatoms in the turbid tidal edge publication-title: J. Sea Res. doi: 10.1016/j.seares.2003.04.001 – volume: 251 start-page: 115 year: 2003 ident: 10.1016/j.jembe.2015.02.007_bb0265 article-title: Diatom activity within soft sediments: behavorial and physiological processes publication-title: Mar. Ecol. Prog. Ser. doi: 10.3354/meps251115 – volume: 183–193 year: 2003 ident: 10.1016/j.jembe.2015.02.007_bb0335 article-title: Diatom migration and sediment armouring — an example from the Tagus Estuary, Portugal publication-title: Mar. Ecol. – volume: 5 start-page: 1 year: 2011 ident: 10.1016/j.jembe.2015.02.007_bb0185 article-title: Resistance and resilience of benthic biofilm communities from a temperate saltmarsh to desiccation and rewetting publication-title: ISME J. doi: 10.1038/ismej.2010.91 – volume: 57 start-page: 123 year: 2003 ident: 10.1016/j.jembe.2015.02.007_bb0160 article-title: Variation in sediment stability and relation to indicators of microbial abundance in the Okura Estuary, New Zealand publication-title: Estuar. Coast. Shelf Sci. doi: 10.1016/S0272-7714(02)00336-0 – volume: 40 start-page: 4 year: 2004 ident: 10.1016/j.jembe.2015.02.007_bb0020 article-title: In search of a physiological basis for covariations in light-limited and light-saturated photosynthesis publication-title: J. Phycol. doi: 10.1046/j.1529-8817.2004.03083.x – volume: 31 start-page: S135 year: 2011 ident: 10.1016/j.jembe.2015.02.007_bb0140 article-title: Dynamics of sand and mud mixtures: a multiprocess-based modelling strategy publication-title: Cont. Shelf Res. doi: 10.1016/j.csr.2010.12.009 – volume: 1–10 year: 2009 ident: 10.1016/j.jembe.2015.02.007_bb0325 article-title: Optimising extraction of extracellular polymeric substances (EPS) from benthic diatoms: comparison of the efficiency of six EPS extraction methods publication-title: Mar. Freshwat. Res. – volume: 42 start-page: 199 year: 1988 ident: 10.1016/j.jembe.2015.02.007_bb0085 article-title: A model for the relationship between light intensity and the rate of photosynthesis in phytoplankton publication-title: Ecol. Model. doi: 10.1016/0304-3800(88)90057-9 – volume: 193 start-page: 261 year: 2000 ident: 10.1016/j.jembe.2015.02.007_bb0310 article-title: Oxygenic photosynthesis as driving process in exopolysaccharide production of benthic diatoms publication-title: Mar. Ecol. Prog. Ser. doi: 10.3354/meps193261 – volume: 43 start-page: 65 year: 1998 ident: 10.1016/j.jembe.2015.02.007_bb0320 article-title: The effect of carbohydrate production by the diatom Nitzschia curvilineata on the erodibility of sediment publication-title: Limnol. Oceanogr. doi: 10.4319/lo.1998.43.1.0065 – volume: 9 start-page: 640 year: 2009 ident: 10.1016/j.jembe.2015.02.007_bb0095 article-title: Microbial assemblages as ecosystem engineers of sediment stability publication-title: J. Soils Sediments doi: 10.1007/s11368-009-0142-5 – volume: 42 start-page: 30 year: 1994 ident: 10.1016/j.jembe.2015.02.007_bb0005 article-title: The seasonal succession patterns of diatom species on an intertidal mudflat: an experimental analysis publication-title: Oikos doi: 10.2307/3544606 – volume: 39 start-page: 33 year: 2003 ident: 10.1016/j.jembe.2015.02.007_bb0270 article-title: A chlorophyll fluorescence index to estimate short-term rates of photosynthesis by intertidal microphytobenthos publication-title: J. Phycol. doi: 10.1046/j.1529-8817.2003.02043.x – volume: 49 start-page: 501 year: 2005 ident: 10.1016/j.jembe.2015.02.007_bb0050 article-title: Biogenic stabilization of intertidal sediments: the importance of extracellular polymeric substances produced by benthic diatoms publication-title: Microb. Ecol. doi: 10.1007/s00248-004-0020-z – volume: 42 start-page: 4179 year: 2008 ident: 