Anaerobic ammonium oxidation in agricultural soils-synthesis and prospective

Denitrification is considered as the dominant nitrogen (N) removing pathway, however, anaerobic oxidation of ammonium (anammox) also plays a significant part in N loss in agricultural ecosystems. Large N inputs into agricultural soils may stimulate the growth of anammox bacteria, resulting in high a...

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Published inEnvironmental pollution (1987) Vol. 244; pp. 127 - 134
Main Authors Nie, San'an, Zhu, Gui-Bing, Singh, Brajesh, Zhu, Yong-Guan
Format Journal Article
LanguageEnglish
Published England Elsevier Ltd 01.01.2019
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Abstract Denitrification is considered as the dominant nitrogen (N) removing pathway, however, anaerobic oxidation of ammonium (anammox) also plays a significant part in N loss in agricultural ecosystems. Large N inputs into agricultural soils may stimulate the growth of anammox bacteria, resulting in high activity and diversity of anammox bacteria and subsequent more N loss. In some specific niches, like oxic-anoxic interface, three processes, nitrification, anammox and denitrification couple with each other, and significant anammox reaction could be observed. Soil parameters like pH, dissolved oxygen, salinity, oxidation-reduction potential (ORP), and substrate concentrations impact the anammox process. Here we summarize the current knowledge on anammox activity and contribution to N loss, abundance and diversity of anammox bacteria, factors affecting anammox, and the relationship between anammox and other N loss pathways in agricultural soils. We propose that more investigations are required for (1) the role of anammox to N loss with different agricultural management strategies; (2) microscale research on the coupling of nitrification-anammox-denitrification, that might be a very complex process but ideal model for further studies responsible for N cycling in terrestrial ecosystems; and (3) new methods to estimate differential contributions of anammox, codenitrification and denitrification in total N loss in agricultural ecosystems. New research will provide much needed information to quantify the contribution of anammox in N loss from soils at landscape, ecosystem and global scales. [Display omitted] •About 5–10% of the applied fertilizers was lost by anammox in agricultural soils.•Terrestrial soils possess a high diversity and abundance of anammox bacteria.•The oxic/anoxic interfaces in the agricultural soil are hotspots for anammox.•The redox gradient area is the main coupling nitrification-anammox-denitrification.•Anammox, codenitrification and denitrification need further estimation.
AbstractList Denitrification is considered as the dominant nitrogen (N) removing pathway, however, anaerobic oxidation of ammonium (anammox) also plays a significant part in N loss in agricultural ecosystems. Large N inputs into agricultural soils may stimulate the growth of anammox bacteria, resulting in high activity and diversity of anammox bacteria and subsequent more N loss. In some specific niches, like oxic-anoxic interface, three processes, nitrification, anammox and denitrification couple with each other, and significant anammox reaction could be observed. Soil parameters like pH, dissolved oxygen, salinity, oxidation-reduction potential (ORP), and substrate concentrations impact the anammox process. Here we summarize the current knowledge on anammox activity and contribution to N loss, abundance and diversity of anammox bacteria, factors affecting anammox, and the relationship between anammox and other N loss pathways in agricultural soils. We propose that more investigations are required for (1) the role of anammox to N loss with different agricultural management strategies; (2) microscale research on the coupling of nitrification-anammox-denitrification, that might be a very complex process but ideal model for further studies responsible for N cycling in terrestrial ecosystems; and (3) new methods to estimate differential contributions of anammox, codenitrification and denitrification in total N loss in agricultural ecosystems. New research will provide much needed information to quantify the contribution of anammox in N loss from soils at landscape, ecosystem and global scales.
Denitrification is considered as the dominant nitrogen (N) removing pathway, however, anaerobic oxidation of ammonium (anammox) also plays a significant part in N loss in agricultural ecosystems. Large N inputs into agricultural soils may stimulate the growth of anammox bacteria, resulting in high activity and diversity of anammox bacteria and subsequent more N loss. In some specific niches, like oxic-anoxic interface, three processes, nitrification, anammox and denitrification couple with each other, and significant anammox reaction could be observed. Soil parameters like pH, dissolved oxygen, salinity, oxidation-reduction potential (ORP), and substrate concentrations impact the anammox process. Here we summarize the current knowledge on anammox activity and contribution to N loss, abundance and diversity of anammox bacteria, factors affecting anammox, and the relationship between anammox and other N loss pathways in agricultural soils. We propose that more investigations are required for (1) the role of anammox to N loss with different agricultural management strategies; (2) microscale research on the coupling of nitrification-anammox-denitrification, that might be a very complex process but ideal model for further studies responsible for N cycling in terrestrial ecosystems; and (3) new methods to estimate differential contributions of anammox, codenitrification and denitrification in total N loss in agricultural ecosystems. New research will provide much needed information to quantify the contribution of anammox in N loss from soils at landscape, ecosystem and global scales. [Display omitted] •About 5–10% of the applied fertilizers was lost by anammox in agricultural soils.•Terrestrial soils possess a high diversity and abundance of anammox bacteria.•The oxic/anoxic interfaces in the agricultural soil are hotspots for anammox.•The redox gradient area is the main coupling nitrification-anammox-denitrification.•Anammox, codenitrification and denitrification need further estimation.
Author Zhu, Yong-Guan
Zhu, Gui-Bing
Nie, San'an
Singh, Brajesh
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Cites_doi 10.1371/journal.pone.0029299
10.1038/ngeo1683
10.1042/BST20110707
10.1007/s00253-003-1422-4
10.1021/acs.est.6b01765
10.1128/AEM.68.3.1312-1318.2002
10.1128/AEM.02402-10
10.1016/j.geoderma.2016.11.007
10.1007/s002530051340
10.1007/s12237-008-9131-y
10.1038/nature01472
10.1007/s00253-013-5399-3
10.1264/jsme2.22.232
10.1111/j.1747-0765.2007.00195.x
10.1016/j.soilbio.2016.05.015
10.1007/s00253-012-4036-x
10.1007/BF00002772
10.1038/srep17306
10.1021/es900107w
10.1128/AEM.02379-14
10.1126/science.1182570
10.1016/j.watres.2013.01.023
10.1111/j.1574-6968.2012.02654.x
10.1128/AEM.00884-13
10.1016/j.biortech.2007.11.052
10.1042/BST20110711
10.1128/AEM.63.6.2446-2448.1997
10.1007/s11368-015-1131-5
10.1007/s00253-011-3411-3
10.1007/s00253-010-2451-4
10.1099/13500872-142-8-2187
10.1016/j.soilbio.2015.08.040
10.1038/nature10453
10.1038/ismej.2015.25
10.1146/annurev-ecolsys-102710-145048
10.1128/AEM.02520-12
10.1890/0012-9658(2001)082[2410:DNRTAI]2.0.CO;2
10.1128/AEM.00888-16
10.1007/s11368-013-0650-1
10.1128/AEM.02664-14
10.1007/s00253-017-8404-4
10.1016/j.syapm.2006.03.004
10.1111/1758-2229.12341
10.1021/es801175t
10.1007/s11104-009-9895-2
10.4319/lo.2012.57.5.1331
