Differential diagnosis of orf viruses by a single-step PCR

The complete nucleotide sequence of the A32L gene (named after vaccinia virus, corresponding with open reading frame 108 of the orf virus and encoding an ATPase) of the orf virus was studied using samples of orf virus from infected goats, which were collected from six outbreaks in central Taiwan. DN...

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Published in	Journal of virological methods Vol. 160; no. 1-2; pp. 85 - 89
Main Authors	Chan, Kun-Wei, Hsu, Wei-Li, Wang, Chi-Young, Yang, Cheng-Hsiung, Lin, Fong-Yuan, Chulakasian, Songkhla, Wong, Min-Liang
Format	Journal Article
Language	English
Published	Kidlington Elsevier B.V 01.09.2009 Elsevier
Subjects	Adenosine Triphosphatases - genetics Animal viral diseases Animals Base Sequence Biological and medical sciences Diagnosis Diagnosis, Differential Disease Outbreaks Ecthyma, Contagious - diagnosis Ecthyma, Contagious - epidemiology Ecthyma, Contagious - virology Fundamental and applied biological sciences. Psychology Genotype Goats Infectious diseases Medical sciences Microbiology Molecular Sequence Data Orf virus Orf virus - classification Orf virus - genetics Orf virus - isolation & purification PCR Polymerase Chain Reaction - methods Polymorphism, Genetic Sequence Alignment Sequence Analysis, DNA Taiwan Techniques used in virology Vaccinia virus Viral diseases Viral Proteins - genetics Virology Taiwan PCR Orf virus Diagnosis Chordopoxvirinae Skin disease Farming animal Microbiology Pustulosis dermatosis Infection Virus Polymerase chain reaction Vertebrata Mammalia Poxviridae Viral disease Contagious pustular dermatitides Goat Artiodactyla Orfvirus Veterinary Ungulata Parapoxvirus
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Abstract	The complete nucleotide sequence of the A32L gene (named after vaccinia virus, corresponding with open reading frame 108 of the orf virus and encoding an ATPase) of the orf virus was studied using samples of orf virus from infected goats, which were collected from six outbreaks in central Taiwan. DNA sequence analysis of the A32L genes of these and isolates from other countries showed sequence heterogeneity (base pair variation and deletion) in the 3′-terminal regions. This finding led to the development of a polymerase chain reaction (PCR) method for the rapid differential diagnosis of orf virus infections, and the results demonstrated that this was an easy and reliable method for genotyping of orf viruses.
AbstractList	The complete nucleotide sequence of the A32L gene (named after vaccinia virus, corresponding with open reading frame 108 of the orf virus and encoding an ATPase) of the orf virus was studied using samples of orf virus from infected goats, which were collected from six outbreaks in central Taiwan. DNA sequence analysis of the A32L genes of these and isolates from other countries showed sequence heterogeneity (base pair variation and deletion) in the 3'-terminal regions. This finding led to the development of a polymerase chain reaction (PCR) method for the rapid differential diagnosis of orf virus infections, and the results demonstrated that this was an easy and reliable method for genotyping of orf viruses. The complete nucleotide sequence of the A32L gene (named after vaccinia virus, corresponding with open reading frame 108 of the orf virus and encoding an ATPase) of the orf virus was studied using samples of orf virus from infected goats, which were collected from six outbreaks in central Taiwan. DNA sequence analysis of the A32L genes of these and isolates from other countries showed sequence heterogeneity (base pair variation and deletion) in the 3'-terminal regions. This finding led to the development of a polymerase chain reaction (PCR) method for the rapid differential diagnosis of orf virus infections, and the results demonstrated that this was an easy and reliable method for genotyping of orf viruses.The complete nucleotide sequence of the A32L gene (named after vaccinia virus, corresponding with open reading frame 108 of the orf virus and encoding an ATPase) of the orf virus was studied using samples of orf virus from infected goats, which were collected from six outbreaks in central Taiwan. DNA sequence analysis of the A32L genes of these and isolates from other countries showed sequence heterogeneity (base pair variation and deletion) in the 3'-terminal regions. This finding led to the development of a polymerase chain reaction (PCR) method for the rapid differential diagnosis of orf virus infections, and the results demonstrated that this was an easy and reliable method for genotyping of orf viruses.
