A common framework for developing robust soil fauna classifications
•Classifying organisms has a wide use and a long history in ecology.•We provide a critical overview of the existing classifications used for soil fauna.•We propose semantic clarifications and alternatives to current practices.•We suggest a common framework to define classifications based on function...
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Published in | Geoderma Vol. 426; p. 116073 |
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Main Authors | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Format | Journal Article |
Language | English |
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Elsevier B.V
15.11.2022
Elsevier |
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Abstract | •Classifying organisms has a wide use and a long history in ecology.•We provide a critical overview of the existing classifications used for soil fauna.•We propose semantic clarifications and alternatives to current practices.•We suggest a common framework to define classifications based on functional traits.
Classifying organisms has a wide use and a long history in ecology. However, the meaning of a ‘group of organisms’ and how to group organisms is still the subject of much theoretical and empirical work. Achieving this long quest requires simplifying the complexity of species niches for which relevant morphological, behavioural, biochemical or life-history traits are often used as relevant proxies. Soil fauna is highly diverse and many classifications have been proposed to synthesize both the response of soil organisms to their environment and their effect on soil functioning. Here, we provide a critical overview of the characteristics and limitations of the existing classifications in soil ecology, and propose clarifications and alternatives to current practices. We summarise the similarities and differences in how classifications have been created and used in soil ecology. We propose a harmonization of the current concepts by properly defining ‘guilds’, ‘functional groups’ and ‘trophic groups’ as subcategories of ‘ecological groups’, with different purposes and distinguishing criteria. Finally, based on these concepts, we suggest a common framework to define classifications based on functional traits that allows a better and unified understanding of changes in soil biodiversity and ecosystem functioning. |
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AbstractList | Classifying organisms has a wide use and a long history in ecology. However, the meaning of a ‘group of organisms’ and how to group organisms is still the subject of much theoretical and empirical work. Achieving this long quest requires simplifying the complexity of species niches for which relevant morphological, behavioural, biochemical or life-history traits are often used as relevant proxies. Soil fauna is highly diverse and many classifications have been proposed to synthesize both the response of soil organisms to their environment and their effect on soil functioning. Here, we provide a critical overview of the characteristics and limitations of the existing classifications in soil ecology, and propose clarifications and alternatives to current practices. We summarise the similarities and differences in how classifications have been created and used in soil ecology. We propose a harmonization of the current concepts by properly defining ‘guilds’, ‘functional groups’ and ‘trophic groups’ as subcategories of ‘ecological groups’, with different purposes and distinguishing criteria. Finally, based on these concepts, we suggest a common framework to define classifications based on functional traits that allows a better and unified understanding of changes in soil biodiversity and ecosystem functioning. •Classifying organisms has a wide use and a long history in ecology.•We provide a critical overview of the existing classifications used for soil fauna.•We propose semantic clarifications and alternatives to current practices.