10.1128/AEM.71.2.1066-1071.2005
10.1007/s00374-018-1263-z
10.1016/j.soilbio.2010.08.021
10.1111/j.1574-6941.1995.tb00281.x
10.1016/j.cosust.2012.08.003
10.1038/ismej.2011.63
10.1128/AEM.69.11.6447-6454.2003
10.1111/j.1462-2920.2006.01183.x
10.1016/S1001-0742(13)60531-8
10.1021/es3017446
10.1016/S0958-1669(00)00211-1
10.1038/ismej.2009.125
10.1007/s10533-014-0066-z
10.1073/pnas.0502088102
10.1128/AEM.71.4.1677-1684.2005
10.1264/jsme2.ME11330
10.1016/j.biortech.2008.11.055
10.1016/j.apsoil.2017.02.005
10.1016/S0065-2113(07)96003-4
10.1111/j.1574-6941.2007.00408.x
10.1007/s11104-008-9774-2
10.1021/es503113s
10.1002/jpln.201000200
10.1038/nature04647
10.1023/A:1009650720124
10.1111/j.1462-2920.2006.01074.x
10.1007/s00253-015-6454-z
10.1016/j.scitotenv.2017.04.240
10.1128/.61.4.533-616.1997
10.1080/00380768.1988.10415701
10.1111/j.1462-2920.2008.01640.x
10.1016/S0168-6445(00)00054-1
10.1111/j.1462-2920.2008.01850.x
10.1007/s11104-011-0720-3
10.1111/1462-2920.14098
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Keywords Rhizosphere
Anammox
N loss
Agricultural soils
Oxic/anoxic interface
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References Kartal, Maalcke, de Almeida, Cirpus, Gloerich, Geerts, den Camp, Harhangi, Janssen-Megens, Francoijs, Stunnenberg, Keltjens, Jetten, Strous (bib31) 2011; 479
Yang, Li, Nie, Su, Weng, Zhu, Yao, Gilbert, Zhu (bib76) 2015; 81
Jetten, Sliekers, Kuypers, Dalsgaard, van Niftrik, Cirpus, van de Pas-Schoonen, Lavik, Thamdrup, Le Paslier, Op den Camp, Hulth, Nielsen, Abma, Third, Engstrom, Kuenen, Jorgensen, Canfield, Damste, Revsbech, Fuerst, Weissenbach, Wagner, Schmidt, Schmid, Strous (bib24) 2003; 63
Strous, Van Gerven, Kuenen, Jetten (bib62) 1997; 63
Hu, Rush, van der Biezen, Zheng, van Mullekom, Schouten, Damste, Smolders, Jetten, Kartal (bib17) 2011; 77
Gu, Zhou, Zhang, Zhao, Di, Liang (bib13) 2017; 599
Wang, Zhu, Peng, Jetten, Yin (bib69) 2012; 46
Zumft (bib87) 1997; 61
Kartal, Kuypers, Lavik, Schalk, den Camp, Jetten, Strous (bib30) 2007; 9
Philippot, Hallin, Schloter (bib45) 2007; 96
Zhu, Wang, Wang, Wang, Risgaard-Petersen, Jetten, Yin (bib82) 2011; 5
Kartal, Rattray, van Niftrik, van de Vossenberg, Schmid, Webb, Schouten, Fuerst, Damste, Jetten, Strous (bib32) 2007; 30
Zhu, Jetten, Kuschk, Ettwig, Yin (bib80) 2010; 86
Brune, Frenzel, Cypionka (bib4) 2000; 24
Furukawa, Inatomi, Qiao, Quan, Yamamoto, Isaka, Sumino (bib9) 2009; 100
Gori, Tringe, Kartal, Marchiori, Jetten (bib12) 2011; 39
Koop-Jakobsen, Giblin (bib34) 2009; 32
Kuypers, Lavik, Woebken, Schmid, Fuchs, Amann, Jorgensen, Jetten (bib35) 2005; 102
Mulder, van de Graaf, Robertson, Kuenen (bib42) 1995; 16
Erler, Eyre, Davison (bib8) 2008; 42
Hu, Shen, Xu, Zheng (bib18) 2011; 39
Jetten, Strous, van de Pas-Schoonen, Schalk, van Dongen, van de Graaf, Logemann, Muyzer, van Loosdrecht, Kuenen (bib25) 1998; 22
Lynch, Whipps (bib40) 1991
Humbert, Tarnawski, Fromin, Mallet, Aragno, Zopfi (bib21) 2010; 4
Wang, Zhu, Harhangi, Zhu, Jetten, Yin, Op den Camp (bib70) 2012; 336
Kuypers, Sliekers, Lavik, Schmid, Jorgensen, Kuenen, Damste, Strous, Jetten (bib36) 2003; 422
Thamdrup, Dalsgaard (bib64) 2002; 68
Van de Graaf, de Bruijn, Robertson, Jetten, Kuenen (bib66) 1996; 142
Jackson, Bowles, Hodson, Lazcano (bib22) 2012; 4
Strous, Pelletier, Mangenot, Rattei, Lehner, Taylor, Horn, Daims, Bartol-Mavel, Wincker, Barbe, Fonknechten, Vallenet, Segurens, Schenowitz-Truong, Medigue, Collingro, Snel, Dutilh, Op den Camp, van der Drift, Cirpus, van de Pas-Schoonen, Harhangi, van Niftrik, Schmid, Keltjens, van de Vossenberg, Kartal, Meier, Frishman, Huynen, Mewes, Weissenbach, Jetten, Wagner, Le Paslier (bib61) 2006; 440
Maier (bib41) 1998; 3
Dale, Tobias, Song (bib5) 2009; 11
Xu, Xu, Cai, Reverchon (bib74) 2013; 13
Youssef, Chino (bib77) 1988; 34
Bai, Xi, He, Hu, Fang, Zhang (bib3) 2015; 91
Kartal, van Niftrik, Rattray, de Vossenberg, Schmid, Damste, Jetten, Strous (bib33) 2008; 63
Zhu, Wang, Zhou, Wang, Zhao, Xia, Wang, Zhou, Wang, Jetten, Hefting, Yin, Qu (bib83) 2015; 5
Shen, Wu, Liu, Li (bib56) 2017; 288
Woebken, Lam, Kuypers, Naqvi, Kartal, Strous, Jetten, Fuchs, Amann (bib72) 2008; 10
Hayatsu, Tago, Saito (bib16) 2008; 54
Shan, Yang, Shang, Rahman, Yan (bib51) 2018; 54
Silver, Herman, Firestone (bib57) 2001; 82
Xi, Bai, Zhang, Fang (bib73) 2016; 82
Zhu, Zhang, Cai (bib85) 2011; 343
Shan, Zhao, Sheng, Xia, Ti, Quan, Wang, Wei, Yan (bib52) 2016; 50
Hui, Guo, Sun, Lin, Zhang, Liang, Zhao (bib20) 2017; 113
Jetten, Wagner, Fuerst, van Loosdrecht, Kuenen, Strous (bib26) 2001; 12
Guven, Dapena, Kartal, Schmid, Maas, van de Pas-Schoonen, Sozen, Mendez, Op den Camp, Jetten, Strous, Schmidt (bib15) 2005; 71
Long, Heitman, Tobias, Philips, Song (bib39) 2013; 79
Zhu, Xia, Shanyun, Zhou, Liu, Zhao (bib84) 2015; 7
Zhou, Zhang, Gu, Jabeen, Li, Di (bib78) 2017; 101
Nie, Li, Yang, Zhang, Weng, Huang, Zhu, Zhu (bib44) 2015; 9
Ding, An, Li, Zhang, Zhu (bib7) 2014; 48
Naeher, Huguet, Roose-Amsaleg, Laverman, Fosse, Lehmann, Derenne, Zopfi (bib43) 2015; 123
Schubert, Durisch-Kaiser, Wehrli, Thamdrup, Lam, Kuypers (bib50) 2006; 8
Jetten, Camp, Kuenen, Strous (bib23) 2010
Huang, Gao, Peng, Tao (bib19) 2014
Pitman, Läuchli (bib46) 2002
Wang, Gu (bib71) 2014; 98
Yamamoto, Takaki, Koyama, Furukawa (bib75) 2008; 99
Joss, Salzgeber, Eugster, Konig, Rottermann, Burger, Fabijan, Leumann, Mohn, Siegrist (bib28) 2009; 43
Schmid, Maas, Dapena, de Pas-Schoonen, de Vossenberg, Kartal, van Niftrik, Schmidt, Cirpus, Kuenen, Wagner, Damste, Kuypers, Revsbech, Mendez, Jetten, Strous (bib49) 2005; 71
Amano, Yoshinaga, Okada, Yamagishi, Ueda, Obuchi, Sako, Suwa (bib1) 2007; 22
Zhu (bib86) 2008; 45
Kalvelage, Jensen, Contreras, Revsbech, Lam, Gunter, LaRoche, Lavik, Kuypers (bib29) 2011; 6
Vitousek, Howarth (bib67) 1991; 13
Jones, Hinsinger (bib27) 2008; 312
Li, Yang, Weng, Su, Nie, Gilbert, Zhu (bib38) 2016; 100
Zhu, Wang, Wang, Wang, Zhou, Jiang, Op den Camp, Risgaard-Petersen, Schwark, Peng, Hefting, Jetten, Yin (bib81) 2013; 6
Zhu, Wang, Li, Zhuang, Zhao, Wang, Kuypers, Jetten, Zhu (bib79) 2018; 20
Dalsgaard, Thamdrup, Farias, Revsbech (bib6) 2012; 57
Gao, Tao (bib10) 2011; 91
Spott, Stange (bib59) 2011; 174
Trimmer, Nicholls, Deflandre (bib65) 2003; 69
Sims, Zhang, Gajaraj, Brown, Hu (bib58) 2013; 47
Geisseler, Horwath, Joergensen, Ludwig (bib11) 2010; 42
Guo, Liu, Zhang, Shen, Han, Zhang, Christie, Goulding, Vitousek, Zhang (bib14) 2010; 327
Bai, Chen, He, Shen, Zhang (bib2) 2015; 15
Thamdrup (bib63) 2012; 43
Sato, Ohta, Yamagishi, Guo, Nishizawa, Rahman, Kuroda, Kato, Saito, Yoshinaga, Inubushi, Suwa (bib48) 2012; 27
Strous, Heijnen, Kuenen, Jetten (bib60) 1998; 50
Shen, Liu, Huang, Lian, He, Geng, Jin, He, Lou, Xu, Zheng, Hu (bib53) 2014; 80
Richardson, Barea, McNeill, Prigent-Combaret (bib47) 2009; 321
Shen, Liu, Lou, Liu, Xu, Zheng, Hu (bib54) 2013; 79
Shen, Wu, Gao, Xu, Chen, Liu, Cheng (bib55) 2015; 99
Wang, Gu (bib68) 2013; 97
Ding (10.1016/j.envpol.2018.10.050_bib7) 2014; 48
Hayatsu (10.1016/j.envpol.2018.10.050_bib16) 2008; 54
Jones (10.1016/j.envpol.2018.10.050_bib27) 2008; 312
Wang (10.1016/j.envpol.2018.10.050_bib71) 2014; 98
Spott (10.1016/j.envpol.2018.10.050_bib59) 2011; 174
Zhu (10.1016/j.envpol.2018.10.050_bib86) 2008; 45
Strous (10.1016/j.envpol.2018.10.050_bib60) 1998; 50
Lynch (10.1016/j.envpol.2018.10.050_bib40) 1991
Li (10.1016/j.envpol.2018.10.050_bib38) 2016; 100
Pitman (10.1016/j.envpol.2018.10.050_bib46) 2002
Jetten (10.1016/j.envpol.2018.10.050_bib25) 1998; 22
Jackson (10.1016/j.envpol.2018.10.050_bib22) 2012; 4
Bai (10.1016/j.envpol.2018.10.050_bib3) 2015; 91
Nie (10.1016/j.envpol.2018.10.050_bib44) 2015; 9
Thamdrup (10.1016/j.envpol.2018.10.050_bib63) 2012; 43