Author	Hsu, Wei-Li Lin, Fong-Yuan Wong, Min-Liang Wang, Chi-Young Chulakasian, Songkhla Yang, Cheng-Hsiung Chan, Kun-Wei
Author_xml	– sequence: 1 givenname: Kun-Wei surname: Chan fullname: Chan, Kun-Wei organization: Department of Veterinary Medicine, College of Veterinary Medicine, National Chung-Hsing University, Taichung 402, Taiwan – sequence: 2 givenname: Wei-Li surname: Hsu fullname: Hsu, Wei-Li organization: Graduate Institute of Microbiology and Public Health, College of Veterinary Medicine, National Chung-Hsing University, Taichung 402, Taiwan – sequence: 3 givenname: Chi-Young surname: Wang fullname: Wang, Chi-Young organization: Department of Veterinary Medicine, College of Veterinary Medicine, National Chung-Hsing University, Taichung 402, Taiwan – sequence: 4 givenname: Cheng-Hsiung surname: Yang fullname: Yang, Cheng-Hsiung organization: Livestock Disease Control Center of Taichung County, Taichung, Taiwan – sequence: 5 givenname: Fong-Yuan surname: Lin fullname: Lin, Fong-Yuan organization: Department of Veterinary Medicine, College of Veterinary Medicine, National Chung-Hsing University, Taichung 402, Taiwan – sequence: 6 givenname: Songkhla surname: Chulakasian fullname: Chulakasian, Songkhla organization: Department of Veterinary Medicine, College of Veterinary Medicine, National Chung-Hsing University, Taichung 402, Taiwan – sequence: 7 givenname: Min-Liang surname: Wong fullname: Wong, Min-Liang email: mlwong@dragon.nchu.edu.tw organization: Department of Veterinary Medicine, College of Veterinary Medicine, National Chung-Hsing University, Taichung 402, Taiwan
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Cites_doi	10.1006/viro.1995.1217 10.1016/j.gene.2008.10.029 10.1016/S1386-6532(03)00084-2 10.1136/vr.141.6.150 10.1023/A:1026431704679 10.1046/j.1439-0450.2002.00539.x 10.1073/pnas.89.11.4825 10.1016/S0378-1135(99)00151-0 10.1136/vr.125.16.419 10.1128/JVI.72.7.5769-5780.1998 10.1128/JVI.78.1.168-177.2004 10.1016/S0166-0934(99)00144-5 10.1074/jbc.272.51.32042 10.1111/j.1863-2378.2007.01046.x 10.1016/j.jviromet.2005.12.005 10.1111/j.1600-0560.1975.tb00179.x 10.1016/j.virusres.2005.09.011 10.1093/nar/22.22.4673 10.1007/BF01702351 10.1006/viro.1994.1420 10.1046/j.1365-2567.1998.00438.x 10.1016/S1386-6532(01)00232-3 10.1053/tvjl.1999.0426 10.1007/s11262-007-0144-6
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Keywords	PCR Orf virus Diagnosis Chordopoxvirinae Skin disease Farming animal Microbiology Pustulosis dermatosis Infection Virus Polymerase chain reaction Vertebrata Mammalia Poxviridae Viral disease Contagious pustular dermatitides Goat Artiodactyla Orfvirus Veterinary Ungulata Parapoxvirus
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References	Johannessen, Krogh, Solberg, Dalen, van Wijngaarden, Johansen (bib13) 1975; 2 McInnes, Wood, Mercer (bib20) 1998; 17 Thompson, Higgins, Gibson (bib25) 1994; 22 Gumbrell, McGregor (bib8) 1997; 141 Reid (bib22) 1991 Torfason, Gunadottir (bib26) 2002; 24 Haig, McInnes, Thomson, Wood, Bunyan, Mercer (bib10) 1998; 93 Delhon, Tulman, Afonso, Lu, de la Concha-Bermejillo, Lehmkuhl, Piccone, Kutish, Rock (bib7) 2004; 78 Kottaridi, Nomikou, Lelli, Markoulatos, Mangana (bib17) 2006; 134 Cassetti, Merchlinsky, Wolffe, Weisberg, Moss (bib3) 1998; 72 Kainz (bib14) 2000; 1494 Kirschberg, Schüttler, Repp, Schaefer (bib15) 2004; 29 Chan, Yang, Lin, Wang, Lin, Kuo, Wong, Hsu (bib5) 2009; 432 Mercer, Ueda, Friederichs, Hofmann, Fraser, Bateman, Fleming (bib21) 2006; 116 Chan, Lin, Lee, Liao, Tsai, Hsu, Wong, Shih (bib4) 2007; 35 Yeruham, Perl, Abraham (bib27) 2000; 160 Hosamani, Yadav, Kallesh, Mondal, Bhanuprakash, Singh (bib11) 2007; 54 Robinson, Mercer (bib23) 1995; 208 Baek, Kwak, Lee, Lee, Ryu, Uhlinger, Lambeth (bib1) 1997; 272 Büttner, Rziha (bib2) 2002; 49 Haig, Mercer (bib9) 1998; 29 Koonin, Senkevich, Chernos (bib16) 1993; 7 Chang, Watson, Jacobs (bib6) 1992; 89 Mazur, Ferreira, Rangel Filho, Galler (bib19) 2000; 73 Inoshima, Morooka, Sentsui (bib12) 2000; 84 Sullivan, Mercer, Fleming, Robinson (bib24) 1994; 202 Mazur, Machado (bib18) 1989; 125 Sullivan (10.1016/j.jviromet.2009.04.025_bib24) 1994; 202 Inoshima (10.1016/j.jviromet.2009.04.025_bib12) 2000; 84 Haig (10.1016/j.jviromet.2009.04.025_bib10) 1998; 93 Yeruham (10.1016/j.jviromet.2009.04.025_bib27) 2000; 160 Cassetti (10.1016/j.jviromet.2009.04.025_bib3) 1998; 72 Delhon (10.1016/j.jviromet.2009.04.025_bib7) 2004; 78 Kirschberg (10.1016/j.jviromet.2009.04.025_bib15) 2004; 29 Kainz (10.1016/j.jviromet.2009.04.025_bib14) 2000; 1494 Haig (10.1016/j.jviromet.2009.04.025_bib9) 1998; 29 Reid (10.1016/j.jviromet.2009.04.025_bib22) 1991 Thompson (10.1016/j.jviromet.2009.04.025_bib25) 1994; 22 Mercer (10.1016/j.jviromet.2009.04.025_bib21) 2006; 116 Kottaridi (10.1016/j.jviromet.2009.04.025_bib17) 2006; 134 Baek (10.1016/j.jviromet.2009.04.025_bib1) 1997; 272 McInnes (10.1016/j.jviromet.2009.04.025_bib20) 1998; 17 Chan (10.1016/j.jviromet.2009.04.025_bib4) 2007; 35 Gumbrell (10.1016/j.jviromet.2009.04.025_bib8) 1997; 141 Koonin (10.1016/j.jviromet.2009.04.025_bib16) 1993; 7 Mazur (10.1016/j.jviromet.2009.04.025_bib19) 2000; 73 Hosamani (10.1016/j.jviromet.2009.04.025_bib11) 2007; 54 Büttner (10.1016/j.jviromet.2009.04.025_bib2) 2002; 49 Mazur (10.1016/j.jviromet.2009.04.025_bib18) 1989; 125 Johannessen (10.1016/j.jviromet.2009.04.025_bib13) 1975; 2 Chang (10.1016/j.jviromet.2009.04.025_bib6) 1992; 89 Robinson (10.1016/j.jviromet.2009.04.025_bib23) 1995; 208 Chan (10.1016/j.jviromet.2009.04.025_bib5) 2009; 432 Torfason (10.1016/j.jviromet.2009.04.025_bib26) 2002; 24
References_xml	– volume: 272 start-page: 32042 year: 1997 end-page: 32049 ident: bib1 article-title: Lipase activities of p37, the major envelope protein of vaccinia virus publication-title: J. Biol. Chem. – volume: 35 start-page: 705 year: 2007 end-page: 712 ident: bib4 article-title: Identification and phylogenetic analysis of orf virus from goats in Taiwan publication-title: Virus Genes – volume: 78 start-page: 168 year: 2004 end-page: 177 ident: bib7 article-title: Genomes of the parapoxviruses ORF virus and bovine papular stomatitis virus publication-title: J. Virol. – volume: 73 start-page: 253 year: 2000 end-page: 259 ident: bib19 article-title: Molecular characterization of Brazilian isolates of orf virus publication-title: Vet. Microbiol. – volume: 93 start-page: 335 year: 1998 end-page: 340 ident: bib10 article-title: The orf virus OV20.0L gene product is involved in interferon resistance and inhibits an interferon-inducible, double-stranded RNA-dependent kinase publication-title: Immunology – volume: 89 start-page: 4825 year: 1992 end-page: 4829 ident: bib6 article-title: The E3L gene of vaccinia virus encodes an inhibitor of the interferon-induced, double-stranded RNA-dependent protein kinase publication-title: Proc. Natl. Acad. Sci. U.S.A. – volume: 160 start-page: 74 year: 2000 end-page: 76 ident: bib27 article-title: Orf infection in four sheep flocks publication-title: Vet. J. – volume: 134 start-page: 119 year: 2006 end-page: 124 ident: bib17 article-title: Laboratory diagnosis of contagious ecthyma: comparison of different PCR protocols with virus isolation in cell culture publication-title: J. Virol. Methods – volume: 125 start-page: 419 year: 1989 end-page: 420 ident: bib18 article-title: Detection of contagious pustular