•We suggest a common framework to define classifications based on functional traits. Classifying organisms has a wide use and a long history in ecology. However, the meaning of a ‘group of organisms’ and how to group organisms is still the subject of much theoretical and empirical work. Achieving this long quest requires simplifying the complexity of species niches for which relevant morphological, behavioural, biochemical or life-history traits are often used as relevant proxies. Soil fauna is highly diverse and many classifications have been proposed to synthesize both the response of soil organisms to their environment and their effect on soil functioning. Here, we provide a critical overview of the characteristics and limitations of the existing classifications in soil ecology, and propose clarifications and alternatives to current practices. We summarise the similarities and differences in how classifications have been created and used in soil ecology. We propose a harmonization of the current concepts by properly defining ‘guilds’, ‘functional groups’ and ‘trophic groups’ as subcategories of ‘ecological groups’, with different purposes and distinguishing criteria. Finally, based on these concepts, we suggest a common framework to define classifications based on functional traits that allows a better and unified understanding of changes in soil biodiversity and ecosystem functioning. |
ArticleNumber | 116073 |
Author | Pey, Benjamin Thuiller, Wilfried Marsden, Claire Hedde, Mickael Iannelli, Maeva Cortet, Jérôme Calderón Sanou, Irene Si-moussi, Sara Decaëns, Thibaud Trap, Jean Clause, Julia Briones, Maria J.I. Erktan, Amandine Le Guillarme, Nicolas Vergnes, Alan Goulpeau, Arnaud Gérard, Sylvain Brondani, Margot Pétillon, Julien Blight, Olivier Potapov, Anton M. Bonfanti, Jonathan Perrin, William Martinez Almoyna, Camille Conti, Erminia Jouquet, Pascal Brauman, Alain Zaitsev, Andrey Mulder, Christian Joimel-Boulanger, Sophie Capowiez, Yvan |
Author_xml | – sequence: 1 givenname: Mickael surname: Hedde fullname: Hedde, Mickael email: mickael.hedde@inrae.fr organization: Eco&Sols, INRAE – IRD – CIRAD – Institut Agro, Montpellier, France – sequence: 2 givenname: Olivier surname: Blight fullname: Blight, Olivier organization: IMBE, Univ. Avignon – Univ. Aix Marseille – CNRS – IRD, Avignon, France – sequence: 3 givenname: Maria J.I. surname: Briones fullname: Briones, Maria J.I. organization: Dept. Ecología y Biología Animal, Univ. Vigo, Vigo, Spain – sequence: 4 givenname: Jonathan surname: Bonfanti fullname: Bonfanti, Jonathan organization: CEFE, Univ Montpellier, CNRS, EPHE, IRD, Univ Paul-Valéry, Montpellier, France – sequence: 5 givenname: Alain surname: Brauman fullname: Brauman, Alain organization: Eco&Sols, INRAE – IRD – CIRAD – Institut Agro, Montpellier, France – sequence: 6 givenname: Margot surname: Brondani fullname: Brondani, Margot organization: Eco&Sols, INRAE – IRD – CIRAD – Institut Agro, Montpellier, France – sequence: 7 givenname: Irene surname: Calderón Sanou fullname: Calderón Sanou, Irene organization: LECA, Univ. Grenoble Alpes – Univ. Savoie Mont Blanc – CNRS, Grenoble, France – sequence: 8 givenname: Julia surname: Clause fullname: Clause, Julia organization: EBI, Univ. Poitiers – CNRS, Poitiers, France – sequence: 9 givenname: Erminia surname: Conti fullname: Conti, Erminia organization: Dept. Biological, Geological and Environmental Sciences, Univ. Catania, Catania, Italy – sequence: 10 givenname: Jérôme surname: Cortet fullname: Cortet, Jérôme organization: CEFE, Univ Montpellier, CNRS, EPHE, IRD, Univ Paul-Valéry, Montpellier, France – sequence: 11 givenname: Thibaud surname: Decaëns fullname: Decaëns, Thibaud organization: CEFE, Univ Montpellier, CNRS, EPHE, IRD, Univ Paul-Valéry, Montpellier, France – sequence: 12 givenname: Amandine surname: Erktan fullname: Erktan, Amandine organization: Eco&Sols, INRAE – IRD – CIRAD – Institut Agro, Montpellier, France – sequence: 13 givenname: Sylvain