Trimmer (10.1016/j.envpol.2018.10.050_bib65) 2003; 69
Zhu (10.1016/j.envpol.2018.10.050_bib84) 2015; 7
Naeher (10.1016/j.envpol.2018.10.050_bib43) 2015; 123
Strous (10.1016/j.envpol.2018.10.050_bib61) 2006; 440
Woebken (10.1016/j.envpol.2018.10.050_bib72) 2008; 10
Van de Graaf (10.1016/j.envpol.2018.10.050_bib66) 1996; 142
Youssef (10.1016/j.envpol.2018.10.050_bib77) 1988; 34
Yang (10.1016/j.envpol.2018.10.050_bib76) 2015; 81
Philippot (10.1016/j.envpol.2018.10.050_bib45) 2007; 96
Vitousek (10.1016/j.envpol.2018.10.050_bib67) 1991; 13
Zumft (10.1016/j.envpol.2018.10.050_bib87) 1997; 61
Jetten (10.1016/j.envpol.2018.10.050_bib23) 2010
Maier (10.1016/j.envpol.2018.10.050_bib41) 1998; 3
Gao (10.1016/j.envpol.2018.10.050_bib10) 2011; 91
Wang (10.1016/j.envpol.2018.10.050_bib68) 2013; 97
Xu (10.1016/j.envpol.2018.10.050_bib74) 2013; 13
Koop-Jakobsen (10.1016/j.envpol.2018.10.050_bib34) 2009; 32
Humbert (10.1016/j.envpol.2018.10.050_bib21) 2010; 4
Bai (10.1016/j.envpol.2018.10.050_bib2) 2015; 15
Dalsgaard (10.1016/j.envpol.2018.10.050_bib6) 2012; 57
Kuypers (10.1016/j.envpol.2018.10.050_bib36) 2003; 422
Richardson (10.1016/j.envpol.2018.10.050_bib47) 2009; 321
Wang (10.1016/j.envpol.2018.10.050_bib69) 2012; 46
Schubert (10.1016/j.envpol.2018.10.050_bib50) 2006; 8
Shen (10.1016/j.envpol.2018.10.050_bib54) 2013; 79
Strous (10.1016/j.envpol.2018.10.050_bib62) 1997; 63
Shen (10.1016/j.envpol.2018.10.050_bib56) 2017; 288
Guven (10.1016/j.envpol.2018.10.050_bib15) 2005; 71
Zhu (10.1016/j.envpol.2018.10.050_bib79) 2018; 20
Hui (10.1016/j.envpol.2018.10.050_bib20) 2017; 113
Shen (10.1016/j.envpol.2018.10.050_bib53) 2014; 80
Zhu (10.1016/j.envpol.2018.10.050_bib80) 2010; 86
Shen (10.1016/j.envpol.2018.10.050_bib55) 2015; 99
Kuypers (10.1016/j.envpol.2018.10.050_bib35) 2005; 102
Erler (10.1016/j.envpol.2018.10.050_bib8) 2008; 42
Sims (10.1016/j.envpol.2018.10.050_bib58) 2013; 47
Zhou (10.1016/j.envpol.2018.10.050_bib78) 2017; 101
Thamdrup (10.1016/j.envpol.2018.10.050_bib64) 2002; 68
Hu (10.1016/j.envpol.2018.10.050_bib17) 2011; 77
Dale (10.1016/j.envpol.2018.10.050_bib5) 2009; 11
Gori (10.1016/j.envpol.2018.10.050_bib12) 2011; 39
Gu (10.1016/j.envpol.2018.10.050_bib13) 2017; 599
Guo (10.1016/j.envpol.2018.10.050_bib14) 2010; 327
Shan (10.1016/j.envpol.2018.10.050_bib52) 2016; 50
Shan (10.1016/j.envpol.2018.10.050_bib51) 2018; 54
Wang (10.1016/j.envpol.2018.10.050_bib70) 2012; 336
Furukawa (10.1016/j.envpol.2018.10.050_bib9) 2009; 100
Geisseler (10.1016/j.envpol.2018.10.050_bib11) 2010; 42
Silver (10.1016/j.envpol.2018.10.050_bib57) 2001; 82
Brune (10.1016/j.envpol.2018.10.050_bib4) 2000; 24
Zhu (10.1016/j.envpol.2018.10.050_bib81) 2013; 6
Schmid (10.1016/j.envpol.2018.10.050_bib49) 2005; 71
Huang (10.1016/j.envpol.2018.10.050_bib19) 2014
Xi (10.1016/j.envpol.2018.10.050_bib73) 2016; 82
Mulder (10.1016/j.envpol.2018.10.050_bib42) 1995; 16
Joss (10.1016/j.envpol.2018.10.050_bib28) 2009; 43
Kartal (10.1016/j.envpol.2018.10.050_bib33) 2008; 63
Yamamoto (10.1016/j.envpol.2018.10.050_bib75) 2008; 99
Jetten (10.1016/j.envpol.2018.10.050_bib26) 2001; 12
Kartal (10.1016/j.envpol.2018.10.050_bib30) 2007; 9
Zhu (10.1016/j.envpol.2018.10.050_bib85) 2011; 343
Zhu (10.1016/j.envpol.2018.10.050_bib82) 2011; 5
Kartal (10.1016/j.envpol.2018.10.050_bib32) 2007; 30
Jetten (10.1016/j.envpol.2018.10.050_bib24) 2003; 63
Kalvelage (10.1016/j.envpol.2018.10.050_bib29) 2011; 6
Kartal (10.1016/j.envpol.2018.10.050_bib31) 2011; 479
Sato (10.1016/j.envpol.2018.10.050_bib48) 2012; 27
Zhu (10.1016/j.envpol.2018.10.050_bib83) 2015; 5
Amano (10.1016/j.envpol.2018.10.050_bib1) 2007; 22
Hu (10.1016/j.envpol.2018.10.050_bib18) 2011; 39
Long (10.1016/j.envpol.2018.10.050_bib39) 2013; 79
References_xml – volume: 24
  start-page: 691
  year: 2000
  end-page: 710
  ident: bib4
  article-title: Life at the oxic–anoxic interface: microbial activities and adaptations
  publication-title: FEMS Microbiol. Rev.
  contributor:
    fullname: Cypionka
– volume: 54
  start-page: 33
  year: 2008
  end-page: 45
  ident: bib16
  article-title: Various players in the nitrogen cycle: diversity and functions of the microorganisms involved in nitrification and denitrification
  publication-title: Soil Sci. Plant Nutr.
  contributor:
    fullname: Saito
– volume: 43
  start-page: 407
  year: 2012
  end-page: 428
  ident: bib63
  article-title: New pathways and processes in the global nitrogen cycle
  publication-title: Annu. Rev. Ecol. Evol. Syst.
  contributor:
    fullname: Thamdrup
– volume: 15
  start-page: 1977
  year: 2015
  end-page: 1986
  ident: bib2
  article-title: Candidatus Brocadia and Candidatus Kuenenia predominated in anammox bacterial community in selected Chinese paddy soils
  publication-title: J. Soils Sediments
  contributor:
    fullname: Zhang
– volume: 100
  start-page: 5437
  year: 2009
  end-page: 5443
  ident: bib9
  article-title: Innovative treatment system for digester liquor using anammox process
  publication-title: Bioresour. Technol.
  contributor:
    fullname: Sumino
– volume: 77
  start-page: 966
  year: 2011
  end-page: 971
  ident: bib17
  article-title: New anaerobic, ammonium-oxidizing community enriched from peat soil
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Kartal
– volume: 27
  start-page: 316
  year: 2012
  end-page: 319
  ident: bib48
  article-title: Detection of anammox activity and 16S rRNA genes in ravine paddy field soil
  publication-title: Microb. Environ.
  contributor:
    fullname: Suwa
– start-page: 15
  year: 1991
  end-page: 24
  ident: bib40
  article-title: Substrate Flow in the Rhizosphere, the Rhizosphere and Plant Growth
  contributor:
    fullname: Whipps
– volume: 9
  start-page: 635
  year: 2007
  end-page: 642
  ident: bib30
  article-title: Anammox bacteria disguised as denitrifiers: nitrate reduction to dinitrogen gas via nitrite and ammonium
  publication-title: Environ. Microbiol.
  contributor:
    fullname: Strous
– volume: 32
  start-page: 238
  year: 2009
  end-page: 245
  ident: bib34
  article-title: Anammox in tidal marsh sediments: the role of salinity, nitrogen loading, and marsh vegetation
  publication-title: Estuar. Coast
  contributor:
    fullname: Giblin
– volume: 22
  start-page: 421
  year: 1998
  end-page: 437
  ident: bib25
  article-title: The anaerobic oxidation of ammonium
  publication-title: FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Rev.
  contributor:
    fullname: Kuenen
– volume: 5
  start-page: 1905
  year: 2011
  end-page: 1912
  ident: bib82
  article-title: Anaerobic ammonia oxidation in a fertilized paddy soil
  publication-title: ISME J.
  contributor:
    fullname: Yin
– volume: 321
  start-page: 305
  year: 2009
  end-page: 339
  ident: bib47
  article-title: Acquisition of phosphorus and nitrogen in the rhizosphere and plant growth promotion by microorganisms
  publication-title: Plant Soil
  contributor:
    fullname: Prigent-Combaret
– start-page: 1034
  year: 2014
  end-page: 1039
  ident: bib19
  article-title: Effects of ferrous and manganese ions on anammox process in sequencing batch biofilm reactors
  publication-title: J. Environ. Sci.
  contributor:
    fullname: Tao
– volume: 61
  start-page: 533
  year: 1997
  end-page: 616
  ident: bib87
  article-title: Cell biology and molecular basis of denitrification
  publication-title: Microbiol. Mol. Biol. Rev.: MMBR
  contributor:
    fullname: Zumft
– volume: 11
  start-page: 1194
  year: 2009
  end-page: 1207
  ident: bib5
  article-title: Biogeographical distribution of diverse anaerobic ammonium oxidizing (anammox) bacteria in Cape Fear River Estuary
  publication-title: Environ. Microbiol.