dermatitis virus of goats in a severe outbreak publication-title: Vet. Rec. – volume: 1494 start-page: 23 year: 2000 end-page: 27 ident: bib14 article-title: The PCR plateau phase-towards an understanding of its limitations publication-title: Biochem. Biophys. Acta – volume: 432 start-page: 44 year: 2009 end-page: 53 ident: bib5 article-title: Phylogenetic analysis of parapoxviruses and the C-terminal heterogeneity of viral ATPase proteins publication-title: Gene – volume: 29 start-page: 39 year: 2004 end-page: 43 ident: bib15 article-title: A multiplex-PCR to identify hepatitis B virus—enotypes A–F publication-title: J. Clin. Virol. – volume: 24 start-page: 79 year: 2002 end-page: 84 ident: bib26 article-title: Polymerase chain reaction for laboratory diagnosis of orf virus infections publication-title: J. Clin. Virol. – volume: 84 start-page: 201 year: 2000 end-page: 208 ident: bib12 article-title: Detection and diagnosis of parapoxvirus by the polymerase chain reaction publication-title: J. Virol. Methods – volume: 208 start-page: 812 year: 1995 end-page: 815 ident: bib23 article-title: Parapoxvirus of red deer: evidence for its inclusion as a new member in the genus parapoxvirus publication-title: Virology – volume: 49 start-page: 7 year: 2002 end-page: 16 ident: bib2 article-title: Parapoxviruses: from the lesion to the viral genome publication-title: J. Vet. Med. B. Infect. Dis. Vet. Public Health – volume: 22 start-page: 4673 year: 1994 end-page: 4680 ident: bib25 article-title: Improved sensitivity of profile searches through the use of sequence weights and gap excision publication-title: Nucl. Acids Res. – volume: 29 start-page: 311 year: 1998 end-page: 326 ident: bib9 publication-title: Orf. Vet. Res. – volume: 54 start-page: 204 year: 2007 end-page: 208 ident: bib11 article-title: Isolation and characterization of an Indian orf virus from goats publication-title: Zoonoses Public Health – volume: 72 start-page: 5769 year: 1998 end-page: 5780 ident: bib3 article-title: DNA packaging mutant: repression of the vaccinia virus A32 gene results in noninfectious, DNA-deficient, spherical, enveloped particles publication-title: J. Virol. – volume: 116 start-page: 146 year: 2006 end-page: 158 ident: bib21 article-title: Comparative analysis of genome sequences of three isolates of orf virus reveals unexpected sequence variation publication-title: Virus Res. – volume: 2 start-page: 265 year: 1975 end-page: 283 ident: bib13 article-title: Human orf publication-title: J. Cutan. Pathol. – volume: 17 start-page: 107 year: 1998 end-page: 115 ident: bib20 article-title: Orf virus encodes a homolog of the vaccinia virus interferon-resistance gene E3L publication-title: Virus Genes – volume: 202 start-page: 968 year: 1994 end-page: 973 ident: bib24 article-title: Identification and characterization of an orf virus homologue of the vaccinia virus gene encoding the major envelope antigen p37K publication-title: Virology – start-page: 265 year: 1991 end-page: 269 ident: bib22 article-title: ORF publication-title: Disease of Sheep – volume: 7 start-page: 89 year: 1993 end-page: 94 ident: bib16 article-title: Gene A32 product of vaccinia virus may be an ATPase involved in viral DNA packaging as indicated by sequence comparisons with other putative viral ATPases publication-title: Virus Genes – volume: 141 start-page: 150 year: 1997 end-page: 151 ident: bib8 article-title: Outbreak of severe fatal orf in lambs publication-title: Vet. Rec. – volume: 208 start-page: 812 year: 1995 ident: 10.1016/j.jviromet.2009.04.025_bib23 article-title: Parapoxvirus of red deer: evidence for its inclusion as a new member in the genus parapoxvirus