surname: Gérard fullname: Gérard, Sylvain organization: Eco&Sols, INRAE – IRD – CIRAD – Institut Agro, Montpellier, France – sequence: 14 givenname: Arnaud surname: Goulpeau fullname: Goulpeau, Arnaud organization: CEFE, Univ Montpellier, CNRS, EPHE, IRD, Univ Paul-Valéry, Montpellier, France – sequence: 15 givenname: Maeva surname: Iannelli fullname: Iannelli, Maeva organization: Eco&Sols, INRAE – IRD – CIRAD – Institut Agro, Montpellier, France – sequence: 16 givenname: Sophie surname: Joimel-Boulanger fullname: Joimel-Boulanger, Sophie organization: EcoSys, Univ. Paris-Saclay – INRAE – AgroParisTech, Thiverval-Grignon, France – sequence: 17 givenname: Pascal surname: Jouquet fullname: Jouquet, Pascal organization: iEES Paris, IRD – Sorbonne Univ. – UPEC – CNRS – INRAe, Bondy, France – sequence: 18 givenname: Nicolas surname: Le Guillarme fullname: Le Guillarme, Nicolas organization: LECA, Univ. Grenoble Alpes – Univ. Savoie Mont Blanc – CNRS, Grenoble, France – sequence: 19 givenname: Claire surname: Marsden fullname: Marsden, Claire organization: Eco&Sols, INRAE – IRD – CIRAD – Institut Agro, Montpellier, France – sequence: 20 givenname: Camille surname: Martinez Almoyna fullname: Martinez Almoyna, Camille organization: LECA, Univ. Grenoble Alpes – Univ. Savoie Mont Blanc – CNRS, Grenoble, France – sequence: 21 givenname: Christian surname: Mulder fullname: Mulder, Christian organization: Dept. Biological, Geological and Environmental Sciences, Univ. Catania, Catania, Italy – sequence: 22 givenname: William surname: Perrin fullname: Perrin, William organization: CEFE, Univ Montpellier, CNRS, EPHE, IRD, Univ Paul-Valéry, Montpellier, France – sequence: 23 givenname: Julien surname: Pétillon fullname: Pétillon, Julien organization: ECOBIO, CNRS – Univ. Rennes 1, Rennes, France – sequence: 24 givenname: Benjamin surname: Pey fullname: Pey, Benjamin organization: LEFE, Univ. Toulouse – CNRS, Toulouse, France – sequence: 25 givenname: Anton M. surname: Potapov fullname: Potapov, Anton M. organization: J. F. Blumenbach Instit. Zoology and Anthropology, Univ. Göttingen, Göttingen, Germany – sequence: 26 givenname: Sara surname: Si-moussi fullname: Si-moussi, Sara organization: LECA, Univ. Grenoble Alpes – Univ. Savoie Mont Blanc – CNRS, Grenoble, France – sequence: 27 givenname: Wilfried surname: Thuiller fullname: Thuiller, Wilfried organization: LECA, Univ. Grenoble Alpes – Univ. Savoie Mont Blanc – CNRS, Grenoble, France – sequence: 28 givenname: Jean surname: Trap fullname: Trap, Jean organization: Eco&Sols, INRAE – IRD – CIRAD – Institut Agro, Montpellier, France – sequence: 29 givenname: Alan surname: Vergnes fullname: Vergnes, Alan organization: CEFE, Univ Montpellier, CNRS, EPHE, IRD, Univ Paul-Valéry, Montpellier, France – sequence: 30 givenname: Andrey surname: Zaitsev fullname: Zaitsev, Andrey organization: A.N. Severtsov Instit. Ecology and Evolution, Russian Acad. of Sciences, Moscow, Russia – sequence: 31 givenname: Yvan surname: Capowiez fullname: Capowiez, Yvan organization: EMMAH, INRAE – Univ. Avignon, Avignon, France |
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Keywords | Soil invertebrates Ecological groups Guilds Trait-based approach Functional groups |
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Snippet | •Classifying organisms has a wide use and a long history in ecology.•We provide a critical overview of the existing classifications used for soil fauna.•We... Classifying organisms has a wide use and a long history in ecology. However, the meaning of a ‘group of organisms’ and how to group organisms is still the... |
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SubjectTerms | biodiversity Biodiversity and Ecology Ecological groups ecosystems Environmental Sciences Functional groups Guilds life history soil soil ecology soil fauna Soil invertebrates species Trait-based approach |
Title | A common framework for developing robust soil fauna classifications |
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