  contributor:
    fullname: Song
– volume: 113
  start-page: 117
  year: 2017
  end-page: 126
  ident: bib20
  article-title: Depth-specific distribution and diversity of nitrite-dependent anaerobic ammonium and methane-oxidizing bacteria in upland-cropping soil under different fertilizer treatments
  publication-title: Appl. Soil Ecol.
  contributor:
    fullname: Zhao
– volume: 63
  start-page: 46
  year: 2008
  end-page: 55
  ident: bib33
  article-title: Candidatus 'Brocadia fulgida': an autofluorescent anaerobic ammonium oxidizing bacterium
  publication-title: FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Ecol.
  contributor:
    fullname: Strous
– volume: 100
  start-page: 59
  year: 2016
  end-page: 65
  ident: bib38
  article-title: The phenological stage of rice growth determines anaerobic ammonium oxidation activity in rhizosphere soil
  publication-title: Soil Biol. Biochem.
  contributor:
    fullname: Zhu
– volume: 6
  year: 2011
  ident: bib29
  article-title: Oxygen sensitivity of anammox and coupled N-cycle processes in oxygen minimum zones
  publication-title: PloS One
  contributor:
    fullname: Kuypers
– volume: 288
  start-page: 56
  year: 2017
  end-page: 63
  ident: bib56
  article-title: Vertical distribution and activity of anaerobic ammonium-oxidising bacteria in a vegetable field
  publication-title: Geoderma
  contributor:
    fullname: Li
– volume: 8
  start-page: 1857
  year: 2006
  end-page: 1863
  ident: bib50
  article-title: Anaerobic ammonium oxidation in a tropical freshwater system (Lake Tanganyika)
  publication-title: Environ. Microbiol.
  contributor:
    fullname: Kuypers
– volume: 54
  start-page: 341
  year: 2018
  end-page: 348
  ident: bib51
  article-title: Anaerobic ammonium oxidation and denitrification in a paddy soil as affected by temperature, pH, organic carbon, and substrates
  publication-title: Biol. Fertil. Soils
  contributor:
    fullname: Yan
– volume: 42
  start-page: 2058
  year: 2010
  end-page: 2067
  ident: bib11
  article-title: Pathways of nitrogen utilization by soil microorganisms - a review
  publication-title: Soil Biol. Biochem.
  contributor:
    fullname: Ludwig
– volume: 82
  start-page: 4602
  year: 2016
  end-page: 4612
  ident: bib73
  article-title: Contribution of anammox to nitrogen removal in two temperate forest soils
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Fang
– volume: 12
  start-page: 283
  year: 2001
  end-page: 288
  ident: bib26
  article-title: Microbiology and application of the anaerobic ammonium oxidation (‘anammox’) process
  publication-title: Curr. Opin. Biotechnol.
  contributor:
    fullname: Strous
– volume: 45
  start-page: 778
  year: 2008
  end-page: 783
  ident: bib86
  article-title: Research on soil nitrogen in China
  publication-title: Acta Pedol. Sin.
  contributor:
    fullname: Zhu
– volume: 6
  start-page: 103
  year: 2013
  end-page: 107
  ident: bib81
  article-title: Hotspots of anaerobic ammonium oxidation at land-freshwater interfaces
  publication-title: Nat. Geosci.
  contributor:
    fullname: Yin
– volume: 57
  start-page: 1331
  year: 2012
  end-page: 1346
  ident: bib6
  article-title: Anammox and denitrification in the oxygen minimum zone of the eastern South Pacific
  publication-title: Limnol. Oceanogr.
  contributor:
    fullname: Revsbech
– volume: 101
  start-page: 6659
  year: 2017
  end-page: 6669
  ident: bib78
  article-title: Soil anammox community structure in different land use soils treatment with C-13 urea as determined by analysis of phospholipid fatty acids
  publication-title: Appl. Microbiol. Biotechnol.
  contributor:
    fullname: Di
– volume: 10
  start-page: 3106
  year: 2008
  end-page: 3119
  ident: bib72
  article-title: A microdiversity study of anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones
  publication-title: Environ. Microbiol.
  contributor:
    fullname: Amann
– volume: 79
  start-page: 168
  year: 2013
  end-page: 176
  ident: bib39
  article-title: Co-occurring anammox, denitrification, and codenitrification in agricultural soils
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Song
– volume: 80
  start-page: 7611
  year: 2014
  end-page: 7619
  ident: bib53
  article-title: Evidence for the Co-occurrence of nitrite-dependent anaerobic ammonium and methane oxidation processes in a flooded paddy field
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Hu
– volume: 63
  start-page: 2446
  year: 1997
  end-page: 2448
  ident: bib62
  article-title: Effects of aerobic and microaerobic conditions on anaerobic ammonium-oxidizing (anammox) sludge
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Jetten
– volume: 43
  start-page: 5301
  year: 2009
  end-page: 5306
  ident: bib28
  article-title: Full-scale nitrogen removal from digester liquid with partial nitritation and anammox in one SBR
  publication-title: Environ. Sci. Technol.
  contributor:
    fullname: Siegrist
– volume: 71
  start-page: 1677
  year: 2005
  end-page: 1684
  ident: bib49
  article-title: Biomarkers for in situ detection of anaerobic ammonium-oxidizing (anammox) bacteria
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Strous
– volume: 39
  start-page: 1811
  year: 2011
  end-page: 1816
  ident: bib18
  article-title: Anaerobic ammonium oxidation (anammox) in different natural ecosystems
  publication-title: Biochem. Soc. Trans.
  contributor:
    fullname: Zheng
– volume: 7
  start-page: 961
  year: 2015
  end-page: 969
  ident: bib84
  article-title: Occurrence, activity and contribution of anammox in some freshwater extreme environments
  publication-title: Environ. Microbiol. Rep.
  contributor:
    fullname: Zhao
– volume: 63
  start-page: 107
  year: 2003
  end-page: 114
  ident: bib24
  article-title: Anaerobic ammonium oxidation by marine and freshwater planctomycete-like bacteria
  publication-title: Appl. Microbiol. Biotechnol.
  contributor:
    fullname: Strous
– volume: 9
  start-page: 2059
  year: 2015
  end-page: 2067
  ident: bib44
  article-title: Nitrogen loss by anaerobic oxidation of ammonium in rice rhizosphere
  publication-title: ISME J.
  contributor:
    fullname: Zhu
– volume: 30
  start-page: 39
  year: 2007
  end-page: 49
  ident: bib32
  article-title: Candidatus “Anammoxoglobus propionicus” a new propionate oxidizing species of anaerobic ammonium oxidizing bacteria
  publication-title: Syst. Appl. Microbiol.
  contributor:
    fullname: Strous
– volume: 98
  start-page: 3257
  year: 2014
  end-page: 3274
  ident: bib71
  article-title: Effects of allylthiourea, salinity, and pH on ammonia/ammonium-oxidizing prokaryotes in mangrove sediment incubated in laboratory microcosms
  publication-title: Appl. Microbiol. Biotechnol.
  contributor:
    fullname: Gu
– volume: 48
  start-page: 10641
  year: 2014
  end-page: 10647
  ident: bib7
  article-title: Nitrogen loss through anaerobic ammonium oxidation coupled to iron reduction from paddy soils in a chronosequence
  publication-title: Environ. Sci. Technol.
  contributor:
    fullname: Zhu
– volume: 99
  start-page: 6419
  year: 2008
  end-page: 6425
  ident: bib75
  article-title: Long-term stability of partial nitritation of swine wastewater digester liquor and its subsequent treatment by Anammox
  publication-title: Bioresour. Technol.
  contributor:
    fullname: Furukawa
– volume: 20
  start-page: 1723
  year: 2018
  end-page: 1738
  ident: bib79
  article-title: Microbial pathways for nitrogen loss in an upland soil
  publication-title: Environ. Microbiol.
  contributor:
    fullname: Zhu
– volume: 142
  start-page: 2187
  year: 1996
  end-page: 2196
  ident: bib66
  article-title: Autotrophic growth of anaerobic ammonium-oxidizing micro-organisms in a fluidized bed reactor
  publication-title: Microbiology
  contributor:
    fullname: Kuenen
– volume: 68
  start-page: 1312
  year: 2002
  end-page: 1318
  ident: bib64
  article-title: Production of N
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Dalsgaard
– volume: 102
  start-page: 6478
  year: 2005
  end-page: 6483
  ident: bib35
  article-title: Massive nitrogen loss from the Benguela upwelling system through anaerobic ammonium oxidation
  publication-title: Proc. Natl. Acad. Sci. U. S. A
  contributor:
    fullname: Jetten
– volume: 46
  start-page: 8834
  year: 2012
  end-page: 8842
  ident: bib69
  article-title: Anammox bacterial abundance, activity, and contribution in riparian sediments of the pearl river estuary
  publication-title: Environ. Sci. Technol.
  contributor:
    fullname: Yin
– volume: 13
  start-page: 699
  year: 2013
  end-page: 710
  ident: bib74
  article-title: Review of denitrification in tropical and subtropical soils of terrestrial ecosystems
  publication-title: J. Soils Sediments
  contributor:
    fullname: Reverchon
– volume: 336
  start-page: 79
  year: 2012
  end-page: 88
  ident: bib70
  article-title: Co-occurrence and distribution of nitrite-dependent anaerobic ammonium and methane-oxidizing bacteria in a paddy soil
  publication-title: FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Lett.