publication-title: Virology doi: 10.1006/viro.1995.1217 – volume: 432 start-page: 44 year: 2009 ident: 10.1016/j.jviromet.2009.04.025_bib5 article-title: Phylogenetic analysis of parapoxviruses and the C-terminal heterogeneity of viral ATPase proteins publication-title: Gene doi: 10.1016/j.gene.2008.10.029 – volume: 1494 start-page: 23 year: 2000 ident: 10.1016/j.jviromet.2009.04.025_bib14 article-title: The PCR plateau phase-towards an understanding of its limitations publication-title: Biochem. Biophys. Acta – volume: 29 start-page: 39 year: 2004 ident: 10.1016/j.jviromet.2009.04.025_bib15 article-title: A multiplex-PCR to identify hepatitis B virus—enotypes A–F publication-title: J. Clin. Virol. doi: 10.1016/S1386-6532(03)00084-2 – volume: 141 start-page: 150 year: 1997 ident: 10.1016/j.jviromet.2009.04.025_bib8 article-title: Outbreak of severe fatal orf in lambs publication-title: Vet. Rec. doi: 10.1136/vr.141.6.150 – volume: 17 start-page: 107 year: 1998 ident: 10.1016/j.jviromet.2009.04.025_bib20 article-title: Orf virus encodes a homolog of the vaccinia virus interferon-resistance gene E3L publication-title: Virus Genes doi: 10.1023/A:1026431704679 – volume: 49 start-page: 7 year: 2002 ident: 10.1016/j.jviromet.2009.04.025_bib2 article-title: Parapoxviruses: from the lesion to the viral genome publication-title: J. Vet. Med. B. Infect. Dis. Vet. Public Health doi: 10.1046/j.1439-0450.2002.00539.x – volume: 89 start-page: 4825 year: 1992 ident: 10.1016/j.jviromet.2009.04.025_bib6 article-title: The E3L gene of vaccinia virus encodes an inhibitor of the interferon-induced, double-stranded RNA-dependent protein kinase publication-title: Proc. Natl. Acad. Sci. U.S.A. doi: 10.1073/pnas.89.11.4825 – volume: 73 start-page: 253 year: 2000 ident: 10.1016/j.jviromet.2009.04.025_bib19 article-title: Molecular characterization of Brazilian isolates of orf virus publication-title: Vet. Microbiol. doi: 10.1016/S0378-1135(99)00151-0 – volume: 125 start-page: 419 year: 1989 ident: 10.1016/j.jviromet.2009.04.025_bib18 article-title: Detection of contagious pustular dermatitis virus of goats in a severe outbreak publication-title: Vet. Rec. doi: 10.1136/vr.125.16.419 – volume: 72 start-page: 5769 year: 1998 ident: 10.1016/j.jviromet.2009.04.025_bib3 article-title: DNA packaging mutant: repression of the vaccinia virus A32 gene results in noninfectious, DNA-deficient, spherical, enveloped particles publication-title: J. Virol. doi: 10.1128/JVI.72.7.5769-5780.1998 – volume: 78 start-page: 168 year: 2004 ident: 10.1016/j.jviromet.2009.04.025_bib7 article-title: Genomes of the parapoxviruses ORF virus and bovine papular stomatitis virus publication-title: J. Virol. doi: 10.1128/JVI.78.1.168-177.2004 – volume: 84 start-page: 201 year: 2000 ident: 10.1016/j.jviromet.2009.04.025_bib12 article-title: Detection and diagnosis of parapoxvirus by the polymerase chain reaction publication-title: J. Virol. Methods doi: 10.1016/S0166-0934(99)00144-5 – volume: 272 start-page: 32042 year: 1997 ident: 10.1016/j.jviromet.2009.04.025_bib1 article-title: Lipase activities of p37, the major envelope protein of vaccinia virus publication-title: J. Biol. Chem. doi: 10.1074/jbc.272.51.32042 – start-page: 265 year: 1991 ident: 10.1016/j.jviromet.2009.04.025_bib22 article-title: ORF – volume: 54 start-page: 204 year: 2007 ident: 10.1016/j.jviromet.2009.04.025_bib11 article-title: Isolation and characterization of an Indian orf virus from goats publication-title: Zoonoses Public Health doi: 10.1111/j.1863-2378.2007.01046.x – volume: 134 start-page: 119 year: 2006 ident: 10.1016/j.jviromet.2009.04.025_bib17 article-title: Laboratory diagnosis of