10.1016/j.jembe.2015.02.007_bb0315 article-title: The effect of bed age and shear stress on the particle morphology of eroded cohesive river sediment in an annular flume publication-title: Water Res. doi: 10.1016/j.watres.2008.06.019 – volume: 7 start-page: 1 year: 2012 ident: 10.1016/j.jembe.2015.02.007_bb9005 article-title: Spatial variability of benthic-pelagic coupling in an estuary ecosystem: consequences for microphytobenthos resuspension phenomenon publication-title: Plos ONE doi: 10.1371/journal.pone.0044155 – volume: 59 start-page: 313 year: 2008 ident: 10.1016/j.jembe.2015.02.007_bb0300 article-title: Microalgal sediment biostabilisation along a salinity gradient in the Eden Estuary, Scotland: unravelling a paradox publication-title: Mar. Freshwat. Res. doi: 10.1071/MF07164 – volume: 56 start-page: 1801 year: 1999 ident: 10.1016/j.jembe.2015.02.007_bb0120 article-title: A simple and precise method for measuring ammonium in marine and freshwater ecosystems publication-title: Can. J. Fish. Aquat. Sci. doi: 10.1139/f99-128 – volume: 64 start-page: 577 year: 2005 ident: 10.1016/j.jembe.2015.02.007_bb0230 article-title: Biological influences on morphology and bed composition of an intertidal flat publication-title: Estuar. Coast. Shelf Sci. doi: 10.1016/j.ecss.2005.04.008 – volume: 92 start-page: 6 year: 2014 ident: 10.1016/j.jembe.2015.02.007_bb0205 article-title: Tidal and seasonal effects on the consortium of bacteria, microphytobenthos and exopolymers in natural intertidal biofilms (Brouage, France) publication-title: J. Sea Res. doi: 10.1016/j.seares.2014.02.018 – volume: 333 start-page: 321 year: 2001 ident: 10.1016/j.jembe.2015.02.007_bb0295 article-title: The production of extracellular carbohydrates by estuarine benthic diatoms: the effects of growth phase and light and dark treatment publication-title: J. Phycol. doi: 10.1046/j.1529-8817.2000.99148.x – volume: 27 start-page: 1116 year: 2007 ident: 10.1016/j.jembe.2015.02.007_bb0145 article-title: Sediment erodability in sediment transport modelling: can we account for biota effects? publication-title: Cont. Shelf Res. doi: 10.1016/j.csr.2005.11.016 – volume: 45 start-page: 237 year: 2003 ident: 10.1016/j.jembe.2015.02.007_bb0210 article-title: Carbohydrate production in relation to microphytobenthic biofilm development: an integrated approach in a tidal mesocosm publication-title: Microb. Ecol. doi: 10.1007/s00248-002-2027-7 – volume: 61–70 year: 2003 ident: 10.1016/j.jembe.2015.02.007_bb0065 – volume: 249 start-page: 13 year: 2000 ident: 10.1016/j.jembe.2015.02.007_bb0305 article-title: Exopolysaccharide production by the epipelic diatom Cylindrotheca closterium: effects of nutrient conditions publication-title: J. Exp. Mar. Biol. Ecol. doi: 10.1016/S0022-0981(00)00166-0 – year: 2008 ident: 10.1016/j.jembe.2015.02.007_bb0355 article-title: Sediment and ecohydraulics – year: 2005 ident: 10.1016/j.jembe.2015.02.007_bb0200 – volume: 28 start-page: 1363 year: 2008 ident: 10.1016/j.jembe.2015.02.007_bb0285 article-title: Photosynthetic activity, photoprotection and photoinhibition in intertidal microphytobenthos as studied in situ using variable chlorophyll fluorescence publication-title: Cont. Shelf Res. doi: 10.1016/j.csr.2008.03.019 – volume: 39 start-page: 116 year: 2000 ident: 10.1016/j.jembe.2015.02.007_bb0370 article-title: Interrelationships between rates of microbial production, exopolymer production, microbial biomass, and sediment stability in biofilms of intertidal sediments publication-title: Microb. Ecol. doi: 10.1007/s002489900186 |
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Title | Impact of sediment grain-size and biofilm age on epipelic microphytobenthos resuspension |
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