  contributor:
    fullname: Op den Camp
– volume: 312
  start-page: 1
  year: 2008
  end-page: 6
  ident: bib27
  article-title: The rhizosphere: complex by design
  publication-title: Plant Soil
  contributor:
    fullname: Hinsinger
– volume: 97
  start-page: 1785
  year: 2013
  end-page: 1798
  ident: bib68
  article-title: Dominance of Candidatus Scalindua species in anammox community revealed in soils with different duration of rice paddy cultivation in Northeast China
  publication-title: Appl. Microbiol. Biotechnol.
  contributor:
    fullname: Gu
– volume: 327
  start-page: 1008
  year: 2010
  end-page: 1010
  ident: bib14
  article-title: Significant acidification in major Chinese croplands
  publication-title: Science
  contributor:
    fullname: Zhang
– volume: 174
  start-page: 554
  year: 2011
  end-page: 567
  ident: bib59
  article-title: Formation of hybrid N
  publication-title: J. Plant Nutr. Soil Sci.
  contributor:
    fullname: Stange
– volume: 71
  start-page: 1066
  year: 2005
  end-page: 1071
  ident: bib15
  article-title: Propionate oxidation by and methanol inhibition of anaerobic ammonium-oxidizing bacteria
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Schmidt
– volume: 479
  start-page: 127
  year: 2011
  end-page: U159
  ident: bib31
  article-title: Molecular mechanism of anaerobic ammonium oxidation
  publication-title: Nature
  contributor:
    fullname: Strous
– volume: 440
  start-page: 790
  year: 2006
  end-page: 794
  ident: bib61
  article-title: Deciphering the evolution and metabolism of an anammox bacterium from a community genome
  publication-title: Nature
  contributor:
    fullname: Le Paslier
– volume: 22
  start-page: 232
  year: 2007
  end-page: 242
  ident: bib1
  article-title: Detection of anammox activity and diversity of anammox bacteria-related 16S rRNA genes in coastal marine sediment in Japan
  publication-title: Microb. Environ.
  contributor:
    fullname: Suwa
– volume: 39
  start-page: 1799
  year: 2011
  end-page: 1804
  ident: bib12
  article-title: The metagenomic basis of anammox metabolism in Candidatus 'Brocadia fulgida'
  publication-title: Biochem. Soc. Trans.
  contributor:
    fullname: Jetten
– volume: 3
  start-page: 341
  year: 1998
  end-page: 357
  ident: bib41
  article-title: Localization of iron-reducing activity in paddy soil by profile studies
  publication-title: Found. Sci.
  contributor:
    fullname: Maier
– volume: 82
  start-page: 2410
  year: 2001
  end-page: 2416
  ident: bib57
  article-title: Dissimilatory nitrate reduction to ammonium in upland tropical forest soils
  publication-title: Ecology
  contributor:
    fullname: Firestone
– volume: 343
  start-page: 313
  year: 2011
  end-page: 327
  ident: bib85
  article-title: The contribution of nitrogen transformation processes to total N
  publication-title: Plant Soil
  contributor:
    fullname: Cai
– volume: 599
  start-page: 1064
  year: 2017
  end-page: 1072
  ident: bib13
  article-title: Effects of various fertilization regimes on abundance and activity of anaerobic ammonium oxidation bacteria in rice-wheat cropping systems in China
  publication-title: Sci. Total Environ.
  contributor:
    fullname: Liang
– volume: 96
  start-page: 249
  year: 2007
  end-page: 305
  ident: bib45
  article-title: Ecology of denitrifying prokaryotes in agricultural soil
  publication-title: Adv. Agron.
  contributor:
    fullname: Schloter
– start-page: 3
  year: 2002
  end-page: 20
  ident: bib46
  article-title: Global impact of salinity and agricultural ecosystems
  publication-title: Salinity: Environment - Plants - Molecules
  contributor:
    fullname: Läuchli
– volume: 99
  start-page: 5709
  year: 2015
  end-page: 5718
  ident: bib55
  article-title: Occurrence and importance of anaerobic ammonium-oxidising bacteria in vegetable soils
  publication-title: Appl. Microbiol. Biotechnol.
  contributor:
    fullname: Cheng
– volume: 13
  start-page: 87
  year: 1991
  end-page: 115
  ident: bib67
  article-title: Nitrogen limitation on land and in the sea: how can it occur?
  publication-title: Biogeochemistry
  contributor:
    fullname: Howarth
– volume: 16
  start-page: 177
  year: 1995
  end-page: 183
  ident: bib42
  article-title: Anaerobic ammonium oxidation discovered in a denitrifying fluidized bed reactor
  publication-title: FEMS Microbiol. Ecol.
  contributor:
    fullname: Kuenen
– volume: 34
  start-page: 461
  year: 1988
  end-page: 465
  ident: bib77
  article-title: Development of a new rhizobox system to study the nutrient status in the rhizosphere
  publication-title: Soil Sci. Plant Nutr.
  contributor:
    fullname: Chino
– volume: 50
  start-page: 589
  year: 1998
  end-page: 596
  ident: bib60
  article-title: The sequencing batch reactor as a powerful tool for the study of slowly growing anaerobic ammonium-oxidizing microorganisms
  publication-title: Appl. Microbiol. Biotechnol.
  contributor:
    fullname: Jetten
– volume: 86
  start-page: 1043
  year: 2010
  end-page: 1055
  ident: bib80
  article-title: Potential roles of anaerobic ammonium and methane oxidation in the nitrogen cycle of wetland ecosystems
  publication-title: Appl. Microbiol. Biotechnol.
  contributor:
    fullname: Yin
– volume: 69
  start-page: 6447
  year: 2003
  end-page: 6454
  ident: bib65
  article-title: Anaerobic ammonium oxidation measured in sediments along the Thames estuary, United Kingdom
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Deflandre
– volume: 91
  start-page: 887
  year: 2011
  end-page: 894
  ident: bib10
  article-title: Versatility and application of anaerobic ammonium-oxidizing bacteria
  publication-title: Appl. Microbiol. Biotechnol.
  contributor:
    fullname: Tao
– volume: 123
  start-page: 237
  year: 2015
  end-page: 250
  ident: bib43
  article-title: Molecular and geochemical constraints on anaerobic ammonium oxidation (anammox) in a riparian zone of the Seine Estuary (France)
  publication-title: Biogeochemistry
  contributor:
    fullname: Zopfi
– volume: 422
  start-page: 608
  year: 2003
  end-page: 611
  ident: bib36
  article-title: Anaerobic ammonium oxidation by anammox bacteria in the Black Sea
  publication-title: Nature
  contributor:
    fullname: Jetten
– volume: 47
  start-page: 1711
  year: 2013
  end-page: 1725
  ident: bib58
  article-title: Toward the development of microbial indicators for wetland assessment
  publication-title: Water Res.
  contributor:
    fullname: Hu
– volume: 81
  start-page: 938
  year: 2015
  end-page: 947
  ident: bib76
  article-title: Potential contribution of anammox to nitrogen loss from paddy soils in southern China
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Zhu
– volume: 42
  start-page: 9144
  year: 2008
  end-page: 9150
  ident: bib8
  article-title: The contribution of anammox and denitrification to sediment N
  publication-title: Environ. Sci. Technol.
  contributor:
    fullname: Davison
– volume: 50
  start-page: 9972
  year: 2016
  end-page: 9980
  ident: bib52
  article-title: Dissimilatory nitrate reduction processes in typical Chinese paddy soils: rates, relative contributions, and influencing factors
  publication-title: Environ. Sci. Technol.
  contributor:
    fullname: Yan
– volume: 4
  start-page: 450
  year: 2010
  end-page: 454
  ident: bib21
  article-title: Molecular detection of anammox bacteria in terrestrial ecosystems: distribution and diversity
  publication-title: ISME J.
  contributor:
    fullname: Zopfi
– volume: 91
  start-page: 212
  year: 2015
  end-page: 221
  ident: bib3
  article-title: Activity, abundance and community structure of anammox bacteria along depth profiles in three different paddy soils
  publication-title: Soil Biol. Biochem.
  contributor:
    fullname: Zhang
– year: 2010
  ident: bib23
  article-title: Description of the Order Brocadiales
  contributor:
    fullname: Strous
– volume: 5
  year: 2015
  ident: bib83
  article-title: Ubiquitous anaerobic ammonium oxidation in inland waters of China: an overlooked nitrous oxide mitigation process
  publication-title: Sci. Rep.
  contributor:
    fullname: Qu
– volume: 4
  start-page: 517
  year: 2012
  end-page: 522
  ident: bib22
  article-title: Soil microbial-root and microbial-rhizosphere processes to increase nitrogen availability and retention in agroecosystems
  publication-title: Curr. Opinion Environ. Sustain.
  contributor:
    fullname: Lazcano
– volume: 79
  start-page: 6167
  year: 2013
  end-page: 6172
  ident: bib54
  article-title: Broad distribution of diverse anaerobic ammonium-oxidizing bacteria in Chinese agricultural soils
  publication-title: Appl. Environ. Microbiol.
  contributor:
    fullname: Hu
– volume: 6
  year: 2011
  ident: 10.1016/j.envpol.2018.10.050_bib29
  article-title: Oxygen sensitivity of anammox and coupled N-cycle processes in oxygen minimum zones
  publication-title: PloS One
  doi: 10.1371/journal.pone.0029299
  contributor:
    fullname: Kalvelage
– volume: 6
  start-page: 103
  year: 2013
  ident: 10.1016/j.envpol.2018.10.050_bib81
  article-title: Hotspots of anaerobic ammonium oxidation at land-freshwater interfaces
  publication-title: Nat. Geosci.