contagious ecthyma: comparison of different PCR protocols with virus isolation in cell culture publication-title: J. Virol. Methods doi: 10.1016/j.jviromet.2005.12.005 – volume: 2 start-page: 265 year: 1975 ident: 10.1016/j.jviromet.2009.04.025_bib13 article-title: Human orf publication-title: J. Cutan. Pathol. doi: 10.1111/j.1600-0560.1975.tb00179.x – volume: 116 start-page: 146 year: 2006 ident: 10.1016/j.jviromet.2009.04.025_bib21 article-title: Comparative analysis of genome sequences of three isolates of orf virus reveals unexpected sequence variation publication-title: Virus Res. doi: 10.1016/j.virusres.2005.09.011 – volume: 22 start-page: 4673 year: 1994 ident: 10.1016/j.jviromet.2009.04.025_bib25 article-title: Improved sensitivity of profile searches through the use of sequence weights and gap excision publication-title: Nucl. Acids Res. doi: 10.1093/nar/22.22.4673 – volume: 29 start-page: 311 year: 1998 ident: 10.1016/j.jviromet.2009.04.025_bib9 publication-title: Orf. Vet. Res. – volume: 7 start-page: 89 year: 1993 ident: 10.1016/j.jviromet.2009.04.025_bib16 article-title: Gene A32 product of vaccinia virus may be an ATPase involved in viral DNA packaging as indicated by sequence comparisons with other putative viral ATPases publication-title: Virus Genes doi: 10.1007/BF01702351 – volume: 202 start-page: 968 year: 1994 ident: 10.1016/j.jviromet.2009.04.025_bib24 article-title: Identification and characterization of an orf virus homologue of the vaccinia virus gene encoding the major envelope antigen p37K publication-title: Virology doi: 10.1006/viro.1994.1420 – volume: 93 start-page: 335 year: 1998 ident: 10.1016/j.jviromet.2009.04.025_bib10 article-title: The orf virus OV20.0L gene product is involved in interferon resistance and inhibits an interferon-inducible, double-stranded RNA-dependent kinase publication-title: Immunology doi: 10.1046/j.1365-2567.1998.00438.x – volume: 24 start-page: 79 year: 2002 ident: 10.1016/j.jviromet.2009.04.025_bib26 article-title: Polymerase chain reaction for laboratory diagnosis of orf virus infections publication-title: J. Clin. Virol. doi: 10.1016/S1386-6532(01)00232-3 – volume: 160 start-page: 74 year: 2000 ident: 10.1016/j.jviromet.2009.04.025_bib27 article-title: Orf infection in four sheep flocks publication-title: Vet. J. doi: 10.1053/tvjl.1999.0426 – volume: 35 start-page: 705 year: 2007 ident: 10.1016/j.jviromet.2009.04.025_bib4 article-title: Identification and phylogenetic analysis of orf virus from goats in Taiwan publication-title: Virus Genes doi: 10.1007/s11262-007-0144-6
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Snippet	The complete nucleotide sequence of the A32L gene (named after vaccinia virus, corresponding with open reading frame 108 of the orf virus and encoding an...
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SubjectTerms	Adenosine Triphosphatases - genetics Animal viral diseases Animals Base Sequence Biological and medical sciences Diagnosis Diagnosis, Differential Disease Outbreaks Ecthyma, Contagious - diagnosis Ecthyma, Contagious - epidemiology Ecthyma, Contagious - virology Fundamental and applied biological sciences. Psychology Genotype Goats Infectious diseases Medical sciences Microbiology Molecular Sequence Data Orf virus Orf virus - classification Orf virus - genetics Orf virus - isolation & purification PCR Polymerase Chain Reaction - methods Polymorphism, Genetic Sequence Alignment Sequence Analysis, DNA Taiwan Techniques used in virology Vaccinia virus Viral diseases Viral Proteins - genetics Virology
Title	Differential diagnosis of orf viruses by a single-step PCR
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