Bradford quantification of Glomalin-Related Soil Protein in coloured extracts of forest soils

•Bradford assay to quantify soil proteins in autoclaved-citrate extracts is subject to interference.•Analysis of GRSP from organic-rich, highly coloured, forest soils is particularly challenging.•Sample dilution and subtraction of pH-dependent colour improve protein determination. Glomalin-related s...

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Published inGeoderma Vol. 372; p. 114394
Main Authors Cissé, G., Essi, M., Nicolas, M., Staunton, S.
Format Journal Article
LanguageEnglish
Published Elsevier B.V 01.08.2020
Elsevier
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ISSN0016-7061
1872-6259
DOI10.1016/j.geoderma.2020.114394

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Abstract •Bradford assay to quantify soil proteins in autoclaved-citrate extracts is subject to interference.•Analysis of GRSP from organic-rich, highly coloured, forest soils is particularly challenging.•Sample dilution and subtraction of pH-dependent colour improve protein determination. Glomalin-related soil protein (GRSP) is thought to represent a fraction of recalcitrant organic matter in soil. But it is recognized that the autoclaved-citrate extraction procedure causes the co-extraction of humic substances which interfere (directly and indirectly) with the Bradford colorimetric assay. The aim of this work was to propose a reliable quantification method of GRSP from forest soil, very rich in organic matter and therefore in colour. We estimated the quantities of GRSP in the topsoil (0–10 cm) of 102 French forests using five methods: i) direct calibration, reasoned dilution with colour correction, ii) direct calibration, reasoned dilution but no colour correction, iii) direct calibration, 1:2 dilution, no colour correction, iv) indirect calibration and v) dilution method. Our results concur that the interference caused by the co-extracted compounds is not related simply to either the colour of the extracts or total soil organic matter content. These findings suggest that for improved accuracy of GRSP estimates using the Bradford method, extracts should be diluted, and the pH-specific absorbance of coloured extracts should be subtracted.
AbstractList Glomalin-related soil protein (GRSP) is thought to represent a fraction of recalcitrant organic matter in soil. But it is recognized that the autoclaved-citrate extraction procedure causes the co-extraction of humic substances which interfere (directly and indirectly) with the Bradford colorimetric assay. The aim of this work was to propose a reliable quantification method of GRSP from forest soil, very rich in organic matter and therefore in colour. We estimated the quantities of GRSP in the topsoil (0–10 cm) of 102 French forests using five methods: i) direct calibration, reasoned dilution with colour correction, ii) direct calibration, reasoned dilution but no colour correction, iii) direct calibration, 1:2 dilution, no colour correction, iv) indirect calibration and v) dilution method. Our results concur that the interference caused by the co-extracted compounds is not related simply to either the colour of the extracts or total soil organic matter content. These findings suggest that for improved accuracy of GRSP estimates using the Bradford method, extracts should be diluted, and the pH-specific absorbance of coloured extracts should be subtracted.
•Bradford assay to quantify soil proteins in autoclaved-citrate extracts is subject to interference.•Analysis of GRSP from organic-rich, highly coloured, forest soils is particularly challenging.•Sample dilution and subtraction of pH-dependent colour improve protein determination. Glomalin-related soil protein (GRSP) is thought to represent a fraction of recalcitrant organic matter in soil. But it is recognized that the autoclaved-citrate extraction procedure causes the co-extraction of humic substances which interfere (directly and indirectly) with the Bradford colorimetric assay. The aim of this work was to propose a reliable quantification method of GRSP from forest soil, very rich in organic matter and therefore in colour. We estimated the quantities of GRSP in the topsoil (0–10 cm) of 102 French forests using five methods: i) direct calibration, reasoned dilution with colour correction, ii) direct calibration, reasoned dilution but no colour correction, iii) direct calibration, 1:2 dilution, no colour correction, iv) indirect calibration and v) dilution method. Our results concur that the interference caused by the co-extracted compounds is not related simply to either the colour of the extracts or total soil organic matter content. These findings suggest that for improved accuracy of GRSP estimates using the Bradford method, extracts should be diluted, and the pH-specific absorbance of coloured extracts should be subtracted.
ArticleNumber 114394
Author Cissé, G.
Nicolas, M.
Staunton, S.
Essi, M.
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Keywords Forest soils, Autoclaved-citrate extractable protein
Coloured extracts
Quantification of GRSP
Humic substances
Autoclaved-citrate extractable protein
Forest soils
Language English
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Snippet •Bradford assay to quantify soil proteins in autoclaved-citrate extracts is subject to interference.•Analysis of GRSP from organic-rich, highly coloured,...
Glomalin-related soil protein (GRSP) is thought to represent a fraction of recalcitrant organic matter in soil. But it is recognized that the...
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StartPage 114394
SubjectTerms absorbance
Agricultural sciences
color
colorimetry
Coloured extracts
Earth Sciences
forest soils
Forest soils, Autoclaved-citrate extractable protein
forests
Geochemistry
Humic substances
Life Sciences
Quantification of GRSP
Sciences of the Universe
Silviculture, forestry
soil organic matter
Soil study
topsoil
Title Bradford quantification of Glomalin-Related Soil Protein in coloured extracts of forest soils
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