  doi: 10.1038/ngeo1683
  contributor:
    fullname: Zhu
– volume: 39
  start-page: 1799
  year: 2011
  ident: 10.1016/j.envpol.2018.10.050_bib12
  article-title: The metagenomic basis of anammox metabolism in Candidatus 'Brocadia fulgida'
  publication-title: Biochem. Soc. Trans.
  doi: 10.1042/BST20110707
  contributor:
    fullname: Gori
– volume: 63
  start-page: 107
  year: 2003
  ident: 10.1016/j.envpol.2018.10.050_bib24
  article-title: Anaerobic ammonium oxidation by marine and freshwater planctomycete-like bacteria
  publication-title: Appl. Microbiol. Biotechnol.
  doi: 10.1007/s00253-003-1422-4
  contributor:
    fullname: Jetten
– volume: 50
  start-page: 9972
  year: 2016
  ident: 10.1016/j.envpol.2018.10.050_bib52
  article-title: Dissimilatory nitrate reduction processes in typical Chinese paddy soils: rates, relative contributions, and influencing factors
  publication-title: Environ. Sci. Technol.
  doi: 10.1021/acs.est.6b01765
  contributor:
    fullname: Shan
– volume: 68
  start-page: 1312
  year: 2002
  ident: 10.1016/j.envpol.2018.10.050_bib64
  article-title: Production of N2 through anaerobic ammonium oxidation coupled to nitrate reduction in marine sediments
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.68.3.1312-1318.2002
  contributor:
    fullname: Thamdrup
– volume: 77
  start-page: 966
  year: 2011
  ident: 10.1016/j.envpol.2018.10.050_bib17
  article-title: New anaerobic, ammonium-oxidizing community enriched from peat soil
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.02402-10
  contributor:
    fullname: Hu
– volume: 288
  start-page: 56
  year: 2017
  ident: 10.1016/j.envpol.2018.10.050_bib56
  article-title: Vertical distribution and activity of anaerobic ammonium-oxidising bacteria in a vegetable field
  publication-title: Geoderma
  doi: 10.1016/j.geoderma.2016.11.007
  contributor:
    fullname: Shen
– volume: 50
  start-page: 589
  year: 1998
  ident: 10.1016/j.envpol.2018.10.050_bib60
  article-title: The sequencing batch reactor as a powerful tool for the study of slowly growing anaerobic ammonium-oxidizing microorganisms
  publication-title: Appl. Microbiol. Biotechnol.
  doi: 10.1007/s002530051340
  contributor:
    fullname: Strous
– volume: 32
  start-page: 238
  year: 2009
  ident: 10.1016/j.envpol.2018.10.050_bib34
  article-title: Anammox in tidal marsh sediments: the role of salinity, nitrogen loading, and marsh vegetation
  publication-title: Estuar. Coast
  doi: 10.1007/s12237-008-9131-y
  contributor:
    fullname: Koop-Jakobsen
– volume: 422
  start-page: 608
  year: 2003
  ident: 10.1016/j.envpol.2018.10.050_bib36
  article-title: Anaerobic ammonium oxidation by anammox bacteria in the Black Sea
  publication-title: Nature
  doi: 10.1038/nature01472
  contributor:
    fullname: Kuypers
– volume: 98
  start-page: 3257
  year: 2014
  ident: 10.1016/j.envpol.2018.10.050_bib71
  article-title: Effects of allylthiourea, salinity, and pH on ammonia/ammonium-oxidizing prokaryotes in mangrove sediment incubated in laboratory microcosms
  publication-title: Appl. Microbiol. Biotechnol.
  doi: 10.1007/s00253-013-5399-3
  contributor:
    fullname: Wang
– volume: 22
  start-page: 232
  year: 2007
  ident: 10.1016/j.envpol.2018.10.050_bib1
  article-title: Detection of anammox activity and diversity of anammox bacteria-related 16S rRNA genes in coastal marine sediment in Japan
  publication-title: Microb. Environ.
  doi: 10.1264/jsme2.22.232
  contributor:
    fullname: Amano
– volume: 54
  start-page: 33
  year: 2008
  ident: 10.1016/j.envpol.2018.10.050_bib16
  article-title: Various players in the nitrogen cycle: diversity and functions of the microorganisms involved in nitrification and denitrification
  publication-title: Soil Sci. Plant Nutr.
  doi: 10.1111/j.1747-0765.2007.00195.x
  contributor:
    fullname: Hayatsu
– volume: 100
  start-page: 59
  year: 2016
  ident: 10.1016/j.envpol.2018.10.050_bib38
  article-title: The phenological stage of rice growth determines anaerobic ammonium oxidation activity in rhizosphere soil
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/j.soilbio.2016.05.015
  contributor:
    fullname: Li
– volume: 97
  start-page: 1785
  year: 2013
  ident: 10.1016/j.envpol.2018.10.050_bib68
  article-title: Dominance of Candidatus Scalindua species in anammox community revealed in soils with different duration of rice paddy cultivation in Northeast China
  publication-title: Appl. Microbiol. Biotechnol.
  doi: 10.1007/s00253-012-4036-x
  contributor:
    fullname: Wang
– volume: 13
  start-page: 87
  year: 1991
  ident: 10.1016/j.envpol.2018.10.050_bib67
  article-title: Nitrogen limitation on land and in the sea: how can it occur?
  publication-title: Biogeochemistry
  doi: 10.1007/BF00002772
  contributor:
    fullname: Vitousek
– volume: 5
  year: 2015
  ident: 10.1016/j.envpol.2018.10.050_bib83
  article-title: Ubiquitous anaerobic ammonium oxidation in inland waters of China: an overlooked nitrous oxide mitigation process
  publication-title: Sci. Rep.
  doi: 10.1038/srep17306
  contributor:
    fullname: Zhu
– volume: 43
  start-page: 5301
  year: 2009
  ident: 10.1016/j.envpol.2018.10.050_bib28
  article-title: Full-scale nitrogen removal from digester liquid with partial nitritation and anammox in one SBR
  publication-title: Environ. Sci. Technol.
  doi: 10.1021/es900107w
  contributor:
    fullname: Joss
– volume: 80
  start-page: 7611
  year: 2014
  ident: 10.1016/j.envpol.2018.10.050_bib53
  article-title: Evidence for the Co-occurrence of nitrite-dependent anaerobic ammonium and methane oxidation processes in a flooded paddy field
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.02379-14
  contributor:
    fullname: Shen
– volume: 327
  start-page: 1008
  year: 2010
  ident: 10.1016/j.envpol.2018.10.050_bib14
  article-title: Significant acidification in major Chinese croplands
  publication-title: Science
  doi: 10.1126/science.1182570
  contributor:
    fullname: Guo
– volume: 47
  start-page: 1711
  year: 2013
  ident: 10.1016/j.envpol.2018.10.050_bib58
  article-title: Toward the development of microbial indicators for wetland assessment
  publication-title: Water Res.
  doi: 10.1016/j.watres.2013.01.023
  contributor:
    fullname: Sims
– volume: 336
  start-page: 79
  year: 2012
  ident: 10.1016/j.envpol.2018.10.050_bib70
  article-title: Co-occurrence and distribution of nitrite-dependent anaerobic ammonium and methane-oxidizing bacteria in a paddy soil
  publication-title: FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Lett.
  doi: 10.1111/j.1574-6968.2012.02654.x
  contributor:
    fullname: Wang
– start-page: 15
  year: 1991
  ident: 10.1016/j.envpol.2018.10.050_bib40
  contributor:
    fullname: Lynch
– volume: 79
  start-page: 6167
  year: 2013
  ident: 10.1016/j.envpol.2018.10.050_bib54
  article-title: Broad distribution of diverse anaerobic ammonium-oxidizing bacteria in Chinese agricultural soils
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.00884-13
  contributor:
    fullname: Shen
– volume: 99
  start-page: 6419
  year: 2008
  ident: 10.1016/j.envpol.2018.10.050_bib75
  article-title: Long-term stability of partial nitritation of swine wastewater digester liquor and its subsequent treatment by Anammox
  publication-title: Bioresour. Technol.
  doi: 10.1016/j.biortech.2007.11.052
  contributor:
    fullname: Yamamoto
– volume: 39
  start-page: 1811
  year: 2011
  ident: 10.1016/j.envpol.2018.10.050_bib18
  article-title: Anaerobic ammonium oxidation (anammox) in different natural ecosystems
  publication-title: Biochem. Soc. Trans.
  doi: 10.1042/BST20110711
  contributor:
    fullname: Hu
– volume: 63
  start-page: 2446
  year: 1997
  ident: 10.1016/j.envpol.2018.10.050_bib62
  article-title: Effects of aerobic and microaerobic conditions on anaerobic ammonium-oxidizing (anammox) sludge
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.63.6.2446-2448.1997
  contributor:
    fullname: Strous
– volume: 15
  start-page: 1977
  year: 2015
  ident: 10.1016/j.envpol.2018.10.050_bib2
  article-title: Candidatus Brocadia and Candidatus Kuenenia predominated in anammox bacterial community in selected Chinese paddy soils
  publication-title: J. Soils Sediments
  doi: 10.1007/s11368-015-1131-5
  contributor:
    fullname: Bai
– volume: 91
  start-page: 887
  year: 2011
  ident: 10.1016/j.envpol.2018.10.050_bib10
  article-title: Versatility and application of anaerobic ammonium-oxidizing bacteria
  publication-title: Appl. Microbiol. Biotechnol.
  doi: 10.1007/s00253-011-3411-3
  contributor:
    fullname: Gao
– volume: 86
  start-page: 1043
  year: 2010
  ident: 10.1016/j.envpol.2018.10.050_bib80
  article-title: Potential roles of anaerobic ammonium and methane oxidation in the nitrogen cycle of wetland ecosystems
  publication-title: Appl. Microbiol. Biotechnol.
  doi: 10.1007/s00253-010-2451-4
  contributor:
    fullname: Zhu
– volume: 142
  start-page: 2187
  year: 1996
  ident: 10.1016/j.envpol.2018.10.050_bib66
  article-title: Autotrophic growth of anaerobic ammonium-oxidizing micro-organisms in a fluidized bed reactor
  publication-title: Microbiology
  doi: 10.1099/13500872-142-8-2187
  contributor:
    fullname: Van de Graaf
– volume: 91
  start-page: 212
  year: 2015
  ident: 10.1016/j.envpol.2018.10.050_bib3
  article-title: Activity, abundance and community structure of anammox bacteria along depth profiles in three different paddy soils
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/j.soilbio.2015.08.040
  contributor:
    fullname: Bai
– volume: 479
  start-page: 127
  year: 2011
  ident: 10.1016/j.envpol.2018.10.050_bib31
  article-title: Molecular mechanism of anaerobic ammonium oxidation
  publication-title: Nature
  doi: 10.1038/nature10453
  contributor:
    fullname: Kartal
– volume: 9
  start-page: 2059
  year: 2015
  ident: 10.1016/j.envpol.2018.10.050_bib44
  article-title: Nitrogen loss by anaerobic oxidation of ammonium in rice rhizosphere
  publication-title: ISME J.
  doi: 10.1038/ismej.2015.25
  contributor:
    fullname: Nie
– volume: 43
  start-page: 407
  year: 2012
  ident: 10.1016/j.envpol.2018.10.050_bib63
  article-title: New pathways and processes in the global nitrogen cycle
  publication-title: Annu. Rev. Ecol. Evol. Syst.
  doi: 10.1146/annurev-ecolsys-102710-145048
  contributor:
    fullname: Thamdrup
– volume: 79
  start-page: 168
  year: 2013
  ident: 10.1016/j.envpol.2018.10.050_bib39
  article-title: Co-occurring anammox, denitrification, and codenitrification in agricultural soils
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.02520-12
  contributor:
    fullname: Long
– volume: 82
  start-page: 2410
  year: 2001
  ident: 10.1016/j.envpol.2018.10.050_bib57
  article-title: Dissimilatory nitrate reduction to ammonium in upland tropical forest soils
  publication-title: Ecology
  doi: 10.1890/0012-9658(2001)082[2410:DNRTAI]2.0.CO;2
  contributor:
    fullname: Silver
– volume: 82
  start-page: 4602
  year: 2016
  ident: 10.1016/j.envpol.2018.10.050_bib73
  article-title: Contribution of anammox to nitrogen removal in two temperate forest soils
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.00888-16
  contributor:
    fullname: Xi
– volume: 13
  start-page: 699
  year: 2013
  ident: 10.1016/j.envpol.2018.10.050_bib74
  article-title: Review of denitrification in tropical and subtropical soils of terrestrial ecosystems
  publication-title: J. Soils Sediments
  doi: 10.1007/s11368-013-0650-1
  contributor:
    fullname: Xu
– volume: 81
  start-page: 938
  year: 2015
  ident: 10.1016/j.envpol.2018.10.050_bib76
  article-title: Potential contribution of anammox to nitrogen loss from paddy soils in southern China
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.02664-14
  contributor:
    fullname: Yang
– volume: 101
  start-page: 6659
  year: 2017
  ident: 10.1016/j.envpol.2018.10.050_bib78
  article-title: Soil anammox community structure in different land use soils treatment with C-13 urea as determined by analysis of phospholipid fatty acids
  publication-title: Appl. Microbiol. Biotechnol.
  doi: 10.1007/s00253-017-8404-4
  contributor:
    fullname: Zhou
– volume: 30
  start-page: 39
  year: 2007
  ident: 10.1016/j.envpol.2018.10.050_bib32
  article-title: Candidatus “Anammoxoglobus propionicus” a new propionate oxidizing species of anaerobic ammonium oxidizing bacteria
  publication-title: Syst. Appl. Microbiol.
  doi: 10.1016/j.syapm.2006.03.004
  contributor:
    fullname: Kartal
– volume: 7
  start-page: 961
  year: 2015
  ident: 10.1016/j.envpol.2018.10.050_bib84
  article-title: Occurrence, activity and contribution of anammox in some freshwater extreme environments
  publication-title: Environ. Microbiol. Rep.
  doi: 10.1111/1758-2229.12341
  contributor:
    fullname: Zhu
– volume: 42
  start-page: 9144
  year: 2008
  ident: 10.1016/j.envpol.2018.10.050_bib8
  article-title: The contribution of anammox and denitrification to sediment N2 production in a surface flow constructed wetland
  publication-title: Environ. Sci. Technol.
  doi: 10.1021/es801175t
  contributor:
    fullname: Erler
– volume: 321
  start-page: 305
  year: 2009
  ident: 10.1016/j.envpol.2018.10.050_bib47
  article-title: Acquisition of phosphorus and nitrogen in the rhizosphere and plant growth promotion by microorganisms
  publication-title: Plant Soil
  doi: 10.1007/s11104-009-9895-2
  contributor:
    fullname: Richardson
– volume: 45
  start-page: 778
  year: 2008
  ident: 10.1016/j.envpol.2018.10.050_bib86
  article-title: Research on soil nitrogen in China
  publication-title: Acta Pedol. Sin.
  contributor:
    fullname: Zhu
– volume: 57
  start-page: 1331
  year: 2012
  ident: 10.1016/j.envpol.2018.10.050_bib6
  article-title: Anammox and denitrification in the oxygen minimum zone of the eastern South Pacific
  publication-title: Limnol. Oceanogr.
  doi: 10.4319/lo.2012.57.5.1331
  contributor:
    fullname: Dalsgaard
– volume: 71
  start-page: 1066
  year: 2005
  ident: 10.1016/j.envpol.2018.10.050_bib15
  article-title: Propionate oxidation by and methanol inhibition of anaerobic ammonium-oxidizing bacteria
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.71.2.1066-1071.2005
  contributor:
    fullname: Guven
– volume: 54
  start-page: 341
  year: 2018
  ident: 10.1016/j.envpol.2018.10.050_bib51
  article-title: Anaerobic ammonium oxidation and denitrification in a paddy soil as affected by temperature, pH, organic carbon, and substrates
  publication-title: Biol. Fertil. Soils
  doi: 10.1007/s00374-018-1263-z
  contributor:
    fullname: Shan
– volume: 42
  start-page: 2058
  year: 2010
  ident: 10.1016/j.envpol.2018.10.050_bib11
  article-title: Pathways of nitrogen utilization by soil microorganisms - a review
  publication-title: Soil Biol. Biochem.
  doi: 10.1016/j.soilbio.2010.08.021
  contributor:
    fullname: Geisseler
– volume: 16
  start-page: 177
  year: 1995
  ident: 10.1016/j.envpol.2018.10.050_bib42
  article-title: Anaerobic ammonium oxidation discovered in a denitrifying fluidized bed reactor
  publication-title: FEMS Microbiol. Ecol.
  doi: 10.1111/j.1574-6941.1995.tb00281.x
  contributor:
    fullname: Mulder
– volume: 4
  start-page: 517
  year: 2012
  ident: 10.1016/j.envpol.2018.10.050_bib22
  article-title: Soil microbial-root and microbial-rhizosphere processes to increase nitrogen availability and retention in agroecosystems
  publication-title: Curr. Opinion Environ. Sustain.
  doi: 10.1016/j.cosust.2012.08.003
  contributor:
    fullname: Jackson
– volume: 5
  start-page: 1905
  year: 2011
  ident: 10.1016/j.envpol.2018.10.050_bib82
  article-title: Anaerobic ammonia oxidation in a fertilized paddy soil
  publication-title: ISME J.
  doi: 10.1038/ismej.2011.63
  contributor:
    fullname: Zhu
– volume: 22
  start-page: 421
  year: 1998
  ident: 10.1016/j.envpol.2018.10.050_bib25
  article-title: The anaerobic oxidation of ammonium
  publication-title: FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Rev.
  contributor:
    fullname: Jetten
– volume: 69
  start-page: 6447
  year: 2003
  ident: 10.1016/j.envpol.2018.10.050_bib65
  article-title: Anaerobic ammonium oxidation measured in sediments along the Thames estuary, United Kingdom
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.69.11.6447-6454.2003
  contributor:
    fullname: Trimmer
– volume: 9
  start-page: 635
  year: 2007
  ident: 10.1016/j.envpol.2018.10.050_bib30
  article-title: Anammox bacteria disguised as denitrifiers: nitrate reduction to dinitrogen gas via nitrite and ammonium
  publication-title: Environ. Microbiol.
  doi: 10.1111/j.1462-2920.2006.01183.x
  contributor:
    fullname: Kartal
– start-page: 1034
  year: 2014
  ident: 10.1016/j.envpol.2018.10.050_bib19
  article-title: Effects of ferrous and manganese ions on anammox process in sequencing batch biofilm reactors
  publication-title: J. Environ. Sci.
  doi: 10.1016/S1001-0742(13)60531-8
  contributor:
    fullname: Huang
– volume: 46
  start-page: 8834
  year: 2012
  ident: 10.1016/j.envpol.2018.10.050_bib69
  article-title: Anammox bacterial abundance, activity, and contribution in riparian sediments of the pearl river estuary
  publication-title: Environ. Sci. Technol.
  doi: 10.1021/es3017446
  contributor:
    fullname: Wang
– volume: 12
  start-page: 283
  year: 2001
  ident: 10.1016/j.envpol.2018.10.050_bib26
  article-title: Microbiology and application of the anaerobic ammonium oxidation (‘anammox’) process
  publication-title: Curr. Opin. Biotechnol.
  doi: 10.1016/S0958-1669(00)00211-1
  contributor:
    fullname: Jetten
– volume: 4
  start-page: 450
  year: 2010
  ident: 10.1016/j.envpol.2018.10.050_bib21
  article-title: Molecular detection of anammox bacteria in terrestrial ecosystems: distribution and diversity
  publication-title: ISME J.
  doi: 10.1038/ismej.2009.125
  contributor:
    fullname: Humbert
– volume: 123
  start-page: 237
  year: 2015
  ident: 10.1016/j.envpol.2018.10.050_bib43
  article-title: Molecular and geochemical constraints on anaerobic ammonium oxidation (anammox) in a riparian zone of the Seine Estuary (France)
  publication-title: Biogeochemistry
  doi: 10.1007/s10533-014-0066-z
  contributor:
    fullname: Naeher
– volume: 102
  start-page: 6478
  year: 2005
  ident: 10.1016/j.envpol.2018.10.050_bib35
  article-title: Massive nitrogen loss from the Benguela upwelling system through anaerobic ammonium oxidation
  publication-title: Proc. Natl. Acad. Sci. U. S. A
  doi: 10.1073/pnas.0502088102
  contributor:
    fullname: Kuypers
– volume: 71
  start-page: 1677
  year: 2005
  ident: 10.1016/j.envpol.2018.10.050_bib49
  article-title: Biomarkers for in situ detection of anaerobic ammonium-oxidizing (anammox) bacteria
  publication-title: Appl. Environ. Microbiol.
  doi: 10.1128/AEM.71.4.1677-1684.2005
  contributor:
    fullname: Schmid
– volume: 27
  start-page: 316
  year: 2012
  ident: 10.1016/j.envpol.2018.10.050_bib48
  article-title: Detection of anammox activity and 16S rRNA genes in ravine paddy field soil
  publication-title: Microb. Environ.
  doi: 10.1264/jsme2.ME11330
  contributor:
    fullname: Sato
– volume: 100
  start-page: 5437
  year: 2009
  ident: 10.1016/j.envpol.2018.10.050_bib9
  article-title: Innovative treatment system for digester liquor using anammox process
  publication-title: Bioresour. Technol.
  doi: 10.1016/j.biortech.2008.11.055
  contributor:
    fullname: Furukawa
– volume: 113
  start-page: 117
  year: 2017
  ident: 10.1016/j.envpol.2018.10.050_bib20
  article-title: Depth-specific distribution and diversity of nitrite-dependent anaerobic ammonium and methane-oxidizing bacteria in upland-cropping soil under different fertilizer treatments
  publication-title: Appl. Soil Ecol.
  doi: 10.1016/j.apsoil.2017.02.005
  contributor:
    fullname: Hui
– volume: 96
  start-page: 249
  year: 2007
  ident: 10.1016/j.envpol.2018.10.050_bib45
  article-title: Ecology of denitrifying prokaryotes in agricultural soil
  publication-title: Adv. Agron.
  doi: 10.1016/S0065-2113(07)96003-4
  contributor:
    fullname: Philippot
– volume: 63
  start-page: 46
  year: 2008
  ident: 10.1016/j.envpol.2018.10.050_bib33
  article-title: Candidatus 'Brocadia fulgida': an autofluorescent anaerobic ammonium oxidizing bacterium
  publication-title: FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Ecol.
  doi: 10.1111/j.1574-6941.2007.00408.x
  contributor:
    fullname: Kartal
– year: 2010
  ident: 10.1016/j.envpol.2018.10.050_bib23
  contributor:
    fullname: Jetten
– volume: 312
  start-page: 1
  year: 2008
  ident: 10.1016/j.envpol.2018.10.050_bib27
  article-title: The rhizosphere: complex by design
  publication-title: Plant Soil
  doi: 10.1007/s11104-008-9774-2
  contributor:
    fullname: Jones
– volume: 48
  start-page: 10641
  year: 2014
  ident: 10.1016/j.envpol.2018.10.050_bib7
  article-title: Nitrogen loss through anaerobic ammonium oxidation coupled to iron reduction from paddy soils in a chronosequence
  publication-title: Environ. Sci. Technol.
  doi: 10.1021/es503113s
  contributor:
    fullname: Ding
– volume: 174
  start-page: 554
  year: 2011
  ident: 10.1016/j.envpol.2018.10.050_bib59
  article-title: Formation of hybrid N2O in a suspended soil due to co-denitrification of NH2OH
  publication-title: J. Plant Nutr. Soil Sci.
  doi: 10.1002/jpln.201000200
  contributor:
    fullname: Spott
– volume: 440
  start-page: 790
  year: 2006
  ident: 10.1016/j.envpol.2018.10.050_bib61
  article-title: Deciphering the evolution and metabolism of an anammox bacterium from a community genome
  publication-title: Nature
  doi: 10.1038/nature04647
  contributor:
    fullname: Strous
– volume: 3
  start-page: 341
  year: 1998
  ident: 10.1016/j.envpol.2018.10.050_bib41
  article-title: Localization of iron-reducing activity in paddy soil by profile studies
  publication-title: Found. Sci.
  doi: 10.1023/A:1009650720124
  contributor:
    fullname: Maier
– volume: 8
  start-page: 1857
  year: 2006
  ident: 10.1016/j.envpol.2018.10.050_bib50
  article-title: Anaerobic ammonium oxidation in a tropical freshwater system (Lake Tanganyika)
  publication-title: Environ. Microbiol.
  doi: 10.1111/j.1462-2920.2006.01074.x
  contributor:
    fullname: Schubert
– volume: 99
  start-page: 5709
  year: 2015
  ident: 10.1016/j.envpol.2018.10.050_bib55
  article-title: Occurrence and importance of anaerobic ammonium-oxidising bacteria in vegetable soils
  publication-title: Appl. Microbiol. Biotechnol.
  doi: 10.1007/s00253-015-6454-z
  contributor:
    fullname: Shen
– volume: 599
  start-page: 1064
  year: 2017
  ident: 10.1016/j.envpol.2018.10.050_bib13
  article-title: Effects of various fertilization regimes on abundance and activity of anaerobic ammonium oxidation bacteria in rice-wheat cropping systems in China
  publication-title: Sci. Total Environ.
  doi: 10.1016/j.scitotenv.2017.04.240
  contributor:
    fullname: Gu
– volume: 61
  start-page: 533
  year: 1997
  ident: 10.1016/j.envpol.2018.10.050_bib87
  article-title: Cell biology and molecular basis of denitrification
  publication-title: Microbiol. Mol. Biol. Rev.: MMBR
  doi: 10.1128/.61.4.533-616.1997
  contributor:
    fullname: Zumft
– start-page: 3
  year: 2002
  ident: 10.1016/j.envpol.2018.10.050_bib46
  article-title: Global impact of salinity and agricultural ecosystems
  contributor:
    fullname: Pitman
– volume: 34
  start-page: 461
  year: 1988
  ident: 10.1016/j.envpol.2018.10.050_bib77
  article-title: Development of a new rhizobox system to study the nutrient status in the rhizosphere
  publication-title: Soil Sci. Plant Nutr.
  doi: 10.1080/00380768.1988.10415701
  contributor:
    fullname: Youssef
– volume: 10
  start-page: 3106
  year: 2008
  ident: 10.1016/j.envpol.2018.10.050_bib72
  article-title: A microdiversity study of anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones
  publication-title: Environ. Microbiol.
  doi: 10.1111/j.1462-2920.2008.01640.x
  contributor:
    fullname: Woebken
– volume: 24
  start-page: 691
  year: 2000
  ident: 10.1016/j.envpol.2018.10.050_bib4
  article-title: Life at the oxic–anoxic interface: microbial activities and adaptations
  publication-title: FEMS Microbiol. Rev.
  doi: 10.1016/S0168-6445(00)00054-1
  contributor:
    fullname: Brune
– volume: 11
  start-page: 1194
  year: 2009
  ident: 10.1016/j.envpol.2018.10.050_bib5
  article-title: Biogeographical distribution of diverse anaerobic ammonium oxidizing (anammox) bacteria in Cape Fear River Estuary
  publication-title: Environ. Microbiol.
  doi: 10.1111/j.1462-2920.2008.01850.x
  contributor:
    fullname: Dale
– volume: 343
  start-page: 313
  year: 2011
  ident: 10.1016/j.envpol.2018.10.050_bib85
  article-title: The contribution of nitrogen transformation processes to total N2O emissions from soils used for intensive vegetable cultivation
  publication-title: Plant Soil
  doi: 10.1007/s11104-011-0720-3
  contributor:
    fullname: Zhu
– volume: 20
  start-page: 1723
  year: 2018
  ident: 10.1016/j.envpol.2018.10.050_bib79
  article-title: Microbial pathways for nitrogen loss in an upland soil
  publication-title: Environ. Microbiol.
  doi: 10.1111/1462-2920.14098
  contributor:
    fullname: Zhu
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Snippet Denitrification is considered as the dominant nitrogen (N) removing pathway, however, anaerobic oxidation of ammonium (anammox) also plays a significant part...
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StartPage 127
SubjectTerms Agricultural soils
Agriculture
Ammonium Compounds - chemistry
Anaerobiosis
Anammox
Denitrification
N loss
Oxic/anoxic interface
Oxidation-Reduction
Rhizosphere
Soil Microbiology
Title Anaerobic ammonium oxidation in agricultural soils-synthesis and prospective
URI https://dx.doi.org/10.1016/j.envpol.2018.10.050
https://www.ncbi.nlm.nih.gov/pubmed/30321707
https://search.proquest.com/docview/2120750864
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